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CTSH
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near CTSH
chr15:78,821,059..79,045,098, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr15_78913225_A_C | chr15:78913225 | 23,936 | 11,584 | 31,424 | — |
| chr15_78913241_C_A | chr15:78913241 | 19,360 | 9,824 | 20,992 | — |
| chr15_78913128_A_T | chr15:78913128 | 14,464 | 6,528 | 16,384 | — |
| chr15_78913191_T_G | chr15:78913191 | 12,864 | 6,080 | 15,488 | — |
| chr15_78913182_A_T | chr15:78913182 | -11,552 | -5,152 | -13,312 | — |
| chr15_78913185_G_C | chr15:78913185 | -11,392 | -4,992 | -12,800 | 6.6e-6 |
| chr15_78913185_G_A | chr15:78913185 | -11,360 | -5,056 | -14,080 | — |
| chr15_78913182_A_C | chr15:78913182 | -11,168 | -5,120 | -12,800 | — |
| chr15_78913184_T_G | chr15:78913184 | -10,912 | -4,672 | -12,928 | — |
| chr15_78913184_T_A | chr15:78913184 | -10,720 | -4,704 | -13,696 | — |
| chr15_78913199_G_T | chr15:78913199 | 10,656 | 4,992 | 12,416 | — |
| chr15_78913186_A_C | chr15:78913186 | -10,400 | -3,040 | -12,672 | — |
| chr15_78913141_T_A | chr15:78913141 | 10,112 | 5,824 | 11,904 | — |
| chr15_78913231_A_C | chr15:78913231 | 10,080 | 6,176 | 15,040 | — |
| chr15_78944910_T_G | chr15:78944910 | 9,856 | 2,496 | 2,560 | — |
| chr15_78913206_A_G | chr15:78913206 | 9,792 | 4,608 | 11,392 | — |
| chr15_78913186_A_T | chr15:78913186 | -9,728 | -3,648 | -12,032 | — |
| chr15_78913136_T_G | chr15:78913136 | 9,696 | 5,728 | 12,800 | — |
| chr15_78913186_A_G | chr15:78913186 | -9,536 | -3,424 | -11,648 | — |
| chr15_78913240_A_T | chr15:78913240 | 9,440 | 4,544 | 9,728 | — |
| chr15_78913185_G_T | chr15:78913185 | -9,280 | -4,000 | -11,136 | — |
| chr15_78913172_G_C | chr15:78913172 | 9,024 | 4,640 | 9,472 | — |
| chr15_78913230_A_G | chr15:78913230 | 8,800 | 4,032 | 12,288 | — |
| chr15_78913222_G_C | chr15:78913222 | -8,576 | -4,608 | -12,160 | — |
| chr15_78913222_G_T | chr15:78913222 | -8,480 | -4,576 | -12,672 | — |
| chr15_78913126_A_C | chr15:78913126 | 8,288 | 3,424 | 8,960 | — |
| chr15_78913222_G_A | chr15:78913222 | -8,192 | -4,384 | -12,672 | 5.9e-5 |
| chr15_78944907_C_A | chr15:78944907 | -8,192 | 288 | -2,304 | — |
| chr15_78913164_A_T | chr15:78913164 | 7,808 | 4,352 | 8,832 | — |
| chr15_78913221_T_G | chr15:78913221 | -7,744 | -4,224 | -9,344 | — |
| chr15_78913182_A_G | chr15:78913182 | -7,328 | -3,296 | -6,784 | 6.6e-6 |
| chr15_78913189_T_C | chr15:78913189 | -7,296 | -3,072 | -8,960 | — |
| chr15_78913181_T_G | chr15:78913181 | -7,232 | -3,392 | -7,168 | — |
| chr15_78913181_T_A | chr15:78913181 | -7,136 | -3,264 | -7,808 | — |
| chr15_78913184_T_C | chr15:78913184 | -6,912 | -3,296 | -6,656 | — |
| chr15_78913224_A_G | chr15:78913224 | -6,784 | -3,680 | -9,216 | — |
| chr15_78913210_A_C | chr15:78913210 | 6,464 | 3,168 | 7,552 | — |
| chr15_78913237_G_T | chr15:78913237 | 6,368 | 3,520 | 6,016 | — |
| chr15_78913224_A_C | chr15:78913224 | -6,144 | -3,328 | -7,936 | — |
| chr15_78944937_C_A | chr15:78944937 | -6,144 | -384 | -2,048 | — |
| chr15_78913214_G_A | chr15:78913214 | 6,048 | 3,520 | 7,424 | — |
| chr15_78913224_A_T | chr15:78913224 | -6,016 | -3,456 | -9,664 | — |
| chr15_78913189_T_A | chr15:78913189 | -6,016 | -2,944 | -8,448 | — |
| chr15_78944906_A_G | chr15:78944906 | 6,016 | 832 | 1,536 | — |
| chr15_78913188_T_A | chr15:78913188 | -5,952 | -1,632 | -8,448 | — |
| chr15_78913190_T_G | chr15:78913190 | -5,952 | -2,720 | -6,784 | — |
| chr15_78913187_T_A | chr15:78913187 | -5,920 | -2,528 | -7,744 | — |
| chr15_78913190_T_C | chr15:78913190 | -5,920 | -2,848 | -6,912 | — |
| chr15_78913187_T_G | chr15:78913187 | -5,856 | -2,496 | -7,296 | — |
| chr15_78913239_A_G | chr15:78913239 | 5,824 | 3,104 | 8,064 | — |
| chr15_78913226_T_A | chr15:78913226 | -5,760 | -3,296 | -8,448 | — |
| chr15_78913183_T_G | chr15:78913183 | -5,664 | -2,624 | -6,016 | — |
| chr15_78913226_T_C | chr15:78913226 | -5,600 | -3,232 | -7,936 | — |
| chr15_78913166_A_C | chr15:78913166 | -5,600 | -2,944 | -7,808 | — |
| chr15_78913221_T_A | chr15:78913221 | -5,568 | -3,008 | -7,680 | — |
| chr15_78913183_T_A | chr15:78913183 | -5,568 | -2,528 | -6,976 | — |
| chr15_78913181_T_C | chr15:78913181 | -5,568 | -2,784 | -5,120 | — |
| chr15_78913183_T_C | chr15:78913183 | -5,536 | -2,592 | -6,144 | 6.6e-6 |
| chr15_78913189_T_G | chr15:78913189 | -5,472 | -2,368 | -6,400 | — |
| chr15_78913206_A_C | chr15:78913206 | 5,376 | 2,112 | 6,784 | — |
| chr15_78944934_T_C | chr15:78944934 | -5,248 | -160 | -2,048 | — |
| chr15_78913226_T_G | chr15:78913226 | -5,152 | -3,168 | -6,912 | — |
| chr15_78913173_T_C | chr15:78913173 | 5,120 | 2,848 | 6,400 | 6.6e-6 |
| chr15_78944907_C_G | chr15:78944907 | -4,992 | -96 | -5,376 | — |
| chr15_78944915_C_G | chr15:78944915 | -4,992 | -320 | 512 | — |
| chr15_78913232_C_G | chr15:78913232 | -4,960 | -3,168 | -6,528 | — |
| chr15_78913199_G_C | chr15:78913199 | 4,832 | 2,432 | 6,656 | — |
| chr15_78913232_C_T | chr15:78913232 | -4,736 | -3,072 | -7,680 | 6.6e-6 |
| chr15_78913221_T_C | chr15:78913221 | -4,736 | -2,688 | -5,632 | — |
| chr15_78944909_G_C | chr15:78944909 | -4,736 | -480 | -1,792 | — |
| chr15_78913213_G_C | chr15:78913213 | 4,512 | 1,472 | 5,888 | — |
| chr15_78913205_A_T | chr15:78913205 | -4,480 | -2,784 | -6,656 | — |
| chr15_78913198_G_A | chr15:78913198 | 4,448 | 2,304 | 4,864 | 3.9e-5 |
| chr15_78913190_T_A | chr15:78913190 | -4,384 | -832 | -4,992 | — |
| chr15_78913228_T_C | chr15:78913228 | -4,320 | -2,432 | -5,504 | — |
| chr15_78913174_A_C | chr15:78913174 | 4,224 | 2,048 | 5,248 | — |
| chr15_78944917_G_T | chr15:78944917 | 4,224 | 1,472 | 4,864 | — |
| chr15_78913236_G_T | chr15:78913236 | 4,224 | 2,304 | 4,480 | — |
| chr15_78913228_T_A | chr15:78913228 | -4,192 | -2,528 | -6,656 | — |
| chr15_78913235_A_T | chr15:78913235 | 4,192 | 1,952 | 5,504 | — |
| chr15_78913177_T_C | chr15:78913177 | 4,128 | 1,760 | 4,992 | — |
| chr15_78913233_C_A | chr15:78913233 | -4,096 | -2,400 | -6,528 | — |
| chr15_78913233_C_G | chr15:78913233 | -4,032 | -2,464 | -5,120 | — |
| chr15_78913228_T_G | chr15:78913228 | -3,968 | -2,560 | -5,248 | — |
| chr15_78913236_G_A | chr15:78913236 | 3,968 | 2,336 | 3,840 | — |
| chr15_78944918_C_G | chr15:78944918 | -3,968 | -640 | -1,792 | — |
| chr15_78944913_G_A | chr15:78944913 | 3,712 | 896 | 1,280 | — |
| chr15_78944932_A_C | chr15:78944932 | -3,712 | -896 | 1,792 | — |
| chr15_78913188_T_G | chr15:78913188 | -3,680 | -128 | -3,456 | — |
| chr15_78913125_T_C | chr15:78913125 | 3,648 | 1,376 | 4,352 | — |
| chr15_78913165_C_T | chr15:78913165 | -3,584 | -1,824 | -5,504 | — |
| chr15_78913223_G_C | chr15:78913223 | -3,584 | -2,208 | -5,248 | — |
| chr15_78913201_G_T | chr15:78913201 | -3,520 | -1,248 | -4,864 | — |
| chr15_78913165_C_A | chr15:78913165 | -3,488 | -1,184 | -4,992 | — |
| chr15_78944912_C_A | chr15:78944912 | -3,456 | -256 | -2,560 | — |
| chr15_78944923_C_A | chr15:78944923 | -3,456 | -64 | -1,280 | 6.6e-6 |
| chr15_78913201_G_A | chr15:78913201 | -3,392 | -640 | -3,584 | — |
| chr15_78913225_A_T | chr15:78913225 | -3,360 | -1,952 | -4,416 | — |
| chr15_78913232_C_A | chr15:78913232 | -3,328 | -2,400 | -4,224 | — |
| chr15_78944937_C_G | chr15:78944937 | -3,328 | -384 | 0 | — |
| chr15_78913165_C_G | chr15:78913165 | -3,296 | -1,536 | -5,248 | — |
| chr15_78913237_G_C | chr15:78913237 | 3,232 | 1,184 | 3,968 | — |
| chr15_78913153_A_G | chr15:78913153 | 3,200 | 1,344 | 3,968 | — |
| chr15_78913180_T_A | chr15:78913180 | -3,200 | -1,504 | -3,712 | — |
| chr15_78913241_C_T | chr15:78913241 | 3,200 | 2,336 | 3,072 | — |
| chr15_78944917_G_A | chr15:78944917 | 3,200 | 736 | 1,024 | — |
| chr15_78913152_A_C | chr15:78913152 | -3,168 | -1,632 | -4,608 | — |
| chr15_78913198_G_T | chr15:78913198 | 3,168 | 1,408 | 3,840 | — |
| chr15_78913134_A_T | chr15:78913134 | -3,136 | -1,632 | -4,992 | — |
| chr15_78913216_T_A | chr15:78913216 | 3,104 | 1,472 | 3,456 | — |
| chr15_78913240_A_C | chr15:78913240 | 3,104 | 1,920 | 3,072 | — |
| chr15_78944916_G_A | chr15:78944916 | 3,072 | 512 | -768 | 3.9e-5 |
| chr15_78913126_A_G | chr15:78913126 | 3,008 | 960 | 3,456 | — |
| chr15_78913176_G_C | chr15:78913176 | 2,976 | 1,248 | 3,200 | — |
| chr15_78913206_A_T | chr15:78913206 | -2,944 | -1,920 | -4,096 | — |
| chr15_78944933_C_A | chr15:78944933 | 2,944 | 224 | -3,328 | — |
| chr15_78944910_T_C | chr15:78944910 | 2,944 | 0 | 1,024 | — |
| chr15_78944915_C_A | chr15:78944915 | -2,944 | -320 | -2,304 | — |
| chr15_78944932_A_G | chr15:78944932 | -2,944 | -288 | -256 | — |
| chr15_78913200_T_G | chr15:78913200 | -2,912 | -2,048 | -4,096 | — |
| chr15_78913174_A_T | chr15:78913174 | 2,912 | 1,280 | 3,456 | — |
| chr15_78913209_G_C | chr15:78913209 | 2,880 | 1,344 | 2,176 | — |
| chr15_78913223_G_A | chr15:78913223 | -2,848 | -1,632 | -4,608 | — |
| chr15_78913213_G_A | chr15:78913213 | 2,848 | 1,248 | 2,688 | — |
| chr15_78913213_G_T | chr15:78913213 | 2,816 | 2,016 | 3,200 | — |
| chr15_78944936_C_T | chr15:78944936 | -2,816 | -256 | 1,536 | — |
| chr15_78913171_A_C | chr15:78913171 | 2,752 | 1,504 | 4,608 | — |
| chr15_78913239_A_T | chr15:78913239 | 2,752 | 1,376 | 3,200 | — |
| chr15_78913200_T_A | chr15:78913200 | 2,752 | 1,216 | 3,072 | — |
| chr15_78913156_C_T | chr15:78913156 | -2,720 | -1,152 | -4,352 | — |
| chr15_78944914_G_A | chr15:78944914 | 2,688 | 480 | -8,704 | — |
| chr15_78944924_A_T | chr15:78944924 | 2,688 | 576 | 4,096 | — |
| chr15_78944928_G_T | chr15:78944928 | 2,688 | 128 | 4,096 | — |
| chr15_78913170_G_C | chr15:78913170 | 2,688 | 1,536 | 3,712 | — |
| chr15_78944911_T_A | chr15:78944911 | 2,688 | 160 | 2,944 | — |
| chr15_78944931_G_A | chr15:78944931 | 2,688 | 192 | 512 | — |
| chr15_78913156_C_G | chr15:78913156 | 2,656 | 1,248 | 2,688 | — |
| chr15_78913162_G_A | chr15:78913162 | -2,624 | -1,152 | -4,096 | — |
| chr15_78913116_T_A | chr15:78913116 | 2,592 | 2,112 | 4,608 | — |
| chr15_78913223_G_T | chr15:78913223 | -2,592 | -1,536 | -3,840 | — |
| chr15_78913154_T_C | chr15:78913154 | 2,592 | 1,120 | 3,712 | — |
| chr15_78913148_G_T | chr15:78913148 | -2,560 | -1,184 | -4,224 | — |
| chr15_78913229_G_T | chr15:78913229 | -2,560 | -2,016 | -4,096 | — |
| chr15_78944922_G_A | chr15:78944922 | 2,560 | 704 | 1,280 | — |
| chr15_78913212_T_A | chr15:78913212 | 2,528 | 1,344 | 3,200 | — |
| chr15_78913192_G_C | chr15:78913192 | 2,528 | 1,056 | 2,944 | — |
| chr15_78913142_A_C | chr15:78913142 | -2,528 | -1,472 | -2,560 | — |
| chr15_78913215_C_A | chr15:78913215 | -2,496 | -1,472 | -4,928 | — |
| chr15_78913196_A_G | chr15:78913196 | 2,496 | 1,024 | 3,840 | — |
| chr15_78913188_T_C | chr15:78913188 | -2,496 | -192 | -2,944 | — |
| chr15_78913161_A_C | chr15:78913161 | -2,496 | -1,248 | -2,688 | — |
| chr15_78913219_G_A | chr15:78913219 | 2,464 | 1,504 | 2,944 | — |
| chr15_78913210_A_T | chr15:78913210 | -2,432 | -1,024 | -3,840 | — |
| chr15_78913229_G_A | chr15:78913229 | -2,432 | -1,920 | -3,840 | — |
| chr15_78913229_G_C | chr15:78913229 | -2,432 | -1,888 | -3,712 | — |
| chr15_78913124_A_C | chr15:78913124 | 2,432 | 896 | 3,200 | — |
| chr15_78913234_C_A | chr15:78913234 | -2,368 | -1,440 | -3,072 | — |
| chr15_78913207_G_T | chr15:78913207 | -2,336 | -1,472 | -4,224 | — |
| chr15_78913125_T_G | chr15:78913125 | 2,336 | 736 | 3,072 | — |
| chr15_78913148_G_C | chr15:78913148 | -2,304 | -1,120 | -3,200 | — |
| chr15_78913139_C_T | chr15:78913139 | -2,272 | -1,312 | -4,224 | — |
| chr15_78913143_G_A | chr15:78913143 | -2,272 | -1,280 | -3,648 | — |
| chr15_78913130_G_A | chr15:78913130 | -2,240 | -1,088 | -3,712 | — |
| chr15_78944919_A_C | chr15:78944919 | -2,176 | -544 | -2,816 | — |
| chr15_78913154_T_G | chr15:78913154 | -2,176 | -1,280 | -2,560 | — |
| chr15_78913162_G_C | chr15:78913162 | -2,176 | -864 | -2,560 | — |
| chr15_78913121_G_T | chr15:78913121 | -2,144 | -1,344 | -2,688 | — |
| chr15_78913215_C_G | chr15:78913215 | -2,112 | -1,120 | -3,456 | — |
| chr15_78913125_T_A | chr15:78913125 | 2,080 | 704 | 2,560 | — |
| chr15_78913211_A_C | chr15:78913211 | 2,048 | 768 | 2,944 | — |
| chr15_78913241_C_G | chr15:78913241 | 2,016 | 1,056 | 3,200 | — |
| chr15_78913159_C_A | chr15:78913159 | -1,984 | -960 | -3,584 | — |
| chr15_78913217_G_A | chr15:78913217 | 1,952 | 1,184 | 2,560 | — |
| chr15_78944925_G_T | chr15:78944925 | 1,920 | 480 | 2,816 | — |
| chr15_78913231_A_T | chr15:78913231 | 1,856 | 608 | 3,008 | — |
| chr15_78913195_C_T | chr15:78913195 | -1,792 | -864 | -3,008 | — |
| chr15_78913136_T_C | chr15:78913136 | 1,792 | 576 | 2,816 | — |
| chr15_78913149_C_T | chr15:78913149 | -1,760 | -896 | -3,072 | — |
| chr15_78913208_T_G | chr15:78913208 | 1,760 | 864 | 2,944 | — |
| chr15_78913143_G_T | chr15:78913143 | -1,760 | -896 | -2,560 | — |
| chr15_78913133_A_C | chr15:78913133 | 1,696 | 832 | 2,560 | — |
| chr15_78913159_C_T | chr15:78913159 | -1,632 | -640 | -2,944 | — |
| chr15_78913193_C_A | chr15:78913193 | -1,600 | -1,120 | -2,944 | — |
| chr15_78944935_C_G | chr15:78944935 | 1,536 | 384 | 5,888 | — |
| chr15_78913215_C_T | chr15:78913215 | -1,408 | -800 | -3,200 | — |
| chr15_78913227_T_A | chr15:78913227 | -1,408 | -1,376 | -2,880 | — |
| chr15_78913139_C_A | chr15:78913139 | -1,280 | -960 | -3,200 | — |
| chr15_78944920_C_T | chr15:78944920 | -1,280 | 256 | -2,560 | — |
| chr15_78944911_T_G | chr15:78944911 | 1,152 | -480 | 2,944 | — |
| chr15_78944928_G_A | chr15:78944928 | 896 | -224 | 4,864 | — |
| chr15_78944919_A_G | chr15:78944919 | 768 | -160 | -3,584 | — |
| chr15_78928687_T_G | chr15:78928687 | -592 | -144 | -2,688 | — |
| chr15_78928720_A_G | chr15:78928720 | -432 | 0 | -2,944 | — |
| chr15_78944938_A_C | chr15:78944938 | -384 | -128 | -2,816 | — |
| chr15_78928809_T_C | chr15:78928809 | 352 | 0 | 2,816 | — |
| chr15_78928685_C_G | chr15:78928685 | -248 | -176 | -2,944 | — |
| chr15_78928803_T_G | chr15:78928803 | -224 | -368 | -3,584 | — |
| chr15_78928718_G_C | chr15:78928718 | 216 | 0 | 2,560 | — |
| chr15_78928806_T_G | chr15:78928806 | -128 | -400 | -4,736 | — |
| chr15_78928796_A_G | chr15:78928796 | 0 | -288 | -2,560 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.