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CNTLN
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near CNTLN
chr9:17,035,039..17,603,923, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr9_17134979_G_C | chr9:17134979 | -1.000 | -0.868 | -1.000 | — |
| chr9_17134976_C_G | chr9:17134976 | -1.000 | -0.855 | -1.000 | — |
| chr9_17134979_G_T | chr9:17134979 | -1.000 | -0.695 | -1.000 | — |
| chr9_17134980_C_G | chr9:17134980 | -0.993 | -0.518 | -1.000 | — |
| chr9_17135041_A_C | chr9:17135041 | 1.000 | 1.000 | 1.000 | — |
| chr9_17134976_C_A | chr9:17134976 | -0.894 | -0.584 | -1.000 | — |
| chr9_17134980_C_A | chr9:17134980 | -0.654 | -0.343 | -1.000 | — |
| chr9_17134975_G_C | chr9:17134975 | -1.000 | -0.530 | -1.000 | — |
| chr9_17134981_G_A | chr9:17134981 | -0.820 | -0.495 | -1.000 | — |
| chr9_17134976_C_T | chr9:17134976 | -0.787 | -0.464 | -1.000 | — |
| chr9_17134979_G_A | chr9:17134979 | -0.682 | -0.398 | -1.000 | — |
| chr9_17135021_G_T | chr9:17135021 | -0.825 | -0.538 | -1.000 | — |
| chr9_17134961_G_C | chr9:17134961 | 0.300 | 0.168 | 1.000 | — |
| chr9_17063737_C_A | chr9:17063737 | -1.000 | -0.480 | -0.557 | <0.001% |
| chr9_17134910_C_G | chr9:17134910 | -1.000 | -0.607 | -0.894 | 0.0020% |
| chr9_17134982_C_G | chr9:17134982 | -0.681 | -0.393 | -1.000 | — |
| chr9_17134982_C_A | chr9:17134982 | -0.584 | -0.386 | -1.000 | — |
| chr9_17134974_C_T | chr9:17134974 | -0.514 | -0.272 | -1.000 | — |
| chr9_17063745_C_A | chr9:17063745 | -1.000 | -0.447 | -0.594 | 0.0033% |
| chr9_17135014_A_G | chr9:17135014 | 1.000 | 0.226 | 1.000 | <0.001% |
| chr9_17135022_G_A | chr9:17135022 | -0.719 | -0.409 | -1.000 | — |
| chr9_17134963_G_A | chr9:17134963 | 0.033 | 0.117 | 1.000 | 0.0053% |
| chr9_17135021_G_C | chr9:17135021 | -0.529 | -0.175 | -1.000 | — |
| chr9_17134975_G_T | chr9:17134975 | -0.584 | -0.266 | -1.000 | <0.001% |
| chr9_17135022_G_T | chr9:17135022 | -0.562 | -0.294 | -1.000 | — |
| chr9_17057936_C_G | chr9:17057936 | -0.853 | -1.000 | -1.000 | <0.001% |
| chr9_17134909_C_T | chr9:17134909 | -0.845 | -0.558 | -0.588 | <0.001% |
| chr9_17134911_C_G | chr9:17134911 | -0.839 | -0.584 | -0.529 | <0.001% |
| chr9_17134981_G_C | chr9:17134981 | -0.491 | -0.234 | -1.000 | — |
| chr9_17134978_T_A | chr9:17134978 | -0.439 | -0.272 | -1.000 | — |
| chr9_17134910_C_T | chr9:17134910 | -0.830 | -0.604 | -0.482 | <0.001% |
| chr9_17134977_A_T | chr9:17134977 | -0.511 | -0.282 | -1.000 | — |
| chr9_17134973_G_C | chr9:17134973 | -0.522 | -0.086 | -1.000 | — |
| chr9_17135025_G_A | chr9:17135025 | -0.516 | -0.081 | -1.000 | — |
| chr9_17134973_G_T | chr9:17134973 | -0.481 | -0.104 | -1.000 | — |
| chr9_17134961_G_A | chr9:17134961 | 0.326 | -0.028 | 1.000 | — |
| chr9_17134980_C_T | chr9:17134980 | -0.318 | -0.175 | -1.000 | — |
| chr9_17134923_G_A | chr9:17134923 | -0.739 | -0.530 | -0.600 | 0.0013% |
| chr9_17135020_A_T | chr9:17135020 | -0.483 | -0.218 | -1.000 | <0.001% |
| chr9_17135027_G_T | chr9:17135027 | -0.413 | -0.168 | -1.000 | — |
| chr9_17135037_G_C | chr9:17135037 | 0.351 | 0.411 | 1.000 | <0.001% |
| chr9_17135022_G_C | chr9:17135022 | -0.216 | -0.201 | -1.000 | — |
| chr9_17134875_C_T | chr9:17134875 | -0.692 | -0.429 | -0.424 | 0.035% |
| chr9_17134964_A_T | chr9:17134964 | 0.684 | 0.279 | 1.000 | — |
| chr9_17135024_G_C | chr9:17135024 | -0.449 | -0.107 | -1.000 | — |
| chr9_17134877_T_A | chr9:17134877 | -0.662 | -0.457 | -0.376 | <0.001% |
| chr9_17134964_A_C | chr9:17134964 | 0.654 | 0.343 | 0.847 | — |
| chr9_17135024_G_T | chr9:17135024 | -0.592 | -0.142 | -1.000 | — |
| chr9_17135011_G_C | chr9:17135011 | 0.150 | 0.234 | 1.000 | — |
| chr9_17134959_G_C | chr9:17134959 | 0.612 | 0.183 | 1.000 | — |
| chr9_17134965_A_C | chr9:17134965 | 0.411 | 0.129 | 1.000 | — |
| chr9_17135020_A_C | chr9:17135020 | -0.426 | -0.183 | -1.000 | — |
| chr9_17134925_C_T | chr9:17134925 | -0.604 | -0.434 | -0.200 | <0.001% |
| chr9_17134959_G_A | chr9:17134959 | 0.354 | -0.008 | 1.000 | — |
| chr9_17134959_G_T | chr9:17134959 | 0.594 | 0.119 | 0.565 | <0.001% |
| chr9_17134902_C_T | chr9:17134902 | -0.587 | -0.345 | -0.200 | 0.0013% |
| chr9_17134977_A_C | chr9:17134977 | -0.361 | -0.246 | -1.000 | — |
| chr9_17063734_C_A | chr9:17063734 | -0.581 | -0.239 | -0.204 | <0.001% |
| chr9_17134961_G_T | chr9:17134961 | 0.577 | 0.084 | 0.518 | — |
| chr9_17134911_C_A | chr9:17134911 | 0.549 | 0.284 | 1.000 | <0.001% |
| chr9_17135024_G_A | chr9:17135024 | -0.439 | -0.018 | -1.000 | 0.0013% |
| chr9_17134977_A_G | chr9:17134977 | -0.361 | -0.178 | -1.000 | — |
| chr9_17135027_G_A | chr9:17135027 | -0.326 | -0.117 | -0.988 | 0.0059% |
| chr9_17135023_T_G | chr9:17135023 | 0.556 | 0.426 | -0.059 | — |
| chr9_17135027_G_C | chr9:17135027 | -0.220 | 0.102 | -0.965 | — |
| chr9_17134958_G_T | chr9:17134958 | 0.539 | 0.185 | 0.929 | — |
| chr9_17134974_C_A | chr9:17134974 | -0.384 | -0.157 | -0.953 | — |
| chr9_17134978_T_G | chr9:17134978 | -0.300 | -0.183 | -0.953 | — |
| chr9_17134911_C_T | chr9:17134911 | -0.536 | -0.381 | -0.376 | <0.001% |
| chr9_17134974_C_G | chr9:17134974 | -0.324 | -0.074 | -0.929 | — |
| chr9_17135026_A_T | chr9:17135026 | -0.276 | -0.147 | -0.929 | — |
| chr9_17135025_G_C | chr9:17135025 | -0.150 | -0.099 | -0.918 | — |
| chr9_17135042_C_G | chr9:17135042 | 0.141 | 0.076 | 0.918 | — |
| chr9_17135031_C_A | chr9:17135031 | 0.369 | 0.277 | 0.906 | — |
| chr9_17057950_G_A | chr9:17057950 | 0.506 | 0.746 | 0.718 | <0.001% |
| chr9_17134964_A_G | chr9:17134964 | 0.433 | 0.135 | 0.894 | — |
| chr9_17134916_G_T | chr9:17134916 | -0.499 | -0.299 | -0.365 | <0.001% |
| chr9_17134967_A_C | chr9:17134967 | 0.306 | 0.127 | 0.882 | — |
| chr9_17134975_G_A | chr9:17134975 | -0.341 | -0.150 | -0.882 | — |
| chr9_17135032_C_A | chr9:17135032 | 0.426 | 0.168 | 0.882 | — |
| chr9_17134978_T_C | chr9:17134978 | -0.260 | -0.147 | -0.871 | — |
| chr9_17135021_G_A | chr9:17135021 | -0.489 | -0.099 | -0.671 | <0.001% |
| chr9_17135019_G_C | chr9:17135019 | 0.369 | 0.246 | -0.859 | — |
| chr9_17135045_G_A | chr9:17135045 | 0.483 | -0.180 | 0.659 | — |
| chr9_17134981_G_T | chr9:17134981 | -0.359 | -0.173 | -0.847 | — |
| chr9_17135049_C_T | chr9:17135049 | 0.478 | 0.391 | 0.612 | <0.001% |
| chr9_17135039_G_T | chr9:17135039 | 0.017 | 0.640 | -0.835 | — |
| chr9_17134885_C_T | chr9:17134885 | 0.466 | 0.147 | 0.318 | <0.001% |
| chr9_17134962_G_A | chr9:17134962 | 0.456 | 0.122 | 0.824 | 0.0020% |
| chr9_17135029_T_G | chr9:17135029 | -0.293 | 0.038 | -0.824 | — |
| chr9_17057948_C_T | chr9:17057948 | -0.462 | -0.454 | -0.529 | <0.001% |
| chr9_17134963_G_C | chr9:17134963 | 0.389 | 0.132 | 0.812 | — |
| chr9_17134991_G_C | chr9:17134991 | -0.185 | 0.043 | 0.800 | <0.001% |
| chr9_17135018_G_T | chr9:17135018 | -0.409 | -0.061 | -0.800 | — |
| chr9_17134954_C_G | chr9:17134954 | -0.035 | 0.066 | 0.788 | — |
| chr9_17134963_G_T | chr9:17134963 | 0.388 | 0.112 | 0.788 | — |
| chr9_17134898_T_A | chr9:17134898 | -0.443 | -0.264 | -0.376 | <0.001% |
| chr9_17135023_T_C | chr9:17135023 | 0.343 | 0.157 | 0.776 | <0.001% |
| chr9_17134950_C_G | chr9:17134950 | -0.433 | -0.081 | -0.471 | — |
| chr9_17135033_A_G | chr9:17135033 | 0.156 | 0.152 | 0.765 | — |
| chr9_17134966_A_C | chr9:17134966 | 0.429 | 0.066 | 0.682 | — |
| chr9_17057905_G_A | chr9:17057905 | -0.428 | -0.527 | -0.635 | 43.2% |
| chr9_17135026_A_C | chr9:17135026 | -0.236 | -0.147 | -0.753 | — |
| chr9_17135028_T_C | chr9:17135028 | 0.213 | 0.048 | 0.753 | — |
| chr9_17082599_A_C | chr9:17082599 | 0.422 | 0.132 | 0.499 | <0.001% |
| chr9_17134955_C_A | chr9:17134955 | -0.419 | -0.043 | -0.271 | — |
| chr9_17134967_A_T | chr9:17134967 | 0.200 | 0.076 | 0.741 | — |
| chr9_17134995_C_G | chr9:17134995 | -0.150 | -0.061 | -0.741 | — |
| chr9_17057970_A_C | chr9:17057970 | 0.416 | 0.546 | 0.588 | <0.001% |
| chr9_17134952_G_T | chr9:17134952 | -0.088 | -0.066 | -0.729 | — |
| chr9_17134999_C_T | chr9:17134999 | -0.037 | 0.124 | 0.718 | — |
| chr9_17135028_T_G | chr9:17135028 | -0.309 | 0.008 | -0.718 | — |
| chr9_17135029_T_A | chr9:17135029 | -0.140 | -0.114 | -0.718 | — |
| chr9_17135025_G_T | chr9:17135025 | -0.186 | -0.041 | -0.706 | — |
| chr9_17135039_G_A | chr9:17135039 | -0.078 | 0.112 | 0.694 | 0.0013% |
| chr9_17134994_C_G | chr9:17134994 | -0.200 | -0.178 | -0.671 | — |
| chr9_17134995_C_A | chr9:17134995 | -0.060 | -0.053 | -0.671 | — |
| chr9_17057910_G_C | chr9:17057910 | -0.377 | -0.461 | -0.571 | <0.001% |
| chr9_17135012_G_C | chr9:17135012 | 0.201 | 0.165 | 0.659 | — |
| chr9_17135032_C_G | chr9:17135032 | 0.240 | 0.246 | 0.659 | — |
| chr9_17057945_A_G | chr9:17057945 | -0.371 | -0.346 | -0.576 | <0.001% |
| chr9_17057949_A_G | chr9:17057949 | -0.368 | -0.368 | -0.500 | 0.0013% |
| chr9_17134999_C_G | chr9:17134999 | -0.368 | 0.076 | -0.365 | — |
| chr9_17135018_G_C | chr9:17135018 | -0.203 | -0.086 | -0.647 | — |
| chr9_17057971_C_T | chr9:17057971 | -0.317 | -0.354 | -0.644 | <0.001% |
| chr9_17134992_T_G | chr9:17134992 | -0.160 | -0.162 | -0.635 | — |
| chr9_17135016_A_G | chr9:17135016 | -0.356 | -0.094 | -0.565 | <0.001% |
| chr9_17057907_G_A | chr9:17057907 | -0.354 | -0.395 | -0.621 | 0.0013% |
| chr9_17135013_G_C | chr9:17135013 | 0.261 | 0.195 | 0.624 | — |
| chr9_17134962_G_T | chr9:17134962 | 0.349 | 0.071 | 0.318 | — |
| chr9_17134965_A_T | chr9:17134965 | 0.270 | -0.033 | 0.612 | — |
| chr9_17135019_G_A | chr9:17135019 | -0.346 | -0.114 | -0.388 | — |
| chr9_17134893_C_A | chr9:17134893 | 0.339 | 0.216 | 0.118 | <0.001% |
| chr9_17135030_T_A | chr9:17135030 | 0.196 | 0.155 | 0.600 | — |
| chr9_17134957_A_T | chr9:17134957 | -0.336 | -0.104 | 0.529 | — |
| chr9_17134952_G_A | chr9:17134952 | 0.331 | 0.069 | 0.141 | <0.001% |
| chr9_17135048_C_A | chr9:17135048 | 0.246 | 0.061 | 0.576 | — |
| chr9_17134899_G_C | chr9:17134899 | -0.323 | -0.266 | -0.294 | <0.001% |
| chr9_17134952_G_C | chr9:17134952 | -0.321 | -0.094 | -0.188 | — |
| chr9_17134966_A_T | chr9:17134966 | 0.316 | -0.023 | 0.306 | — |
| chr9_17134995_C_T | chr9:17134995 | 0.030 | -0.023 | -0.553 | — |
| chr9_17135032_C_T | chr9:17135032 | 0.309 | 0.152 | 0.388 | — |
| chr9_17134965_A_G | chr9:17134965 | 0.306 | 0.056 | 0.482 | — |
| chr9_17135008_T_G | chr9:17135008 | 0.193 | 0.155 | 0.541 | 0.0026% |
| chr9_17135028_T_A | chr9:17135028 | -0.180 | -0.119 | -0.541 | — |
| chr9_17134958_G_C | chr9:17134958 | 0.304 | 0.142 | 0.247 | — |
| chr9_17134950_C_T | chr9:17134950 | -0.303 | -0.107 | -0.435 | <0.001% |
| chr9_17134993_T_C | chr9:17134993 | -0.188 | -0.198 | -0.529 | — |
| chr9_17135040_A_C | chr9:17135040 | 0.261 | 0.464 | 0.529 | — |
| chr9_17135000_T_C | chr9:17135000 | -0.296 | -0.084 | -0.447 | — |
| chr9_17134990_C_A | chr9:17134990 | -0.070 | 0.094 | 0.518 | — |
| chr9_17057870_A_G | chr9:17057870 | 0.291 | 0.378 | 0.456 | 0.0020% |
| chr9_17134990_C_G | chr9:17134990 | -0.291 | 0.046 | -0.071 | — |
| chr9_17134955_C_T | chr9:17134955 | -0.288 | -0.104 | -0.071 | — |
| chr9_17135038_G_T | chr9:17135038 | 0.205 | 0.221 | 0.506 | — |
| chr9_17135043_T_G | chr9:17135043 | 0.235 | 0.046 | 0.494 | — |
| chr9_17135013_G_T | chr9:17135013 | 0.218 | 0.142 | 0.482 | — |
| chr9_17135029_T_C | chr9:17135029 | 0.226 | 0.008 | 0.482 | — |
| chr9_17135045_G_T | chr9:17135045 | 0.273 | 0.107 | 0.306 | — |
| chr9_17135020_A_G | chr9:17135020 | 0.270 | 0.124 | 0.471 | — |
| chr9_17134992_T_A | chr9:17134992 | 0.027 | -0.127 | -0.471 | — |
| chr9_17135031_C_G | chr9:17135031 | 0.243 | 0.228 | 0.471 | — |
| chr9_17135048_C_T | chr9:17135048 | 0.125 | -0.025 | 0.471 | — |
| chr9_17134958_G_A | chr9:17134958 | 0.265 | 0.084 | 0.200 | — |
| chr9_17134863_C_G | chr9:17134863 | -0.263 | -0.025 | -0.106 | <0.001% |
| chr9_17134940_C_T | chr9:17134940 | -0.261 | -0.157 | -0.212 | <0.001% |
| chr9_17134985_T_G | chr9:17134985 | -0.210 | -0.025 | -0.447 | — |
| chr9_17134991_G_A | chr9:17134991 | 0.111 | -0.142 | -0.447 | — |
| chr9_17135037_G_T | chr9:17135037 | 0.156 | 0.201 | 0.447 | — |
| chr9_17134831_A_C | chr9:17134831 | 0.250 | 0.160 | 0.294 | <0.001% |
| chr9_17135019_G_T | chr9:17135019 | 0.250 | 0.249 | 0.294 | — |
| chr9_17134953_G_A | chr9:17134953 | -0.246 | -0.104 | -0.153 | — |
| chr9_17134996_G_A | chr9:17134996 | 0.025 | -0.089 | -0.435 | 0.0013% |
| chr9_17135007_G_T | chr9:17135007 | -0.246 | -0.020 | -0.271 | — |
| chr9_17057921_C_T | chr9:17057921 | 0.240 | 0.376 | 0.297 | 43.2% |
| chr9_17135015_A_T | chr9:17135015 | -0.133 | -0.162 | -0.424 | — |
| chr9_17135035_C_T | chr9:17135035 | 0.153 | -0.038 | 0.424 | — |
| chr9_17134912_G_T | chr9:17134912 | -0.236 | -0.089 | -0.224 | 0.0020% |
| chr9_17135008_T_C | chr9:17135008 | 0.236 | 0.071 | 0.318 | 0.0013% |
| chr9_17082541_A_G | chr9:17082541 | 0.235 | 0.284 | 0.150 | 0.0020% |
| chr9_17134992_T_C | chr9:17134992 | -0.040 | -0.135 | -0.412 | — |
| chr9_17135003_C_A | chr9:17135003 | -0.067 | -0.013 | -0.412 | — |
| chr9_17135012_G_T | chr9:17135012 | 0.228 | 0.109 | 0.388 | — |
| chr9_17063750_T_C | chr9:17063750 | -0.227 | -0.038 | -0.019 | <0.001% |
| chr9_17057886_T_A | chr9:17057886 | 0.226 | 0.320 | 0.309 | <0.001% |
| chr9_17134983_G_A | chr9:17134983 | 0.200 | 0.046 | 0.400 | 0.0099% |
| chr9_17135010_G_T | chr9:17135010 | -0.103 | -0.127 | -0.400 | — |
| chr9_17135037_G_A | chr9:17135037 | 0.087 | 0.041 | 0.400 | 0.0013% |
| chr9_17134960_C_T | chr9:17134960 | 0.220 | 0.109 | -0.059 | — |
| chr9_17134966_A_G | chr9:17134966 | 0.190 | -0.043 | 0.388 | — |
| chr9_17134906_T_C | chr9:17134906 | -0.216 | -0.107 | -0.118 | 0.0013% |
| chr9_17134955_C_G | chr9:17134955 | -0.216 | -0.122 | 0.176 | — |
| chr9_17057990_A_G | chr9:17057990 | -0.214 | -0.263 | -0.271 | <0.001% |
| chr9_17134894_G_C | chr9:17134894 | -0.213 | 0.003 | -0.106 | 0.0033% |
| chr9_17134954_C_T | chr9:17134954 | -0.213 | 0.241 | 0.188 | — |
| chr9_17134996_G_C | chr9:17134996 | -0.040 | -0.122 | -0.376 | — |
| chr9_17134846_G_A | chr9:17134846 | 0.210 | 0.104 | 0.071 | 0.0020% |
| chr9_17134941_G_T | chr9:17134941 | -0.105 | -0.074 | -0.365 | 0.0026% |
| chr9_17135004_C_A | chr9:17135004 | 0.000 | -0.030 | -0.365 | <0.001% |
| chr9_17135009_T_G | chr9:17135009 | 0.063 | 0.147 | 0.365 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.