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CALML3-AS1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near CALML3-AS1
chr10:5,414,243..5,626,246, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr10_5446539_C_G | chr10:5446539 | -1.000 | 0.000 | -1.000 | <0.001% |
| chr10_5446539_C_T | chr10:5446539 | -1.000 | 0.203 | -1.000 | <0.001% |
| chr10_5446568_C_T | chr10:5446568 | -1.000 | 0.023 | -1.000 | <0.001% |
| chr10_5446537_C_G | chr10:5446537 | -1.000 | 0.292 | -0.512 | 0.0013% |
| chr10_5434197_C_G | chr10:5434197 | -0.859 | -0.464 | -0.635 | <0.001% |
| chr10_5446664_C_G | chr10:5446664 | -0.765 | -0.201 | -0.382 | <0.001% |
| chr10_5446586_G_A | chr10:5446586 | 0.672 | 0.632 | 0.353 | <0.001% |
| chr10_5446584_T_C | chr10:5446584 | 0.671 | -0.102 | 0.547 | 0.0026% |
| chr10_5466554_C_T | chr10:5466554 | 0.569 | 0.275 | 1.000 | 0.0013% |
| chr10_5466804_G_A | chr10:5466804 | -0.509 | -0.440 | -1.000 | <0.001% |
| chr10_5446565_C_T | chr10:5446565 | -0.642 | 0.510 | -0.306 | <0.001% |
| chr10_5446581_G_C | chr10:5446581 | 0.539 | -0.165 | 0.312 | <0.001% |
| chr10_5446488_C_G | chr10:5446488 | 0.516 | 0.221 | 0.253 | 0.0020% |
| chr10_5446633_A_C | chr10:5446633 | -0.516 | -0.358 | -0.471 | <0.001% |
| chr10_5466891_G_C | chr10:5466891 | 0.461 | 0.523 | 0.888 | <0.001% |
| chr10_5446649_G_A | chr10:5446649 | 0.488 | 0.221 | 0.065 | <0.001% |
| chr10_5466900_G_A | chr10:5466900 | 0.404 | 0.320 | 0.847 | <0.001% |
| chr10_5446580_G_A | chr10:5446580 | 0.469 | 0.038 | 0.341 | 0.0039% |
| chr10_5466204_G_A | chr10:5466204 | 0.196 | 0.350 | 0.829 | 0.0013% |
| chr10_5466805_G_A | chr10:5466805 | 0.449 | 0.341 | 0.782 | 0.0013% |
| chr10_5466891_G_A | chr10:5466891 | 0.441 | 0.344 | 0.794 | 0.0046% |
| chr10_5446596_G_C | chr10:5446596 | -0.429 | -0.013 | -0.418 | <0.001% |
| chr10_5446523_G_T | chr10:5446523 | -0.428 | -0.109 | -0.506 | <0.001% |
| chr10_5446544_A_C | chr10:5446544 | -0.419 | -0.355 | -0.582 | <0.001% |
| chr10_5466201_G_C | chr10:5466201 | 0.126 | 0.268 | 0.712 | 0.015% |
| chr10_5446567_G_A | chr10:5446567 | -0.398 | 0.132 | -0.247 | <0.001% |
| chr10_5446628_C_T | chr10:5446628 | -0.398 | -0.030 | -0.235 | <0.001% |
| chr10_5466851_G_C | chr10:5466851 | -0.392 | -0.194 | -0.206 | <0.001% |
| chr10_5446704_G_A | chr10:5446704 | -0.389 | -0.076 | -0.253 | 0.0013% |
| chr10_5466201_G_A | chr10:5466201 | 0.119 | 0.259 | 0.682 | 0.209% |
| chr10_5466898_G_C | chr10:5466898 | 0.201 | 0.216 | 0.682 | <0.001% |
| chr10_5446522_C_T | chr10:5446522 | -0.376 | -0.127 | -0.382 | <0.001% |
| chr10_5446601_C_T | chr10:5446601 | -0.374 | -0.061 | -0.147 | 0.0020% |
| chr10_5466203_G_A | chr10:5466203 | 0.074 | 0.228 | 0.659 | 0.0020% |
| chr10_5466599_C_G | chr10:5466599 | 0.205 | 0.180 | 0.653 | 0.0013% |
| chr10_5466898_G_A | chr10:5466898 | 0.241 | 0.239 | 0.641 | 0.0026% |
| chr10_5446647_G_T | chr10:5446647 | 0.359 | 0.124 | -0.053 | <0.001% |
| chr10_5446567_G_T | chr10:5446567 | -0.346 | 0.145 | -0.288 | 0.0013% |
| chr10_5466350_C_G | chr10:5466350 | -0.168 | -0.173 | -0.612 | <0.001% |
| chr10_5446585_C_G | chr10:5446585 | -0.338 | -0.264 | -0.171 | 0.0020% |
| chr10_5466782_T_C | chr10:5466782 | 0.273 | 0.260 | 0.588 | <0.001% |
| chr10_5446696_T_C | chr10:5446696 | 0.331 | -0.015 | 0.000 | <0.001% |
| chr10_5466892_G_C | chr10:5466892 | 0.186 | 0.218 | 0.571 | 0.0013% |
| chr10_5446585_C_A | chr10:5446585 | 0.318 | 0.030 | 0.200 | <0.001% |
| chr10_5466858_G_A | chr10:5466858 | -0.316 | -0.126 | -0.329 | <0.001% |
| chr10_5466797_T_C | chr10:5466797 | -0.307 | -0.253 | -0.512 | <0.001% |
| chr10_5466551_G_T | chr10:5466551 | 0.191 | 0.090 | 0.541 | 0.014% |
| chr10_5446466_T_A | chr10:5446466 | -0.303 | 0.053 | -0.441 | 0.230% |
| chr10_5467782_T_C | chr10:5467782 | -0.039 | -0.069 | -0.535 | — |
| chr10_5467817_T_C | chr10:5467817 | -0.040 | -0.076 | -0.529 | — |
| chr10_5446606_C_T | chr10:5446606 | 0.293 | 0.086 | 0.306 | <0.001% |
| chr10_5446564_C_T | chr10:5446564 | 0.291 | 0.272 | 0.271 | 0.0020% |
| chr10_5466751_C_A | chr10:5466751 | 0.291 | 0.360 | 0.488 | 0.0020% |
| chr10_5467790_A_C | chr10:5467790 | -0.030 | -0.100 | -0.506 | — |
| chr10_5467794_T_C | chr10:5467794 | -0.047 | -0.095 | -0.476 | — |
| chr10_5466708_C_T | chr10:5466708 | 0.265 | 0.241 | 0.400 | <0.001% |
| chr10_5467776_T_C | chr10:5467776 | -0.028 | -0.067 | -0.465 | — |
| chr10_5466334_G_A | chr10:5466334 | -0.102 | -0.151 | -0.459 | 0.0033% |
| chr10_5446514_T_G | chr10:5446514 | 0.253 | 0.236 | 0.453 | <0.001% |
| chr10_5446608_C_G | chr10:5446608 | -0.253 | -0.183 | -0.200 | <0.001% |
| chr10_5466763_C_T | chr10:5466763 | -0.251 | -0.208 | -0.312 | <0.001% |
| chr10_5466194_G_A | chr10:5466194 | 0.007 | 0.057 | 0.429 | 0.014% |
| chr10_5466336_C_T | chr10:5466336 | 0.205 | 0.211 | 0.429 | 0.0020% |
| chr10_5466735_C_T | chr10:5466735 | -0.186 | -0.138 | -0.429 | <0.001% |
| chr10_5466829_C_A | chr10:5466829 | 0.240 | 0.192 | 0.347 | 0.0013% |
| chr10_5446600_G_A | chr10:5446600 | -0.240 | -0.043 | -0.271 | <0.001% |
| chr10_5466658_C_T | chr10:5466658 | -0.164 | -0.069 | -0.424 | 0.0026% |
| chr10_5446640_T_G | chr10:5446640 | 0.238 | 0.010 | 0.094 | <0.001% |
| chr10_5466850_G_A | chr10:5466850 | -0.237 | -0.095 | -0.118 | 0.030% |
| chr10_5446468_C_A | chr10:5446468 | -0.230 | -0.107 | -0.112 | <0.001% |
| chr10_5446651_C_T | chr10:5446651 | 0.230 | 0.231 | 0.071 | <0.001% |
| chr10_5446817_C_T | chr10:5446817 | -0.230 | -0.048 | -0.153 | 0.0013% |
| chr10_5466892_G_T | chr10:5466892 | 0.141 | 0.176 | 0.406 | 0.0020% |
| chr10_5446646_C_T | chr10:5446646 | 0.228 | 0.025 | -0.029 | 0.0066% |
| chr10_5446612_A_G | chr10:5446612 | -0.226 | -0.066 | -0.082 | <0.001% |
| chr10_5466551_G_A | chr10:5466551 | 0.200 | 0.069 | 0.400 | <0.001% |
| chr10_5446613_G_A | chr10:5446613 | 0.221 | 0.274 | 0.124 | 0.900% |
| chr10_5466815_G_A | chr10:5466815 | 0.220 | 0.009 | 0.341 | 0.0013% |
| chr10_5466341_G_A | chr10:5466341 | -0.089 | -0.117 | -0.388 | <0.001% |
| chr10_5466850_G_T | chr10:5466850 | -0.220 | -0.081 | -0.088 | 0.0020% |
| chr10_5466341_G_T | chr10:5466341 | -0.092 | -0.115 | -0.371 | <0.001% |
| chr10_5446502_C_T | chr10:5446502 | 0.206 | 0.018 | 0.065 | 0.0020% |
| chr10_5466213_G_C | chr10:5466213 | 0.100 | 0.157 | 0.365 | <0.001% |
| chr10_5466706_G_A | chr10:5466706 | 0.205 | 0.043 | 0.347 | 0.0033% |
| chr10_5466300_G_T | chr10:5466300 | -0.107 | -0.094 | -0.359 | 0.0026% |
| chr10_5466287_G_A | chr10:5466287 | 0.198 | -0.001 | 0.118 | 0.0020% |
| chr10_5446404_G_A | chr10:5446404 | -0.195 | -0.117 | -0.029 | <0.001% |
| chr10_5446743_G_A | chr10:5446743 | 0.195 | 0.119 | 0.024 | <0.001% |
| chr10_5446708_C_T | chr10:5446708 | -0.193 | -0.036 | -0.165 | 0.0013% |
| chr10_5446662_G_A | chr10:5446662 | 0.190 | 0.094 | 0.018 | 0.021% |
| chr10_5466828_C_T | chr10:5466828 | -0.146 | -0.118 | -0.335 | <0.001% |
| chr10_5446552_G_A | chr10:5446552 | 0.186 | 0.104 | 0.182 | <0.001% |
| chr10_5466768_C_T | chr10:5466768 | -0.186 | -0.143 | -0.247 | <0.001% |
| chr10_5466893_G_A | chr10:5466893 | 0.087 | 0.118 | 0.324 | 0.0026% |
| chr10_5446694_T_C | chr10:5446694 | -0.180 | -0.013 | -0.106 | <0.001% |
| chr10_5466563_G_A | chr10:5466563 | 0.180 | 0.266 | 0.247 | 0.0092% |
| chr10_5466602_A_C | chr10:5466602 | -0.072 | -0.053 | -0.318 | 0.0020% |
| chr10_5466641_G_A | chr10:5466641 | -0.180 | -0.132 | -0.259 | 0.0020% |
| chr10_5446507_A_G | chr10:5446507 | 0.176 | 0.071 | 0.141 | 0.139% |
| chr10_5466850_G_C | chr10:5466850 | -0.052 | 0.094 | 0.312 | 0.012% |
| chr10_5467016_G_A | chr10:5467016 | 0.077 | 0.107 | 0.312 | 0.0033% |
| chr10_5446642_G_A | chr10:5446642 | 0.175 | -0.086 | 0.118 | <0.001% |
| chr10_5466807_G_A | chr10:5466807 | -0.120 | -0.066 | -0.306 | 0.020% |
| chr10_5466848_G_A | chr10:5466848 | -0.172 | -0.107 | -0.282 | <0.001% |
| chr10_5446420_T_A | chr10:5446420 | 0.171 | 0.046 | 0.271 | <0.001% |
| chr10_5466327_T_C | chr10:5466327 | 0.124 | 0.152 | 0.300 | 0.0046% |
| chr10_5466817_T_A | chr10:5466817 | 0.137 | 0.027 | 0.300 | 0.0013% |
| chr10_5467007_A_G | chr10:5467007 | -0.126 | -0.121 | -0.300 | 0.0013% |
| chr10_5446654_C_G | chr10:5446654 | -0.166 | -0.025 | -0.100 | <0.001% |
| chr10_5446442_T_C | chr10:5446442 | -0.163 | -0.084 | -0.076 | 0.0020% |
| chr10_5446503_T_A | chr10:5446503 | -0.163 | -0.132 | -0.071 | <0.001% |
| chr10_5466676_G_T | chr10:5466676 | -0.082 | -0.027 | -0.288 | <0.001% |
| chr10_5446666_G_A | chr10:5446666 | -0.161 | 0.023 | -0.041 | <0.001% |
| chr10_5446714_C_T | chr10:5446714 | -0.161 | -0.053 | -0.065 | 0.0013% |
| chr10_5466663_G_C | chr10:5466663 | 0.161 | 0.014 | 0.065 | <0.001% |
| chr10_5446556_G_C | chr10:5446556 | -0.155 | -0.127 | -0.282 | <0.001% |
| chr10_5466321_C_T | chr10:5466321 | -0.046 | -0.112 | -0.282 | <0.001% |
| chr10_5467820_A_C | chr10:5467820 | -0.022 | -0.049 | -0.282 | — |
| chr10_5446663_G_C | chr10:5446663 | -0.158 | 0.028 | -0.129 | 0.0013% |
| chr10_5446390_A_G | chr10:5446390 | 0.156 | 0.074 | 0.206 | <0.001% |
| chr10_5446500_A_C | chr10:5446500 | -0.156 | -0.119 | -0.165 | <0.001% |
| chr10_5446492_G_C | chr10:5446492 | 0.153 | -0.005 | 0.147 | 0.217% |
| chr10_5466640_C_T | chr10:5466640 | 0.153 | 0.029 | 0.176 | 0.0053% |
| chr10_5434191_A_G | chr10:5434191 | -0.151 | -0.086 | -0.038 | 0.0013% |
| chr10_5446571_C_G | chr10:5446571 | -0.150 | 0.180 | 0.141 | <0.001% |
| chr10_5466983_T_A | chr10:5466983 | 0.067 | 0.076 | 0.265 | <0.001% |
| chr10_5467865_C_A | chr10:5467865 | 0.047 | 0.036 | 0.265 | — |
| chr10_5446547_G_T | chr10:5446547 | -0.120 | -0.063 | -0.259 | <0.001% |
| chr10_5446680_A_G | chr10:5446680 | -0.145 | -0.046 | -0.094 | <0.001% |
| chr10_5446697_G_A | chr10:5446697 | -0.143 | -0.061 | -0.176 | <0.001% |
| chr10_5466193_C_T | chr10:5466193 | -0.030 | -0.098 | -0.253 | <0.001% |
| chr10_5466773_G_A | chr10:5466773 | -0.088 | -0.099 | -0.253 | <0.001% |
| chr10_5466642_T_C | chr10:5466642 | -0.141 | -0.096 | -0.218 | <0.001% |
| chr10_5466907_G_T | chr10:5466907 | 0.086 | 0.069 | 0.247 | 0.0013% |
| chr10_5467784_C_G | chr10:5467784 | 0.007 | 0.029 | 0.247 | — |
| chr10_5466691_C_T | chr10:5466691 | -0.138 | -0.067 | -0.218 | 0.0013% |
| chr10_5446621_T_G | chr10:5446621 | 0.065 | 0.117 | 0.241 | <0.001% |
| chr10_5434207_T_C | chr10:5434207 | -0.135 | -0.033 | -0.035 | 0.0013% |
| chr10_5466370_C_A | chr10:5466370 | 0.135 | 0.081 | 0.224 | <0.001% |
| chr10_5466968_C_T | chr10:5466968 | -0.042 | -0.063 | -0.235 | 0.0099% |
| chr10_5466632_T_C | chr10:5466632 | 0.131 | 0.044 | 0.135 | <0.001% |
| chr10_5466896_G_A | chr10:5466896 | -0.021 | 0.018 | 0.229 | 0.0033% |
| chr10_5467779_C_A | chr10:5467779 | 0.002 | 0.051 | 0.229 | — |
| chr10_5466284_G_A | chr10:5466284 | 0.116 | 0.124 | 0.224 | 0.0020% |
| chr10_5466844_C_G | chr10:5466844 | 0.088 | 0.071 | 0.224 | <0.001% |
| chr10_5467779_C_G | chr10:5467779 | -0.007 | 0.036 | 0.224 | — |
| chr10_5446652_T_C | chr10:5446652 | -0.125 | -0.066 | -0.106 | <0.001% |
| chr10_5446861_A_G | chr10:5446861 | -0.125 | 0.051 | 0.082 | 0.098% |
| chr10_5466792_C_A | chr10:5466792 | 0.125 | 0.085 | 0.088 | <0.001% |
| chr10_5446403_C_T | chr10:5446403 | -0.123 | -0.003 | -0.076 | <0.001% |
| chr10_5446471_G_C | chr10:5446471 | 0.123 | -0.010 | 0.053 | <0.001% |
| chr10_5466421_T_G | chr10:5466421 | -0.005 | 0.014 | 0.218 | 0.0013% |
| chr10_5466711_C_T | chr10:5466711 | -0.037 | -0.090 | -0.218 | <0.001% |
| chr10_5467780_C_G | chr10:5467780 | 0.007 | 0.024 | 0.218 | <0.001% |
| chr10_5446545_G_C | chr10:5446545 | 0.121 | 0.008 | 0.000 | <0.001% |
| chr10_5446701_A_G | chr10:5446701 | -0.121 | -0.066 | -0.082 | 0.0026% |
| chr10_5466309_T_A | chr10:5466309 | -0.085 | -0.066 | -0.212 | <0.001% |
| chr10_5466342_G_A | chr10:5466342 | 0.120 | 0.065 | -0.112 | 0.0039% |
| chr10_5466631_A_G | chr10:5466631 | 0.116 | 0.008 | -0.006 | <0.001% |
| chr10_5467778_C_G | chr10:5467778 | 0.004 | 0.025 | 0.206 | — |
| chr10_5467785_C_G | chr10:5467785 | 0.000 | 0.027 | 0.206 | — |
| chr10_5446686_C_T | chr10:5446686 | 0.115 | 0.063 | 0.135 | 0.0013% |
| chr10_5466751_C_T | chr10:5466751 | -0.115 | -0.016 | -0.129 | <0.001% |
| chr10_5446504_C_T | chr10:5446504 | 0.113 | -0.058 | -0.076 | <0.001% |
| chr10_5466291_G_A | chr10:5466291 | 0.101 | 0.161 | 0.200 | <0.001% |
| chr10_5466446_C_A | chr10:5466446 | -0.103 | -0.080 | -0.200 | <0.001% |
| chr10_5466606_T_C | chr10:5466606 | -0.111 | -0.014 | -0.159 | <0.001% |
| chr10_5434243_A_G | chr10:5434243 | 0.058 | 0.056 | 0.194 | 0.0013% |
| chr10_5446706_C_T | chr10:5446706 | -0.110 | 0.028 | -0.018 | <0.001% |
| chr10_5466176_C_A | chr10:5466176 | -0.060 | -0.057 | -0.194 | 0.0013% |
| chr10_5466494_G_C | chr10:5466494 | -0.067 | -0.058 | -0.194 | 0.041% |
| chr10_5466755_G_A | chr10:5466755 | -0.110 | -0.100 | -0.176 | 0.0026% |
| chr10_5466840_T_G | chr10:5466840 | 0.095 | 0.067 | 0.194 | 0.0013% |
| chr10_5466905_C_T | chr10:5466905 | -0.032 | -0.057 | -0.194 | 0.0053% |
| chr10_5467780_C_A | chr10:5467780 | 0.006 | 0.041 | 0.194 | — |
| chr10_5467783_C_G | chr10:5467783 | 0.014 | 0.029 | 0.194 | — |
| chr10_5467784_C_A | chr10:5467784 | 0.007 | 0.043 | 0.194 | — |
| chr10_5434248_T_G | chr10:5434248 | 0.108 | 0.038 | 0.091 | 0.0013% |
| chr10_5446702_G_C | chr10:5446702 | -0.108 | -0.013 | -0.082 | <0.001% |
| chr10_5467881_C_G | chr10:5467881 | 0.061 | 0.029 | 0.188 | — |
| chr10_5434258_T_G | chr10:5434258 | 0.067 | 0.079 | 0.182 | 0.106% |
| chr10_5446614_C_T | chr10:5446614 | -0.067 | 0.005 | -0.182 | <0.001% |
| chr10_5466298_C_T | chr10:5466298 | -0.063 | -0.041 | -0.182 | <0.001% |
| chr10_5466576_G_C | chr10:5466576 | -0.103 | -0.004 | -0.147 | <0.001% |
| chr10_5466863_G_A | chr10:5466863 | -0.078 | -0.084 | -0.182 | <0.001% |
| chr10_5466906_G_A | chr10:5466906 | 0.018 | 0.047 | 0.182 | 0.0046% |
| chr10_5466969_G_A | chr10:5466969 | -0.059 | -0.041 | -0.182 | 0.0039% |
| chr10_5467773_G_C | chr10:5467773 | -0.002 | -0.027 | -0.182 | — |
| chr10_5467781_C_G | chr10:5467781 | 0.002 | 0.019 | 0.182 | 0.025% |
| chr10_5467804_T_C | chr10:5467804 | -0.017 | -0.037 | -0.182 | — |
| chr10_5466320_G_T | chr10:5466320 | 0.014 | -0.013 | -0.176 | 0.0046% |
| chr10_5446617_C_G | chr10:5446617 | -0.097 | -0.020 | -0.047 | 24.7% |
| chr10_5466208_C_T | chr10:5466208 | -0.084 | -0.105 | -0.171 | 0.0026% |
| chr10_5466703_A_G | chr10:5466703 | -0.097 | -0.037 | -0.118 | <0.001% |
| chr10_5466822_G_A | chr10:5466822 | -0.033 | -0.041 | -0.171 | 0.0020% |
| chr10_5467083_A_G | chr10:5467083 | 0.043 | 0.060 | 0.171 | <0.001% |
| chr10_5467788_A_C | chr10:5467788 | -0.011 | -0.039 | -0.171 | — |
| chr10_5434114_G_A | chr10:5434114 | -0.094 | -0.046 | -0.118 | <0.001% |
| chr10_5466855_A_T | chr10:5466855 | -0.094 | 0.037 | -0.012 | <0.001% |
| chr10_5446474_G_A | chr10:5446474 | -0.093 | 0.043 | -0.071 | <0.001% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.