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CHRNA2
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near CHRNA2
chr8:27,359,755..27,579,261, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr8_27362062_C_A | chr8:27362062 | 1.000 | 1.000 | 1.000 | — |
| chr8_27362094_C_A | chr8:27362094 | 1.000 | 1.000 | 1.000 | — |
| chr8_27362082_G_T | chr8:27362082 | 1.000 | 1.000 | 1.000 | — |
| chr8_27361983_T_A | chr8:27361983 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr8_27362155_C_T | chr8:27362155 | 1.000 | 1.000 | 0.841 | <0.001% |
| chr8_27362197_A_G | chr8:27362197 | 1.000 | 1.000 | 0.888 | — |
| chr8_27362062_C_G | chr8:27362062 | 1.000 | 1.000 | 0.988 | — |
| chr8_27361982_G_A | chr8:27361982 | -1.000 | -1.000 | -1.000 | 0.0013% |
| chr8_27362083_G_T | chr8:27362083 | 1.000 | 1.000 | 0.741 | — |
| chr8_27362049_G_T | chr8:27362049 | 1.000 | 1.000 | 0.835 | — |
| chr8_27362153_T_G | chr8:27362153 | 1.000 | 0.845 | 0.929 | — |
| chr8_27362099_C_A | chr8:27362099 | -1.000 | -1.000 | -0.412 | — |
| chr8_27362095_T_G | chr8:27362095 | -1.000 | -1.000 | -0.729 | — |
| chr8_27362149_A_C | chr8:27362149 | 1.000 | 1.000 | 0.871 | — |
| chr8_27362075_C_A | chr8:27362075 | -1.000 | -0.977 | -0.894 | — |
| chr8_27362047_G_C | chr8:27362047 | -1.000 | -1.000 | -0.741 | — |
| chr8_27362147_T_G | chr8:27362147 | 1.000 | 0.764 | 0.918 | — |
| chr8_27362105_G_T | chr8:27362105 | 1.000 | 0.802 | 1.000 | — |
| chr8_27362142_T_A | chr8:27362142 | 1.000 | 0.772 | 0.671 | — |
| chr8_27362134_C_A | chr8:27362134 | 1.000 | 0.731 | 0.753 | — |
| chr8_27362079_T_G | chr8:27362079 | -1.000 | -0.617 | -0.776 | — |
| chr8_27362050_C_G | chr8:27362050 | -1.000 | -0.911 | -0.994 | — |
| chr8_27362102_T_G | chr8:27362102 | 1.000 | 0.980 | 1.000 | — |
| chr8_27362096_G_C | chr8:27362096 | -1.000 | -0.970 | -1.000 | — |
| chr8_27362053_G_A | chr8:27362053 | -1.000 | -0.909 | -0.965 | — |
| chr8_27362083_G_A | chr8:27362083 | -1.000 | -0.756 | -0.882 | — |
| chr8_27362095_T_A | chr8:27362095 | -1.000 | -1.000 | -0.776 | — |
| chr8_27362061_T_G | chr8:27362061 | 1.000 | 1.000 | 0.706 | — |
| chr8_27361992_G_A | chr8:27361992 | -1.000 | -0.972 | -0.788 | 0.0033% |
| chr8_27362053_G_C | chr8:27362053 | -1.000 | -0.901 | -0.882 | — |
| chr8_27362080_A_C | chr8:27362080 | -1.000 | -0.838 | -0.835 | — |
| chr8_27362114_T_G | chr8:27362114 | 1.000 | 0.858 | 0.776 | — |
| chr8_27362129_C_G | chr8:27362129 | -1.000 | -0.810 | -1.000 | — |
| chr8_27362079_T_A | chr8:27362079 | -1.000 | -0.695 | -0.682 | — |
| chr8_27362096_G_T | chr8:27362096 | -1.000 | -0.883 | -1.000 | — |
| chr8_27362050_C_T | chr8:27362050 | -1.000 | -0.914 | -0.865 | — |
| chr8_27362131_G_A | chr8:27362131 | -1.000 | -0.731 | -0.882 | — |
| chr8_27362067_G_T | chr8:27362067 | 1.000 | 1.000 | 0.729 | — |
| chr8_27362141_C_A | chr8:27362141 | -1.000 | -0.777 | -0.929 | — |
| chr8_27362101_G_T | chr8:27362101 | 1.000 | 0.843 | 0.882 | <0.001% |
| chr8_27362050_C_A | chr8:27362050 | -1.000 | -0.883 | -0.735 | — |
| chr8_27362132_G_C | chr8:27362132 | -1.000 | -0.723 | -0.865 | — |
| chr8_27362131_G_C | chr8:27362131 | -1.000 | -0.627 | -0.800 | — |
| chr8_27362097_A_T | chr8:27362097 | -1.000 | -0.934 | -0.629 | — |
| chr8_27362167_A_G | chr8:27362167 | 0.998 | 0.556 | 0.812 | — |
| chr8_27362047_G_T | chr8:27362047 | -0.995 | -0.703 | -0.565 | — |
| chr8_27362099_C_G | chr8:27362099 | -0.982 | -0.751 | 0.200 | — |
| chr8_27362175_G_T | chr8:27362175 | -0.960 | -0.764 | -0.641 | — |
| chr8_27362169_C_G | chr8:27362169 | 0.957 | 0.777 | 0.682 | — |
| chr8_27362150_T_A | chr8:27362150 | 0.950 | 0.553 | 0.518 | — |
| chr8_27362250_C_A | chr8:27362250 | 0.945 | 0.079 | 0.059 | — |
| chr8_27362068_G_C | chr8:27362068 | -0.942 | -0.662 | -0.818 | — |
| chr8_27362163_G_T | chr8:27362163 | 0.918 | 1.000 | 1.000 | — |
| chr8_27362160_C_T | chr8:27362160 | -0.935 | -0.537 | -0.312 | — |
| chr8_27362069_A_C | chr8:27362069 | 0.932 | 0.698 | 0.706 | — |
| chr8_27362142_T_C | chr8:27362142 | -0.923 | -0.627 | -0.553 | — |
| chr8_27362097_A_G | chr8:27362097 | -0.922 | -0.929 | -0.529 | — |
| chr8_27362099_C_T | chr8:27362099 | -0.922 | -0.792 | -0.188 | 0.0020% |
| chr8_27362269_C_G | chr8:27362269 | -0.917 | -0.811 | 0.088 | — |
| chr8_27362048_G_C | chr8:27362048 | -0.885 | -0.741 | -0.588 | — |
| chr8_27362147_T_C | chr8:27362147 | -0.882 | -0.680 | -0.435 | — |
| chr8_27362057_T_C | chr8:27362057 | -0.869 | -0.678 | -0.624 | — |
| chr8_27362111_G_T | chr8:27362111 | 0.869 | 0.822 | 0.506 | — |
| chr8_27362193_G_C | chr8:27362193 | 0.865 | 0.906 | 0.565 | — |
| chr8_27362133_C_T | chr8:27362133 | -0.854 | -0.660 | -0.741 | — |
| chr8_27362181_A_G | chr8:27362181 | 0.847 | 0.652 | 0.335 | — |
| chr8_27362086_A_C | chr8:27362086 | -0.845 | -0.596 | -0.588 | — |
| chr8_27362126_G_T | chr8:27362126 | -0.844 | -0.662 | -0.547 | — |
| chr8_27362159_C_T | chr8:27362159 | -0.842 | -0.736 | -0.512 | — |
| chr8_27362092_C_G | chr8:27362092 | -0.835 | -0.764 | -0.635 | — |
| chr8_27362075_C_G | chr8:27362075 | -0.815 | -0.485 | -0.376 | — |
| chr8_27362028_C_A | chr8:27362028 | -0.812 | -0.604 | -0.576 | 0.0066% |
| chr8_27362075_C_T | chr8:27362075 | -0.812 | -0.523 | -0.553 | — |
| chr8_27362123_C_A | chr8:27362123 | -0.809 | -0.518 | -0.565 | — |
| chr8_27362184_G_T | chr8:27362184 | -0.802 | -0.623 | -0.665 | — |
| chr8_27362269_C_T | chr8:27362269 | -0.797 | -0.798 | -0.541 | — |
| chr8_27362183_G_C | chr8:27362183 | -0.795 | -0.513 | -0.365 | — |
| chr8_27362156_T_A | chr8:27362156 | -0.794 | -0.703 | -0.535 | — |
| chr8_27362055_C_T | chr8:27362055 | 0.792 | 0.624 | 0.400 | — |
| chr8_27362097_A_C | chr8:27362097 | -0.792 | -0.744 | -0.259 | — |
| chr8_27362046_A_T | chr8:27362046 | -0.785 | -0.693 | -0.565 | — |
| chr8_27362055_C_A | chr8:27362055 | 0.782 | 0.599 | 0.459 | — |
| chr8_27362269_C_A | chr8:27362269 | -0.779 | -0.801 | -0.776 | — |
| chr8_27362159_C_A | chr8:27362159 | -0.765 | -0.632 | -0.529 | — |
| chr8_27362138_A_T | chr8:27362138 | 0.757 | 0.424 | 0.635 | — |
| chr8_27362182_G_A | chr8:27362182 | -0.757 | -0.594 | -0.459 | — |
| chr8_27362060_T_A | chr8:27362060 | -0.752 | -0.612 | -0.647 | — |
| chr8_27362054_C_A | chr8:27362054 | 0.749 | 0.576 | 0.153 | — |
| chr8_27362103_C_G | chr8:27362103 | 0.745 | 0.756 | 0.459 | <0.001% |
| chr8_27362268_C_G | chr8:27362268 | -0.742 | -0.707 | -0.512 | — |
| chr8_27362123_C_T | chr8:27362123 | -0.739 | -0.487 | -0.471 | — |
| chr8_27362089_A_C | chr8:27362089 | -0.735 | -0.594 | -0.582 | — |
| chr8_27362131_G_T | chr8:27362131 | -0.735 | -0.335 | -0.665 | — |
| chr8_27362158_A_C | chr8:27362158 | -0.734 | -0.683 | -0.506 | — |
| chr8_27362180_C_T | chr8:27362180 | -0.732 | -0.558 | -0.541 | — |
| chr8_27362079_T_C | chr8:27362079 | -0.725 | -0.297 | -0.353 | 0.0020% |
| chr8_27362182_G_C | chr8:27362182 | -0.717 | -0.503 | -0.335 | — |
| chr8_27362113_C_G | chr8:27362113 | 0.715 | 0.652 | 0.594 | — |
| chr8_27362175_G_C | chr8:27362175 | -0.714 | -0.541 | -0.471 | — |
| chr8_27362158_A_T | chr8:27362158 | -0.712 | -0.711 | -0.494 | — |
| chr8_27362048_G_T | chr8:27362048 | -0.709 | -0.629 | -0.600 | — |
| chr8_27362130_T_C | chr8:27362130 | -0.704 | -0.464 | -0.518 | — |
| chr8_27362060_T_G | chr8:27362060 | 0.699 | 0.492 | 0.353 | — |
| chr8_27362102_T_A | chr8:27362102 | 0.699 | 0.538 | 0.729 | — |
| chr8_27362145_T_G | chr8:27362145 | 0.697 | 0.858 | 0.441 | — |
| chr8_27362107_G_C | chr8:27362107 | 0.696 | 0.515 | 0.624 | — |
| chr8_27362179_G_A | chr8:27362179 | -0.694 | -0.538 | -0.335 | — |
| chr8_27362059_T_A | chr8:27362059 | -0.692 | -0.530 | -0.494 | — |
| chr8_27362123_C_G | chr8:27362123 | -0.692 | -0.419 | -0.459 | — |
| chr8_27362129_C_A | chr8:27362129 | -0.687 | -0.449 | -0.812 | — |
| chr8_27362076_T_C | chr8:27362076 | -0.686 | -0.391 | -0.412 | — |
| chr8_27362074_C_A | chr8:27362074 | -0.679 | -0.569 | -0.406 | — |
| chr8_27362156_T_G | chr8:27362156 | -0.679 | -0.635 | -0.371 | — |
| chr8_27362080_A_T | chr8:27362080 | -0.672 | -0.553 | -0.665 | — |
| chr8_27362126_G_C | chr8:27362126 | -0.672 | -0.487 | -0.365 | — |
| chr8_27362110_G_T | chr8:27362110 | -0.669 | -0.624 | 0.259 | — |
| chr8_27362287_T_C | chr8:27362287 | 0.659 | 0.292 | -0.012 | — |
| chr8_27362140_C_G | chr8:27362140 | -0.657 | -0.363 | -0.618 | — |
| chr8_27361970_A_G | chr8:27361970 | 0.656 | 0.556 | 0.624 | 0.0059% |
| chr8_27362048_G_A | chr8:27362048 | -0.656 | -0.553 | -0.453 | — |
| chr8_27362082_G_C | chr8:27362082 | -0.649 | -0.447 | -0.618 | — |
| chr8_27362085_C_G | chr8:27362085 | -0.649 | -0.556 | -0.506 | — |
| chr8_27362135_C_T | chr8:27362135 | 0.646 | 0.546 | 0.318 | — |
| chr8_27362143_C_G | chr8:27362143 | 0.646 | 0.279 | 0.482 | — |
| chr8_27362132_G_T | chr8:27362132 | -0.644 | -0.449 | -0.541 | — |
| chr8_27362052_G_C | chr8:27362052 | -0.632 | -0.538 | -0.447 | — |
| chr8_27362183_G_T | chr8:27362183 | -0.632 | -0.497 | -0.329 | — |
| chr8_27362157_G_C | chr8:27362157 | -0.631 | -0.622 | -0.429 | — |
| chr8_27362169_C_A | chr8:27362169 | 0.629 | 0.439 | 0.553 | — |
| chr8_27362170_A_G | chr8:27362170 | 0.629 | 0.617 | 0.653 | — |
| chr8_27362178_G_T | chr8:27362178 | -0.627 | -0.579 | -0.535 | — |
| chr8_27362129_C_T | chr8:27362129 | 0.626 | 0.444 | 0.353 | — |
| chr8_27362144_C_G | chr8:27362144 | 0.626 | 0.497 | 0.559 | 0.0039% |
| chr8_27362179_G_T | chr8:27362179 | -0.626 | -0.495 | -0.341 | — |
| chr8_27362140_C_A | chr8:27362140 | -0.622 | -0.381 | -0.465 | — |
| chr8_27362032_G_A | chr8:27362032 | 0.619 | 0.411 | 0.353 | <0.001% |
| chr8_27361951_T_G | chr8:27361951 | -0.616 | -0.338 | -0.541 | 0.0026% |
| chr8_27362157_G_A | chr8:27362157 | -0.614 | -0.650 | -0.500 | — |
| chr8_27362065_T_C | chr8:27362065 | -0.612 | -0.505 | -0.424 | — |
| chr8_27362165_T_C | chr8:27362165 | -0.612 | -0.525 | -0.429 | — |
| chr8_27362072_T_A | chr8:27362072 | -0.609 | -0.444 | -0.424 | — |
| chr8_27362095_T_C | chr8:27362095 | -0.609 | -0.569 | -0.341 | — |
| chr8_27362162_A_C | chr8:27362162 | -0.606 | -0.414 | -0.476 | — |
| chr8_27362182_G_T | chr8:27362182 | -0.606 | -0.520 | -0.388 | — |
| chr8_27362088_A_T | chr8:27362088 | -0.599 | -0.470 | -0.412 | — |
| chr8_27362111_G_A | chr8:27362111 | 0.599 | 0.571 | 0.282 | — |
| chr8_27362171_T_C | chr8:27362171 | 0.596 | 0.505 | 0.165 | — |
| chr8_27362159_C_G | chr8:27362159 | -0.594 | -0.520 | -0.118 | — |
| chr8_27361968_C_T | chr8:27361968 | -0.589 | -0.442 | -0.388 | 0.0013% |
| chr8_27362069_A_G | chr8:27362069 | -0.589 | -0.434 | -0.447 | — |
| chr8_27362103_C_T | chr8:27362103 | 0.589 | 0.378 | 0.259 | — |
| chr8_27362157_G_T | chr8:27362157 | -0.587 | -0.520 | -0.394 | — |
| chr8_27362089_A_T | chr8:27362089 | -0.586 | -0.505 | -0.488 | — |
| chr8_27362139_G_C | chr8:27362139 | 0.586 | 0.766 | 0.212 | — |
| chr8_27362156_T_C | chr8:27362156 | -0.586 | -0.551 | -0.400 | — |
| chr8_27362133_C_G | chr8:27362133 | -0.581 | -0.419 | -0.459 | <0.001% |
| chr8_27362118_C_G | chr8:27362118 | 0.579 | 0.530 | 0.400 | — |
| chr8_27362183_G_A | chr8:27362183 | -0.577 | -0.401 | -0.253 | — |
| chr8_27361973_T_C | chr8:27361973 | -0.576 | -0.429 | -0.329 | 0.0039% |
| chr8_27362082_G_A | chr8:27362082 | -0.576 | -0.414 | -0.494 | — |
| chr8_27362047_G_A | chr8:27362047 | -0.572 | -0.381 | -0.212 | — |
| chr8_27362098_C_G | chr8:27362098 | -0.572 | -0.614 | -0.212 | — |
| chr8_27362204_G_C | chr8:27362204 | -0.572 | -0.410 | -0.429 | — |
| chr8_27362150_T_G | chr8:27362150 | 0.569 | 0.299 | 0.318 | — |
| chr8_27362070_T_G | chr8:27362070 | 0.566 | 0.470 | 0.365 | — |
| chr8_27362111_G_C | chr8:27362111 | 0.566 | 0.589 | 0.400 | — |
| chr8_27362078_T_A | chr8:27362078 | 0.562 | 0.239 | 0.329 | — |
| chr8_27362083_G_C | chr8:27362083 | -0.562 | -0.173 | -0.553 | — |
| chr8_27362154_G_T | chr8:27362154 | -0.561 | -0.579 | -0.541 | — |
| chr8_27362055_C_G | chr8:27362055 | 0.559 | 0.437 | 0.341 | — |
| chr8_27361869_G_A | chr8:27361869 | -0.551 | 0.444 | 0.318 | <0.001% |
| chr8_27362266_G_C | chr8:27362266 | -0.260 | -0.235 | -0.965 | — |
| chr8_27362070_T_A | chr8:27362070 | 0.542 | 0.520 | 0.506 | — |
| chr8_27362143_C_A | chr8:27362143 | 0.542 | 0.193 | 0.341 | — |
| chr8_27362177_A_G | chr8:27362177 | 0.539 | 0.457 | 0.188 | — |
| chr8_27362297_T_A | chr8:27362297 | -0.245 | -0.003 | -0.953 | — |
| chr8_27362158_A_G | chr8:27362158 | -0.536 | -0.609 | -0.288 | — |
| chr8_27362184_G_A | chr8:27362184 | -0.536 | -0.439 | -0.335 | — |
| chr8_27362195_A_T | chr8:27362195 | 0.532 | 0.266 | 0.029 | — |
| chr8_27362112_C_G | chr8:27362112 | 0.529 | 0.515 | 0.376 | — |
| chr8_27362052_G_T | chr8:27362052 | 0.526 | 0.449 | 0.153 | — |
| chr8_27362101_G_A | chr8:27362101 | 0.526 | 0.216 | 0.494 | 0.0092% |
| chr8_27362130_T_G | chr8:27362130 | -0.524 | -0.274 | -0.435 | — |
| chr8_27362162_A_T | chr8:27362162 | -0.519 | -0.393 | -0.400 | — |
| chr8_27362298_G_A | chr8:27362298 | -0.416 | -0.152 | -0.918 | 0.0033% |
| chr8_27362268_C_T | chr8:27362268 | -0.517 | -0.539 | -0.476 | — |
| chr8_27362057_T_A | chr8:27362057 | -0.516 | -0.442 | -0.371 | — |
| chr8_27362061_T_A | chr8:27362061 | 0.516 | 0.546 | 0.165 | — |
| chr8_27362098_C_A | chr8:27362098 | -0.516 | -0.543 | -0.171 | — |
| chr8_27362141_C_T | chr8:27362141 | -0.516 | -0.124 | -0.241 | — |
| chr8_27362266_G_T | chr8:27362266 | -0.319 | -0.272 | -0.912 | — |
| chr8_27362046_A_G | chr8:27362046 | -0.512 | -0.365 | -0.376 | — |
| chr8_27362303_A_T | chr8:27362303 | -0.323 | -0.115 | -0.906 | — |
| chr8_27362267_A_T | chr8:27362267 | -0.511 | -0.629 | -0.353 | — |
| chr8_27362177_A_T | chr8:27362177 | -0.507 | -0.410 | -0.224 | — |
| chr8_27361897_C_T | chr8:27361897 | -0.506 | -0.378 | -0.376 | 0.0026% |
| chr8_27362058_G_A | chr8:27362058 | -0.502 | -0.404 | -0.424 | — |
| chr8_27362087_C_A | chr8:27362087 | -0.502 | -0.416 | -0.329 | — |
| chr8_27362091_T_A | chr8:27362091 | -0.499 | -0.343 | -0.224 | — |
| chr8_27362098_C_T | chr8:27362098 | -0.499 | -0.530 | -0.353 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.