Home / Gene

CLPTM1L

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near CLPTM1L

chr5:1,217,751..1,445,099, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr5_1316302_G_A	chr5:1316302	1.000	1.000	1.000	0.0020%
chr5_1316408_C_T	chr5:1316408	-1.000	-1.000	-1.000	<0.001%
chr5_1316406_C_T	chr5:1316406	-1.000	-1.000	-1.000	0.0033%
chr5_1316469_A_T	chr5:1316469	-0.744	-0.569	-1.000	0.0026%
chr5_1295113_G_A	chr5:1295113	0.149	0.129	1.000	0.012%
chr5_1235579_C_T	chr5:1235579	0.803	0.396	1.000	<0.001%
chr5_1247052_C_T	chr5:1247052	-0.695	-0.013	-0.471	0.040%
chr5_1316071_A_G	chr5:1316071	-0.481	-0.594	-0.612	0.030%
chr5_1316431_T_C	chr5:1316431	0.351	0.259	0.841	0.0013%
chr5_1295115_G_A	chr5:1295115	0.100	0.077	0.818	<0.001%
chr5_1316306_C_T	chr5:1316306	0.456	0.485	0.565	<0.001%
chr5_1295114_G_T	chr5:1295114	0.065	0.061	0.785	0.0013%
chr5_1316460_G_A	chr5:1316460	-0.344	-0.211	-0.776	0.0020%
chr5_1295293_A_G	chr5:1295293	-0.077	-0.082	-0.771	0.0033%
chr5_1316084_G_A	chr5:1316084	0.433	0.530	0.682	0.0020%
chr5_1295140_G_A	chr5:1295140	0.106	0.060	0.735	<0.001%
chr5_1218020_A_C	chr5:1218020	-0.024	-0.124	-0.732	0.055%
chr5_1316286_A_C	chr5:1316286	-0.409	-0.490	-0.471	0.0013%
chr5_1316323_T_C	chr5:1316323	-0.406	-0.449	-0.647	<0.001%
chr5_1295128_G_A	chr5:1295128	0.090	0.053	0.712	0.0013%
chr5_1316328_A_G	chr5:1316328	-0.394	-0.424	-0.441	<0.001%
chr5_1331276_G_A	chr5:1331276	0.388	0.383	0.541	0.020%
chr5_1247100_C_A	chr5:1247100	0.374	0.132	0.271	0.0020%
chr5_1247050_G_A	chr5:1247050	-0.365	-0.015	-0.300	0.0066%
chr5_1316478_C_T	chr5:1316478	-0.266	-0.162	-0.641	0.0020%
chr5_1247031_C_G	chr5:1247031	-0.337	-0.052	-0.347	<0.001%
chr5_1316156_C_T	chr5:1316156	-0.336	-0.289	-0.588	0.0013%
chr5_1316282_G_C	chr5:1316282	-0.334	-0.350	-0.359	<0.001%
chr5_1316312_T_A	chr5:1316312	-0.328	-0.259	-0.494	<0.001%
chr5_1316438_G_A	chr5:1316438	0.323	0.558	0.553	<0.001%
chr5_1295125_G_A	chr5:1295125	0.079	0.048	0.562	<0.001%
chr5_1295126_G_T	chr5:1295126	0.072	0.036	0.559	<0.001%
chr5_1316110_C_G	chr5:1316110	0.309	0.178	0.376	<0.001%
chr5_1316298_G_A	chr5:1316298	-0.309	-0.317	-0.365	0.0020%
chr5_1218048_C_G	chr5:1218048	0.126	0.125	0.541	0.0046%
chr5_1295052_T_C	chr5:1295052	-0.048	-0.046	-0.532	<0.001%
chr5_1315773_C_T	chr5:1315773	0.235	0.454	0.529	0.131%
chr5_1316445_C_T	chr5:1316445	0.298	0.180	0.400	<0.001%
chr5_1316475_C_T	chr5:1316475	-0.130	-0.142	-0.524	<0.001%
chr5_1315734_G_A	chr5:1315734	-0.175	-0.228	-0.512	0.0013%
chr5_1247001_C_G	chr5:1247001	0.287	0.065	0.218	<0.001%
chr5_1316165_T_C	chr5:1316165	0.226	0.112	0.494	0.0020%
chr5_1246980_G_A	chr5:1246980	0.279	0.047	0.100	<0.001%
chr5_1295167_G_A	chr5:1295167	0.011	0.069	0.479	<0.001%
chr5_1295073_G_A	chr5:1295073	-0.094	-0.046	-0.453	0.0013%
chr5_1295071_C_T	chr5:1295071	-0.083	-0.044	-0.447	<0.001%
chr5_1316432_G_A	chr5:1316432	0.010	-0.008	0.447	<0.001%
chr5_1316522_G_A	chr5:1316522	0.253	0.244	0.247	0.0026%
chr5_1316315_C_T	chr5:1316315	0.251	0.360	0.318	0.0026%
chr5_1295882_C_T	chr5:1295882	-0.093	-0.222	-0.441	<0.001%
chr5_1247000_C_T	chr5:1247000	0.249	0.036	0.088	<0.001%
chr5_1295227_A_T	chr5:1295227	-0.005	-0.020	-0.438	0.0053%
chr5_1295046_T_G	chr5:1295046	0.081	0.025	0.435	0.0055%
chr5_1295136_A_T	chr5:1295136	-0.056	-0.049	-0.432	0.047%
chr5_1295877_C_A	chr5:1295877	-0.082	-0.198	-0.424	<0.001%
chr5_1316153_T_A	chr5:1316153	-0.236	-0.198	-0.294	<0.001%
chr5_1316253_C_G	chr5:1316253	0.236	0.249	0.406	<0.001%
chr5_1316064_A_T	chr5:1316064	-0.235	-0.289	-0.224	0.0026%
chr5_1247017_G_C	chr5:1247017	-0.226	-0.026	-0.212	<0.001%
chr5_1295309_G_A	chr5:1295309	0.012	0.042	0.400	0.0039%
chr5_1295344_G_A	chr5:1295344	-0.012	0.044	0.400	<0.001%
chr5_1295329_C_T	chr5:1295329	0.001	0.036	0.391	0.0013%
chr5_1294787_G_T	chr5:1294787	0.018	0.032	0.388	<0.001%
chr5_1294861_G_A	chr5:1294861	0.023	0.035	0.388	0.0059%
chr5_1294995_G_T	chr5:1294995	0.060	0.025	0.382	0.0020%
chr5_1218057_A_C	chr5:1218057	0.019	-0.011	-0.376	0.011%
chr5_1295113_G_C	chr5:1295113	0.032	0.016	0.371	<0.001%
chr5_1316452_C_A	chr5:1316452	0.183	0.122	0.371	0.0053%
chr5_1295101_G_A	chr5:1295101	0.034	0.051	0.368	0.0039%
chr5_1218045_C_A	chr5:1218045	-0.006	0.056	0.365	<0.001%
chr5_1316365_A_G	chr5:1316365	0.205	0.086	0.318	<0.001%
chr5_1294990_C_G	chr5:1294990	0.018	0.010	0.359	<0.001%
chr5_1295021_G_C	chr5:1295021	0.203	0.067	-0.056	0.0026%
chr5_1295318_G_A	chr5:1295318	0.014	0.025	0.353	0.0013%
chr5_1315972_G_A	chr5:1315972	0.198	0.058	0.265	<0.001%
chr5_1246986_G_T	chr5:1246986	0.197	0.041	0.076	<0.001%
chr5_1294994_G_A	chr5:1294994	0.056	0.006	0.347	<0.001%
chr5_1295025_G_A	chr5:1295025	0.062	0.041	0.347	<0.001%
chr5_1316359_C_A	chr5:1316359	-0.196	-0.211	-0.282	0.0013%
chr5_1316379_T_A	chr5:1316379	0.180	0.294	0.347	0.496%
chr5_1246937_G_A	chr5:1246937	0.196	0.085	0.247	<0.001%
chr5_1295317_G_T	chr5:1295317	0.016	0.033	0.344	0.0013%
chr5_1247043_C_T	chr5:1247043	-0.193	-0.011	-0.206	0.0046%
chr5_1316459_C_T	chr5:1316459	0.193	0.525	0.035	0.0020%
chr5_1294998_T_C	chr5:1294998	-0.015	-0.035	-0.335	0.0033%
chr5_1295316_C_T	chr5:1295316	0.014	0.037	0.335	0.024%
chr5_1218048_C_T	chr5:1218048	-0.001	0.063	0.332	<0.001%
chr5_1316517_T_C	chr5:1316517	0.188	0.079	0.100	0.0026%
chr5_1218051_C_G	chr5:1218051	0.009	0.022	0.329	0.0072%
chr5_1247170_T_G	chr5:1247170	-0.186	-0.049	-0.271	0.0039%
chr5_1295479_G_T	chr5:1295479	0.066	0.063	0.329	<0.001%
chr5_1294876_C_T	chr5:1294876	0.021	0.026	0.326	<0.001%
chr5_1294978_A_G	chr5:1294978	-0.019	-0.028	-0.326	<0.001%
chr5_1295020_C_G	chr5:1295020	0.161	0.051	-0.324	0.0013%
chr5_1315733_C_T	chr5:1315733	-0.078	-0.112	-0.324	<0.001%
chr5_1315746_G_A	chr5:1315746	0.150	0.152	0.324	<0.001%
chr5_1315851_C_T	chr5:1315851	-0.168	-0.198	-0.318	0.0072%
chr5_1294914_T_C	chr5:1294914	-0.010	-0.018	-0.315	<0.001%
chr5_1218022_C_G	chr5:1218022	0.072	0.034	0.312	0.0033%
chr5_1294797_G_T	chr5:1294797	0.017	0.029	0.312	0.0020%
chr5_1295285_G_T	chr5:1295285	0.031	0.033	0.312	<0.001%
chr5_1295341_C_T	chr5:1295341	-0.007	0.043	0.312	0.047%
chr5_1295919_A_C	chr5:1295919	0.128	0.189	0.312	<0.001%
chr5_1315839_G_A	chr5:1315839	0.000	0.041	0.312	<0.001%
chr5_1316064_A_G	chr5:1316064	-0.176	-0.226	-0.235	<0.001%
chr5_1316538_T_A	chr5:1316538	-0.028	-0.005	-0.312	<0.001%
chr5_1295107_C_T	chr5:1295107	-0.064	-0.016	-0.309	0.0053%
chr5_1316479_G_A	chr5:1316479	-0.115	-0.056	-0.300	<0.001%
chr5_1316511_C_G	chr5:1316511	-0.007	-0.025	-0.300	<0.001%
chr5_1247166_C_T	chr5:1247166	-0.169	-0.035	-0.253	0.0013%
chr5_1235581_G_C	chr5:1235581	-0.168	-0.109	-0.265	<0.001%
chr5_1247006_C_T	chr5:1247006	-0.168	-0.006	-0.282	<0.001%
chr5_1295226_C_T	chr5:1295226	0.004	-0.007	-0.297	<0.001%
chr5_1294846_G_T	chr5:1294846	0.019	0.034	0.294	<0.001%
chr5_1316292_G_A	chr5:1316292	-0.166	-0.127	-0.212	<0.001%
chr5_1295198_C_T	chr5:1295198	-0.056	-0.022	-0.288	0.0020%
chr5_1316157_G_A	chr5:1316157	-0.163	-0.084	-0.253	<0.001%
chr5_1316157_G_C	chr5:1316157	-0.163	-0.051	-0.253	<0.001%
chr5_1316504_G_C	chr5:1316504	0.085	-0.030	0.288	<0.001%
chr5_1295130_C_T	chr5:1295130	0.054	0.017	0.285	0.0040%
chr5_1294840_C_T	chr5:1294840	0.012	0.033	0.282	0.0026%
chr5_1294844_G_A	chr5:1294844	0.003	0.000	0.282	0.0013%
chr5_1294913_G_A	chr5:1294913	0.024	0.023	0.282	<0.001%
chr5_1295350_C_T	chr5:1295350	-0.001	0.029	0.282	0.0020%
chr5_1295936_G_A	chr5:1295936	-0.074	-0.157	-0.282	<0.001%
chr5_1316102_C_T	chr5:1316102	-0.160	-0.201	-0.176	<0.001%
chr5_1316197_C_A	chr5:1316197	-0.083	-0.051	-0.282	<0.001%
chr5_1247118_T_C	chr5:1247118	0.156	0.040	0.106	0.0013%
chr5_1294843_C_T	chr5:1294843	0.015	0.024	0.276	<0.001%
chr5_1295012_G_A	chr5:1295012	0.037	0.022	0.276	<0.001%
chr5_1295870_C_T	chr5:1295870	-0.078	-0.166	-0.276	0.0013%
chr5_1315681_T_G	chr5:1315681	0.101	0.154	0.276	<0.001%
chr5_1316184_C_T	chr5:1316184	-0.133	-0.096	-0.271	0.0020%
chr5_1295177_C_A	chr5:1295177	-0.065	-0.030	-0.268	<0.001%
chr5_1295211_C_T	chr5:1295211	0.015	0.010	0.268	<0.001%
chr5_1294993_G_T	chr5:1294993	0.050	0.026	0.265	<0.001%
chr5_1315814_G_A	chr5:1315814	-0.125	-0.084	-0.265	<0.001%
chr5_1316450_A_G	chr5:1316450	0.093	0.053	0.265	0.012%
chr5_1235578_C_G	chr5:1235578	-0.130	-0.077	-0.259	<0.001%
chr5_1316486_A_G	chr5:1316486	0.146	0.066	0.153	<0.001%
chr5_1295949_G_A	chr5:1295949	0.146	0.203	0.241	<0.001%
chr5_1247126_A_C	chr5:1247126	-0.145	-0.017	-0.206	<0.001%
chr5_1218046_C_T	chr5:1218046	-0.007	0.055	0.253	0.0036%
chr5_1295331_C_G	chr5:1295331	0.032	0.033	0.253	<0.001%
chr5_1315554_C_A	chr5:1315554	-0.136	-0.126	-0.253	<0.001%
chr5_1315909_T_G	chr5:1315909	0.101	0.099	0.253	<0.001%
chr5_1315580_G_A	chr5:1315580	-0.141	-0.143	-0.200	<0.001%
chr5_1316346_G_A	chr5:1316346	-0.141	-0.173	-0.147	0.0013%
chr5_1316380_G_A	chr5:1316380	-0.141	-0.246	-0.247	0.020%
chr5_1295027_A_C	chr5:1295027	-0.021	-0.017	-0.247	0.0020%
chr5_1316239_C_A	chr5:1316239	0.130	0.223	0.247	<0.001%
chr5_1218063_T_C	chr5:1218063	-0.019	-0.034	-0.244	0.0014%
chr5_1247170_T_C	chr5:1247170	-0.137	-0.038	-0.241	0.035%
chr5_1247133_C_A	chr5:1247133	-0.136	-0.045	-0.165	<0.001%
chr5_1295107_C_A	chr5:1295107	0.024	0.032	0.241	0.0020%
chr5_1295340_G_A	chr5:1295340	-0.009	0.025	0.241	0.0046%
chr5_1295281_C_A	chr5:1295281	0.024	0.041	0.238	0.014%
chr5_1316289_G_A	chr5:1316289	-0.135	-0.185	-0.182	0.011%
chr5_1295343_C_T	chr5:1295343	0.000	0.033	0.235	0.0020%
chr5_1316626_A_T	chr5:1316626	0.003	0.157	0.235	0.0079%
chr5_1331138_A_C	chr5:1331138	0.003	-0.052	-0.235	<0.001%
chr5_1294842_G_A	chr5:1294842	0.005	0.020	0.232	<0.001%
chr5_1294776_G_T	chr5:1294776	-0.002	0.012	0.229	<0.001%
chr5_1316301_C_T	chr5:1316301	-0.130	-0.069	-0.176	0.0013%
chr5_1316481_A_G	chr5:1316481	0.128	0.129	0.135	<0.001%
chr5_1246977_G_A	chr5:1246977	0.091	0.058	0.224	<0.001%
chr5_1295307_G_A	chr5:1295307	0.011	0.019	0.224	<0.001%
chr5_1315759_C_G	chr5:1315759	-0.090	-0.079	-0.224	0.0013%
chr5_1316142_C_G	chr5:1316142	-0.126	-0.124	-0.165	0.0013%
chr5_1316145_G_C	chr5:1316145	0.106	-0.005	0.224	0.014%
chr5_1247005_G_A	chr5:1247005	-0.124	-0.018	-0.135	0.0020%
chr5_1294483_C_T	chr5:1294483	0.009	0.015	0.218	0.024%
chr5_1294945_G_A	chr5:1294945	0.010	0.019	0.218	0.0020%
chr5_1315521_C_T	chr5:1315521	0.123	0.154	0.206	<0.001%
chr5_1316556_C_A	chr5:1316556	-0.030	-0.084	-0.218	0.0026%
chr5_1247112_G_A	chr5:1247112	0.121	0.025	0.094	<0.001%
chr5_1316492_C_A	chr5:1316492	-0.121	-0.104	-0.176	<0.001%
chr5_1246770_C_T	chr5:1246770	0.014	0.043	0.212	0.0013%
chr5_1294465_G_A	chr5:1294465	0.021	0.018	0.212	<0.001%
chr5_1295068_G_A	chr5:1295068	0.023	0.025	0.212	<0.001%
chr5_1295322_T_A	chr5:1295322	0.031	0.011	0.212	0.0040%
chr5_1295375_C_A	chr5:1295375	0.004	0.017	0.212	0.055%
chr5_1295436_G_T	chr5:1295436	-0.011	-0.025	-0.212	<0.001%
chr5_1295925_G_C	chr5:1295925	0.017	0.053	0.212	<0.001%
chr5_1315702_C_T	chr5:1315702	0.070	-0.041	0.212	0.0020%
chr5_1315755_G_A	chr5:1315755	0.120	0.086	0.129	<0.001%
chr5_1316118_T_G	chr5:1316118	0.120	0.091	0.188	<0.001%
chr5_1316179_G_T	chr5:1316179	-0.120	-0.096	-0.188	<0.001%
chr5_1316316_G_A	chr5:1316316	-0.120	-0.074	-0.171	0.0013%
chr5_1316505_T_A	chr5:1316505	0.073	0.003	0.212	<0.001%
chr5_1247105_A_G	chr5:1247105	0.119	0.037	0.141	0.0039%
chr5_1294879_C_A	chr5:1294879	0.007	0.024	0.209	<0.001%
chr5_1295090_G_T	chr5:1295090	-0.081	-0.002	-0.209	0.0053%
chr5_1316359_C_G	chr5:1316359	0.118	0.195	0.194	<0.001%
chr5_1218054_C_T	chr5:1218054	0.011	0.022	0.206	0.0039%
chr5_1294565_G_A	chr5:1294565	0.080	0.039	0.206	<0.001%
chr5_1294802_C_T	chr5:1294802	-0.002	0.022	0.206	<0.001%
chr5_1295294_G_T	chr5:1295294	0.007	0.027	0.206	0.0033%
chr5_1295337_C_G	chr5:1295337	0.005	-0.026	-0.206	2.58%
chr5_1316082_G_A	chr5:1316082	-0.116	-0.137	-0.059	0.0033%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.