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CCDC127

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near CCDC127

chr5:96,867..318,153, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr5_171365_G_A	chr5:171365	0.562	0.464	0.947	0.0013%
chr5_188823_T_C	chr5:188823	0.275	0.038	0.871	<0.001%
chr5_188710_G_C	chr5:188710	-0.468	-0.061	-0.647	0.0020%
chr5_171373_G_A	chr5:171373	0.412	0.445	0.800	<0.001%
chr5_171157_A_C	chr5:171157	-0.102	-0.161	-0.735	0.0013%
chr5_188768_A_G	chr5:188768	-0.384	-0.146	-0.447	<0.001%
chr5_188643_G_A	chr5:188643	0.354	0.069	0.212	<0.001%
chr5_188690_G_A	chr5:188690	-0.319	-0.095	-0.612	0.0053%
chr5_188693_G_C	chr5:188693	-0.334	-0.024	-0.494	<0.001%
chr5_171173_T_C	chr5:171173	-0.086	-0.149	-0.538	0.0033%
chr5_188710_G_A	chr5:188710	-0.271	-0.084	-0.506	0.0020%
chr5_188821_G_C	chr5:188821	0.055	-0.009	0.447	<0.001%
chr5_188824_G_A	chr5:188824	0.090	0.038	0.435	0.0013%
chr5_188738_C_G	chr5:188738	0.243	0.029	0.235	<0.001%
chr5_188645_G_A	chr5:188645	0.188	0.044	0.000	0.0013%
chr5_188670_G_A	chr5:188670	-0.186	-0.044	-0.329	<0.001%
chr5_188821_G_A	chr5:188821	0.068	0.046	0.329	0.0013%
chr5_188852_T_G	chr5:188852	0.027	0.023	0.329	0.0020%
chr5_188714_C_G	chr5:188714	-0.160	-0.088	-0.318	0.0013%
chr5_188812_A_G	chr5:188812	0.083	-0.010	0.318	0.0013%
chr5_188820_C_T	chr5:188820	-0.171	-0.016	-0.318	0.0026%
chr5_171379_G_A	chr5:171379	0.179	0.194	0.235	0.0039%
chr5_171398_G_A	chr5:171398	-0.141	-0.152	-0.300	0.0020%
chr5_188642_A_G	chr5:188642	-0.168	-0.023	-0.235	<0.001%
chr5_188820_C_A	chr5:188820	-0.111	-0.005	-0.294	0.0013%
chr5_108962_G_C	chr5:108962	0.139	0.086	0.291	—
chr5_188598_C_T	chr5:188598	-0.162	-0.052	-0.235	0.0033%
chr5_171167_C_T	chr5:171167	0.076	0.105	0.282	0.0066%
chr5_188700_C_T	chr5:188700	-0.128	-0.048	-0.282	<0.001%
chr5_171094_G_C	chr5:171094	0.110	0.096	0.276	0.0013%
chr5_171386_G_C	chr5:171386	-0.123	-0.096	-0.276	<0.001%
chr5_171116_G_T	chr5:171116	-0.156	-0.164	-0.182	<0.001%
chr5_188633_G_A	chr5:188633	-0.155	-0.028	-0.212	0.0033%
chr5_188913_G_C	chr5:188913	0.067	0.029	0.271	0.012%
chr5_188921_C_A	chr5:188921	-0.097	0.014	-0.271	0.0020%
chr5_171156_C_T	chr5:171156	0.083	0.103	0.265	<0.001%
chr5_188796_C_G	chr5:188796	-0.146	-0.011	-0.118	<0.001%
chr5_188947_C_T	chr5:188947	-0.048	0.025	-0.259	<0.001%
chr5_188640_T_C	chr5:188640	0.143	0.016	0.012	0.0033%
chr5_188760_G_T	chr5:188760	0.143	0.027	0.141	0.019%
chr5_188838_C_A	chr5:188838	0.097	0.006	0.247	<0.001%
chr5_197996_C_T	chr5:197996	0.031	0.061	0.243	0.0020%
chr5_188744_G_A	chr5:188744	-0.136	-0.036	-0.106	<0.001%
chr5_188698_C_T	chr5:188698	-0.058	-0.038	-0.235	0.0053%
chr5_188704_G_A	chr5:188704	-0.126	-0.015	-0.235	<0.001%
chr5_188835_G_A	chr5:188835	-0.043	0.023	-0.235	0.0013%
chr5_188871_C_G	chr5:188871	0.133	0.003	0.176	<0.001%
chr5_171412_C_T	chr5:171412	-0.132	-0.146	-0.224	<0.001%
chr5_188948_G_A	chr5:188948	-0.131	0.039	-0.200	0.0033%
chr5_171150_G_T	chr5:171150	0.101	0.094	0.229	<0.001%
chr5_188735_T_G	chr5:188735	-0.130	-0.013	0.024	0.240%
chr5_188777_C_T	chr5:188777	-0.126	-0.038	-0.129	0.0072%
chr5_188944_C_G	chr5:188944	-0.078	0.019	-0.224	<0.001%
chr5_108897_G_T	chr5:108897	0.073	0.022	0.218	—
chr5_188948_G_C	chr5:188948	-0.123	0.020	-0.200	<0.001%
chr5_188608_C_G	chr5:188608	-0.037	-0.006	0.212	0.030%
chr5_171149_C_A	chr5:171149	-0.117	-0.124	-0.029	<0.001%
chr5_188734_C_T	chr5:188734	0.110	0.080	0.059	0.0020%
chr5_171378_C_T	chr5:171378	-0.088	-0.079	-0.188	0.051%
chr5_188622_C_T	chr5:188622	-0.075	-0.023	-0.188	<0.001%
chr5_188833_C_G	chr5:188833	0.067	-0.047	0.188	<0.001%
chr5_171140_C_T	chr5:171140	-0.103	-0.063	-0.082	<0.001%
chr5_188827_C_A	chr5:188827	0.101	0.022	0.165	<0.001%
chr5_171145_G_A	chr5:171145	-0.042	-0.066	-0.176	0.045%
chr5_188698_C_A	chr5:188698	-0.018	-0.014	-0.176	<0.001%
chr5_188848_C_T	chr5:188848	-0.082	0.032	-0.176	0.0020%
chr5_188905_A_G	chr5:188905	0.035	-0.022	0.176	<0.001%
chr5_171149_C_T	chr5:171149	-0.096	-0.096	0.029	<0.001%
chr5_188614_C_T	chr5:188614	0.042	-0.003	0.165	0.0013%
chr5_188721_C_T	chr5:188721	-0.087	-0.022	-0.165	<0.001%
chr5_188814_G_C	chr5:188814	-0.065	0.006	-0.165	<0.001%
chr5_188921_C_T	chr5:188921	-0.057	0.033	-0.165	0.0046%
chr5_188992_G_A	chr5:188992	-0.017	0.062	-0.165	0.0020%
chr5_188811_C_T	chr5:188811	-0.092	0.013	-0.129	<0.001%
chr5_171152_C_G	chr5:171152	-0.050	-0.049	0.159	<0.001%
chr5_188781_G_C	chr5:188781	-0.090	-0.023	-0.106	77.3%
chr5_188977_C_G	chr5:188977	0.013	0.029	-0.159	<0.001%
chr5_108944_A_C	chr5:108944	-0.009	0.024	0.156	—
chr5_171150_G_A	chr5:171150	-0.057	-0.086	-0.153	0.0013%
chr5_171169_G_A	chr5:171169	-0.085	-0.103	-0.153	<0.001%
chr5_171358_G_A	chr5:171358	0.067	0.063	0.153	0.0013%
chr5_188714_C_T	chr5:188714	-0.087	-0.066	-0.118	0.0013%
chr5_188870_C_T	chr5:188870	-0.033	0.030	-0.153	0.0026%
chr5_188891_G_A	chr5:188891	0.043	0.032	-0.153	0.0020%
chr5_188779_C_T	chr5:188779	0.085	0.015	0.012	0.0013%
chr5_171202_C_T	chr5:171202	-0.084	-0.091	-0.018	0.0046%
chr5_171138_C_G	chr5:171138	-0.020	-0.010	0.147	0.0013%
chr5_188983_T_G	chr5:188983	0.023	-0.075	0.147	<0.001%
chr5_188793_G_A	chr5:188793	-0.082	0.008	-0.141	0.0013%
chr5_188944_C_T	chr5:188944	-0.082	0.032	-0.135	0.0020%
chr5_108911_G_T	chr5:108911	0.048	0.049	0.143	—
chr5_108922_C_A	chr5:108922	-0.059	-0.044	-0.141	—
chr5_108947_G_C	chr5:108947	0.015	0.044	-0.141	—
chr5_188792_C_T	chr5:188792	-0.035	0.009	-0.141	<0.001%
chr5_189002_G_A	chr5:189002	0.000	0.043	-0.141	<0.001%
chr5_188609_C_T	chr5:188609	-0.078	-0.037	0.059	0.0066%
chr5_108904_G_T	chr5:108904	0.038	0.016	0.135	—
chr5_171411_C_T	chr5:171411	-0.057	-0.065	-0.135	<0.001%
chr5_198131_C_T	chr5:198131	0.061	0.042	0.135	<0.001%
chr5_108922_C_T	chr5:108922	-0.042	-0.039	-0.132	0.0013%
chr5_198136_G_A	chr5:198136	-0.074	-0.023	-0.132	0.0085%
chr5_108922_C_G	chr5:108922	-0.057	-0.051	-0.131	—
chr5_198116_C_G	chr5:198116	-0.059	-0.018	-0.131	<0.001%
chr5_108912_G_T	chr5:108912	-0.037	-0.022	-0.129	—
chr5_188702_G_A	chr5:188702	-0.062	0.006	-0.129	0.0026%
chr5_108920_G_C	chr5:108920	-0.044	-0.022	-0.126	—
chr5_171292_G_A	chr5:171292	0.072	0.074	0.088	<0.001%
chr5_108921_C_A	chr5:108921	-0.048	-0.027	-0.125	—
chr5_161964_T_G	chr5:161964	-0.013	-0.006	-0.124	<0.001%
chr5_188939_C_T	chr5:188939	0.070	-0.008	0.047	0.0013%
chr5_108906_T_A	chr5:108906	0.032	0.025	0.122	—
chr5_108912_G_C	chr5:108912	-0.047	-0.039	-0.122	—
chr5_108924_G_C	chr5:108924	-0.040	-0.029	-0.121	—
chr5_171397_C_T	chr5:171397	0.068	0.037	0.024	0.0013%
chr5_108921_C_T	chr5:108921	-0.044	-0.027	-0.119	—
chr5_171121_G_A	chr5:171121	-0.067	-0.093	-0.047	0.0046%
chr5_108968_G_C	chr5:108968	0.008	0.023	0.118	—
chr5_108997_T_G	chr5:108997	-0.027	-0.022	-0.118	—
chr5_109002_G_C	chr5:109002	0.001	-0.010	0.118	—
chr5_109010_C_T	chr5:109010	0.024	0.055	0.118	—
chr5_171194_C_G	chr5:171194	0.048	0.036	0.118	<0.001%
chr5_188589_C_T	chr5:188589	-0.028	-0.032	-0.118	0.0026%
chr5_188849_G_A	chr5:188849	0.032	-0.032	0.118	0.0053%
chr5_188890_C_T	chr5:188890	-0.033	0.011	-0.118	0.0026%
chr5_188941_G_A	chr5:188941	-0.042	0.003	-0.118	0.0020%
chr5_198132_G_A	chr5:198132	-0.061	-0.019	-0.117	0.290%
chr5_108912_G_A	chr5:108912	-0.041	-0.023	-0.116	—
chr5_108895_A_C	chr5:108895	0.043	0.005	0.115	—
chr5_171120_C_T	chr5:171120	-0.065	-0.100	-0.029	0.0026%
chr5_188622_C_G	chr5:188622	-0.065	-0.008	-0.012	<0.001%
chr5_108905_G_C	chr5:108905	0.018	-0.003	0.112	—
chr5_108920_G_A	chr5:108920	-0.033	-0.010	-0.112	<0.001%
chr5_171399_T_C	chr5:171399	-0.037	-0.044	-0.112	<0.001%
chr5_188610_G_A	chr5:188610	-0.063	-0.022	0.024	2.73%
chr5_109010_C_G	chr5:109010	0.001	0.052	0.109	—
chr5_188974_C_T	chr5:188974	0.062	-0.071	-0.024	0.0013%
chr5_171083_A_G	chr5:171083	-0.012	-0.003	0.106	<0.001%
chr5_171402_C_T	chr5:171402	0.037	0.032	0.106	0.0020%
chr5_188789_T_G	chr5:188789	0.035	-0.006	0.106	<0.001%
chr5_188833_C_T	chr5:188833	-0.018	0.014	-0.106	<0.001%
chr5_108905_G_A	chr5:108905	0.028	0.008	0.103	—
chr5_109008_C_T	chr5:109008	-0.040	-0.024	-0.103	0.0020%
chr5_156877_G_A	chr5:156877	0.028	0.030	0.103	0.0013%
chr5_108923_A_G	chr5:108923	-0.037	-0.039	-0.100	—
chr5_171129_C_T	chr5:171129	0.013	0.011	0.100	0.0026%
chr5_171246_C_T	chr5:171246	0.048	0.053	0.100	0.0020%
chr5_171357_C_A	chr5:171357	-0.007	-0.003	-0.100	<0.001%
chr5_171370_G_A	chr5:171370	0.013	0.019	0.100	0.0020%
chr5_188784_G_A	chr5:188784	0.057	0.016	-0.012	<0.001%
chr5_188977_C_A	chr5:188977	0.018	0.008	-0.100	0.0039%
chr5_108904_G_A	chr5:108904	0.027	0.015	0.099	—
chr5_171298_C_T	chr5:171298	0.056	0.070	0.041	<0.001%
chr5_108904_G_C	chr5:108904	0.020	-0.003	0.097	—
chr5_108920_G_T	chr5:108920	-0.027	0.000	-0.097	<0.001%
chr5_108921_C_G	chr5:108921	-0.050	-0.028	-0.097	—
chr5_171093_G_A	chr5:171093	0.055	0.075	0.012	0.0026%
chr5_171372_C_T	chr5:171372	-0.055	-0.048	-0.088	0.0039%
chr5_188683_G_A	chr5:188683	-0.055	0.005	-0.082	0.0026%
chr5_108957_G_T	chr5:108957	-0.009	-0.005	-0.094	—
chr5_162091_C_T	chr5:162091	0.036	0.016	0.094	0.0013%
chr5_173835_C_G	chr5:173835	0.027	-0.022	0.094	<0.001%
chr5_173911_A_T	chr5:173911	-0.021	-0.016	-0.094	0.0013%
chr5_188838_C_T	chr5:188838	0.053	0.033	0.071	0.0026%
chr5_188845_C_T	chr5:188845	-0.013	0.036	-0.094	0.014%
chr5_173802_C_T	chr5:173802	0.023	0.007	0.093	<0.001%
chr5_173804_C_G	chr5:173804	0.026	-0.003	0.091	<0.001%
chr5_108923_A_T	chr5:108923	-0.031	-0.022	-0.088	—
chr5_109002_G_T	chr5:109002	0.003	-0.003	0.088	—
chr5_162077_C_T	chr5:162077	0.006	0.011	0.088	0.024%
chr5_162095_C_T	chr5:162095	0.028	0.013	0.088	0.019%
chr5_171135_C_T	chr5:171135	-0.039	-0.088	-0.088	<0.001%
chr5_173683_C_T	chr5:173683	0.027	0.014	0.088	0.0013%
chr5_188733_G_A	chr5:188733	0.050	0.038	0.047	0.0013%
chr5_198118_G_C	chr5:198118	0.007	0.014	0.087	0.0013%
chr5_198137_C_T	chr5:198137	-0.027	-0.006	-0.087	0.0059%
chr5_108924_G_T	chr5:108924	-0.028	-0.016	-0.085	—
chr5_108947_G_T	chr5:108947	0.019	0.029	-0.085	<0.001%
chr5_108992_G_T	chr5:108992	-0.022	-0.034	-0.085	—
chr5_171154_C_G	chr5:171154	-0.048	-0.049	0.000	0.0020%
chr5_108913_G_A	chr5:108913	-0.048	-0.015	-0.069	—
chr5_108932_C_G	chr5:108932	0.019	0.013	0.082	—
chr5_108948_G_T	chr5:108948	-0.010	-0.016	-0.082	—
chr5_108967_G_C	chr5:108967	0.004	-0.004	0.082	—
chr5_108972_C_G	chr5:108972	-0.023	-0.018	-0.082	—
chr5_162174_C_T	chr5:162174	0.005	-0.010	-0.082	0.0020%
chr5_171342_G_C	chr5:171342	-0.028	-0.033	-0.082	<0.001%
chr5_171357_C_T	chr5:171357	-0.032	-0.004	-0.082	0.011%
chr5_173562_T_C	chr5:173562	-0.014	-0.014	-0.082	0.0013%
chr5_173725_G_A	chr5:173725	-0.004	0.001	-0.082	<0.001%
chr5_188701_C_T	chr5:188701	-0.012	-0.008	-0.082	0.0020%
chr5_188757_T_C	chr5:188757	-0.023	0.018	0.082	<0.001%
chr5_188803_A_G	chr5:188803	0.010	-0.003	0.082	14.6%
chr5_188940_C_T	chr5:188940	-0.017	0.001	-0.082	0.0039%
chr5_189018_G_A	chr5:189018	-0.020	0.005	-0.082	0.598%
chr5_108899_G_C	chr5:108899	0.030	0.015	0.081	—
chr5_173953_C_T	chr5:173953	-0.017	-0.003	-0.081	<0.001%
chr5_108939_T_C	chr5:108939	0.006	0.008	0.079	—
chr5_108965_C_A	chr5:108965	-0.029	-0.020	-0.079	—
chr5_108969_T_C	chr5:108969	-0.017	-0.020	0.079	—
chr5_108987_C_A	chr5:108987	-0.023	-0.028	-0.079	—

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.