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COL21A1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near COL21A1
chr6:55,956,589..56,494,128, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr6_56399889_T_A | chr6:56399889 | -1.000 | -1.000 | -1.000 | — |
| chr6_56399929_T_G | chr6:56399929 | -1.000 | -1.000 | -1.000 | — |
| chr6_56399823_T_G | chr6:56399823 | -1.000 | -1.000 | -1.000 | 0.0024% |
| chr6_56399719_C_T | chr6:56399719 | -1.000 | -1.000 | -0.971 | — |
| chr6_56399728_A_T | chr6:56399728 | -1.000 | -1.000 | -0.876 | — |
| chr6_56399720_A_T | chr6:56399720 | -1.000 | -1.000 | -0.888 | — |
| chr6_56399925_T_G | chr6:56399925 | -1.000 | -1.000 | -1.000 | — |
| chr6_56399921_T_A | chr6:56399921 | -1.000 | -1.000 | -0.776 | — |
| chr6_56399718_T_G | chr6:56399718 | -1.000 | -1.000 | -0.600 | — |
| chr6_56399765_G_C | chr6:56399765 | -1.000 | -1.000 | -0.588 | — |
| chr6_56399889_T_G | chr6:56399889 | -1.000 | -1.000 | -0.835 | — |
| chr6_56399923_A_C | chr6:56399923 | -1.000 | -1.000 | -0.735 | — |
| chr6_56399927_A_C | chr6:56399927 | -1.000 | -1.000 | -0.800 | — |
| chr6_56399748_C_G | chr6:56399748 | 1.000 | 1.000 | 0.965 | — |
| chr6_56399846_T_A | chr6:56399846 | -1.000 | -1.000 | -0.606 | — |
| chr6_56399920_G_C | chr6:56399920 | -1.000 | -1.000 | -0.794 | — |
| chr6_56399729_A_T | chr6:56399729 | -1.000 | -1.000 | -0.700 | — |
| chr6_56399767_T_C | chr6:56399767 | -1.000 | -1.000 | -0.329 | — |
| chr6_56399883_G_T | chr6:56399883 | -1.000 | -1.000 | -0.776 | — |
| chr6_56399718_T_C | chr6:56399718 | -1.000 | -1.000 | -0.565 | — |
| chr6_56399816_T_G | chr6:56399816 | -1.000 | -1.000 | -1.000 | — |
| chr6_56399921_T_C | chr6:56399921 | -1.000 | -1.000 | -0.641 | — |
| chr6_56399730_T_A | chr6:56399730 | -1.000 | -1.000 | -0.571 | — |
| chr6_56399767_T_A | chr6:56399767 | -1.000 | -1.000 | -0.406 | — |
| chr6_56399883_G_C | chr6:56399883 | -1.000 | -1.000 | -0.724 | — |
| chr6_56399766_T_G | chr6:56399766 | -1.000 | -1.000 | -0.106 | — |
| chr6_56399728_A_G | chr6:56399728 | -1.000 | -1.000 | -0.647 | — |
| chr6_56399714_T_C | chr6:56399714 | -1.000 | -0.959 | -0.706 | — |
| chr6_56399731_A_C | chr6:56399731 | -1.000 | -1.000 | -0.688 | — |
| chr6_56399888_T_A | chr6:56399888 | -1.000 | -1.000 | -0.682 | — |
| chr6_56399932_C_A | chr6:56399932 | -1.000 | -1.000 | -0.729 | — |
| chr6_56399765_G_T | chr6:56399765 | -1.000 | -1.000 | -0.424 | — |
| chr6_56399727_A_G | chr6:56399727 | -1.000 | -1.000 | -0.500 | — |
| chr6_56399706_T_A | chr6:56399706 | 1.000 | 1.000 | 0.535 | — |
| chr6_56399727_A_T | chr6:56399727 | -1.000 | -0.980 | -0.512 | — |
| chr6_56399883_G_A | chr6:56399883 | -1.000 | -1.000 | -0.676 | — |
| chr6_56399923_A_T | chr6:56399923 | -1.000 | -1.000 | -0.576 | — |
| chr6_56399852_C_A | chr6:56399852 | 1.000 | 1.000 | 0.529 | — |
| chr6_56399925_T_C | chr6:56399925 | -1.000 | -1.000 | -0.882 | — |
| chr6_56399720_A_G | chr6:56399720 | -1.000 | -1.000 | -0.635 | — |
| chr6_56399793_T_A | chr6:56399793 | -1.000 | -1.000 | -0.476 | — |
| chr6_56399893_C_T | chr6:56399893 | -1.000 | -1.000 | -0.553 | — |
| chr6_56399729_A_C | chr6:56399729 | -1.000 | -1.000 | -0.465 | — |
| chr6_56399893_C_A | chr6:56399893 | -1.000 | -1.000 | -0.529 | — |
| chr6_56399928_T_C | chr6:56399928 | -1.000 | -1.000 | -0.565 | — |
| chr6_56399768_T_A | chr6:56399768 | -1.000 | -1.000 | -0.271 | — |
| chr6_56399730_T_G | chr6:56399730 | -1.000 | -0.919 | -0.576 | — |
| chr6_56399769_A_C | chr6:56399769 | -1.000 | -1.000 | -0.241 | — |
| chr6_56399927_A_G | chr6:56399927 | -1.000 | -1.000 | -0.576 | 0.0033% |
| chr6_56399787_A_T | chr6:56399787 | -1.000 | -1.000 | -0.406 | — |
| chr6_56399726_T_G | chr6:56399726 | -1.000 | -0.954 | -0.300 | — |
| chr6_56399719_C_G | chr6:56399719 | -1.000 | -0.848 | -0.571 | — |
| chr6_56399726_T_A | chr6:56399726 | -1.000 | -0.888 | -0.329 | — |
| chr6_56399768_T_C | chr6:56399768 | -1.000 | -1.000 | -0.153 | — |
| chr6_56399745_A_G | chr6:56399745 | -1.000 | -0.838 | -0.388 | — |
| chr6_56399706_T_C | chr6:56399706 | 1.000 | 0.878 | 0.612 | — |
| chr6_56399717_G_T | chr6:56399717 | -1.000 | -0.797 | -0.535 | — |
| chr6_56399766_T_A | chr6:56399766 | -1.000 | -1.000 | -0.159 | — |
| chr6_56399886_C_T | chr6:56399886 | -1.000 | -1.000 | -0.347 | <0.001% |
| chr6_56399712_A_T | chr6:56399712 | -1.000 | -0.746 | -0.612 | — |
| chr6_56399729_A_G | chr6:56399729 | -1.000 | -1.000 | -0.394 | — |
| chr6_56399829_A_G | chr6:56399829 | -1.000 | -0.990 | -0.729 | — |
| chr6_56399920_G_T | chr6:56399920 | -1.000 | -1.000 | -0.512 | — |
| chr6_56399929_T_A | chr6:56399929 | -1.000 | -0.929 | -0.647 | — |
| chr6_56399882_T_G | chr6:56399882 | -1.000 | -0.934 | -0.359 | — |
| chr6_56399888_T_G | chr6:56399888 | -1.000 | -1.000 | -0.559 | — |
| chr6_56399846_T_G | chr6:56399846 | -1.000 | -0.792 | -0.335 | — |
| chr6_56399890_A_T | chr6:56399890 | -1.000 | -1.000 | -0.441 | — |
| chr6_56399921_T_G | chr6:56399921 | -1.000 | -0.995 | -0.524 | — |
| chr6_56399728_A_C | chr6:56399728 | -1.000 | -0.985 | -0.518 | — |
| chr6_56399829_A_T | chr6:56399829 | -1.000 | -0.944 | -0.476 | — |
| chr6_56399704_C_G | chr6:56399704 | 1.000 | 0.807 | 0.594 | — |
| chr6_56399891_A_T | chr6:56399891 | -1.000 | -1.000 | -0.576 | — |
| chr6_56399885_A_G | chr6:56399885 | -1.000 | -1.000 | -0.500 | — |
| chr6_56399716_T_C | chr6:56399716 | 1.000 | 0.523 | 0.665 | — |
| chr6_56399714_T_A | chr6:56399714 | -1.000 | -0.685 | -0.482 | — |
| chr6_56399892_T_G | chr6:56399892 | -1.000 | -1.000 | -0.647 | — |
| chr6_56399624_A_T | chr6:56399624 | 1.000 | 0.853 | 0.459 | — |
| chr6_56399794_G_T | chr6:56399794 | -1.000 | -1.000 | -0.376 | — |
| chr6_56399847_G_C | chr6:56399847 | -1.000 | -0.921 | -0.524 | — |
| chr6_56399929_T_C | chr6:56399929 | -1.000 | -0.855 | -0.600 | 40.9% |
| chr6_56399788_A_T | chr6:56399788 | -1.000 | -1.000 | -0.465 | — |
| chr6_56399790_C_A | chr6:56399790 | -1.000 | -1.000 | -0.282 | — |
| chr6_56399924_A_G | chr6:56399924 | -1.000 | -1.000 | -0.582 | 0.0039% |
| chr6_56399790_C_T | chr6:56399790 | -1.000 | -1.000 | -0.212 | — |
| chr6_56399720_A_C | chr6:56399720 | -1.000 | -0.711 | -0.529 | — |
| chr6_56399769_A_T | chr6:56399769 | -1.000 | -0.888 | -0.171 | — |
| chr6_56399889_T_C | chr6:56399889 | -1.000 | -0.896 | -0.700 | <0.001% |
| chr6_56399731_A_T | chr6:56399731 | -1.000 | -0.777 | -0.418 | — |
| chr6_56399701_T_G | chr6:56399701 | 1.000 | 1.000 | 0.288 | — |
| chr6_56399808_T_A | chr6:56399808 | -1.000 | -0.898 | -0.329 | — |
| chr6_56399792_T_G | chr6:56399792 | -1.000 | -1.000 | -0.229 | — |
| chr6_56399893_C_G | chr6:56399893 | -1.000 | -1.000 | -0.288 | — |
| chr6_56399731_A_G | chr6:56399731 | -1.000 | -0.792 | -0.371 | — |
| chr6_56399789_C_G | chr6:56399789 | -1.000 | -1.000 | -0.365 | — |
| chr6_56399808_T_C | chr6:56399808 | -1.000 | -0.579 | -0.124 | — |
| chr6_56399764_T_G | chr6:56399764 | -1.000 | -0.863 | -0.188 | — |
| chr6_56399923_A_G | chr6:56399923 | -1.000 | -0.893 | -0.365 | — |
| chr6_56399791_T_A | chr6:56399791 | -1.000 | -1.000 | -0.253 | — |
| chr6_56399888_T_C | chr6:56399888 | -1.000 | -1.000 | -0.524 | — |
| chr6_56399887_T_A | chr6:56399887 | -1.000 | -0.888 | -0.312 | 0.0026% |
| chr6_56399718_T_A | chr6:56399718 | -1.000 | -0.635 | -0.376 | — |
| chr6_56399882_T_A | chr6:56399882 | -1.000 | -1.000 | -0.406 | — |
| chr6_56399703_C_T | chr6:56399703 | 1.000 | 0.264 | 0.200 | — |
| chr6_56399722_A_G | chr6:56399722 | -1.000 | -0.645 | -0.412 | — |
| chr6_56399599_G_T | chr6:56399599 | 1.000 | 0.904 | 0.224 | — |
| chr6_56399931_A_G | chr6:56399931 | -1.000 | -0.683 | -0.571 | — |
| chr6_56399700_T_A | chr6:56399700 | 1.000 | 0.538 | 0.365 | — |
| chr6_56399793_T_G | chr6:56399793 | -1.000 | -1.000 | -0.306 | — |
| chr6_56399851_C_T | chr6:56399851 | 1.000 | 0.731 | 0.359 | 0.0020% |
| chr6_56399750_T_G | chr6:56399750 | 1.000 | 0.731 | 0.235 | — |
| chr6_56399793_T_C | chr6:56399793 | -1.000 | -0.995 | -0.188 | — |
| chr6_56399721_T_A | chr6:56399721 | -1.000 | -0.411 | -0.506 | — |
| chr6_56399857_G_T | chr6:56399857 | -1.000 | -0.533 | -0.259 | <0.001% |
| chr6_56399786_T_A | chr6:56399786 | -1.000 | -1.000 | -0.265 | — |
| chr6_56399713_T_G | chr6:56399713 | -1.000 | -0.518 | -0.412 | — |
| chr6_56399735_G_T | chr6:56399735 | -1.000 | -0.645 | -0.400 | — |
| chr6_56399924_A_T | chr6:56399924 | -1.000 | -0.896 | -0.388 | — |
| chr6_56399766_T_C | chr6:56399766 | -0.998 | -0.609 | 0.059 | — |
| chr6_56399859_T_G | chr6:56399859 | -0.998 | -0.563 | -0.359 | — |
| chr6_56399928_T_A | chr6:56399928 | -0.998 | -0.871 | -0.329 | — |
| chr6_56399739_T_C | chr6:56399739 | -0.992 | -0.523 | -0.200 | — |
| chr6_56399791_T_G | chr6:56399791 | -0.982 | -1.000 | -0.259 | — |
| chr6_56399794_G_A | chr6:56399794 | -0.982 | -0.868 | -0.353 | — |
| chr6_56399847_G_A | chr6:56399847 | -0.975 | -0.624 | -0.394 | — |
| chr6_56399736_A_G | chr6:56399736 | -0.972 | -0.442 | -0.159 | — |
| chr6_56399804_G_C | chr6:56399804 | -0.972 | -0.609 | -0.135 | — |
| chr6_56399886_C_A | chr6:56399886 | -0.972 | -1.000 | -0.229 | — |
| chr6_56399713_T_A | chr6:56399713 | -0.965 | -0.487 | -0.482 | — |
| chr6_56399875_C_G | chr6:56399875 | -0.952 | -0.574 | -0.394 | — |
| chr6_56399922_T_A | chr6:56399922 | -0.948 | -0.759 | -0.365 | — |
| chr6_56399922_T_G | chr6:56399922 | -0.948 | -0.871 | -0.306 | — |
| chr6_56399931_A_C | chr6:56399931 | -0.938 | -0.711 | -0.576 | — |
| chr6_56399797_C_G | chr6:56399797 | -0.935 | -0.868 | -0.259 | <0.001% |
| chr6_56399820_G_C | chr6:56399820 | -0.935 | -0.335 | 0.100 | — |
| chr6_56399737_G_C | chr6:56399737 | -0.932 | -0.421 | -0.124 | — |
| chr6_56399867_T_A | chr6:56399867 | -0.928 | -0.797 | -0.418 | — |
| chr6_56399790_C_G | chr6:56399790 | -0.925 | -1.000 | -0.182 | <0.001% |
| chr6_56399794_G_C | chr6:56399794 | -0.922 | -0.843 | -0.176 | — |
| chr6_56399739_T_A | chr6:56399739 | -0.918 | -0.406 | -0.094 | — |
| chr6_56399828_G_C | chr6:56399828 | 0.918 | 0.320 | 0.406 | — |
| chr6_56399737_G_T | chr6:56399737 | -0.912 | -0.447 | -0.200 | — |
| chr6_56399725_G_C | chr6:56399725 | -0.905 | -0.645 | -0.312 | — |
| chr6_56399742_C_T | chr6:56399742 | -0.905 | -0.584 | -0.235 | — |
| chr6_56399770_C_G | chr6:56399770 | -0.905 | -0.614 | -0.124 | — |
| chr6_56399792_T_A | chr6:56399792 | -0.905 | -1.000 | -0.124 | — |
| chr6_56399708_G_T | chr6:56399708 | -0.899 | -0.624 | -0.353 | — |
| chr6_56399885_A_T | chr6:56399885 | -0.899 | -0.807 | -0.324 | — |
| chr6_56399857_G_A | chr6:56399857 | -0.895 | -0.401 | -0.224 | — |
| chr6_56399928_T_G | chr6:56399928 | -0.892 | -0.713 | -0.235 | — |
| chr6_56399715_A_C | chr6:56399715 | -0.885 | -0.437 | -0.341 | — |
| chr6_56399717_G_A | chr6:56399717 | -0.872 | -0.467 | -0.400 | — |
| chr6_56399723_G_T | chr6:56399723 | -0.865 | -0.756 | -0.329 | — |
| chr6_56399839_G_C | chr6:56399839 | -0.855 | -0.426 | -0.224 | — |
| chr6_56399737_G_A | chr6:56399737 | -0.845 | -0.330 | -0.112 | — |
| chr6_56399853_T_C | chr6:56399853 | -0.845 | -0.320 | -0.194 | — |
| chr6_56399687_A_C | chr6:56399687 | 0.839 | 0.609 | 0.447 | — |
| chr6_56399822_G_A | chr6:56399822 | 0.835 | 0.376 | 0.465 | — |
| chr6_56399858_G_C | chr6:56399858 | -0.835 | -0.355 | -0.206 | — |
| chr6_56399770_C_A | chr6:56399770 | -0.819 | -0.579 | -0.153 | — |
| chr6_56399796_G_C | chr6:56399796 | 0.815 | 0.868 | 0.241 | — |
| chr6_56399931_A_T | chr6:56399931 | -0.815 | -0.563 | -0.500 | — |
| chr6_56399882_T_C | chr6:56399882 | -0.809 | -0.746 | -0.224 | 0.0059% |
| chr6_56399800_G_T | chr6:56399800 | -0.802 | -0.614 | -0.282 | — |
| chr6_56399764_T_A | chr6:56399764 | -0.799 | -0.472 | -0.129 | — |
| chr6_56399887_T_C | chr6:56399887 | -0.799 | -0.744 | -0.294 | — |
| chr6_56399724_G_C | chr6:56399724 | -0.785 | -0.635 | -0.300 | — |
| chr6_56399813_G_C | chr6:56399813 | 0.785 | 0.513 | 0.453 | — |
| chr6_56399847_G_T | chr6:56399847 | -0.782 | -0.503 | -0.353 | — |
| chr6_56399704_C_A | chr6:56399704 | 0.779 | 0.609 | 0.200 | — |
| chr6_56399715_A_T | chr6:56399715 | -0.772 | -0.259 | -0.253 | — |
| chr6_56399781_T_G | chr6:56399781 | 0.765 | 0.604 | 0.229 | — |
| chr6_56399843_T_C | chr6:56399843 | 0.765 | 0.670 | 0.259 | 0.0013% |
| chr6_56399857_G_C | chr6:56399857 | -0.762 | -0.330 | -0.112 | — |
| chr6_56399787_A_C | chr6:56399787 | -0.755 | -0.716 | -0.047 | — |
| chr6_56399842_A_G | chr6:56399842 | -0.749 | -0.335 | -0.418 | — |
| chr6_56399862_T_A | chr6:56399862 | -0.749 | -0.711 | -0.276 | — |
| chr6_56399814_G_C | chr6:56399814 | 0.745 | 0.457 | 0.541 | — |
| chr6_56399721_T_G | chr6:56399721 | -0.739 | -0.345 | -0.335 | — |
| chr6_56399884_A_T | chr6:56399884 | -0.739 | -0.736 | -0.235 | — |
| chr6_56399712_A_C | chr6:56399712 | -0.732 | -0.365 | -0.341 | — |
| chr6_56399780_A_G | chr6:56399780 | 0.729 | 0.497 | 0.188 | — |
| chr6_56399716_T_A | chr6:56399716 | -0.725 | -0.391 | -0.329 | — |
| chr6_56399791_T_C | chr6:56399791 | -0.725 | -0.807 | -0.088 | — |
| chr6_56399813_G_T | chr6:56399813 | 0.725 | 0.401 | 0.282 | — |
| chr6_56399858_G_A | chr6:56399858 | -0.722 | -0.274 | -0.159 | — |
| chr6_56399714_T_G | chr6:56399714 | 0.719 | 0.234 | 0.471 | — |
| chr6_56399798_C_A | chr6:56399798 | -0.719 | -0.640 | -0.288 | — |
| chr6_56399914_A_T | chr6:56399914 | -0.712 | -0.589 | -0.335 | — |
| chr6_56399797_C_A | chr6:56399797 | -0.702 | -0.533 | -0.288 | — |
| chr6_56399817_G_T | chr6:56399817 | 0.702 | 0.604 | 0.365 | — |
| chr6_56399828_G_T | chr6:56399828 | 0.702 | 0.294 | 0.241 | — |
| chr6_56399753_C_T | chr6:56399753 | -0.699 | -0.599 | -0.165 | — |
| chr6_56399772_C_A | chr6:56399772 | -0.696 | -0.431 | -0.135 | — |
| chr6_56399861_T_C | chr6:56399861 | -0.696 | -0.629 | -0.194 | 0.0066% |
| chr6_56399679_C_G | chr6:56399679 | -0.692 | -0.609 | -0.259 | — |
| chr6_56399690_C_T | chr6:56399690 | -0.692 | -0.487 | -0.359 | — |
| chr6_56399780_A_C | chr6:56399780 | 0.692 | 0.492 | 0.182 | — |
| chr6_56399858_G_T | chr6:56399858 | -0.692 | -0.284 | -0.153 | — |
| chr6_56399814_G_T | chr6:56399814 | 0.682 | 0.401 | 0.365 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.