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CEP104

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near CEP104

chr1:3,712,085..3,957,211, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr1_3733913_G_A	chr1:3733913	0.354	0.560	1.000	<0.001%
chr1_3733681_G_A	chr1:3733681	-0.455	-0.808	-1.000	0.0033%
chr1_3718181_G_T	chr1:3718181	-0.666	0.156	-0.024	<0.001%
chr1_3733510_G_A	chr1:3733510	0.641	0.627	1.000	<0.001%
chr1_3724589_C_T	chr1:3724589	-0.617	-0.225	-0.900	0.012%
chr1_3724588_C_T	chr1:3724588	-0.575	-0.171	-0.829	<0.001%
chr1_3718185_G_A	chr1:3718185	-0.488	0.157	0.365	<0.001%
chr1_3733683_C_T	chr1:3733683	-0.308	-0.525	-0.829	<0.001%
chr1_3727483_G_C	chr1:3727483	0.363	0.156	0.824	0.0026%
chr1_3733684_T_G	chr1:3733684	-0.273	-0.510	-0.759	<0.001%
chr1_3727473_C_T	chr1:3727473	-0.378	-0.220	-0.588	<0.001%
chr1_3733632_T_C	chr1:3733632	-0.230	-0.387	-0.653	<0.001%
chr1_3727481_G_A	chr1:3727481	-0.366	-0.219	-0.576	<0.001%
chr1_3718205_C_A	chr1:3718205	-0.234	-0.019	-0.624	<0.001%
chr1_3718188_C_T	chr1:3718188	-0.351	0.205	0.382	<0.001%
chr1_3718176_C_A	chr1:3718176	-0.337	0.166	0.153	0.0013%
chr1_3727470_C_T	chr1:3727470	-0.336	-0.198	-0.565	<0.001%
chr1_3718555_G_A	chr1:3718555	0.061	0.093	0.588	<0.001%
chr1_3733609_C_T	chr1:3733609	0.261	0.376	0.588	<0.001%
chr1_3718147_G_A	chr1:3718147	0.331	0.018	0.529	<0.001%
chr1_3718565_G_A	chr1:3718565	0.058	0.084	0.582	0.012%
chr1_3718540_G_T	chr1:3718540	0.068	0.077	0.571	<0.001%
chr1_3733743_C_G	chr1:3733743	-0.201	-0.291	-0.571	<0.001%
chr1_3733697_T_C	chr1:3733697	-0.191	-0.326	-0.512	0.0013%
chr1_3718541_G_A	chr1:3718541	0.042	0.079	0.494	0.0020%
chr1_3718559_A_G	chr1:3718559	-0.054	-0.055	-0.494	<0.001%
chr1_3733545_A_C	chr1:3733545	0.124	0.189	0.482	0.0013%
chr1_3717640_C_A	chr1:3717640	0.091	0.088	0.476	0.0053%
chr1_3718173_G_A	chr1:3718173	-0.259	0.044	-0.018	<0.001%
chr1_3733663_G_A	chr1:3733663	-0.152	-0.235	-0.447	0.0059%
chr1_3733516_T_A	chr1:3733516	0.164	0.236	0.412	<0.001%
chr1_3733700_C_G	chr1:3733700	-0.151	-0.286	-0.406	<0.001%
chr1_3733913_G_C	chr1:3733913	0.127	0.179	0.400	0.0091%
chr1_3733605_G_A	chr1:3733605	-0.113	-0.223	-0.388	<0.001%
chr1_3718129_C_T	chr1:3718129	0.208	0.012	0.229	<0.001%
chr1_3724543_C_T	chr1:3724543	0.207	0.013	0.147	<0.001%
chr1_3724598_G_A	chr1:3724598	-0.138	-0.047	-0.359	<0.001%
chr1_3718246_C_A	chr1:3718246	0.096	0.021	0.347	<0.001%
chr1_3724582_C_G	chr1:3724582	-0.195	-0.033	-0.206	<0.001%
chr1_3740012_T_G	chr1:3740012	0.187	0.142	0.335	—
chr1_3740013_G_A	chr1:3740013	0.165	0.127	0.332	—
chr1_3739987_T_G	chr1:3739987	0.163	0.046	0.329	—
chr1_3717451_G_A	chr1:3717451	0.067	0.025	0.321	0.0033%
chr1_3739981_T_C	chr1:3739981	0.179	0.145	0.288	—
chr1_3739952_A_G	chr1:3739952	0.176	0.381	0.282	—
chr1_3718190_C_G	chr1:3718190	-0.176	0.024	-0.188	<0.001%
chr1_3733595_C_T	chr1:3733595	0.152	0.235	0.306	0.0026%
chr1_3733730_A_G	chr1:3733730	0.159	0.203	0.306	0.0026%
chr1_3734014_C_T	chr1:3734014	-0.084	-0.070	-0.306	<0.001%
chr1_3739981_T_A	chr1:3739981	0.157	0.033	0.306	—
chr1_3739981_T_G	chr1:3739981	0.121	0.018	0.306	—
chr1_3739979_C_G	chr1:3739979	0.172	0.000	0.276	—
chr1_3727556_T_G	chr1:3727556	0.012	-0.065	-0.300	<0.001%
chr1_3733604_C_T	chr1:3733604	-0.082	-0.113	-0.300	0.0039%
chr1_3718189_C_T	chr1:3718189	-0.169	0.032	-0.053	<0.001%
chr1_3740014_A_G	chr1:3740014	0.149	0.086	0.297	—
chr1_3733197_A_G	chr1:3733197	0.067	0.155	0.294	<0.001%
chr1_3718133_C_A	chr1:3718133	0.164	-0.002	0.135	<0.001%
chr1_3739992_T_G	chr1:3739992	0.163	0.135	0.253	—
chr1_3727581_G_A	chr1:3727581	0.032	0.067	0.282	<0.001%
chr1_3733693_C_T	chr1:3733693	0.122	0.152	0.282	<0.001%
chr1_3739977_G_C	chr1:3739977	0.160	0.038	0.244	—
chr1_3739980_C_G	chr1:3739980	0.118	0.008	0.282	—
chr1_3740015_T_A	chr1:3740015	0.160	0.249	0.182	—
chr1_3733680_C_T	chr1:3733680	-0.126	-0.209	-0.276	0.098%
chr1_3739978_A_G	chr1:3739978	0.118	-0.003	0.274	—
chr1_3718326_A_C	chr1:3718326	0.154	0.013	0.082	<0.001%
chr1_3718277_C_G	chr1:3718277	-0.151	-0.005	-0.200	<0.001%
chr1_3734015_A_T	chr1:3734015	-0.061	-0.057	-0.265	0.0033%
chr1_3739980_C_T	chr1:3739980	0.148	0.030	0.265	—
chr1_3717456_C_T	chr1:3717456	0.087	0.040	0.262	0.011%
chr1_3739977_G_T	chr1:3739977	0.148	0.020	0.179	—
chr1_3733515_C_T	chr1:3733515	0.062	0.150	0.259	0.0046%
chr1_3733931_T_G	chr1:3733931	0.012	0.016	0.259	<0.001%
chr1_3739968_C_G	chr1:3739968	0.109	0.081	0.259	—
chr1_3740013_G_T	chr1:3740013	0.129	0.112	0.259	—
chr1_3740015_T_C	chr1:3740015	0.146	0.442	0.103	0.025%
chr1_3717473_A_G	chr1:3717473	0.064	0.027	0.256	<0.001%
chr1_3739951_T_G	chr1:3739951	0.119	0.076	0.256	—
chr1_3740015_T_G	chr1:3740015	0.145	0.086	0.256	—
chr1_3718247_C_G	chr1:3718247	0.141	0.014	0.253	<0.001%
chr1_3739988_A_T	chr1:3739988	0.133	0.061	0.250	—
chr1_3718194_G_A	chr1:3718194	0.046	0.011	0.247	<0.001%
chr1_3718220_G_A	chr1:3718220	0.062	0.024	0.247	<0.001%
chr1_3727384_C_A	chr1:3727384	-0.101	-0.047	-0.247	<0.001%
chr1_3718270_T_G	chr1:3718270	0.052	-0.009	0.241	<0.001%
chr1_3740014_A_T	chr1:3740014	0.113	0.051	0.241	—
chr1_3718216_C_A	chr1:3718216	-0.135	0.010	-0.171	<0.001%
chr1_3739979_C_T	chr1:3739979	0.117	-0.071	0.238	—
chr1_3718247_C_T	chr1:3718247	0.097	0.016	0.235	0.0033%
chr1_3718558_T_C	chr1:3718558	0.017	0.036	0.235	<0.001%
chr1_3733753_C_G	chr1:3733753	0.092	0.088	0.235	0.032%
chr1_3734007_G_A	chr1:3734007	0.040	0.004	0.235	0.0040%
chr1_3734013_C_A	chr1:3734013	-0.063	-0.044	-0.235	<0.001%
chr1_3739951_T_C	chr1:3739951	0.133	0.107	0.215	—
chr1_3740004_C_G	chr1:3740004	0.132	0.135	0.224	—
chr1_3718247_C_A	chr1:3718247	0.097	0.016	0.229	0.0013%
chr1_3727559_G_A	chr1:3727559	0.035	0.081	0.229	<0.001%
chr1_3739977_G_A	chr1:3739977	0.129	0.005	0.156	0.0093%
chr1_3727436_G_A	chr1:3727436	0.126	0.033	0.035	<0.001%
chr1_3727447_G_C	chr1:3727447	-0.112	-0.043	-0.224	0.0020%
chr1_3734022_C_T	chr1:3734022	-0.050	-0.018	-0.224	0.0020%
chr1_3717443_G_A	chr1:3717443	-0.059	-0.038	-0.221	<0.001%
chr1_3724586_C_T	chr1:3724586	-0.012	-0.043	-0.218	0.0020%
chr1_3733509_C_T	chr1:3733509	-0.047	-0.051	-0.218	0.0020%
chr1_3734023_G_A	chr1:3734023	-0.075	-0.010	-0.218	0.0020%
chr1_3718248_G_T	chr1:3718248	-0.122	-0.016	-0.212	0.0053%
chr1_3739950_C_G	chr1:3739950	0.105	0.137	0.215	0.0033%
chr1_3717346_C_T	chr1:3717346	0.045	0.023	0.212	0.0026%
chr1_3724580_C_T	chr1:3724580	-0.031	-0.025	-0.212	1.62%
chr1_3727480_C_T	chr1:3727480	0.096	0.027	0.212	0.0039%
chr1_3733559_A_C	chr1:3733559	0.071	0.095	0.212	<0.001%
chr1_3733662_C_T	chr1:3733662	-0.103	-0.147	-0.212	<0.001%
chr1_3740013_G_C	chr1:3740013	0.084	0.061	0.212	—
chr1_3733753_C_A	chr1:3733753	0.119	0.113	0.200	1.68%
chr1_3740014_A_C	chr1:3740014	0.093	0.030	0.209	—
chr1_3739984_A_C	chr1:3739984	0.117	0.127	0.144	—
chr1_3739956_C_G	chr1:3739956	0.103	0.124	0.204	—
chr1_3739976_C_A	chr1:3739976	0.116	-0.033	0.188	—
chr1_3733670_T_C	chr1:3733670	-0.006	0.053	0.200	<0.001%
chr1_3733744_G_A	chr1:3733744	0.097	0.113	0.200	0.013%
chr1_3733758_G_A	chr1:3733758	-0.043	-0.055	-0.200	<0.001%
chr1_3739950_C_A	chr1:3739950	0.102	0.051	0.200	—
chr1_3739967_C_G	chr1:3739967	0.113	0.076	0.191	—
chr1_3739990_C_A	chr1:3739990	0.112	0.117	0.109	—
chr1_3740001_A_G	chr1:3740001	0.112	0.218	0.165	—
chr1_3718134_A_G	chr1:3718134	0.110	-0.003	0.112	0.0026%
chr1_3733451_C_T	chr1:3733451	-0.071	-0.055	-0.194	0.0013%
chr1_3733563_A_C	chr1:3733563	-0.025	-0.042	-0.194	0.019%
chr1_3734049_G_C	chr1:3734049	0.072	0.069	0.194	0.0013%
chr1_3740003_C_T	chr1:3740003	0.099	0.137	0.194	—
chr1_3739989_A_T	chr1:3739989	0.109	0.091	0.138	—
chr1_3733312_C_A	chr1:3733312	-0.047	-0.039	-0.188	<0.001%
chr1_3733772_G_A	chr1:3733772	-0.052	-0.055	-0.188	<0.001%
chr1_3734054_G_A	chr1:3734054	-0.027	-0.033	-0.188	<0.001%
chr1_3739983_T_G	chr1:3739983	0.062	-0.005	0.185	—
chr1_3733578_G_T	chr1:3733578	-0.071	-0.075	-0.182	<0.001%
chr1_3733606_C_T	chr1:3733606	-0.058	-0.077	-0.182	0.0033%
chr1_3733695_C_T	chr1:3733695	0.087	0.146	0.182	<0.001%
chr1_3734050_G_C	chr1:3734050	0.036	0.034	0.182	0.0013%
chr1_3740003_C_A	chr1:3740003	0.103	0.096	0.141	—
chr1_3717468_C_G	chr1:3717468	0.004	0.014	0.179	<0.001%
chr1_3739961_A_G	chr1:3739961	0.089	0.061	0.179	—
chr1_3739995_A_G	chr1:3739995	0.101	0.162	0.088	—
chr1_3733399_G_A	chr1:3733399	-0.043	-0.032	-0.176	0.068%
chr1_3733711_G_T	chr1:3733711	-0.071	-0.023	-0.176	0.0020%
chr1_3739949_T_G	chr1:3739949	0.057	0.076	0.176	—
chr1_3739963_T_G	chr1:3739963	0.095	0.091	0.174	—
chr1_3740012_T_C	chr1:3740012	0.072	0.041	0.174	—
chr1_3739984_A_T	chr1:3739984	0.097	0.089	0.135	—
chr1_3727465_T_G	chr1:3727465	-0.070	-0.038	-0.171	<0.001%
chr1_3733830_C_G	chr1:3733830	0.062	0.039	0.171	<0.001%
chr1_3739978_A_T	chr1:3739978	0.074	-0.003	0.171	—
chr1_3739979_C_A	chr1:3739979	0.095	0.005	0.168	<0.001%
chr1_3739986_C_A	chr1:3739986	0.095	0.086	0.150	—
chr1_3739994_T_C	chr1:3739994	0.095	0.076	0.132	—
chr1_3739983_T_C	chr1:3739983	0.094	0.046	0.165	—
chr1_3717459_G_T	chr1:3717459	-0.021	0.009	-0.165	0.0013%
chr1_3718154_C_A	chr1:3718154	0.091	0.004	0.165	0.014%
chr1_3724601_G_A	chr1:3724601	-0.056	-0.018	-0.165	<0.001%
chr1_3727413_G_A	chr1:3727413	0.063	0.042	0.165	0.0033%
chr1_3733709_C_T	chr1:3733709	-0.056	-0.094	-0.165	0.0013%
chr1_3733752_C_T	chr1:3733752	0.056	0.056	0.165	2.63%
chr1_3739963_T_A	chr1:3739963	0.093	0.213	0.094	—
chr1_3739982_C_A	chr1:3739982	0.093	-0.030	0.165	—
chr1_3739976_C_G	chr1:3739976	0.083	-0.071	0.162	—
chr1_3718222_G_A	chr1:3718222	0.048	0.002	0.159	0.0013%
chr1_3733945_T_A	chr1:3733945	0.032	0.058	0.159	<0.001%
chr1_3739988_A_G	chr1:3739988	0.090	0.261	0.091	—
chr1_3739953_A_G	chr1:3739953	0.089	0.048	0.156	—
chr1_3739989_A_G	chr1:3739989	0.089	0.107	0.147	—
chr1_3717512_A_G	chr1:3717512	0.060	0.042	0.156	<0.001%
chr1_3733743_C_A	chr1:3733743	0.088	0.142	0.118	<0.001%
chr1_3739980_C_A	chr1:3739980	0.086	0.102	0.156	—
chr1_3739987_T_A	chr1:3739987	0.082	-0.066	0.156	—
chr1_3740016_C_T	chr1:3740016	0.088	0.096	0.118	—
chr1_3718141_G_T	chr1:3718141	-0.087	-0.004	-0.082	<0.001%
chr1_3717549_G_C	chr1:3717549	0.038	-0.001	0.153	<0.001%
chr1_3717923_T_C	chr1:3717923	0.033	0.010	0.153	0.675%
chr1_3718143_G_A	chr1:3718143	0.087	0.003	0.106	0.027%
chr1_3727491_G_A	chr1:3727491	-0.078	-0.032	-0.153	0.0020%
chr1_3733049_G_A	chr1:3733049	0.005	0.049	0.153	<0.001%
chr1_3733336_C_T	chr1:3733336	-0.002	-0.005	-0.153	<0.001%
chr1_3733543_C_T	chr1:3733543	-0.057	-0.056	-0.153	<0.001%
chr1_3733569_G_A	chr1:3733569	-0.066	-0.102	-0.153	<0.001%
chr1_3733758_G_T	chr1:3733758	-0.028	-0.044	-0.153	<0.001%
chr1_3739954_C_G	chr1:3739954	0.057	-0.003	0.153	—
chr1_3739987_T_C	chr1:3739987	0.072	0.000	0.153	—
chr1_3739988_A_C	chr1:3739988	0.067	0.015	0.153	—
chr1_3739991_C_T	chr1:3739991	0.087	0.005	0.124	—
chr1_3739991_C_G	chr1:3739991	0.054	-0.086	0.150	—
chr1_3718211_C_T	chr1:3718211	-0.037	-0.016	-0.147	<0.001%
chr1_3718239_G_A	chr1:3718239	0.005	0.002	0.147	0.0013%
chr1_3724498_T_C	chr1:3724498	0.013	0.022	0.147	<0.001%
chr1_3739965_A_G	chr1:3739965	0.037	0.157	0.147	—
chr1_3740003_C_G	chr1:3740003	0.082	0.056	0.144	—
chr1_3740004_C_A	chr1:3740004	0.082	0.180	0.076	—
chr1_3717347_G_A	chr1:3717347	0.027	0.019	0.144	0.0026%
chr1_3717491_G_A	chr1:3717491	-0.037	-0.009	-0.144	0.0026%
chr1_3739993_G_T	chr1:3739993	0.027	0.249	-0.053	—

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.