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CDH12
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near CDH12
chr5:21,650,675..22,953,344, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr5_21919616_C_T | chr5:21919616 | -37,760 | -7,584 | -13,248 | 6.6e-6 |
| chr5_21814052_G_A | chr5:21814052 | 36,160 | 5,856 | 8,752 | 6.6e-6 |
| chr5_21814087_T_C | chr5:21814087 | 35,552 | 6,528 | 8,224 | 1.3e-5 |
| chr5_21919625_T_C | chr5:21919625 | -28,512 | -3,616 | -10,512 | 6.6e-6 |
| chr5_22212803_C_G | chr5:22212803 | -20,704 | -5,088 | -13,120 | 6.6e-6 |
| chr5_21814088_G_A | chr5:21814088 | -19,424 | -4,192 | -4,752 | 6.6e-6 |
| chr5_21813997_C_G | chr5:21813997 | 18,976 | 4,480 | 5,744 | 6.6e-6 |
| chr5_21814031_A_C | chr5:21814031 | -18,752 | -4,160 | -5,440 | 6.6e-6 |
| chr5_22212798_A_G | chr5:22212798 | -18,368 | -6,784 | -10,688 | 6.6e-6 |
| chr5_21814071_A_G | chr5:21814071 | -16,352 | -3,344 | -4,048 | 6.6e-6 |
| chr5_22214278_T_C | chr5:22214278 | -15,616 | -2,624 | -7,296 | 4.6e-5 |
| chr5_22853057_C_T | chr5:22853057 | 14,208 | 2,432 | 6,656 | 6.6e-6 |
| chr5_21814018_G_A | chr5:21814018 | -14,080 | -3,712 | -4,040 | 2.0e-5 |
| chr5_21814037_C_A | chr5:21814037 | -13,120 | -2,464 | -3,640 | 6.6e-6 |
| chr5_22214279_C_A | chr5:22214279 | -12,992 | -2,640 | -7,040 | 4.6e-5 |
| chr5_22214279_C_G | chr5:22214279 | -12,816 | -2,128 | -6,720 | 4.9e-4 |
| chr5_22214277_C_T | chr5:22214277 | -12,480 | -2,640 | -6,848 | 6.6e-6 |
| chr5_21919628_C_T | chr5:21919628 | -12,416 | -800 | -3,568 | 1.3e-5 |
| chr5_21813993_T_C | chr5:21813993 | -12,352 | -2,560 | -3,200 | 6.6e-6 |
| chr5_21813998_A_G | chr5:21813998 | 12,000 | 3,328 | 4,944 | 6.6e-6 |
| chr5_21919601_A_G | chr5:21919601 | -11,584 | -2,304 | -3,568 | 6.9e-3 |
| chr5_21814037_C_G | chr5:21814037 | -11,392 | -1,744 | -2,384 | 6.6e-6 |
| chr5_22212883_C_A | chr5:22212883 | 11,328 | 3,104 | 3,776 | 6.6e-6 |
| chr5_21813932_C_A | chr5:21813932 | 10,592 | -640 | 3,792 | 1.3e-5 |
| chr5_21814081_A_G | chr5:21814081 | -10,560 | -1,248 | -1,664 | 6.6e-6 |
| chr5_22853392_A_G | chr5:22853392 | -8,928 | -320 | -7,296 | 6.6e-6 |
| chr5_22852867_G_C | chr5:22852867 | 8,864 | 2,128 | 9,536 | 6.6e-6 |
| chr5_21813960_G_C | chr5:21813960 | 8,448 | 2,144 | 2,592 | 1.3e-5 |
| chr5_21814035_A_G | chr5:21814035 | -8,384 | -2,464 | -2,208 | 6.6e-6 |
| chr5_22212738_C_G | chr5:22212738 | -8,256 | -2,464 | -3,744 | 6.6e-6 |
| chr5_22214273_C_G | chr5:22214273 | -8,096 | -1,984 | -5,008 | 6.6e-5 |
| chr5_22214273_C_T | chr5:22214273 | -7,920 | -1,744 | -4,624 | 3.9e-5 |
| chr5_22212746_G_C | chr5:22212746 | -7,904 | -1,984 | -4,704 | 6.6e-6 |
| chr5_21813990_C_T | chr5:21813990 | 7,712 | 480 | 544 | 2.4e-1 |
| chr5_22214304_C_G | chr5:22214304 | 7,584 | 480 | 1,824 | 9.1e-1 |
| chr5_22853338_C_G | chr5:22853338 | -7,552 | -288 | -4,096 | 2.6e-5 |
| chr5_22853426_G_T | chr5:22853426 | -7,232 | -1,664 | -5,824 | 2.6e-5 |
| chr5_22212675_C_T | chr5:22212675 | -6,688 | -1,344 | -4,256 | 6.6e-6 |
| chr5_22853105_A_G | chr5:22853105 | 6,656 | -96 | 3,136 | 1.3e-5 |
| chr5_22212815_G_C | chr5:22212815 | 6,560 | 1,280 | 4,096 | 6.6e-6 |
| chr5_22853156_T_C | chr5:22853156 | 6,528 | 1,152 | 5,376 | 2.0e-5 |
| chr5_22212894_G_C | chr5:22212894 | 6,464 | 1,280 | 3,584 | 6.6e-6 |
| chr5_22853058_C_A | chr5:22853058 | 6,144 | 2,144 | 5,248 | 6.6e-6 |
| chr5_21814115_A_G | chr5:21814115 | 6,080 | 1,024 | 1,984 | 1.3e-5 |
| chr5_22214243_A_G | chr5:22214243 | 5,984 | 1,536 | 4,320 | 3.8e-1 |
| chr5_22212859_T_A | chr5:22212859 | 5,952 | 1,120 | 2,176 | 2.6e-5 |
| chr5_21919627_A_T | chr5:21919627 | -5,920 | -448 | -2,240 | 2.0e-5 |
| chr5_21919596_C_A | chr5:21919596 | -5,888 | -160 | -1,664 | 6.6e-6 |
| chr5_21813929_G_A | chr5:21813929 | -5,760 | -1,376 | -2,752 | 6.6e-6 |
| chr5_22212572_G_A | chr5:22212572 | 5,760 | 96 | 3,136 | 6.6e-6 |
| chr5_21813928_C_T | chr5:21813928 | -5,504 | -1,088 | -2,448 | 7.2e-5 |
| chr5_22212846_G_T | chr5:22212846 | -5,472 | -608 | -3,680 | 6.6e-6 |
| chr5_22852884_C_A | chr5:22852884 | 5,440 | 1,216 | 3,200 | 1.3e-5 |
| chr5_22853427_C_T | chr5:22853427 | -5,376 | -1,568 | -5,472 | 6.6e-6 |
| chr5_22212918_A_G | chr5:22212918 | 5,184 | 1,312 | 2,816 | 6.6e-6 |
| chr5_22212870_C_G | chr5:22212870 | -5,056 | -736 | -1,536 | 6.6e-6 |
| chr5_21919686_A_C | chr5:21919686 | 4,960 | 864 | 2,240 | 1.3e-5 |
| chr5_21919597_G_A | chr5:21919597 | -4,928 | 256 | -1,776 | 7.0e-4 |
| chr5_21919596_C_T | chr5:21919596 | -4,800 | -160 | -1,888 | 7.2e-5 |
| chr5_22853054_T_G | chr5:22853054 | 4,608 | 864 | 3,456 | 6.6e-6 |
| chr5_21813974_T_A | chr5:21813974 | -4,512 | -864 | -1,712 | 6.6e-6 |
| chr5_22212627_G_T | chr5:22212627 | 4,512 | 544 | 3,488 | 6.6e-6 |
| chr5_22853146_C_T | chr5:22853146 | 4,352 | 992 | 2,176 | 6.6e-6 |
| chr5_22094368_G_T | chr5:22094368 | -4,240 | -720 | -4,512 | 3.0e-4 |
| chr5_21919602_G_T | chr5:21919602 | -4,224 | -416 | -1,280 | 6.6e-6 |
| chr5_21919579_A_C | chr5:21919579 | 4,160 | -96 | 1,760 | 1.3e-5 |
| chr5_22212829_C_T | chr5:22212829 | -4,160 | -896 | -3,520 | 6.6e-6 |
| chr5_21813967_G_A | chr5:21813967 | -4,128 | -768 | -1,040 | 1.3e-5 |
| chr5_22214292_G_A | chr5:22214292 | -4,128 | -608 | -1,920 | 6.6e-6 |
| chr5_22214302_G_A | chr5:22214302 | 4,064 | 608 | 1,280 | 6.6e-6 |
| chr5_21729934_T_C | chr5:21729934 | 4,032 | 1,024 | 2,240 | 6.6e-6 |
| chr5_22853385_C_G | chr5:22853385 | -4,032 | -192 | -3,904 | 6.6e-6 |
| chr5_22214263_G_A | chr5:22214263 | 3,904 | 320 | 1,376 | 2.0e-5 |
| chr5_22853399_C_T | chr5:22853399 | -3,872 | -288 | -3,776 | 6.6e-6 |
| chr5_22853425_C_G | chr5:22853425 | -3,840 | -1,600 | -5,280 | 2.6e-5 |
| chr5_22853322_C_T | chr5:22853322 | 3,840 | -640 | 4,800 | 6.6e-6 |
| chr5_22853323_A_G | chr5:22853323 | 3,840 | 96 | 4,480 | 6.6e-6 |
| chr5_22853338_C_A | chr5:22853338 | -3,840 | 0 | -1,984 | 2.6e-5 |
| chr5_22212806_G_A | chr5:22212806 | -3,744 | -1,248 | -3,904 | 3.3e-5 |
| chr5_21814086_A_G | chr5:21814086 | -3,712 | -544 | -848 | 6.6e-6 |
| chr5_22853128_T_G | chr5:22853128 | 3,712 | 448 | 2,752 | 6.6e-6 |
| chr5_22853460_A_G | chr5:22853460 | 3,648 | 1,024 | 4,384 | 6.6e-6 |
| chr5_22853400_C_G | chr5:22853400 | 3,648 | 192 | 4,224 | 6.6e-6 |
| chr5_21814020_G_T | chr5:21814020 | -3,616 | -1,136 | -1,152 | 6.6e-6 |
| chr5_22853344_T_C | chr5:22853344 | 3,584 | 128 | 2,752 | 5.4e-2 |
| chr5_21813982_T_A | chr5:21813982 | -3,552 | -1,216 | -1,136 | 6.6e-6 |
| chr5_21919666_T_A | chr5:21919666 | 3,552 | 160 | -64 | 6.6e-6 |
| chr5_21814045_T_A | chr5:21814045 | -3,456 | 544 | -752 | 7.5e-2 |
| chr5_22853377_G_T | chr5:22853377 | -3,392 | -480 | -3,392 | 1.3e-5 |
| chr5_21813994_C_T | chr5:21813994 | -3,360 | 320 | 176 | 6.6e-6 |
| chr5_21813973_T_C | chr5:21813973 | -3,296 | -736 | -1,168 | 1.1e-4 |
| chr5_22214237_C_G | chr5:22214237 | 3,296 | 160 | 2,432 | 6.6e-6 |
| chr5_22853378_C_G | chr5:22853378 | -3,264 | -384 | -2,752 | 1.9e-4 |
| chr5_21663270_C_T | chr5:21663270 | 3,216 | 1,824 | 5,920 | 2.0e-5 |
| chr5_22853386_G_A | chr5:22853386 | -3,200 | -448 | -3,968 | 6.6e-6 |
| chr5_21919517_T_G | chr5:21919517 | -3,200 | -544 | -384 | 6.6e-6 |
| chr5_21919518_G_A | chr5:21919518 | -3,200 | -192 | -1,152 | 2.5e-4 |
| chr5_21919670_G_A | chr5:21919670 | -3,200 | 64 | -1,792 | 5.9e-5 |
| chr5_21919576_C_T | chr5:21919576 | -3,168 | -32 | -1,952 | 6.6e-6 |
| chr5_21813943_G_A | chr5:21813943 | -3,104 | -256 | -1,424 | 1.3e-5 |
| chr5_22853099_G_A | chr5:22853099 | 3,072 | 1,248 | 1,216 | 6.6e-6 |
| chr5_21919606_T_C | chr5:21919606 | 3,040 | -32 | 384 | 6.6e-6 |
| chr5_21919669_C_T | chr5:21919669 | -3,040 | 160 | -1,408 | 6.6e-6 |
| chr5_22212548_C_T | chr5:22212548 | 3,008 | 288 | 2,240 | 6.6e-6 |
| chr5_22853207_G_A | chr5:22853207 | -3,008 | -672 | -2,560 | 6.6e-6 |
| chr5_22214219_A_G | chr5:22214219 | -2,944 | -160 | -560 | 6.6e-6 |
| chr5_22853403_G_A | chr5:22853403 | -2,944 | -384 | -2,048 | 3.9e-5 |
| chr5_21814116_A_G | chr5:21814116 | -2,912 | -576 | -352 | 6.7e-6 |
| chr5_22853046_C_A | chr5:22853046 | -2,880 | -656 | -2,304 | 6.6e-6 |
| chr5_21663275_G_A | chr5:21663275 | -2,816 | -784 | -5,632 | 6.6e-6 |
| chr5_22853036_C_A | chr5:22853036 | 2,816 | 640 | 1,792 | 4.3e-3 |
| chr5_22853310_T_C | chr5:22853310 | 2,816 | 192 | 1,600 | 6.6e-6 |
| chr5_22212699_G_A | chr5:22212699 | -2,784 | -608 | -1,792 | 5.3e-5 |
| chr5_22212846_G_C | chr5:22212846 | -2,784 | 608 | -2,016 | 6.6e-6 |
| chr5_22853410_C_T | chr5:22853410 | 2,752 | 1,088 | 3,904 | 5.9e-5 |
| chr5_22852890_C_A | chr5:22852890 | -2,752 | -1,280 | -3,776 | 6.6e-6 |
| chr5_22214261_A_G | chr5:22214261 | -2,752 | -800 | -1,136 | 5.5e-4 |
| chr5_22212853_G_C | chr5:22212853 | -2,688 | -512 | -2,816 | 6.6e-6 |
| chr5_21813950_G_A | chr5:21813950 | -2,688 | -576 | -1,280 | 2.6e-5 |
| chr5_21813992_A_G | chr5:21813992 | 2,688 | 1,216 | 2,336 | 2.0e-5 |
| chr5_21919677_C_G | chr5:21919677 | -2,656 | 64 | -624 | 6.6e-6 |
| chr5_22212661_T_A | chr5:22212661 | 2,624 | 1,152 | 1,856 | 7.6e-6 |
| chr5_22212822_C_G | chr5:22212822 | 2,624 | -800 | 2,304 | 1.3e-5 |
| chr5_22214291_G_A | chr5:22214291 | -2,624 | -320 | -1,408 | 6.6e-6 |
| chr5_22853267_A_G | chr5:22853267 | -2,624 | -864 | -2,112 | 6.6e-6 |
| chr5_21919575_T_C | chr5:21919575 | 2,592 | 416 | 896 | 1.3e-5 |
| chr5_22853092_C_T | chr5:22853092 | 2,560 | 864 | 3,072 | 1.3e-5 |
| chr5_21919593_C_G | chr5:21919593 | -2,560 | -224 | 704 | 6.6e-6 |
| chr5_22853402_A_C | chr5:22853402 | -2,560 | -192 | -1,792 | 2.0e-5 |
| chr5_22094420_T_C | chr5:22094420 | 2,528 | 352 | 800 | — |
| chr5_21919644_A_G | chr5:21919644 | -2,496 | 0 | -384 | 6.6e-6 |
| chr5_22214245_G_A | chr5:22214245 | 2,464 | 416 | 368 | 6.6e-6 |
| chr5_22853164_C_G | chr5:22853164 | 2,432 | 960 | 2,688 | 6.6e-6 |
| chr5_21919554_C_T | chr5:21919554 | -2,432 | -576 | -96 | 6.6e-6 |
| chr5_22094368_G_A | chr5:22094368 | -2,432 | -192 | -2,208 | 6.6e-6 |
| chr5_22853116_A_G | chr5:22853116 | 2,432 | 384 | 2,240 | 6.6e-6 |
| chr5_21663269_C_A | chr5:21663269 | -2,416 | -752 | -3,744 | 2.6e-5 |
| chr5_21919631_A_G | chr5:21919631 | 2,400 | 256 | 480 | 6.6e-6 |
| chr5_21919663_G_A | chr5:21919663 | -2,400 | -64 | -704 | 6.6e-6 |
| chr5_22212565_G_C | chr5:22212565 | -2,400 | -640 | -2,144 | 6.6e-6 |
| chr5_22212725_G_A | chr5:22212725 | 2,368 | 1,536 | 3,040 | 3.9e-4 |
| chr5_22212692_T_C | chr5:22212692 | 2,368 | 320 | 2,048 | 2.6e-5 |
| chr5_22853024_G_C | chr5:22853024 | -2,368 | -480 | -1,856 | 6.6e-6 |
| chr5_22853160_T_G | chr5:22853160 | -2,368 | -1,312 | -1,344 | 6.6e-6 |
| chr5_22853394_G_A | chr5:22853394 | 2,368 | 576 | 1,280 | 3.3e-5 |
| chr5_22853445_G_A | chr5:22853445 | -2,336 | -416 | -1,440 | 1.3e-5 |
| chr5_22853459_C_A | chr5:22853459 | 2,336 | 736 | 1,760 | 6.6e-6 |
| chr5_22212746_G_A | chr5:22212746 | -2,304 | -672 | -2,880 | 4.6e-5 |
| chr5_22212846_G_A | chr5:22212846 | -2,304 | 608 | -2,272 | 6.6e-6 |
| chr5_22853353_A_G | chr5:22853353 | -2,240 | 352 | -320 | 6.6e-6 |
| chr5_21814020_G_A | chr5:21814020 | -2,208 | -448 | -824 | 1.3e-5 |
| chr5_21919673_G_A | chr5:21919673 | -2,208 | 0 | -416 | 6.6e-5 |
| chr5_22212676_C_A | chr5:22212676 | -2,208 | -192 | -2,176 | 6.6e-6 |
| chr5_22212526_G_T | chr5:22212526 | -2,176 | 288 | -2,592 | 6.6e-6 |
| chr5_22212816_A_G | chr5:22212816 | 2,176 | -768 | 256 | 4.6e-5 |
| chr5_22852898_C_T | chr5:22852898 | -2,176 | -464 | -1,632 | 1.3e-5 |
| chr5_22094423_A_C | chr5:22094423 | 2,160 | 112 | 640 | — |
| chr5_21919517_T_C | chr5:21919517 | -2,144 | -288 | 256 | 5.6e-4 |
| chr5_21919647_A_G | chr5:21919647 | 2,144 | 0 | 896 | 6.6e-6 |
| chr5_21919678_G_A | chr5:21919678 | -2,112 | 64 | -960 | 1.3e-5 |
| chr5_22212703_T_C | chr5:22212703 | -2,112 | -736 | -1,440 | 5.4e-3 |
| chr5_22853127_C_T | chr5:22853127 | -2,112 | -32 | -1,216 | 2.6e-5 |
| chr5_22214220_C_A | chr5:22214220 | -2,080 | -160 | -720 | 3.9e-5 |
| chr5_21663295_C_A | chr5:21663295 | 2,064 | 560 | 2,240 | 2.0e-5 |
| chr5_22853355_C_A | chr5:22853355 | -2,048 | -224 | -2,112 | 6.6e-6 |
| chr5_22853025_C_T | chr5:22853025 | 2,048 | -96 | 512 | 6.6e-6 |
| chr5_21813960_G_A | chr5:21813960 | -2,016 | -224 | -864 | 6.6e-6 |
| chr5_21919657_A_G | chr5:21919657 | 2,016 | 64 | 960 | 6.6e-6 |
| chr5_21663295_C_G | chr5:21663295 | 2,000 | 608 | 3,136 | 6.6e-6 |
| chr5_22853140_T_G | chr5:22853140 | -1,984 | 896 | 3,264 | 2.3e-4 |
| chr5_21919577_G_T | chr5:21919577 | -1,984 | -352 | -1,760 | 4.6e-5 |
| chr5_21813959_T_C | chr5:21813959 | 1,952 | 736 | 1,776 | 6.6e-6 |
| chr5_21663285_G_A | chr5:21663285 | -1,936 | -480 | -3,008 | 6.6e-6 |
| chr5_21663260_C_A | chr5:21663260 | -1,920 | -544 | -3,296 | 1.3e-5 |
| chr5_22853004_C_G | chr5:22853004 | 1,920 | 288 | 2,688 | 6.6e-6 |
| chr5_22853381_G_A | chr5:22853381 | -1,920 | -192 | -2,176 | 1.3e-5 |
| chr5_22212818_C_T | chr5:22212818 | 1,920 | 512 | 320 | 5.9e-5 |
| chr5_22212862_C_G | chr5:22212862 | 1,920 | 576 | 896 | 3.3e-5 |
| chr5_22212898_A_G | chr5:22212898 | 1,920 | 480 | 1,216 | 2.6e-5 |
| chr5_22212785_C_T | chr5:22212785 | -1,888 | 32 | -736 | 6.6e-6 |
| chr5_22214267_A_T | chr5:22214267 | 1,888 | 64 | 608 | 6.6e-6 |
| chr5_21813997_C_T | chr5:21813997 | 1,856 | -128 | -880 | 2.0e-5 |
| chr5_21663184_C_A | chr5:21663184 | 1,808 | 160 | 800 | 1.3e-5 |
| chr5_21663236_A_C | chr5:21663236 | -1,792 | -864 | -1,408 | 2.0e-5 |
| chr5_22212886_G_A | chr5:22212886 | 1,792 | 352 | 1,088 | 1.3e-5 |
| chr5_22853065_C_A | chr5:22853065 | -1,728 | -416 | -2,496 | 6.6e-6 |
| chr5_22212526_G_A | chr5:22212526 | -1,664 | -64 | -2,048 | 6.6e-6 |
| chr5_22853373_A_G | chr5:22853373 | 1,600 | 224 | 1,984 | 2.6e-5 |
| chr5_22853144_A_C | chr5:22853144 | 1,536 | 704 | 2,112 | 4.6e-5 |
| chr5_21663297_T_C | chr5:21663297 | -1,488 | -608 | -2,240 | 5.9e-5 |
| chr5_22853020_A_G | chr5:22853020 | 1,472 | 64 | 2,624 | 3.9e-5 |
| chr5_22852889_G_A | chr5:22852889 | -1,440 | -464 | -1,984 | 6.6e-6 |
| chr5_22212619_C_T | chr5:22212619 | -1,376 | 32 | -1,984 | 6.6e-6 |
| chr5_22212581_C_G | chr5:22212581 | -1,280 | 96 | -1,856 | 1.4e-4 |
| chr5_22853265_G_A | chr5:22853265 | -1,152 | -384 | -2,688 | 6.6e-6 |
| chr5_22212829_C_A | chr5:22212829 | -1,120 | 1,856 | -1,216 | 6.6e-6 |
| chr5_21663277_T_C | chr5:21663277 | 944 | 320 | 2,112 | 6.6e-6 |
| chr5_22853266_G_C | chr5:22853266 | -832 | -192 | -1,920 | 6.6e-6 |
| chr5_22853181_C_T | chr5:22853181 | -704 | 256 | 1,984 | 6.6e-6 |
| chr5_22212695_A_G | chr5:22212695 | 608 | -224 | 2,144 | 6.6e-6 |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.