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AFF1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near AFF1
chr4:86,835,001..87,241,054, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr4_86935888_C_A | chr4:86935888 | 0.381 | 0.421 | 0.400 | — |
| chr4_86935909_C_G | chr4:86935909 | -0.343 | -0.162 | -0.188 | — |
| chr4_86935901_C_T | chr4:86935901 | 0.336 | 0.218 | 0.200 | — |
| chr4_86935944_G_C | chr4:86935944 | 0.326 | 0.218 | 0.271 | — |
| chr4_87033905_C_T | chr4:87033905 | 0.282 | 0.192 | 0.203 | — |
| chr4_86935913_A_G | chr4:86935913 | 0.276 | 0.129 | 0.200 | — |
| chr4_86935880_G_A | chr4:86935880 | -0.170 | -0.043 | -0.459 | — |
| chr4_86935945_A_G | chr4:86935945 | -0.243 | -0.119 | -0.094 | — |
| chr4_86935943_C_A | chr4:86935943 | -0.235 | -0.124 | -0.212 | — |
| chr4_87033902_C_G | chr4:87033902 | 0.230 | 0.143 | 0.188 | — |
| chr4_86935685_C_A | chr4:86935685 | 0.226 | 0.005 | 0.106 | — |
| chr4_86935921_A_G | chr4:86935921 | 0.226 | 0.084 | 0.259 | — |
| chr4_86935929_A_C | chr4:86935929 | 0.226 | 0.107 | 0.341 | — |
| chr4_86935945_A_C | chr4:86935945 | -0.226 | -0.094 | 0.059 | — |
| chr4_86935942_G_T | chr4:86935942 | -0.223 | -0.127 | -0.212 | — |
| chr4_86935909_C_A | chr4:86935909 | -0.220 | -0.117 | -0.224 | — |
| chr4_86935912_C_G | chr4:86935912 | -0.220 | -0.107 | -0.153 | — |
| chr4_87033923_G_C | chr4:87033923 | 0.220 | 0.126 | 0.206 | — |
| chr4_87033938_G_A | chr4:87033938 | 0.217 | 0.131 | 0.215 | — |
| chr4_86935887_C_A | chr4:86935887 | 0.215 | 0.221 | 0.341 | — |
| chr4_87033902_C_A | chr4:87033902 | 0.214 | 0.138 | 0.174 | — |
| chr4_86935943_C_G | chr4:86935943 | -0.213 | -0.170 | -0.071 | — |
| chr4_86935906_C_T | chr4:86935906 | 0.208 | 0.147 | 0.141 | — |
| chr4_86935883_T_G | chr4:86935883 | -0.203 | -0.086 | -0.047 | — |
| chr4_86935943_C_T | chr4:86935943 | -0.203 | -0.119 | -0.129 | — |
| chr4_87033913_C_T | chr4:87033913 | 0.201 | 0.142 | 0.147 | — |
| chr4_86935932_G_C | chr4:86935932 | -0.198 | -0.086 | -0.188 | — |
| chr4_86935942_G_C | chr4:86935942 | -0.188 | -0.094 | -0.153 | — |
| chr4_86935826_A_T | chr4:86935826 | 0.186 | 0.147 | 0.247 | — |
| chr4_86935846_T_G | chr4:86935846 | 0.186 | 0.147 | 0.094 | — |
| chr4_86935898_G_T | chr4:86935898 | -0.043 | -0.084 | -0.329 | — |
| chr4_86935921_A_C | chr4:86935921 | 0.186 | 0.071 | 0.188 | — |
| chr4_86935910_C_G | chr4:86935910 | 0.183 | -0.013 | -0.071 | — |
| chr4_86935944_G_T | chr4:86935944 | -0.183 | -0.102 | -0.071 | — |
| chr4_86935691_G_A | chr4:86935691 | 0.181 | 0.020 | 0.129 | <0.001% |
| chr4_87033930_T_C | chr4:87033930 | 0.181 | 0.145 | 0.138 | — |
| chr4_86935888_C_T | chr4:86935888 | 0.176 | 0.135 | 0.153 | — |
| chr4_86935914_C_T | chr4:86935914 | -0.176 | -0.117 | -0.247 | — |
| chr4_86935940_C_A | chr4:86935940 | -0.176 | -0.091 | -0.129 | — |
| chr4_86935812_A_C | chr4:86935812 | 0.116 | 0.216 | 0.306 | — |
| chr4_86935879_C_A | chr4:86935879 | -0.156 | -0.074 | -0.294 | — |
| chr4_86935890_T_A | chr4:86935890 | 0.166 | 0.178 | 0.235 | — |
| chr4_86935916_C_A | chr4:86935916 | -0.166 | -0.096 | -0.247 | — |
| chr4_87033938_G_T | chr4:87033938 | 0.166 | 0.085 | 0.124 | — |
| chr4_86935947_T_G | chr4:86935947 | -0.163 | -0.099 | -0.047 | — |
| chr4_86935913_A_C | chr4:86935913 | -0.116 | -0.025 | -0.282 | — |
| chr4_86935947_T_A | chr4:86935947 | -0.160 | -0.074 | -0.094 | — |
| chr4_86935757_C_G | chr4:86935757 | -0.158 | -0.036 | -0.235 | — |
| chr4_86935941_A_T | chr4:86935941 | -0.156 | -0.086 | 0.082 | <0.001% |
| chr4_86935948_G_C | chr4:86935948 | 0.156 | 0.117 | 0.059 | — |
| chr4_86935729_T_A | chr4:86935729 | -0.013 | 0.043 | 0.271 | — |
| chr4_86935890_T_C | chr4:86935890 | -0.002 | 0.102 | 0.271 | — |
| chr4_86935908_A_G | chr4:86935908 | 0.153 | 0.058 | 0.235 | — |
| chr4_86935916_C_G | chr4:86935916 | -0.151 | -0.066 | -0.094 | — |
| chr4_86935890_T_G | chr4:86935890 | 0.150 | 0.104 | 0.259 | — |
| chr4_86935907_A_G | chr4:86935907 | -0.148 | -0.063 | 0.129 | — |
| chr4_86935677_G_T | chr4:86935677 | 0.053 | 0.145 | 0.259 | — |
| chr4_86935731_G_T | chr4:86935731 | 0.003 | -0.025 | -0.259 | 0.0046% |
| chr4_86935889_A_G | chr4:86935889 | 0.103 | 0.112 | 0.259 | — |
| chr4_86935915_C_G | chr4:86935915 | -0.146 | -0.043 | 0.024 | — |
| chr4_86935939_C_A | chr4:86935939 | -0.146 | -0.058 | -0.153 | — |
| chr4_86935924_G_T | chr4:86935924 | 0.143 | 0.086 | 0.059 | — |
| chr4_86935941_A_C | chr4:86935941 | -0.143 | -0.066 | 0.000 | — |
| chr4_86935900_C_T | chr4:86935900 | -0.141 | -0.084 | -0.200 | <0.001% |
| chr4_86935718_C_A | chr4:86935718 | 0.140 | 0.043 | 0.082 | — |
| chr4_86935819_G_A | chr4:86935819 | -0.095 | -0.013 | -0.247 | — |
| chr4_86935918_C_T | chr4:86935918 | -0.140 | -0.091 | -0.118 | — |
| chr4_86935919_C_T | chr4:86935919 | 0.140 | 0.084 | 0.129 | <0.001% |
| chr4_86935929_A_T | chr4:86935929 | 0.113 | 0.076 | 0.247 | — |
| chr4_86935915_C_A | chr4:86935915 | -0.138 | -0.038 | -0.129 | — |
| chr4_86935934_C_G | chr4:86935934 | -0.138 | -0.023 | 0.059 | 0.206% |
| chr4_86935815_G_T | chr4:86935815 | 0.136 | 0.036 | -0.129 | — |
| chr4_86935741_G_C | chr4:86935741 | 0.043 | 0.033 | 0.235 | — |
| chr4_86935894_C_G | chr4:86935894 | 0.072 | 0.096 | 0.235 | — |
| chr4_86935914_C_A | chr4:86935914 | -0.110 | -0.036 | -0.235 | — |
| chr4_86935922_C_A | chr4:86935922 | -0.133 | -0.076 | -0.212 | — |
| chr4_86935927_C_G | chr4:86935927 | 0.131 | -0.063 | -0.129 | 0.0020% |
| chr4_86935851_A_G | chr4:86935851 | 0.130 | 0.081 | 0.106 | — |
| chr4_86935911_C_A | chr4:86935911 | 0.130 | 0.028 | 0.059 | — |
| chr4_86935930_G_C | chr4:86935930 | -0.130 | -0.046 | -0.118 | — |
| chr4_86935759_G_C | chr4:86935759 | 0.128 | 0.079 | 0.047 | — |
| chr4_86935906_C_A | chr4:86935906 | 0.128 | 0.114 | 0.071 | — |
| chr4_86935920_G_C | chr4:86935920 | -0.128 | -0.023 | -0.071 | — |
| chr4_86935833_T_G | chr4:86935833 | 0.023 | 0.048 | 0.224 | — |
| chr4_86935845_C_G | chr4:86935845 | 0.126 | 0.089 | 0.165 | — |
| chr4_86935886_C_G | chr4:86935886 | 0.077 | 0.104 | 0.224 | — |
| chr4_86935912_C_A | chr4:86935912 | -0.083 | -0.018 | -0.224 | — |
| chr4_86935937_A_C | chr4:86935937 | 0.126 | 0.053 | 0.141 | — |
| chr4_86935909_C_T | chr4:86935909 | -0.125 | -0.109 | -0.153 | — |
| chr4_86935908_A_C | chr4:86935908 | -0.123 | -0.028 | -0.047 | — |
| chr4_86935922_C_G | chr4:86935922 | -0.123 | -0.023 | 0.059 | 0.0013% |
| chr4_86935924_G_C | chr4:86935924 | 0.123 | 0.010 | 0.059 | — |
| chr4_87033906_C_A | chr4:87033906 | 0.121 | 0.082 | 0.094 | — |
| chr4_86935829_C_G | chr4:86935829 | -0.098 | -0.015 | -0.212 | — |
| chr4_86935888_C_G | chr4:86935888 | 0.120 | 0.109 | 0.212 | — |
| chr4_86935904_C_T | chr4:86935904 | 0.120 | 0.036 | -0.059 | — |
| chr4_86935932_G_A | chr4:86935932 | -0.067 | 0.003 | -0.212 | — |
| chr4_86935932_G_T | chr4:86935932 | -0.070 | -0.036 | -0.212 | — |
| chr4_86935761_G_A | chr4:86935761 | 0.116 | 0.091 | -0.012 | — |
| chr4_87033935_C_A | chr4:87033935 | -0.116 | -0.060 | -0.153 | — |
| chr4_87033935_C_G | chr4:87033935 | -0.116 | -0.074 | -0.144 | — |
| chr4_86935856_C_A | chr4:86935856 | 0.115 | 0.041 | 0.024 | — |
| chr4_86935908_A_T | chr4:86935908 | -0.115 | -0.089 | -0.176 | — |
| chr4_86935912_C_T | chr4:86935912 | -0.115 | -0.038 | -0.153 | — |
| chr4_87033940_T_C | chr4:87033940 | -0.115 | -0.076 | -0.071 | — |
| chr4_86935832_C_G | chr4:86935832 | 0.042 | 0.046 | 0.200 | — |
| chr4_86935833_T_A | chr4:86935833 | 0.010 | 0.030 | 0.200 | — |
| chr4_86935891_C_G | chr4:86935891 | 0.113 | 0.074 | 0.200 | — |
| chr4_86935893_T_G | chr4:86935893 | 0.070 | 0.051 | 0.200 | — |
| chr4_86935919_C_A | chr4:86935919 | -0.113 | -0.081 | -0.153 | <0.001% |
| chr4_86935924_G_A | chr4:86935924 | -0.077 | -0.081 | -0.200 | — |
| chr4_86935925_T_C | chr4:86935925 | 0.113 | 0.046 | 0.176 | — |
| chr4_86935946_A_T | chr4:86935946 | -0.113 | -0.071 | -0.059 | — |
| chr4_86935915_C_T | chr4:86935915 | -0.111 | -0.023 | -0.141 | — |
| chr4_87033924_A_T | chr4:87033924 | 0.111 | 0.081 | 0.100 | <0.001% |
| chr4_86935759_G_A | chr4:86935759 | 0.110 | 0.058 | -0.024 | — |
| chr4_86935907_A_C | chr4:86935907 | -0.110 | -0.066 | 0.012 | — |
| chr4_86935945_A_T | chr4:86935945 | -0.110 | -0.061 | 0.024 | — |
| chr4_86935859_T_A | chr4:86935859 | -0.108 | -0.010 | 0.024 | — |
| chr4_87033915_T_C | chr4:87033915 | 0.108 | 0.104 | 0.129 | — |
| chr4_87033940_T_G | chr4:87033940 | -0.107 | -0.075 | -0.062 | — |
| chr4_86935792_A_C | chr4:86935792 | -0.106 | -0.036 | -0.106 | — |
| chr4_86935870_T_G | chr4:86935870 | 0.058 | 0.013 | 0.188 | — |
| chr4_86935874_T_G | chr4:86935874 | 0.073 | 0.091 | 0.188 | — |
| chr4_86935884_G_A | chr4:86935884 | -0.037 | -0.046 | -0.188 | — |
| chr4_86935884_G_C | chr4:86935884 | -0.092 | -0.071 | -0.188 | — |
| chr4_86935884_G_T | chr4:86935884 | -0.002 | -0.008 | -0.188 | — |
| chr4_86935894_C_T | chr4:86935894 | -0.077 | -0.028 | -0.188 | — |
| chr4_86935898_G_A | chr4:86935898 | 0.012 | -0.015 | -0.188 | — |
| chr4_87033940_T_A | chr4:87033940 | -0.106 | -0.081 | -0.094 | — |
| chr4_86935910_C_T | chr4:86935910 | 0.105 | 0.000 | -0.012 | — |
| chr4_87033944_T_A | chr4:87033944 | -0.105 | -0.070 | -0.068 | — |
| chr4_86935930_G_A | chr4:86935930 | -0.103 | -0.041 | -0.165 | — |
| chr4_87033904_A_G | chr4:87033904 | 0.103 | 0.051 | 0.097 | <0.001% |
| chr4_87033916_A_C | chr4:87033916 | 0.101 | 0.077 | 0.088 | — |
| chr4_87033913_C_G | chr4:87033913 | 0.101 | 0.065 | 0.079 | — |
| chr4_86935697_C_T | chr4:86935697 | -0.032 | 0.013 | -0.176 | — |
| chr4_86935726_G_T | chr4:86935726 | -0.032 | -0.020 | -0.176 | — |
| chr4_86935745_G_C | chr4:86935745 | 0.077 | 0.036 | 0.176 | — |
| chr4_86935770_C_A | chr4:86935770 | -0.007 | -0.025 | -0.176 | — |
| chr4_86935771_C_A | chr4:86935771 | 0.018 | -0.028 | -0.176 | — |
| chr4_86935867_G_T | chr4:86935867 | -0.058 | -0.033 | -0.176 | — |
| chr4_86935889_A_C | chr4:86935889 | 0.100 | 0.127 | 0.118 | — |
| chr4_86935910_C_A | chr4:86935910 | 0.070 | -0.058 | -0.176 | — |
| chr4_86935939_C_G | chr4:86935939 | -0.100 | -0.023 | 0.118 | — |
| chr4_87033942_A_T | chr4:87033942 | -0.100 | -0.055 | -0.103 | 0.059% |
| chr4_86935759_G_T | chr4:86935759 | 0.098 | 0.056 | -0.047 | — |
| chr4_86935911_C_T | chr4:86935911 | -0.098 | -0.056 | -0.129 | 0.0026% |
| chr4_86935807_A_C | chr4:86935807 | 0.097 | 0.102 | 0.024 | — |
| chr4_86935813_G_A | chr4:86935813 | -0.097 | -0.041 | 0.035 | — |
| chr4_86935877_C_A | chr4:86935877 | 0.097 | 0.051 | -0.035 | — |
| chr4_86935887_C_T | chr4:86935887 | 0.097 | 0.013 | 0.000 | — |
| chr4_86935936_G_A | chr4:86935936 | -0.097 | -0.013 | -0.118 | — |
| chr4_86935937_A_G | chr4:86935937 | -0.097 | -0.018 | 0.000 | — |
| chr4_86935946_A_C | chr4:86935946 | -0.097 | -0.079 | 0.035 | — |
| chr4_86935895_T_A | chr4:86935895 | -0.095 | -0.056 | -0.106 | — |
| chr4_87033944_T_C | chr4:87033944 | 0.095 | 0.041 | 0.141 | <0.001% |
| chr4_86935716_T_G | chr4:86935716 | 0.052 | 0.018 | 0.165 | — |
| chr4_86935726_G_A | chr4:86935726 | -0.037 | -0.033 | -0.165 | 0.0039% |
| chr4_86935734_G_T | chr4:86935734 | -0.032 | -0.013 | -0.165 | — |
| chr4_86935752_T_C | chr4:86935752 | 0.015 | 0.003 | 0.165 | — |
| chr4_86935757_C_A | chr4:86935757 | -0.053 | 0.003 | -0.165 | — |
| chr4_86935788_A_C | chr4:86935788 | 0.082 | 0.005 | -0.165 | — |
| chr4_86935852_A_G | chr4:86935852 | 0.048 | 0.063 | 0.165 | — |
| chr4_86935856_C_T | chr4:86935856 | -0.003 | -0.020 | -0.165 | — |
| chr4_86935889_A_T | chr4:86935889 | 0.083 | 0.102 | 0.165 | — |
| chr4_86935892_C_T | chr4:86935892 | -0.042 | -0.030 | -0.165 | — |
| chr4_86935933_C_G | chr4:86935933 | 0.087 | 0.046 | 0.165 | — |
| chr4_86935940_C_G | chr4:86935940 | -0.093 | -0.053 | -0.012 | — |
| chr4_87033944_T_G | chr4:87033944 | -0.093 | -0.074 | -0.065 | — |
| chr4_87033936_T_G | chr4:87033936 | -0.092 | -0.043 | -0.065 | — |
| chr4_87033945_A_G | chr4:87033945 | -0.092 | -0.057 | -0.074 | — |
| chr4_86935758_G_A | chr4:86935758 | 0.090 | 0.046 | 0.024 | — |
| chr4_86935900_C_A | chr4:86935900 | 0.090 | 0.033 | -0.012 | — |
| chr4_86935907_A_T | chr4:86935907 | -0.090 | -0.066 | -0.082 | — |
| chr4_86935917_T_A | chr4:86935917 | 0.090 | 0.056 | 0.071 | — |
| chr4_86935918_C_A | chr4:86935918 | -0.090 | -0.053 | -0.047 | — |
| chr4_86935922_C_T | chr4:86935922 | -0.090 | -0.018 | -0.071 | — |
| chr4_86935895_T_G | chr4:86935895 | -0.088 | -0.038 | 0.012 | — |
| chr4_87033916_A_G | chr4:87033916 | 0.088 | 0.080 | 0.112 | — |
| chr4_87033950_C_A | chr4:87033950 | -0.087 | -0.057 | -0.100 | — |
| chr4_86935704_A_C | chr4:86935704 | -0.005 | 0.023 | 0.153 | — |
| chr4_86935709_T_C | chr4:86935709 | 0.003 | 0.023 | 0.153 | — |
| chr4_86935732_C_T | chr4:86935732 | -0.015 | -0.008 | -0.153 | — |
| chr4_86935734_G_A | chr4:86935734 | -0.045 | -0.013 | -0.153 | — |
| chr4_86935736_G_T | chr4:86935736 | 0.015 | -0.038 | -0.153 | — |
| chr4_86935750_C_G | chr4:86935750 | -0.077 | -0.061 | -0.153 | — |
| chr4_86935761_G_C | chr4:86935761 | 0.087 | 0.079 | 0.035 | — |
| chr4_86935763_T_A | chr4:86935763 | 0.087 | 0.086 | -0.082 | <0.001% |
| chr4_86935770_C_T | chr4:86935770 | 0.005 | -0.028 | -0.153 | — |
| chr4_86935843_G_A | chr4:86935843 | 0.087 | 0.051 | 0.047 | — |
| chr4_86935852_A_C | chr4:86935852 | 0.025 | 0.081 | 0.153 | — |
| chr4_86935881_G_C | chr4:86935881 | 0.042 | 0.063 | 0.153 | — |
| chr4_86935898_G_C | chr4:86935898 | 0.022 | -0.025 | -0.153 | — |
| chr4_86935916_C_T | chr4:86935916 | -0.077 | -0.030 | -0.153 | — |
| chr4_86935920_G_A | chr4:86935920 | -0.087 | -0.048 | -0.141 | <0.001% |
| chr4_86935942_G_A | chr4:86935942 | -0.087 | -0.018 | -0.082 | — |
| chr4_86935947_T_C | chr4:86935947 | -0.087 | -0.043 | -0.012 | — |
| chr4_86935948_G_T | chr4:86935948 | -0.087 | -0.102 | -0.106 | — |
| chr4_87033941_A_C | chr4:87033941 | 0.086 | 0.119 | 0.047 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.