CALML5

Scored variants near CALML5

chr10:5,398,696..5,599,570, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr10_5446539_C_G	chr10:5446539	-1.000	0.000	-1.000	<0.001%
chr10_5446539_C_T	chr10:5446539	-1.000	0.203	-1.000	<0.001%
chr10_5446568_C_T	chr10:5446568	-1.000	0.023	-1.000	<0.001%
chr10_5446537_C_G	chr10:5446537	-1.000	0.292	-0.512	0.0013%
chr10_5434197_C_G	chr10:5434197	-0.859	-0.464	-0.635	<0.001%
chr10_5446664_C_G	chr10:5446664	-0.765	-0.201	-0.382	<0.001%
chr10_5446586_G_A	chr10:5446586	0.672	0.632	0.353	<0.001%
chr10_5446584_T_C	chr10:5446584	0.671	-0.102	0.547	0.0026%
chr10_5466554_C_T	chr10:5466554	0.569	0.275	1.000	0.0013%
chr10_5466804_G_A	chr10:5466804	-0.509	-0.440	-1.000	<0.001%
chr10_5446565_C_T	chr10:5446565	-0.642	0.510	-0.306	<0.001%
chr10_5446581_G_C	chr10:5446581	0.539	-0.165	0.312	<0.001%
chr10_5412627_G_A	chr10:5412627	-0.527	-0.256	-0.318	<0.001%
chr10_5446488_C_G	chr10:5446488	0.516	0.221	0.253	0.0020%
chr10_5446633_A_C	chr10:5446633	-0.516	-0.358	-0.471	<0.001%
chr10_5466891_G_C	chr10:5466891	0.461	0.523	0.888	<0.001%
chr10_5446649_G_A	chr10:5446649	0.488	0.221	0.065	<0.001%
chr10_5466900_G_A	chr10:5466900	0.404	0.320	0.847	<0.001%
chr10_5446580_G_A	chr10:5446580	0.469	0.038	0.341	0.0039%
chr10_5466204_G_A	chr10:5466204	0.196	0.350	0.829	0.0013%
chr10_5466805_G_A	chr10:5466805	0.449	0.341	0.782	0.0013%
chr10_5466891_G_A	chr10:5466891	0.441	0.344	0.794	0.0046%
chr10_5412797_C_T	chr10:5412797	0.129	0.222	0.784	<0.001%
chr10_5412591_C_A	chr10:5412591	0.437	0.162	0.341	<0.001%
chr10_5412638_C_G	chr10:5412638	-0.432	-0.223	-0.379	<0.001%
chr10_5446596_G_C	chr10:5446596	-0.429	-0.013	-0.418	<0.001%
chr10_5446523_G_T	chr10:5446523	-0.428	-0.109	-0.506	<0.001%
chr10_5446544_A_C	chr10:5446544	-0.419	-0.355	-0.582	<0.001%
chr10_5466201_G_C	chr10:5466201	0.126	0.268	0.712	0.015%
chr10_5446567_G_A	chr10:5446567	-0.398	0.132	-0.247	<0.001%
chr10_5446628_C_T	chr10:5446628	-0.398	-0.030	-0.235	<0.001%
chr10_5412503_T_C	chr10:5412503	0.070	0.060	0.694	<0.001%
chr10_5466851_G_C	chr10:5466851	-0.392	-0.194	-0.206	<0.001%
chr10_5446704_G_A	chr10:5446704	-0.389	-0.076	-0.253	0.0013%
chr10_5412822_T_G	chr10:5412822	-0.148	-0.191	-0.687	0.0018%
chr10_5466201_G_A	chr10:5466201	0.119	0.259	0.682	0.209%
chr10_5466898_G_C	chr10:5466898	0.201	0.216	0.682	<0.001%
chr10_5446522_C_T	chr10:5446522	-0.376	-0.127	-0.382	<0.001%
chr10_5412819_A_G	chr10:5412819	-0.178	-0.136	-0.663	<0.001%
chr10_5446601_C_T	chr10:5446601	-0.374	-0.061	-0.147	0.0020%
chr10_5412948_G_A	chr10:5412948	0.125	0.098	0.660	<0.001%
chr10_5466203_G_A	chr10:5466203	0.074	0.228	0.659	0.0020%
chr10_5466599_C_G	chr10:5466599	0.205	0.180	0.653	0.0013%
chr10_5466898_G_A	chr10:5466898	0.241	0.239	0.641	0.0026%
chr10_5446647_G_T	chr10:5446647	0.359	0.124	-0.053	<0.001%
chr10_5446567_G_T	chr10:5446567	-0.346	0.145	-0.288	0.0013%
chr10_5466350_C_G	chr10:5466350	-0.168	-0.173	-0.612	<0.001%
chr10_5446585_C_G	chr10:5446585	-0.338	-0.264	-0.171	0.0020%
chr10_5466782_T_C	chr10:5466782	0.273	0.260	0.588	<0.001%
chr10_5446696_T_C	chr10:5446696	0.331	-0.015	0.000	<0.001%
chr10_5466892_G_C	chr10:5466892	0.186	0.218	0.571	0.0013%
chr10_5446585_C_A	chr10:5446585	0.318	0.030	0.200	<0.001%
chr10_5466858_G_A	chr10:5466858	-0.316	-0.126	-0.329	<0.001%
chr10_5466797_T_C	chr10:5466797	-0.307	-0.253	-0.512	<0.001%
chr10_5466551_G_T	chr10:5466551	0.191	0.090	0.541	0.014%
chr10_5412612_T_G	chr10:5412612	-0.304	-0.165	-0.297	<0.001%
chr10_5446466_T_A	chr10:5446466	-0.303	0.053	-0.441	0.230%
chr10_5467782_T_C	chr10:5467782	-0.039	-0.069	-0.535	—
chr10_5412616_A_G	chr10:5412616	-0.293	-0.128	-0.234	<0.001%
chr10_5446606_C_T	chr10:5446606	0.293	0.086	0.306	<0.001%
chr10_5446564_C_T	chr10:5446564	0.291	0.272	0.271	0.0020%
chr10_5466751_C_A	chr10:5466751	0.291	0.360	0.488	0.0020%
chr10_5412675_C_T	chr10:5412675	-0.118	0.083	0.509	0.0013%
chr10_5412920_G_C	chr10:5412920	0.035	0.077	0.494	0.0020%
chr10_5412824_A_G	chr10:5412824	-0.139	-0.121	-0.472	<0.001%
chr10_5466708_C_T	chr10:5466708	0.265	0.241	0.400	<0.001%
chr10_5467776_T_C	chr10:5467776	-0.028	-0.067	-0.465	—
chr10_5412677_C_G	chr10:5412677	-0.082	0.109	0.463	0.0013%
chr10_5412638_C_T	chr10:5412638	-0.262	-0.108	-0.034	0.018%
chr10_5466334_G_A	chr10:5466334	-0.102	-0.151	-0.459	0.0033%
chr10_5446514_T_G	chr10:5446514	0.253	0.236	0.453	<0.001%
chr10_5446608_C_G	chr10:5446608	-0.253	-0.183	-0.200	<0.001%
chr10_5412949_G_T	chr10:5412949	0.105	0.057	0.446	0.0021%
chr10_5466763_C_T	chr10:5466763	-0.251	-0.208	-0.312	<0.001%
chr10_5466194_G_A	chr10:5466194	0.007	0.057	0.429	0.014%
chr10_5466336_C_T	chr10:5466336	0.205	0.211	0.429	0.0020%
chr10_5466735_C_T	chr10:5466735	-0.186	-0.138	-0.429	<0.001%
chr10_5412605_T_C	chr10:5412605	0.241	0.006	0.162	<0.001%
chr10_5466829_C_A	chr10:5466829	0.240	0.192	0.347	0.0013%
chr10_5412912_G_A	chr10:5412912	0.049	0.060	0.424	0.026%
chr10_5446600_G_A	chr10:5446600	-0.240	-0.043	-0.271	<0.001%
chr10_5466658_C_T	chr10:5466658	-0.164	-0.069	-0.424	0.0026%
chr10_5446640_T_G	chr10:5446640	0.238	0.010	0.094	<0.001%
chr10_5466850_G_A	chr10:5466850	-0.237	-0.095	-0.118	0.030%
chr10_5446468_C_A	chr10:5446468	-0.230	-0.107	-0.112	<0.001%
chr10_5446651_C_T	chr10:5446651	0.230	0.231	0.071	<0.001%
chr10_5446817_C_T	chr10:5446817	-0.230	-0.048	-0.153	0.0013%
chr10_5466892_G_T	chr10:5466892	0.141	0.176	0.406	0.0020%
chr10_5446646_C_T	chr10:5446646	0.228	0.025	-0.029	0.0066%
chr10_5446612_A_G	chr10:5446612	-0.226	-0.066	-0.082	<0.001%
chr10_5466551_G_A	chr10:5466551	0.200	0.069	0.400	<0.001%
chr10_5412661_C_G	chr10:5412661	0.187	0.115	0.397	<0.001%
chr10_5412912_G_T	chr10:5412912	0.028	0.057	0.396	<0.001%
chr10_5413039_G_A	chr10:5413039	0.058	0.048	0.394	0.0015%
chr10_5446613_G_A	chr10:5446613	0.221	0.274	0.124	0.900%
chr10_5466815_G_A	chr10:5466815	0.220	0.009	0.341	0.0013%
chr10_5466341_G_A	chr10:5466341	-0.089	-0.117	-0.388	<0.001%
chr10_5466850_G_T	chr10:5466850	-0.220	-0.081	-0.088	0.0020%
chr10_5466341_G_T	chr10:5466341	-0.092	-0.115	-0.371	<0.001%
chr10_5412918_G_C	chr10:5412918	0.028	0.048	0.365	<0.001%
chr10_5446502_C_T	chr10:5446502	0.206	0.018	0.065	0.0020%
chr10_5466213_G_C	chr10:5466213	0.100	0.157	0.365	<0.001%
chr10_5413043_G_A	chr10:5413043	0.058	0.030	0.362	0.0015%
chr10_5466706_G_A	chr10:5466706	0.205	0.043	0.347	0.0033%
chr10_5466300_G_T	chr10:5466300	-0.107	-0.094	-0.359	0.0026%
chr10_5466287_G_A	chr10:5466287	0.198	-0.001	0.118	0.0020%
chr10_5412626_G_C	chr10:5412626	-0.195	-0.110	-0.118	<0.001%
chr10_5446404_G_A	chr10:5446404	-0.195	-0.117	-0.029	<0.001%
chr10_5446743_G_A	chr10:5446743	0.195	0.119	0.024	<0.001%
chr10_5446708_C_T	chr10:5446708	-0.193	-0.036	-0.165	0.0013%
chr10_5446662_G_A	chr10:5446662	0.190	0.094	0.018	0.021%
chr10_5466828_C_T	chr10:5466828	-0.146	-0.118	-0.335	<0.001%
chr10_5446552_G_A	chr10:5446552	0.186	0.104	0.182	<0.001%
chr10_5466768_C_T	chr10:5466768	-0.186	-0.143	-0.247	<0.001%
chr10_5466893_G_A	chr10:5466893	0.087	0.118	0.324	0.0026%
chr10_5412643_C_T	chr10:5412643	0.183	0.111	0.300	<0.001%
chr10_5412950_G_A	chr10:5412950	0.065	0.044	0.318	0.0021%
chr10_5446694_T_C	chr10:5446694	-0.180	-0.013	-0.106	<0.001%
chr10_5466563_G_A	chr10:5466563	0.180	0.266	0.247	0.0092%
chr10_5466602_A_C	chr10:5466602	-0.072	-0.053	-0.318	0.0020%
chr10_5466641_G_A	chr10:5466641	-0.180	-0.132	-0.259	0.0020%
chr10_5412572_G_C	chr10:5412572	0.120	0.053	0.312	0.056%
chr10_5446507_A_G	chr10:5446507	0.176	0.071	0.141	0.139%
chr10_5466850_G_C	chr10:5466850	-0.052	0.094	0.312	0.012%
chr10_5467016_G_A	chr10:5467016	0.077	0.107	0.312	0.0033%
chr10_5446642_G_A	chr10:5446642	0.175	-0.086	0.118	<0.001%
chr10_5413042_G_C	chr10:5413042	0.038	0.033	0.307	<0.001%
chr10_5412916_G_T	chr10:5412916	0.033	0.038	0.306	<0.001%
chr10_5466807_G_A	chr10:5466807	-0.120	-0.066	-0.306	0.020%
chr10_5466848_G_A	chr10:5466848	-0.172	-0.107	-0.282	<0.001%
chr10_5446420_T_A	chr10:5446420	0.171	0.046	0.271	<0.001%
chr10_5412927_T_G	chr10:5412927	-0.070	-0.054	-0.301	0.0016%
chr10_5412613_G_A	chr10:5412613	-0.170	-0.096	-0.103	0.0020%
chr10_5466327_T_C	chr10:5466327	0.124	0.152	0.300	0.0046%
chr10_5466817_T_A	chr10:5466817	0.137	0.027	0.300	0.0013%
chr10_5467007_A_G	chr10:5467007	-0.126	-0.121	-0.300	0.0013%
chr10_5412231_A_G	chr10:5412231	0.030	0.036	0.294	<0.001%
chr10_5412421_G_C	chr10:5412421	0.123	0.025	0.294	<0.001%
chr10_5446654_C_G	chr10:5446654	-0.166	-0.025	-0.100	<0.001%
chr10_5412602_G_A	chr10:5412602	0.138	0.141	0.291	0.0013%
chr10_5412475_C_G	chr10:5412475	-0.053	-0.048	-0.288	<0.001%
chr10_5412532_T_A	chr10:5412532	-0.087	-0.019	0.288	<0.001%
chr10_5446442_T_C	chr10:5446442	-0.163	-0.084	-0.076	0.0020%
chr10_5446503_T_A	chr10:5446503	-0.163	-0.132	-0.071	<0.001%
chr10_5466676_G_T	chr10:5466676	-0.082	-0.027	-0.288	<0.001%
chr10_5446666_G_A	chr10:5446666	-0.161	0.023	-0.041	<0.001%
chr10_5446714_C_T	chr10:5446714	-0.161	-0.053	-0.065	0.0013%
chr10_5466663_G_C	chr10:5466663	0.161	0.014	0.065	<0.001%
chr10_5446556_G_C	chr10:5446556	-0.155	-0.127	-0.282	<0.001%
chr10_5466321_C_T	chr10:5466321	-0.046	-0.112	-0.282	<0.001%
chr10_5413018_G_A	chr10:5413018	0.025	0.048	0.279	40.6%
chr10_5446663_G_C	chr10:5446663	-0.158	0.028	-0.129	0.0013%
chr10_5412921_G_A	chr10:5412921	0.016	0.036	0.276	1.26%
chr10_5413038_G_C	chr10:5413038	0.036	0.030	0.276	<0.001%
chr10_5446390_A_G	chr10:5446390	0.156	0.074	0.206	<0.001%
chr10_5446500_A_C	chr10:5446500	-0.156	-0.119	-0.165	<0.001%
chr10_5412820_G_A	chr10:5412820	-0.016	0.094	0.271	0.0013%
chr10_5446492_G_C	chr10:5446492	0.153	-0.005	0.147	0.217%
chr10_5466640_C_T	chr10:5466640	0.153	0.029	0.176	0.0053%
chr10_5413126_C_T	chr10:5413126	0.153	0.025	0.144	0.097%
chr10_5434191_A_G	chr10:5434191	-0.151	-0.086	-0.038	0.0013%
chr10_5413039_G_T	chr10:5413039	0.032	0.021	0.265	<0.001%
chr10_5446571_C_G	chr10:5446571	-0.150	0.180	0.141	<0.001%
chr10_5466983_T_A	chr10:5466983	0.067	0.076	0.265	<0.001%
chr10_5446547_G_T	chr10:5446547	-0.120	-0.063	-0.259	<0.001%
chr10_5412661_C_T	chr10:5412661	-0.025	0.051	0.257	0.0013%
chr10_5446680_A_G	chr10:5446680	-0.145	-0.046	-0.094	<0.001%
chr10_5412518_G_A	chr10:5412518	0.143	0.014	0.241	0.0013%
chr10_5446697_G_A	chr10:5446697	-0.143	-0.061	-0.176	<0.001%
chr10_5466193_C_T	chr10:5466193	-0.030	-0.098	-0.253	<0.001%
chr10_5466773_G_A	chr10:5466773	-0.088	-0.099	-0.253	<0.001%
chr10_5466642_T_C	chr10:5466642	-0.141	-0.096	-0.218	<0.001%
chr10_5466907_G_T	chr10:5466907	0.086	0.069	0.247	0.0013%
chr10_5467784_C_G	chr10:5467784	0.007	0.029	0.247	—
chr10_5412862_A_G	chr10:5412862	-0.029	-0.046	-0.244	0.0027%
chr10_5466691_C_T	chr10:5466691	-0.138	-0.067	-0.218	0.0013%
chr10_5413051_G_C	chr10:5413051	0.033	0.040	0.243	<0.001%
chr10_5412559_A_G	chr10:5412559	0.110	0.007	0.241	0.0013%
chr10_5446621_T_G	chr10:5446621	0.065	0.117	0.241	<0.001%
chr10_5434207_T_C	chr10:5434207	-0.135	-0.033	-0.035	0.0013%
chr10_5466370_C_A	chr10:5466370	0.135	0.081	0.224	<0.001%
chr10_5412960_G_T	chr10:5412960	0.049	0.039	0.237	<0.001%
chr10_5412575_G_A	chr10:5412575	0.063	0.127	0.235	<0.001%
chr10_5466968_C_T	chr10:5466968	-0.042	-0.063	-0.235	0.0099%
chr10_5413044_G_A	chr10:5413044	0.036	0.025	0.232	<0.001%
chr10_5466632_T_C	chr10:5466632	0.131	0.044	0.135	<0.001%
chr10_5466896_G_A	chr10:5466896	-0.021	0.018	0.229	0.0033%
chr10_5467779_C_A	chr10:5467779	0.002	0.051	0.229	—
chr10_5412476_G_A	chr10:5412476	-0.126	-0.009	-0.118	0.0013%
chr10_5412525_G_A	chr10:5412525	-0.032	-0.023	0.224	<0.001%
chr10_5466284_G_A	chr10:5466284	0.116	0.124	0.224	0.0020%
chr10_5466844_C_G	chr10:5466844	0.088	0.071	0.224	<0.001%
chr10_5467779_C_G	chr10:5467779	-0.007	0.036	0.224	—
chr10_5412834_A_T	chr10:5412834	-0.091	-0.066	-0.222	0.014%
chr10_5412701_C_T	chr10:5412701	0.076	0.050	0.221	0.0020%
chr10_5446652_T_C	chr10:5446652	-0.125	-0.066	-0.106	<0.001%
chr10_5446861_A_G	chr10:5446861	-0.125	0.051	0.082	0.098%
chr10_5466792_C_A	chr10:5466792	0.125	0.085	0.088	<0.001%
chr10_5412206_A_T	chr10:5412206	0.052	0.041	0.218	<0.001%
chr10_5412252_A_G	chr10:5412252	0.052	0.041	0.218	<0.001%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.