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CCDC40
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near CCDC40
chr17:79,936,631..80,200,613, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_80008576_C_T | chr17:80008576 | -1.000 | -1.000 | -1.000 | — |
| chr17_80008576_C_G | chr17:80008576 | -1.000 | -0.980 | -1.000 | — |
| chr17_80008581_G_C | chr17:80008581 | -1.000 | -0.868 | -1.000 | — |
| chr17_80008576_C_A | chr17:80008576 | -1.000 | -0.855 | -1.000 | — |
| chr17_80008581_G_T | chr17:80008581 | -1.000 | -0.805 | -1.000 | — |
| chr17_80008585_G_A | chr17:80008585 | -1.000 | -0.591 | -1.000 | — |
| chr17_80008585_G_C | chr17:80008585 | -1.000 | -0.500 | -1.000 | — |
| chr17_80008582_G_C | chr17:80008582 | -1.000 | -0.797 | -1.000 | — |
| chr17_80008580_A_C | chr17:80008580 | -1.000 | -0.734 | -1.000 | — |
| chr17_80008581_G_A | chr17:80008581 | -1.000 | -0.721 | -1.000 | <0.001% |
| chr17_80008584_G_C | chr17:80008584 | -1.000 | -0.569 | -1.000 | — |
| chr17_80008628_G_A | chr17:80008628 | 1.000 | 1.000 | 1.000 | — |
| chr17_80008585_G_T | chr17:80008585 | -1.000 | -0.462 | -0.929 | <0.001% |
| chr17_80008584_G_A | chr17:80008584 | -1.000 | -0.518 | -1.000 | — |
| chr17_80008582_G_T | chr17:80008582 | -1.000 | -0.546 | -1.000 | — |
| chr17_80008584_G_T | chr17:80008584 | -1.000 | -0.388 | -0.871 | — |
| chr17_80008663_T_G | chr17:80008663 | -1.000 | -0.520 | -0.565 | — |
| chr17_80008643_C_G | chr17:80008643 | -1.000 | -0.571 | -0.659 | — |
| chr17_80008637_C_T | chr17:80008637 | -1.000 | -0.584 | -0.671 | — |
| chr17_80008643_C_A | chr17:80008643 | -1.000 | -0.581 | -0.729 | — |
| chr17_80008631_T_G | chr17:80008631 | 1.000 | 0.619 | 0.647 | — |
| chr17_80008682_A_C | chr17:80008682 | -1.000 | -0.480 | -0.729 | — |
| chr17_80008644_T_G | chr17:80008644 | -1.000 | -0.373 | -0.482 | — |
| chr17_80008634_G_A | chr17:80008634 | 1.000 | 0.594 | 0.659 | 0.0013% |
| chr17_80008642_C_T | chr17:80008642 | -1.000 | -0.393 | -0.565 | — |
| chr17_80008642_C_G | chr17:80008642 | -1.000 | -0.411 | -0.553 | — |
| chr17_80008624_A_T | chr17:80008624 | 1.000 | 0.789 | 0.682 | — |
| chr17_80008643_C_T | chr17:80008643 | -1.000 | -0.437 | -0.494 | — |
| chr17_80008642_C_A | chr17:80008642 | -1.000 | -0.358 | -0.518 | — |
| chr17_80008635_G_A | chr17:80008635 | -1.000 | -0.421 | -0.482 | — |
| chr17_80008632_T_C | chr17:80008632 | 1.000 | 0.406 | 0.518 | — |
| chr17_80008644_T_A | chr17:80008644 | -1.000 | -0.353 | -0.506 | — |
| chr17_80008587_G_T | chr17:80008587 | -0.975 | -0.107 | -0.659 | — |
| chr17_80008699_T_C | chr17:80008699 | -0.955 | -0.348 | -0.529 | — |
| chr17_80008680_C_T | chr17:80008680 | 0.862 | 0.221 | 0.494 | — |
| chr17_80008637_C_A | chr17:80008637 | -0.842 | -0.348 | -0.435 | — |
| chr17_80008587_G_C | chr17:80008587 | -0.812 | -0.114 | -0.482 | 0.0026% |
| chr17_80008586_A_G | chr17:80008586 | -0.799 | -0.294 | -0.635 | — |
| chr17_80008681_C_A | chr17:80008681 | 0.719 | 0.579 | 1.000 | — |
| chr17_80008621_A_C | chr17:80008621 | -0.782 | -0.327 | -0.506 | — |
| chr17_80008687_G_C | chr17:80008687 | -0.752 | -0.350 | -0.518 | — |
| chr17_80008667_C_A | chr17:80008667 | -0.742 | -0.259 | -0.212 | — |
| chr17_80008625_C_G | chr17:80008625 | 0.709 | 0.345 | 0.388 | — |
| chr17_80008645_C_G | chr17:80008645 | -0.702 | -0.317 | -0.341 | — |
| chr17_80008578_C_A | chr17:80008578 | -0.696 | -0.261 | -0.447 | — |
| chr17_80008635_G_T | chr17:80008635 | 0.692 | 0.381 | 0.341 | — |
| chr17_80008637_C_G | chr17:80008637 | -0.692 | -0.241 | -0.294 | — |
| chr17_80008647_C_G | chr17:80008647 | 0.679 | 0.241 | 0.412 | — |
| chr17_80008632_T_A | chr17:80008632 | 0.676 | 0.173 | 0.306 | — |
| chr17_80008577_A_C | chr17:80008577 | -0.672 | -0.117 | -0.388 | — |
| chr17_80008583_G_T | chr17:80008583 | 0.669 | 0.142 | 0.071 | — |
| chr17_80008628_G_T | chr17:80008628 | 0.656 | 0.241 | 0.353 | — |
| chr17_80008580_A_T | chr17:80008580 | -0.642 | -0.294 | -0.612 | — |
| chr17_80008608_C_G | chr17:80008608 | -0.642 | -0.175 | -0.376 | <0.001% |
| chr17_80008634_G_C | chr17:80008634 | 0.639 | 0.147 | 0.447 | 0.0013% |
| chr17_80008635_G_C | chr17:80008635 | 0.639 | 0.289 | 0.329 | — |
| chr17_80008634_G_T | chr17:80008634 | 0.632 | 0.160 | 0.282 | 0.0013% |
| chr17_80008640_C_G | chr17:80008640 | -0.629 | -0.193 | -0.188 | — |
| chr17_80008664_T_A | chr17:80008664 | -0.626 | -0.246 | -0.365 | — |
| chr17_80008631_T_A | chr17:80008631 | 0.612 | 0.058 | 0.224 | — |
| chr17_80008659_C_T | chr17:80008659 | -0.599 | -0.269 | -0.341 | — |
| chr17_80008631_T_C | chr17:80008631 | 0.596 | -0.038 | 0.247 | — |
| chr17_80008639_C_A | chr17:80008639 | 0.596 | 0.165 | 0.259 | — |
| chr17_80008640_C_A | chr17:80008640 | -0.582 | -0.175 | -0.153 | — |
| chr17_80008621_A_G | chr17:80008621 | -0.572 | -0.244 | -0.424 | — |
| chr17_80008667_C_T | chr17:80008667 | -0.569 | -0.246 | -0.282 | — |
| chr17_80008609_G_T | chr17:80008609 | 0.562 | 0.239 | 0.424 | — |
| chr17_80008611_G_T | chr17:80008611 | -0.562 | -0.282 | -0.565 | — |
| chr17_80008639_C_G | chr17:80008639 | 0.562 | 0.104 | 0.341 | — |
| chr17_80008687_G_T | chr17:80008687 | -0.562 | -0.312 | -0.471 | — |
| chr17_80008651_C_A | chr17:80008651 | -0.556 | -0.206 | -0.282 | — |
| chr17_80008627_A_C | chr17:80008627 | -0.539 | -0.226 | -0.106 | — |
| chr17_80008651_C_G | chr17:80008651 | -0.539 | -0.190 | -0.212 | — |
| chr17_80008625_C_T | chr17:80008625 | 0.532 | 0.416 | 0.294 | — |
| chr17_80008537_G_T | chr17:80008537 | 0.516 | 0.142 | 0.718 | — |
| chr17_80008622_G_A | chr17:80008622 | 0.512 | 0.173 | 0.341 | — |
| chr17_80008703_G_C | chr17:80008703 | -0.512 | -0.279 | -0.435 | — |
| chr17_80008672_G_C | chr17:80008672 | -0.509 | -0.142 | -0.353 | — |
| chr17_80008703_G_T | chr17:80008703 | -0.509 | -0.282 | -0.518 | — |
| chr17_80008678_C_T | chr17:80008678 | -0.502 | -0.132 | -0.271 | 0.0079% |
| chr17_80008638_C_T | chr17:80008638 | 0.496 | 0.132 | 0.306 | — |
| chr17_80008639_C_T | chr17:80008639 | -0.496 | -0.236 | -0.200 | — |
| chr17_80008662_G_T | chr17:80008662 | -0.493 | -0.173 | -0.212 | — |
| chr17_80008523_G_C | chr17:80008523 | 0.483 | 0.218 | 0.424 | — |
| chr17_80008588_C_G | chr17:80008588 | -0.476 | -0.015 | -0.424 | — |
| chr17_80008616_A_C | chr17:80008616 | -0.476 | -0.089 | -0.165 | — |
| chr17_80008661_G_T | chr17:80008661 | 0.473 | 0.129 | 0.271 | — |
| chr17_80008666_C_G | chr17:80008666 | 0.469 | 0.223 | 0.271 | — |
| chr17_80008578_C_T | chr17:80008578 | -0.463 | -0.211 | -0.494 | <0.001% |
| chr17_80008620_C_G | chr17:80008620 | -0.459 | -0.251 | -0.482 | — |
| chr17_80008625_C_A | chr17:80008625 | 0.459 | 0.234 | 0.282 | <0.001% |
| chr17_80008640_C_T | chr17:80008640 | -0.459 | -0.091 | -0.141 | — |
| chr17_80008647_C_A | chr17:80008647 | 0.459 | 0.155 | 0.235 | — |
| chr17_80008674_C_G | chr17:80008674 | 0.456 | 0.244 | 0.235 | — |
| chr17_80008653_C_T | chr17:80008653 | -0.453 | -0.201 | -0.318 | — |
| chr17_80008610_G_A | chr17:80008610 | -0.449 | -0.173 | -0.435 | — |
| chr17_80008646_C_G | chr17:80008646 | -0.449 | -0.170 | -0.094 | — |
| chr17_80008654_C_G | chr17:80008654 | 0.439 | 0.249 | 0.329 | — |
| chr17_80008618_G_A | chr17:80008618 | -0.436 | -0.195 | -0.424 | — |
| chr17_80008671_C_G | chr17:80008671 | -0.433 | -0.104 | -0.294 | — |
| chr17_80008646_C_A | chr17:80008646 | -0.429 | -0.160 | -0.129 | — |
| chr17_80008619_C_A | chr17:80008619 | -0.423 | -0.218 | -0.529 | — |
| chr17_80008587_G_A | chr17:80008587 | -0.419 | 0.020 | -0.412 | 0.0013% |
| chr17_80008666_C_A | chr17:80008666 | 0.409 | 0.317 | 0.141 | — |
| chr17_80008667_C_G | chr17:80008667 | -0.406 | -0.102 | -0.071 | — |
| chr17_80008679_G_C | chr17:80008679 | -0.403 | -0.218 | -0.400 | — |
| chr17_80008683_C_G | chr17:80008683 | 0.403 | 0.147 | 0.376 | — |
| chr17_80008630_G_C | chr17:80008630 | 0.399 | 0.010 | 0.141 | — |
| chr17_80008661_G_C | chr17:80008661 | 0.399 | 0.129 | 0.141 | — |
| chr17_80008610_G_T | chr17:80008610 | 0.393 | 0.317 | 0.035 | — |
| chr17_80008560_A_C | chr17:80008560 | 0.389 | 0.195 | 0.118 | — |
| chr17_80008623_G_C | chr17:80008623 | 0.386 | -0.013 | 0.141 | — |
| chr17_80008660_G_A | chr17:80008660 | -0.386 | -0.140 | -0.259 | 0.0085% |
| chr17_80008573_C_G | chr17:80008573 | -0.379 | -0.152 | -0.259 | — |
| chr17_80008605_C_A | chr17:80008605 | 0.373 | 0.096 | 0.247 | — |
| chr17_80008616_A_T | chr17:80008616 | -0.373 | -0.079 | -0.129 | — |
| chr17_79945653_T_G | chr17:79945653 | 0.245 | -0.004 | 0.653 | — |
| chr17_80008614_C_T | chr17:80008614 | 0.369 | 0.112 | 0.141 | — |
| chr17_80008629_A_G | chr17:80008629 | -0.369 | -0.145 | -0.059 | — |
| chr17_80008651_C_T | chr17:80008651 | -0.366 | -0.127 | -0.235 | — |
| chr17_80008697_C_A | chr17:80008697 | -0.366 | -0.140 | -0.271 | — |
| chr17_80008664_T_C | chr17:80008664 | -0.363 | -0.112 | -0.188 | — |
| chr17_80008655_T_C | chr17:80008655 | -0.359 | -0.051 | -0.224 | — |
| chr17_80008653_C_A | chr17:80008653 | -0.353 | -0.145 | -0.200 | <0.001% |
| chr17_80008695_A_C | chr17:80008695 | 0.353 | 0.168 | 0.224 | — |
| chr17_80008614_C_G | chr17:80008614 | 0.349 | 0.063 | 0.153 | — |
| chr17_80008592_G_C | chr17:80008592 | -0.346 | -0.081 | -0.106 | — |
| chr17_80008523_G_T | chr17:80008523 | 0.339 | 0.160 | 0.224 | <0.001% |
| chr17_80008559_C_G | chr17:80008559 | 0.339 | 0.069 | -0.047 | — |
| chr17_80008659_C_G | chr17:80008659 | -0.339 | -0.066 | -0.071 | — |
| chr17_80008676_G_C | chr17:80008676 | -0.339 | -0.155 | -0.188 | — |
| chr17_80008698_C_A | chr17:80008698 | -0.339 | -0.162 | -0.459 | — |
| chr17_80008674_C_T | chr17:80008674 | -0.336 | -0.145 | -0.259 | — |
| chr17_80008678_C_A | chr17:80008678 | -0.333 | -0.150 | -0.224 | 0.0020% |
| chr17_80008632_T_G | chr17:80008632 | 0.329 | -0.008 | 0.188 | — |
| chr17_80008580_A_G | chr17:80008580 | -0.326 | -0.183 | -0.412 | — |
| chr17_80008678_C_G | chr17:80008678 | -0.326 | -0.137 | -0.094 | — |
| chr17_80008542_G_C | chr17:80008542 | -0.323 | -0.036 | -0.012 | — |
| chr17_80008665_C_A | chr17:80008665 | -0.323 | -0.033 | -0.153 | — |
| chr17_80008671_C_A | chr17:80008671 | -0.319 | -0.084 | -0.294 | — |
| chr17_80008677_A_C | chr17:80008677 | -0.319 | -0.168 | -0.165 | — |
| chr17_80008579_C_G | chr17:80008579 | 0.316 | -0.005 | -0.071 | — |
| chr17_80008611_G_A | chr17:80008611 | -0.316 | -0.173 | -0.306 | — |
| chr17_80008641_G_C | chr17:80008641 | 0.313 | -0.058 | -0.082 | — |
| chr17_80008622_G_T | chr17:80008622 | 0.309 | 0.129 | 0.071 | — |
| chr17_80008629_A_C | chr17:80008629 | 0.309 | -0.013 | 0.235 | — |
| chr17_80008685_C_T | chr17:80008685 | 0.309 | 0.046 | 0.012 | — |
| chr17_80008657_C_G | chr17:80008657 | 0.306 | 0.132 | 0.188 | — |
| chr17_80008597_A_C | chr17:80008597 | 0.303 | 0.030 | 0.047 | — |
| chr17_80008612_A_C | chr17:80008612 | 0.303 | 0.122 | 0.200 | — |
| chr17_80008540_A_G | chr17:80008540 | -0.300 | -0.036 | -0.047 | — |
| chr17_80008608_C_A | chr17:80008608 | -0.293 | -0.066 | -0.235 | — |
| chr17_80008624_A_G | chr17:80008624 | 0.293 | 0.221 | 0.282 | — |
| chr17_80008644_T_C | chr17:80008644 | -0.196 | -0.142 | -0.518 | — |
| chr17_80008649_C_T | chr17:80008649 | -0.293 | -0.140 | -0.212 | — |
| chr17_80008620_C_A | chr17:80008620 | -0.286 | -0.147 | -0.388 | — |
| chr17_80008650_A_T | chr17:80008650 | -0.280 | -0.053 | -0.153 | — |
| chr17_80008652_A_G | chr17:80008652 | 0.280 | 0.173 | 0.259 | — |
| chr17_80008691_A_G | chr17:80008691 | 0.280 | 0.124 | 0.212 | — |
| chr17_80008532_A_T | chr17:80008532 | 0.276 | 0.292 | 0.329 | — |
| chr17_80008614_C_A | chr17:80008614 | 0.276 | 0.066 | 0.059 | — |
| chr17_80008655_T_G | chr17:80008655 | 0.276 | 0.129 | 0.282 | — |
| chr17_80008669_G_T | chr17:80008669 | -0.276 | -0.140 | -0.176 | — |
| chr17_80008690_C_T | chr17:80008690 | 0.276 | 0.074 | 0.082 | <0.001% |
| chr17_79945717_T_A | chr17:79945717 | 0.208 | 0.107 | 0.482 | — |
| chr17_80008660_G_T | chr17:80008660 | 0.273 | 0.127 | 0.082 | <0.001% |
| chr17_80008612_A_T | chr17:80008612 | -0.270 | -0.102 | -0.235 | — |
| chr17_80008620_C_T | chr17:80008620 | -0.270 | -0.137 | -0.329 | <0.001% |
| chr17_80008633_C_T | chr17:80008633 | 0.270 | -0.015 | 0.059 | — |
| chr17_80008534_A_C | chr17:80008534 | -0.266 | -0.081 | -0.176 | — |
| chr17_80008535_C_G | chr17:80008535 | -0.266 | -0.066 | -0.165 | — |
| chr17_80008621_A_T | chr17:80008621 | -0.266 | -0.168 | -0.294 | — |
| chr17_80008623_G_T | chr17:80008623 | 0.266 | 0.030 | -0.118 | — |
| chr17_80008675_T_C | chr17:80008675 | -0.266 | -0.155 | -0.141 | — |
| chr17_80008613_C_A | chr17:80008613 | 0.263 | 0.094 | 0.118 | — |
| chr17_80008649_C_A | chr17:80008649 | -0.260 | -0.119 | -0.176 | 0.0072% |
| chr17_80008660_G_C | chr17:80008660 | 0.260 | 0.114 | 0.129 | — |
| chr17_80008700_C_G | chr17:80008700 | 0.260 | 0.099 | 0.165 | — |
| chr17_80008627_A_T | chr17:80008627 | -0.253 | -0.096 | -0.012 | — |
| chr17_80008653_C_G | chr17:80008653 | -0.253 | -0.117 | -0.082 | — |
| chr17_80008680_C_G | chr17:80008680 | -0.253 | -0.091 | -0.059 | — |
| chr17_80008606_T_A | chr17:80008606 | 0.250 | 0.104 | 0.188 | — |
| chr17_80008535_C_A | chr17:80008535 | -0.246 | -0.089 | -0.176 | — |
| chr17_80008582_G_A | chr17:80008582 | 0.246 | 0.023 | -0.012 | — |
| chr17_80008693_C_G | chr17:80008693 | -0.246 | -0.084 | -0.118 | — |
| chr17_80008696_G_A | chr17:80008696 | 0.246 | 0.129 | 0.035 | — |
| chr17_80008701_C_A | chr17:80008701 | -0.246 | -0.175 | -0.235 | — |
| chr17_80008686_A_C | chr17:80008686 | -0.243 | -0.119 | -0.176 | — |
| chr17_80008687_G_A | chr17:80008687 | -0.243 | -0.096 | -0.165 | — |
| chr17_80008523_G_A | chr17:80008523 | 0.240 | 0.094 | 0.247 | — |
| chr17_80008586_A_C | chr17:80008586 | -0.240 | -0.094 | 0.012 | — |
| chr17_80008588_C_A | chr17:80008588 | -0.240 | -0.013 | -0.353 | — |
| chr17_80008611_G_C | chr17:80008611 | -0.240 | -0.129 | -0.235 | <0.001% |
| chr17_80008658_T_G | chr17:80008658 | 0.240 | 0.122 | 0.224 | — |
| chr17_80008679_G_A | chr17:80008679 | -0.240 | -0.112 | -0.200 | 0.012% |
| chr17_80008559_C_A | chr17:80008559 | 0.236 | 0.094 | -0.094 | — |
| chr17_80008608_C_T | chr17:80008608 | -0.236 | -0.053 | -0.129 | 0.0039% |
| chr17_80008681_C_T | chr17:80008681 | -0.236 | -0.129 | -0.212 | — |
| chr17_80008629_A_T | chr17:80008629 | 0.233 | 0.008 | 0.094 | — |
| chr17_80008633_C_A | chr17:80008633 | 0.233 | -0.013 | 0.071 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.