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CHRNA2
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near CHRNA2
chr8:27,359,755..27,579,261, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr8_27362062_C_A | chr8:27362062 | 88,320 | 18,688 | 24,576 | — |
| chr8_27362094_C_A | chr8:27362094 | 86,144 | 17,920 | 25,856 | — |
| chr8_27362082_G_T | chr8:27362082 | 84,736 | 22,976 | 26,112 | — |
| chr8_27361983_T_A | chr8:27361983 | -77,440 | -18,560 | -26,880 | 6.6e-6 |
| chr8_27362155_C_T | chr8:27362155 | 77,312 | 16,672 | 18,304 | 6.6e-6 |
| chr8_27362197_A_G | chr8:27362197 | 68,288 | 25,056 | 19,328 | — |
| chr8_27362062_C_G | chr8:27362062 | 67,072 | 15,136 | 21,504 | — |
| chr8_27361982_G_A | chr8:27361982 | -64,896 | -17,552 | -24,320 | 1.3e-5 |
| chr8_27362083_G_T | chr8:27362083 | 63,232 | 19,040 | 16,128 | — |
| chr8_27362049_G_T | chr8:27362049 | 62,720 | 18,560 | 18,176 | — |
| chr8_27362153_T_G | chr8:27362153 | 61,120 | 10,656 | 20,224 | — |
| chr8_27362099_C_A | chr8:27362099 | -57,984 | -16,352 | -8,960 | — |
| chr8_27362095_T_G | chr8:27362095 | -57,088 | -15,520 | -15,872 | — |
| chr8_27362149_A_C | chr8:27362149 | 54,080 | 12,736 | 18,944 | — |
| chr8_27362075_C_A | chr8:27362075 | -52,224 | -12,320 | -19,456 | — |
| chr8_27362047_G_C | chr8:27362047 | -51,072 | -12,896 | -16,128 | — |
| chr8_27362147_T_G | chr8:27362147 | 50,816 | 9,632 | 19,968 | — |
| chr8_27362105_G_T | chr8:27362105 | 49,920 | 10,112 | 23,808 | — |
| chr8_27362142_T_A | chr8:27362142 | 49,856 | 9,728 | 14,592 | — |
| chr8_27362134_C_A | chr8:27362134 | 49,664 | 9,216 | 16,384 | — |
| chr8_27362079_T_G | chr8:27362079 | -48,000 | -7,776 | -16,896 | — |
| chr8_27362050_C_G | chr8:27362050 | -47,360 | -11,488 | -21,632 | — |
| chr8_27362102_T_G | chr8:27362102 | 47,360 | 12,352 | 25,344 | — |
| chr8_27362096_G_C | chr8:27362096 | -47,232 | -12,224 | -25,728 | — |
| chr8_27362053_G_A | chr8:27362053 | -46,592 | -11,456 | -20,992 | — |
| chr8_27362083_G_A | chr8:27362083 | -46,208 | -9,536 | -19,200 | — |
| chr8_27362095_T_A | chr8:27362095 | -45,952 | -13,056 | -16,896 | — |
| chr8_27362061_T_G | chr8:27362061 | 45,824 | 13,120 | 15,360 | — |
| chr8_27361992_G_A | chr8:27361992 | -45,184 | -12,256 | -17,152 | 3.3e-5 |
| chr8_27362053_G_C | chr8:27362053 | -44,800 | -11,360 | -19,200 | — |
| chr8_27362080_A_C | chr8:27362080 | -44,800 | -10,560 | -18,176 | — |
| chr8_27362114_T_G | chr8:27362114 | 44,160 | 10,816 | 16,896 | — |
| chr8_27362129_C_G | chr8:27362129 | -43,008 | -10,208 | -24,576 | — |
| chr8_27362079_T_A | chr8:27362079 | -42,240 | -8,768 | -14,848 | — |
| chr8_27362096_G_T | chr8:27362096 | -41,856 | -11,136 | -23,424 | — |
| chr8_27362050_C_T | chr8:27362050 | -41,472 | -11,520 | -18,816 | — |
| chr8_27362131_G_A | chr8:27362131 | -41,216 | -9,216 | -19,200 | — |
| chr8_27362067_G_T | chr8:27362067 | 41,088 | 25,728 | 15,872 | — |
| chr8_27362141_C_A | chr8:27362141 | -41,024 | -9,792 | -20,224 | — |
| chr8_27362101_G_T | chr8:27362101 | 40,704 | 10,624 | 19,200 | 6.6e-6 |
| chr8_27362050_C_A | chr8:27362050 | -40,192 | -11,136 | -16,000 | — |
| chr8_27362132_G_C | chr8:27362132 | -40,000 | -9,120 | -18,816 | — |
| chr8_27362131_G_C | chr8:27362131 | -39,680 | -7,904 | -17,408 | — |
| chr8_27362097_A_T | chr8:27362097 | -38,912 | -11,776 | -13,696 | — |
| chr8_27362167_A_G | chr8:27362167 | 38,400 | 7,008 | 17,664 | — |
| chr8_27362047_G_T | chr8:27362047 | -38,272 | -8,864 | -12,288 | — |
| chr8_27362099_C_G | chr8:27362099 | -37,760 | -9,472 | 4,352 | — |
| chr8_27362175_G_T | chr8:27362175 | -36,928 | -9,632 | -13,952 | — |
| chr8_27362169_C_G | chr8:27362169 | 36,800 | 9,792 | 14,848 | — |
| chr8_27362150_T_A | chr8:27362150 | 36,544 | 6,976 | 11,264 | — |
| chr8_27362250_C_A | chr8:27362250 | 36,352 | 992 | 1,280 | — |
| chr8_27362068_G_C | chr8:27362068 | -36,224 | -8,352 | -17,792 | — |
| chr8_27362160_C_T | chr8:27362160 | -35,968 | -6,768 | -6,784 | — |
| chr8_27362069_A_C | chr8:27362069 | 35,840 | 8,800 | 15,360 | — |
| chr8_27362142_T_C | chr8:27362142 | -35,520 | -7,904 | -12,032 | — |
| chr8_27362097_A_G | chr8:27362097 | -35,456 | -11,712 | -11,520 | — |
| chr8_27362099_C_T | chr8:27362099 | -35,456 | -9,984 | -4,096 | 2.0e-5 |
| chr8_27362163_G_T | chr8:27362163 | 35,328 | 14,688 | 36,224 | — |
| chr8_27362269_C_G | chr8:27362269 | -35,264 | -10,224 | 1,920 | — |
| chr8_27362048_G_C | chr8:27362048 | -34,048 | -9,344 | -12,800 | — |
| chr8_27362147_T_C | chr8:27362147 | -33,920 | -8,576 | -9,472 | — |
| chr8_27362057_T_C | chr8:27362057 | -33,408 | -8,544 | -13,568 | — |
| chr8_27362111_G_T | chr8:27362111 | 33,408 | 10,368 | 11,008 | — |
| chr8_27362193_G_C | chr8:27362193 | 33,280 | 11,424 | 12,288 | — |
| chr8_27362133_C_T | chr8:27362133 | -32,832 | -8,320 | -16,128 | — |
| chr8_27362181_A_G | chr8:27362181 | 32,576 | 8,224 | 7,296 | — |
| chr8_27362086_A_C | chr8:27362086 | -32,512 | -7,520 | -12,800 | — |
| chr8_27362126_G_T | chr8:27362126 | -32,448 | -8,352 | -11,904 | — |
| chr8_27362159_C_T | chr8:27362159 | -32,384 | -9,280 | -11,136 | — |
| chr8_27362092_C_G | chr8:27362092 | -32,128 | -9,632 | -13,824 | — |
| chr8_27362075_C_G | chr8:27362075 | -31,360 | -6,112 | -8,192 | — |
| chr8_27362028_C_A | chr8:27362028 | -31,232 | -7,616 | -12,544 | 6.6e-5 |
| chr8_27362075_C_T | chr8:27362075 | -31,232 | -6,592 | -12,032 | — |
| chr8_27362123_C_A | chr8:27362123 | -31,104 | -6,528 | -12,288 | — |
| chr8_27362184_G_T | chr8:27362184 | -30,848 | -7,856 | -14,464 | — |
| chr8_27362269_C_T | chr8:27362269 | -30,656 | -10,064 | -11,776 | — |
| chr8_27362183_G_C | chr8:27362183 | -30,592 | -6,464 | -7,936 | — |
| chr8_27362156_T_A | chr8:27362156 | -30,528 | -8,864 | -11,648 | — |
| chr8_27362055_C_T | chr8:27362055 | 30,464 | 7,872 | 8,704 | — |
| chr8_27362097_A_C | chr8:27362097 | -30,464 | -9,376 | -5,632 | — |
| chr8_27362046_A_T | chr8:27362046 | -30,208 | -8,736 | -12,288 | — |
| chr8_27362055_C_A | chr8:27362055 | 30,080 | 7,552 | 9,984 | — |
| chr8_27362269_C_A | chr8:27362269 | -29,952 | -10,096 | -16,896 | — |
| chr8_27362159_C_A | chr8:27362159 | -29,440 | -7,968 | -11,520 | — |
| chr8_27362138_A_T | chr8:27362138 | 29,120 | 5,344 | 13,824 | — |
| chr8_27362182_G_A | chr8:27362182 | -29,120 | -7,488 | -9,984 | — |
| chr8_27362060_T_A | chr8:27362060 | -28,928 | -7,712 | -14,080 | — |
| chr8_27362054_C_A | chr8:27362054 | 28,800 | 7,264 | 3,328 | — |
| chr8_27362103_C_G | chr8:27362103 | 28,672 | 9,536 | 9,984 | 6.6e-6 |
| chr8_27362268_C_G | chr8:27362268 | -28,544 | -8,912 | -11,136 | — |
| chr8_27362123_C_T | chr8:27362123 | -28,416 | -6,144 | -10,240 | — |
| chr8_27362089_A_C | chr8:27362089 | -28,288 | -7,488 | -12,672 | — |
| chr8_27362131_G_T | chr8:27362131 | -28,288 | -4,224 | -14,464 | — |
| chr8_27362158_A_C | chr8:27362158 | -28,224 | -8,608 | -11,008 | — |
| chr8_27362180_C_T | chr8:27362180 | -28,160 | -7,040 | -11,776 | — |
| chr8_27362079_T_C | chr8:27362079 | -27,904 | -3,744 | -7,680 | 2.0e-5 |
| chr8_27362182_G_C | chr8:27362182 | -27,584 | -6,336 | -7,296 | — |
| chr8_27362113_C_G | chr8:27362113 | 27,520 | 8,224 | 12,928 | — |
| chr8_27362175_G_C | chr8:27362175 | -27,456 | -6,816 | -10,240 | — |
| chr8_27362158_A_T | chr8:27362158 | -27,392 | -8,960 | -10,752 | — |
| chr8_27362048_G_T | chr8:27362048 | -27,264 | -7,936 | -13,056 | — |
| chr8_27362130_T_C | chr8:27362130 | -27,072 | -5,856 | -11,264 | — |
| chr8_27362060_T_G | chr8:27362060 | 26,880 | 6,208 | 7,680 | — |
| chr8_27362102_T_A | chr8:27362102 | 26,880 | 6,784 | 15,872 | — |
| chr8_27362145_T_G | chr8:27362145 | 26,816 | 10,816 | 9,600 | — |
| chr8_27362107_G_C | chr8:27362107 | 26,752 | 6,496 | 13,568 | — |
| chr8_27362179_G_A | chr8:27362179 | -26,688 | -6,784 | -7,296 | — |
| chr8_27362059_T_A | chr8:27362059 | -26,624 | -6,688 | -10,752 | — |
| chr8_27362123_C_G | chr8:27362123 | -26,624 | -5,280 | -9,984 | — |
| chr8_27362129_C_A | chr8:27362129 | -26,432 | -5,664 | -17,664 | — |
| chr8_27362076_T_C | chr8:27362076 | -26,368 | -4,928 | -8,960 | — |
| chr8_27362074_C_A | chr8:27362074 | -26,112 | -7,168 | -8,832 | — |
| chr8_27362156_T_G | chr8:27362156 | -26,112 | -8,000 | -8,064 | — |
| chr8_27362080_A_T | chr8:27362080 | -25,856 | -6,976 | -14,464 | — |
| chr8_27362126_G_C | chr8:27362126 | -25,856 | -6,144 | -7,936 | — |
| chr8_27362110_G_T | chr8:27362110 | -25,728 | -7,872 | 5,632 | — |
| chr8_27362287_T_C | chr8:27362287 | 25,344 | 3,680 | -256 | — |
| chr8_27362140_C_G | chr8:27362140 | -25,280 | -4,576 | -13,440 | — |
| chr8_27361970_A_G | chr8:27361970 | 25,216 | 7,008 | 13,568 | 5.9e-5 |
| chr8_27362048_G_A | chr8:27362048 | -25,216 | -6,976 | -9,856 | — |
| chr8_27362082_G_C | chr8:27362082 | -24,960 | -5,632 | -13,440 | — |
| chr8_27362085_C_G | chr8:27362085 | -24,960 | -7,008 | -11,008 | — |
| chr8_27362135_C_T | chr8:27362135 | 24,832 | 6,880 | 6,912 | — |
| chr8_27362143_C_G | chr8:27362143 | 24,832 | 3,520 | 10,496 | — |
| chr8_27362132_G_T | chr8:27362132 | -24,768 | -5,664 | -11,776 | — |
| chr8_27362052_G_C | chr8:27362052 | -24,320 | -6,784 | -9,728 | — |
| chr8_27362183_G_T | chr8:27362183 | -24,320 | -6,272 | -7,168 | — |
| chr8_27362157_G_C | chr8:27362157 | -24,256 | -7,840 | -9,344 | — |
| chr8_27362169_C_A | chr8:27362169 | 24,192 | 5,536 | 12,032 | — |
| chr8_27362170_A_G | chr8:27362170 | 24,192 | 7,776 | 14,208 | — |
| chr8_27362178_G_T | chr8:27362178 | -24,128 | -7,296 | -11,648 | — |
| chr8_27362129_C_T | chr8:27362129 | 24,064 | 5,600 | 7,680 | — |
| chr8_27362144_C_G | chr8:27362144 | 24,064 | 6,272 | 12,160 | 3.9e-5 |
| chr8_27362179_G_T | chr8:27362179 | -24,064 | -6,240 | -7,424 | — |
| chr8_27362140_C_A | chr8:27362140 | -23,936 | -4,800 | -10,112 | — |
| chr8_27362032_G_A | chr8:27362032 | 23,808 | 5,184 | 7,680 | 6.6e-6 |
| chr8_27361951_T_G | chr8:27361951 | -23,680 | -4,256 | -11,776 | 2.6e-5 |
| chr8_27362157_G_A | chr8:27362157 | -23,616 | -8,192 | -10,880 | — |
| chr8_27362065_T_C | chr8:27362065 | -23,552 | -6,368 | -9,216 | — |
| chr8_27362165_T_C | chr8:27362165 | -23,552 | -6,624 | -9,344 | — |
| chr8_27362072_T_A | chr8:27362072 | -23,424 | -5,600 | -9,216 | — |
| chr8_27362095_T_C | chr8:27362095 | -23,424 | -7,168 | -7,424 | — |
| chr8_27362162_A_C | chr8:27362162 | -23,296 | -5,216 | -10,368 | — |
| chr8_27362182_G_T | chr8:27362182 | -23,296 | -6,560 | -8,448 | — |
| chr8_27362088_A_T | chr8:27362088 | -23,040 | -5,920 | -8,960 | — |
| chr8_27362111_G_A | chr8:27362111 | 23,040 | 7,200 | 6,144 | — |
| chr8_27362171_T_C | chr8:27362171 | 22,912 | 6,368 | 3,584 | — |
| chr8_27362159_C_G | chr8:27362159 | -22,848 | -6,560 | -2,560 | — |
| chr8_27361968_C_T | chr8:27361968 | -22,656 | -5,568 | -8,448 | 1.3e-5 |
| chr8_27362069_A_G | chr8:27362069 | -22,656 | -5,472 | -9,728 | — |
| chr8_27362103_C_T | chr8:27362103 | 22,656 | 4,768 | 5,632 | — |
| chr8_27362157_G_T | chr8:27362157 | -22,592 | -6,560 | -8,576 | — |
| chr8_27362089_A_T | chr8:27362089 | -22,528 | -6,368 | -10,624 | — |
| chr8_27362139_G_C | chr8:27362139 | 22,528 | 9,664 | 4,608 | — |
| chr8_27362156_T_C | chr8:27362156 | -22,528 | -6,944 | -8,704 | — |
| chr8_27362133_C_G | chr8:27362133 | -22,336 | -5,280 | -9,984 | 6.6e-6 |
| chr8_27362118_C_G | chr8:27362118 | 22,272 | 6,688 | 8,704 | — |
| chr8_27362183_G_A | chr8:27362183 | -22,208 | -5,056 | -5,504 | — |
| chr8_27361973_T_C | chr8:27361973 | -22,144 | -5,408 | -7,168 | 3.9e-5 |
| chr8_27362082_G_A | chr8:27362082 | -22,144 | -5,216 | -10,752 | — |
| chr8_27362047_G_A | chr8:27362047 | -22,016 | -4,800 | -4,608 | — |
| chr8_27362098_C_G | chr8:27362098 | -22,016 | -7,744 | -4,608 | — |
| chr8_27362204_G_C | chr8:27362204 | -22,016 | -5,168 | -9,344 | — |
| chr8_27362150_T_G | chr8:27362150 | 21,888 | 3,776 | 6,912 | — |
| chr8_27362070_T_G | chr8:27362070 | 21,760 | 5,920 | 7,936 | — |
| chr8_27362111_G_C | chr8:27362111 | 21,760 | 7,424 | 8,704 | — |
| chr8_27362078_T_A | chr8:27362078 | 21,632 | 3,008 | 7,168 | — |
| chr8_27362083_G_C | chr8:27362083 | -21,632 | -2,176 | -12,032 | — |
| chr8_27362154_G_T | chr8:27362154 | -21,568 | -7,296 | -11,776 | — |
| chr8_27362055_C_G | chr8:27362055 | 21,504 | 5,504 | 7,424 | — |
| chr8_27361869_G_A | chr8:27361869 | -21,184 | 5,600 | 6,912 | 6.6e-6 |
| chr8_27362070_T_A | chr8:27362070 | 20,864 | 6,560 | 11,008 | — |
| chr8_27362143_C_A | chr8:27362143 | 20,864 | 2,432 | 7,424 | — |
| chr8_27362177_A_G | chr8:27362177 | 20,736 | 5,760 | 4,096 | — |
| chr8_27362158_A_G | chr8:27362158 | -20,608 | -7,680 | -6,272 | — |
| chr8_27362184_G_A | chr8:27362184 | -20,608 | -5,536 | -7,296 | — |
| chr8_27362195_A_T | chr8:27362195 | 20,480 | 3,360 | 640 | — |
| chr8_27362112_C_G | chr8:27362112 | 20,352 | 6,496 | 8,192 | — |
| chr8_27362052_G_T | chr8:27362052 | 20,224 | 5,664 | 3,328 | — |
| chr8_27362101_G_A | chr8:27362101 | 20,224 | 2,720 | 10,752 | 9.2e-5 |
| chr8_27362130_T_G | chr8:27362130 | -20,160 | -3,456 | -9,472 | — |
| chr8_27362162_A_T | chr8:27362162 | -19,968 | -4,960 | -8,704 | — |
| chr8_27362268_C_T | chr8:27362268 | -19,904 | -6,800 | -10,368 | — |
| chr8_27362057_T_A | chr8:27362057 | -19,840 | -5,568 | -8,064 | — |
| chr8_27362061_T_A | chr8:27362061 | 19,840 | 6,880 | 3,584 | — |
| chr8_27362098_C_A | chr8:27362098 | -19,840 | -6,848 | -3,712 | — |
| chr8_27362141_C_T | chr8:27362141 | -19,840 | -1,568 | -5,248 | — |
| chr8_27362046_A_G | chr8:27362046 | -19,712 | -4,608 | -8,192 | — |
| chr8_27362267_A_T | chr8:27362267 | -19,648 | -7,936 | -7,680 | — |
| chr8_27362177_A_T | chr8:27362177 | -19,520 | -5,168 | -4,864 | — |
| chr8_27361897_C_T | chr8:27361897 | -19,456 | -4,768 | -8,192 | 2.6e-5 |
| chr8_27362058_G_A | chr8:27362058 | -19,328 | -5,088 | -9,216 | — |
| chr8_27362087_C_A | chr8:27362087 | -19,328 | -5,248 | -7,168 | — |
| chr8_27362091_T_A | chr8:27362091 | -19,200 | -4,320 | -4,864 | — |
| chr8_27362098_C_T | chr8:27362098 | -19,200 | -6,688 | -7,680 | — |
| chr8_27362298_G_A | chr8:27362298 | -16,000 | -1,920 | -19,968 | 3.3e-5 |
| chr8_27362303_A_T | chr8:27362303 | -12,416 | -1,456 | -19,712 | — |
| chr8_27362266_G_T | chr8:27362266 | -12,288 | -3,424 | -19,840 | — |
| chr8_27362266_G_C | chr8:27362266 | -9,984 | -2,960 | -20,992 | — |
| chr8_27362297_T_A | chr8:27362297 | -9,408 | -32 | -20,736 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.