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ARLNC1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near ARLNC1
chr16:80,728,734..80,992,596, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr16_80828512_T_C | chr16:80828512 | -0.208 | -0.259 | -0.190 | — |
| chr16_80809524_G_C | chr16:80809524 | 0.170 | 0.181 | 0.356 | 0.0013% |
| chr16_80828508_A_C | chr16:80828508 | 0.157 | 0.221 | 0.185 | — |
| chr16_80747322_C_G | chr16:80747322 | -0.034 | -0.151 | -0.256 | — |
| chr16_80809524_G_T | chr16:80809524 | 0.075 | 0.135 | 0.250 | — |
| chr16_80828512_T_A | chr16:80828512 | -0.139 | -0.180 | -0.138 | — |
| chr16_80809498_G_T | chr16:80809498 | 0.135 | 0.235 | 0.209 | — |
| chr16_80828512_T_G | chr16:80828512 | -0.131 | -0.145 | -0.087 | — |
| chr16_80828518_G_A | chr16:80828518 | -0.126 | -0.129 | -0.107 | 0.0072% |
| chr16_80809498_G_C | chr16:80809498 | 0.119 | 0.169 | 0.118 | — |
| chr16_80828514_C_T | chr16:80828514 | -0.109 | -0.132 | -0.129 | — |
| chr16_80828515_C_G | chr16:80828515 | -0.103 | -0.128 | -0.085 | — |
| chr16_80828505_T_A | chr16:80828505 | 0.102 | 0.180 | 0.143 | <0.001% |
| chr16_80809474_A_C | chr16:80809474 | 0.082 | 0.108 | 0.179 | — |
| chr16_80828513_T_C | chr16:80828513 | -0.099 | -0.160 | -0.126 | — |
| chr16_80828514_C_G | chr16:80828514 | -0.097 | -0.119 | -0.100 | — |
| chr16_80828480_A_G | chr16:80828480 | -0.096 | -0.114 | -0.053 | — |
| chr16_80828518_G_C | chr16:80828518 | -0.092 | -0.089 | -0.057 | — |
| chr16_80809500_G_C | chr16:80809500 | 0.077 | -0.016 | 0.162 | — |
| chr16_80828515_C_A | chr16:80828515 | -0.087 | -0.117 | -0.093 | — |
| chr16_80809555_A_T | chr16:80809555 | -0.007 | 0.015 | 0.153 | — |
| chr16_80828506_A_T | chr16:80828506 | 0.085 | 0.119 | 0.104 | — |
| chr16_80828505_T_C | chr16:80828505 | 0.084 | 0.142 | 0.137 | <0.001% |
| chr16_80828513_T_A | chr16:80828513 | -0.084 | -0.135 | -0.104 | — |
| chr16_80828513_T_G | chr16:80828513 | -0.078 | -0.104 | -0.065 | — |
| chr16_80828507_T_A | chr16:80828507 | 0.071 | 0.124 | 0.076 | — |
| chr16_80828514_C_A | chr16:80828514 | -0.069 | -0.099 | -0.101 | — |
| chr16_80747286_T_C | chr16:80747286 | 0.065 | -0.038 | 0.068 | — |
| chr16_80809501_T_G | chr16:80809501 | -0.024 | -0.011 | -0.115 | — |
| chr16_80809526_C_A | chr16:80809526 | -0.031 | -0.008 | -0.112 | — |
| chr16_80828517_G_C | chr16:80828517 | -0.062 | -0.086 | -0.068 | — |
| chr16_80828482_A_G | chr16:80828482 | -0.061 | -0.081 | -0.034 | — |
| chr16_80809478_A_C | chr16:80809478 | 0.015 | 0.018 | 0.106 | — |
| chr16_80809495_A_T | chr16:80809495 | -0.014 | 0.028 | -0.106 | — |
| chr16_80809503_C_G | chr16:80809503 | 0.060 | 0.072 | 0.021 | — |
| chr16_80809550_T_A | chr16:80809550 | -0.060 | -0.065 | -0.100 | — |
| chr16_80828505_T_G | chr16:80828505 | 0.060 | 0.099 | 0.085 | — |
| chr16_80809499_G_C | chr16:80809499 | 0.039 | -0.003 | 0.103 | <0.001% |
| chr16_80809526_C_G | chr16:80809526 | -0.048 | -0.018 | -0.103 | — |
| chr16_80809546_G_C | chr16:80809546 | -0.033 | -0.036 | -0.103 | — |
| chr16_80828496_T_C | chr16:80828496 | -0.058 | -0.041 | -0.025 | — |
| chr16_80809540_G_T | chr16:80809540 | 0.057 | 0.001 | 0.003 | <0.001% |
| chr16_80828485_T_C | chr16:80828485 | -0.057 | -0.091 | -0.035 | — |
| chr16_80809554_A_G | chr16:80809554 | 0.056 | 0.048 | 0.044 | — |
| chr16_80747317_G_C | chr16:80747317 | 0.017 | -0.005 | 0.097 | — |
| chr16_80809502_G_T | chr16:80809502 | -0.022 | -0.018 | -0.097 | — |
| chr16_80809525_G_A | chr16:80809525 | -0.026 | 0.024 | -0.097 | — |
| chr16_80828511_T_G | chr16:80828511 | -0.055 | -0.043 | -0.025 | — |
| chr16_80747313_G_C | chr16:80747313 | 0.053 | 0.008 | 0.065 | — |
| chr16_80809522_T_C | chr16:80809522 | -0.053 | -0.019 | -0.047 | — |
| chr16_80828481_C_G | chr16:80828481 | -0.053 | -0.038 | -0.018 | — |
| chr16_80828484_G_C | chr16:80828484 | -0.053 | -0.051 | -0.029 | — |
| chr16_80828485_T_A | chr16:80828485 | -0.052 | -0.069 | -0.047 | — |
| chr16_80809479_G_C | chr16:80809479 | 0.007 | 0.003 | 0.091 | — |
| chr16_80809502_G_C | chr16:80809502 | -0.050 | -0.033 | -0.091 | — |
| chr16_80809526_C_T | chr16:80809526 | -0.022 | 0.022 | -0.091 | — |
| chr16_80809543_G_C | chr16:80809543 | 0.045 | 0.090 | 0.091 | — |
| chr16_80828464_C_A | chr16:80828464 | -0.052 | -0.038 | -0.069 | — |
| chr16_80828495_C_A | chr16:80828495 | -0.052 | -0.046 | -0.065 | — |
| chr16_80747319_A_G | chr16:80747319 | -0.014 | -0.005 | -0.088 | — |
| chr16_80809480_G_C | chr16:80809480 | -0.008 | 0.000 | 0.088 | — |
| chr16_80809510_A_G | chr16:80809510 | -0.050 | -0.033 | -0.024 | — |
| chr16_80809522_T_A | chr16:80809522 | -0.050 | -0.018 | -0.050 | — |
| chr16_80828479_C_G | chr16:80828479 | -0.050 | -0.043 | -0.034 | — |
| chr16_80828494_A_G | chr16:80828494 | -0.050 | -0.061 | -0.006 | — |
| chr16_80809550_T_G | chr16:80809550 | -0.049 | -0.053 | -0.068 | — |
| chr16_80809554_A_T | chr16:80809554 | -0.034 | -0.025 | -0.085 | — |
| chr16_80828469_C_A | chr16:80828469 | 0.047 | 0.071 | 0.034 | — |
| chr16_80747289_A_G | chr16:80747289 | 0.009 | -0.010 | 0.082 | — |
| chr16_80747315_A_C | chr16:80747315 | 0.007 | -0.005 | 0.082 | — |
| chr16_80809474_A_G | chr16:80809474 | 0.033 | 0.065 | 0.082 | — |
| chr16_80809478_A_G | chr16:80809478 | -0.011 | 0.014 | -0.082 | — |
| chr16_80809482_T_G | chr16:80809482 | -0.008 | -0.020 | -0.082 | — |
| chr16_80809491_C_T | chr16:80809491 | -0.026 | 0.003 | -0.082 | — |
| chr16_80809550_T_C | chr16:80809550 | -0.040 | -0.051 | -0.082 | 0.0033% |
| chr16_80828478_G_A | chr16:80828478 | 0.046 | 0.036 | 0.012 | — |
| chr16_80809494_G_A | chr16:80809494 | -0.031 | 0.008 | -0.079 | — |
| chr16_80809542_T_G | chr16:80809542 | -0.023 | -0.070 | -0.079 | — |
| chr16_80828509_A_C | chr16:80828509 | -0.045 | -0.071 | -0.006 | — |
| chr16_80809469_C_G | chr16:80809469 | 0.044 | 0.104 | 0.044 | — |
| chr16_80809498_G_A | chr16:80809498 | 0.044 | 0.067 | 0.018 | — |
| chr16_80809520_C_A | chr16:80809520 | 0.044 | 0.027 | 0.065 | — |
| chr16_80828465_T_G | chr16:80828465 | -0.044 | -0.043 | -0.029 | — |
| chr16_80809474_A_T | chr16:80809474 | 0.027 | 0.049 | 0.076 | — |
| chr16_80809495_A_G | chr16:80809495 | -0.011 | 0.004 | -0.076 | — |
| chr16_80828472_G_C | chr16:80828472 | 0.043 | 0.081 | 0.051 | — |
| chr16_80828494_A_T | chr16:80828494 | -0.043 | -0.061 | -0.065 | — |
| chr16_80828508_A_T | chr16:80828508 | 0.043 | 0.056 | 0.047 | — |
| chr16_80828516_A_C | chr16:80828516 | -0.043 | -0.066 | -0.054 | — |
| chr16_80809454_G_A | chr16:80809454 | 0.042 | 0.020 | 0.003 | — |
| chr16_80809514_A_G | chr16:80809514 | -0.042 | -0.010 | -0.024 | — |
| chr16_80809540_G_C | chr16:80809540 | 0.042 | -0.020 | 0.018 | — |
| chr16_80828506_A_G | chr16:80828506 | 0.017 | 0.053 | 0.075 | <0.001% |
| chr16_80747315_A_G | chr16:80747315 | -0.007 | 0.003 | -0.074 | — |
| chr16_80809469_C_A | chr16:80809469 | 0.042 | 0.107 | 0.012 | — |
| chr16_80809493_G_A | chr16:80809493 | -0.021 | 0.014 | -0.074 | — |
| chr16_80809494_G_T | chr16:80809494 | -0.021 | 0.010 | -0.074 | — |
| chr16_80809530_A_T | chr16:80809530 | -0.030 | -0.030 | -0.074 | — |
| chr16_80809549_A_T | chr16:80809549 | -0.027 | -0.009 | -0.074 | — |
| chr16_80809499_G_A | chr16:80809499 | 0.041 | 0.003 | 0.047 | — |
| chr16_80828515_C_T | chr16:80828515 | -0.012 | -0.046 | -0.072 | — |
| chr16_80747310_T_G | chr16:80747310 | 0.012 | -0.003 | 0.071 | — |
| chr16_80747322_C_T | chr16:80747322 | -0.003 | 0.003 | -0.071 | — |
| chr16_80809485_C_G | chr16:80809485 | -0.012 | -0.014 | -0.071 | — |
| chr16_80809502_G_A | chr16:80809502 | -0.017 | -0.013 | -0.071 | — |
| chr16_80809503_C_A | chr16:80809503 | 0.011 | 0.023 | -0.071 | — |
| chr16_80809544_G_T | chr16:80809544 | 0.040 | 0.071 | 0.032 | — |
| chr16_80828466_G_C | chr16:80828466 | -0.040 | -0.041 | -0.006 | — |
| chr16_80828487_C_T | chr16:80828487 | 0.040 | 0.005 | 0.021 | — |
| chr16_80828516_A_G | chr16:80828516 | -0.039 | -0.033 | -0.009 | — |
| chr16_80809496_A_G | chr16:80809496 | -0.023 | 0.013 | -0.068 | <0.001% |
| chr16_80809506_G_A | chr16:80809506 | 0.038 | 0.057 | 0.050 | — |
| chr16_80809514_A_C | chr16:80809514 | -0.038 | 0.008 | -0.029 | — |
| chr16_80809554_A_C | chr16:80809554 | -0.017 | -0.008 | -0.068 | — |
| chr16_80828482_A_T | chr16:80828482 | -0.038 | -0.023 | -0.029 | — |
| chr16_80828502_T_G | chr16:80828502 | 0.032 | 0.053 | 0.068 | — |
| chr16_80828504_A_G | chr16:80828504 | 0.033 | 0.069 | 0.068 | — |
| chr16_80809461_G_C | chr16:80809461 | 0.037 | 0.034 | -0.003 | — |
| chr16_80809491_C_A | chr16:80809491 | -0.037 | -0.014 | -0.062 | — |
| chr16_80809520_C_G | chr16:80809520 | 0.037 | 0.030 | -0.006 | — |
| chr16_80828491_T_G | chr16:80828491 | -0.037 | -0.048 | -0.006 | — |
| chr16_80747322_C_A | chr16:80747322 | -0.002 | 0.003 | -0.065 | — |
| chr16_80809493_G_T | chr16:80809493 | -0.017 | 0.023 | -0.065 | — |
| chr16_80809518_T_G | chr16:80809518 | -0.018 | -0.039 | -0.065 | — |
| chr16_80809552_G_C | chr16:80809552 | -0.031 | -0.009 | -0.065 | — |
| chr16_80828497_G_T | chr16:80828497 | -0.023 | -0.056 | -0.063 | — |
| chr16_80828506_A_C | chr16:80828506 | 0.016 | 0.053 | 0.063 | <0.001% |
| chr16_80747296_A_G | chr16:80747296 | 0.013 | 0.000 | 0.062 | — |
| chr16_80747303_C_T | chr16:80747303 | -0.012 | 0.005 | -0.062 | — |
| chr16_80747304_A_G | chr16:80747304 | 0.008 | -0.005 | 0.062 | — |
| chr16_80747314_G_C | chr16:80747314 | 0.016 | 0.000 | 0.062 | — |
| chr16_80747327_G_C | chr16:80747327 | 0.002 | -0.003 | 0.062 | — |
| chr16_80809450_G_A | chr16:80809450 | 0.035 | 0.088 | 0.003 | — |
| chr16_80809454_G_C | chr16:80809454 | 0.035 | 0.010 | 0.012 | — |
| chr16_80809456_A_C | chr16:80809456 | 0.029 | -0.019 | 0.062 | — |
| chr16_80809472_A_C | chr16:80809472 | 0.001 | -0.013 | 0.062 | — |
| chr16_80809490_A_G | chr16:80809490 | -0.029 | -0.027 | -0.062 | — |
| chr16_80809508_T_C | chr16:80809508 | 0.035 | 0.058 | 0.059 | — |
| chr16_80809540_G_A | chr16:80809540 | 0.035 | 0.014 | 0.059 | — |
| chr16_80828464_C_G | chr16:80828464 | -0.035 | -0.046 | -0.056 | — |
| chr16_80828474_A_C | chr16:80828474 | 0.021 | 0.028 | 0.062 | — |
| chr16_80828482_A_C | chr16:80828482 | -0.035 | -0.025 | -0.015 | — |
| chr16_80828496_T_G | chr16:80828496 | -0.035 | -0.023 | 0.006 | — |
| chr16_80809491_C_G | chr16:80809491 | -0.034 | -0.025 | -0.053 | — |
| chr16_80809492_A_G | chr16:80809492 | -0.034 | -0.024 | -0.038 | — |
| chr16_80809510_A_C | chr16:80809510 | -0.034 | -0.023 | 0.000 | — |
| chr16_80809523_A_C | chr16:80809523 | -0.034 | 0.008 | -0.041 | — |
| chr16_80809544_G_C | chr16:80809544 | -0.034 | 0.052 | -0.012 | — |
| chr16_80828465_T_C | chr16:80828465 | -0.034 | -0.053 | -0.026 | — |
| chr16_80828481_C_T | chr16:80828481 | -0.034 | -0.046 | -0.037 | 0.0013% |
| chr16_80828502_T_A | chr16:80828502 | 0.034 | 0.028 | 0.034 | — |
| chr16_80828503_C_T | chr16:80828503 | -0.017 | -0.033 | -0.060 | 0.0013% |
| chr16_80747288_C_A | chr16:80747288 | 0.008 | 0.008 | -0.059 | — |
| chr16_80747293_C_A | chr16:80747293 | 0.005 | 0.005 | -0.059 | — |
| chr16_80747297_G_T | chr16:80747297 | -0.010 | 0.003 | -0.059 | — |
| chr16_80747304_A_C | chr16:80747304 | 0.007 | 0.000 | 0.059 | — |
| chr16_80809473_G_C | chr16:80809473 | 0.012 | 0.015 | 0.059 | — |
| chr16_80809483_G_A | chr16:80809483 | -0.007 | 0.009 | -0.059 | — |
| chr16_80809512_A_T | chr16:80809512 | -0.033 | 0.006 | -0.018 | — |
| chr16_80809557_A_G | chr16:80809557 | -0.004 | -0.006 | -0.059 | — |
| chr16_80828473_A_C | chr16:80828473 | 0.033 | 0.048 | 0.037 | — |
| chr16_80828488_A_G | chr16:80828488 | -0.033 | -0.051 | 0.004 | — |
| chr16_80828507_T_C | chr16:80828507 | 0.026 | 0.056 | 0.059 | <0.001% |
| chr16_80809522_T_G | chr16:80809522 | -0.032 | -0.004 | 0.047 | — |
| chr16_80809548_C_G | chr16:80809548 | 0.032 | 0.025 | 0.038 | — |
| chr16_80747293_C_T | chr16:80747293 | 0.006 | 0.003 | -0.056 | — |
| chr16_80747303_C_A | chr16:80747303 | -0.018 | -0.008 | -0.056 | — |
| chr16_80747319_A_C | chr16:80747319 | 0.004 | -0.003 | 0.056 | — |
| chr16_80747323_C_T | chr16:80747323 | -0.006 | 0.003 | -0.056 | — |
| chr16_80747332_G_A | chr16:80747332 | -0.015 | 0.003 | -0.056 | — |
| chr16_80747361_T_G | chr16:80747361 | 0.007 | 0.000 | 0.056 | — |
| chr16_80809452_A_G | chr16:80809452 | 0.014 | -0.036 | -0.056 | — |
| chr16_80809484_C_T | chr16:80809484 | -0.010 | -0.005 | -0.056 | — |
| chr16_80809488_G_C | chr16:80809488 | 0.000 | -0.010 | 0.056 | <0.001% |
| chr16_80809503_C_T | chr16:80809503 | 0.032 | 0.039 | 0.050 | — |
| chr16_80809507_C_T | chr16:80809507 | 0.003 | 0.014 | -0.056 | <0.001% |
| chr16_80809511_G_T | chr16:80809511 | -0.027 | 0.014 | -0.056 | — |
| chr16_80809528_A_C | chr16:80809528 | -0.032 | 0.016 | -0.024 | — |
| chr16_80828501_T_A | chr16:80828501 | -0.032 | -0.041 | -0.029 | — |
| chr16_80828517_G_A | chr16:80828517 | -0.028 | -0.041 | -0.056 | — |
| chr16_80809452_A_T | chr16:80809452 | 0.031 | -0.006 | -0.026 | <0.001% |
| chr16_80828498_A_C | chr16:80828498 | 0.021 | 0.033 | 0.054 | — |
| chr16_80828498_A_T | chr16:80828498 | 0.031 | 0.023 | 0.025 | — |
| chr16_80828517_G_T | chr16:80828517 | -0.031 | -0.048 | -0.051 | — |
| chr16_80747277_G_T | chr16:80747277 | 0.018 | -0.008 | 0.053 | — |
| chr16_80747311_C_A | chr16:80747311 | -0.009 | 0.005 | -0.053 | — |
| chr16_80747316_G_C | chr16:80747316 | 0.014 | 0.000 | 0.053 | — |
| chr16_80747321_G_A | chr16:80747321 | -0.002 | 0.005 | -0.053 | — |
| chr16_80747321_G_T | chr16:80747321 | -0.002 | 0.005 | -0.053 | — |
| chr16_80809469_C_T | chr16:80809469 | -0.017 | -0.006 | -0.053 | 0.034% |
| chr16_80809476_G_C | chr16:80809476 | 0.025 | 0.025 | 0.053 | — |
| chr16_80809481_G_C | chr16:80809481 | 0.007 | -0.004 | 0.053 | — |
| chr16_80809489_G_T | chr16:80809489 | -0.006 | 0.013 | -0.053 | — |
| chr16_80809490_A_C | chr16:80809490 | -0.030 | -0.019 | -0.003 | — |
| chr16_80809490_A_T | chr16:80809490 | 0.016 | 0.091 | 0.015 | — |
| chr16_80809506_G_T | chr16:80809506 | -0.016 | -0.020 | -0.053 | — |
| chr16_80809513_T_A | chr16:80809513 | -0.030 | 0.005 | -0.015 | — |
| chr16_80809517_G_A | chr16:80809517 | -0.011 | -0.019 | -0.053 | — |
| chr16_80809528_A_G | chr16:80809528 | -0.030 | 0.019 | -0.018 | <0.001% |
| chr16_80809533_T_G | chr16:80809533 | 0.005 | -0.030 | -0.053 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.