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CTSH
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near CTSH
chr15:78,821,059..79,045,098, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr15_78913225_A_C | chr15:78913225 | 0.622 | 0.919 | 1.000 | — |
| chr15_78913241_C_A | chr15:78913241 | 0.503 | 0.779 | 0.965 | — |
| chr15_78913128_A_T | chr15:78913128 | 0.376 | 0.518 | 0.753 | — |
| chr15_78913191_T_G | chr15:78913191 | 0.334 | 0.482 | 0.712 | — |
| chr15_78913231_A_C | chr15:78913231 | 0.262 | 0.490 | 0.691 | — |
| chr15_78913185_G_A | chr15:78913185 | -0.295 | -0.401 | -0.647 | — |
| chr15_78913184_T_A | chr15:78913184 | -0.279 | -0.373 | -0.629 | — |
| chr15_78913182_A_T | chr15:78913182 | -0.300 | -0.409 | -0.612 | — |
| chr15_78913184_T_G | chr15:78913184 | -0.284 | -0.371 | -0.594 | — |
| chr15_78913136_T_G | chr15:78913136 | 0.252 | 0.454 | 0.588 | — |
| chr15_78913182_A_C | chr15:78913182 | -0.290 | -0.406 | -0.588 | — |
| chr15_78913185_G_C | chr15:78913185 | -0.296 | -0.396 | -0.588 | <0.001% |
| chr15_78913186_A_C | chr15:78913186 | -0.270 | -0.241 | -0.582 | — |
| chr15_78913222_G_A | chr15:78913222 | -0.213 | -0.348 | -0.582 | 0.0059% |
| chr15_78913222_G_T | chr15:78913222 | -0.220 | -0.363 | -0.582 | — |
| chr15_78913199_G_T | chr15:78913199 | 0.277 | 0.396 | 0.571 | — |
| chr15_78913230_A_G | chr15:78913230 | 0.229 | 0.320 | 0.565 | — |
| chr15_78913222_G_C | chr15:78913222 | -0.223 | -0.365 | -0.559 | — |
| chr15_78913186_A_T | chr15:78913186 | -0.253 | -0.289 | -0.553 | — |
| chr15_78913141_T_A | chr15:78913141 | 0.263 | 0.462 | 0.547 | — |
| chr15_78913186_A_G | chr15:78913186 | -0.248 | -0.272 | -0.535 | — |
| chr15_78913206_A_G | chr15:78913206 | 0.255 | 0.365 | 0.524 | — |
| chr15_78913185_G_T | chr15:78913185 | -0.241 | -0.317 | -0.512 | — |
| chr15_78944910_T_G | chr15:78944910 | 0.256 | 0.198 | 0.118 | — |
| chr15_78913240_A_T | chr15:78913240 | 0.245 | 0.360 | 0.447 | — |
| chr15_78913224_A_T | chr15:78913224 | -0.156 | -0.274 | -0.444 | — |
| chr15_78913172_G_C | chr15:78913172 | 0.235 | 0.368 | 0.435 | — |
| chr15_78913221_T_G | chr15:78913221 | -0.201 | -0.335 | -0.429 | — |
| chr15_78913224_A_G | chr15:78913224 | -0.176 | -0.292 | -0.424 | — |
| chr15_78913126_A_C | chr15:78913126 | 0.215 | 0.272 | 0.412 | — |
| chr15_78913189_T_C | chr15:78913189 | -0.190 | -0.244 | -0.412 | — |
| chr15_78913164_A_T | chr15:78913164 | 0.203 | 0.345 | 0.406 | — |
| chr15_78944914_G_A | chr15:78944914 | 0.070 | 0.038 | -0.400 | — |
| chr15_78913188_T_A | chr15:78913188 | -0.155 | -0.129 | -0.388 | — |
| chr15_78913189_T_A | chr15:78913189 | -0.156 | -0.234 | -0.388 | — |
| chr15_78913226_T_A | chr15:78913226 | -0.150 | -0.261 | -0.388 | — |
| chr15_78944907_C_A | chr15:78944907 | -0.213 | 0.023 | -0.106 | — |
| chr15_78913239_A_G | chr15:78913239 | 0.151 | 0.246 | 0.371 | — |
| chr15_78913224_A_C | chr15:78913224 | -0.160 | -0.264 | -0.365 | — |
| chr15_78913226_T_C | chr15:78913226 | -0.146 | -0.256 | -0.365 | — |
| chr15_78913166_A_C | chr15:78913166 | -0.146 | -0.234 | -0.359 | — |
| chr15_78913181_T_A | chr15:78913181 | -0.186 | -0.259 | -0.359 | — |
| chr15_78913187_T_A | chr15:78913187 | -0.154 | -0.201 | -0.356 | — |
| chr15_78913221_T_A | chr15:78913221 | -0.145 | -0.239 | -0.353 | — |
| chr15_78913232_C_T | chr15:78913232 | -0.123 | -0.244 | -0.353 | <0.001% |
| chr15_78913210_A_C | chr15:78913210 | 0.168 | 0.251 | 0.347 | — |
| chr15_78913214_G_A | chr15:78913214 | 0.157 | 0.279 | 0.341 | — |
| chr15_78913182_A_G | chr15:78913182 | -0.191 | -0.261 | -0.312 | <0.001% |
| chr15_78913187_T_G | chr15:78913187 | -0.152 | -0.198 | -0.335 | — |
| chr15_78913181_T_G | chr15:78913181 | -0.188 | -0.269 | -0.329 | — |
| chr15_78913183_T_A | chr15:78913183 | -0.145 | -0.201 | -0.321 | — |
| chr15_78913184_T_C | chr15:78913184 | -0.180 | -0.261 | -0.306 | — |
| chr15_78913190_T_C | chr15:78913190 | -0.154 | -0.226 | -0.318 | — |
| chr15_78913226_T_G | chr15:78913226 | -0.134 | -0.251 | -0.318 | — |
| chr15_78913190_T_G | chr15:78913190 | -0.155 | -0.216 | -0.312 | — |
| chr15_78913206_A_C | chr15:78913206 | 0.140 | 0.168 | 0.312 | — |
| chr15_78913199_G_C | chr15:78913199 | 0.126 | 0.193 | 0.306 | — |
| chr15_78913205_A_T | chr15:78913205 | -0.116 | -0.221 | -0.306 | — |
| chr15_78913228_T_A | chr15:78913228 | -0.109 | -0.201 | -0.306 | — |
| chr15_78913232_C_G | chr15:78913232 | -0.129 | -0.251 | -0.300 | — |
| chr15_78913233_C_A | chr15:78913233 | -0.106 | -0.190 | -0.300 | — |
| chr15_78913173_T_C | chr15:78913173 | 0.133 | 0.226 | 0.294 | <0.001% |
| chr15_78913189_T_G | chr15:78913189 | -0.142 | -0.188 | -0.294 | — |
| chr15_78913237_G_T | chr15:78913237 | 0.166 | 0.279 | 0.276 | — |
| chr15_78913183_T_C | chr15:78913183 | -0.144 | -0.206 | -0.282 | <0.001% |
| chr15_78944937_C_A | chr15:78944937 | -0.160 | -0.030 | -0.094 | — |
| chr15_78913183_T_G | chr15:78913183 | -0.147 | -0.208 | -0.276 | — |
| chr15_78944906_A_G | chr15:78944906 | 0.156 | 0.066 | 0.071 | — |
| chr15_78913213_G_C | chr15:78913213 | 0.117 | 0.117 | 0.271 | — |
| chr15_78944935_C_G | chr15:78944935 | 0.040 | 0.030 | 0.271 | — |
| chr15_78913221_T_C | chr15:78913221 | -0.123 | -0.213 | -0.259 | — |
| chr15_78913181_T_C | chr15:78913181 | -0.145 | -0.221 | -0.235 | — |
| chr15_78913165_C_T | chr15:78913165 | -0.093 | -0.145 | -0.253 | — |
| chr15_78913228_T_C | chr15:78913228 | -0.112 | -0.193 | -0.253 | — |
| chr15_78913235_A_T | chr15:78913235 | 0.109 | 0.155 | 0.253 | — |
| chr15_78944907_C_G | chr15:78944907 | -0.130 | -0.008 | -0.247 | — |
| chr15_78913165_C_G | chr15:78913165 | -0.086 | -0.122 | -0.241 | — |
| chr15_78913174_A_C | chr15:78913174 | 0.110 | 0.162 | 0.241 | — |
| chr15_78913223_G_C | chr15:78913223 | -0.093 | -0.175 | -0.241 | — |
| chr15_78913228_T_G | chr15:78913228 | -0.103 | -0.203 | -0.241 | — |
| chr15_78944934_T_C | chr15:78944934 | -0.136 | -0.013 | -0.094 | — |
| chr15_78913233_C_G | chr15:78913233 | -0.105 | -0.195 | -0.235 | — |
| chr15_78913134_A_T | chr15:78913134 | -0.082 | -0.129 | -0.229 | — |
| chr15_78913165_C_A | chr15:78913165 | -0.091 | -0.094 | -0.229 | — |
| chr15_78913177_T_C | chr15:78913177 | 0.107 | 0.140 | 0.229 | — |
| chr15_78913190_T_A | chr15:78913190 | -0.114 | -0.066 | -0.229 | — |
| chr15_78944915_C_G | chr15:78944915 | -0.130 | -0.025 | 0.024 | — |
| chr15_78913215_C_A | chr15:78913215 | -0.065 | -0.117 | -0.226 | — |
| chr15_78913198_G_A | chr15:78913198 | 0.116 | 0.183 | 0.224 | 0.0039% |
| chr15_78913201_G_T | chr15:78913201 | -0.092 | -0.099 | -0.224 | — |
| chr15_78944917_G_T | chr15:78944917 | 0.110 | 0.117 | 0.224 | — |
| chr15_78944928_G_A | chr15:78944928 | 0.023 | -0.018 | 0.224 | — |
| chr15_78928806_T_G | chr15:78928806 | -0.003 | -0.032 | -0.218 | — |
| chr15_78944909_G_C | chr15:78944909 | -0.123 | -0.038 | -0.082 | — |
| chr15_78913116_T_A | chr15:78913116 | 0.067 | 0.168 | 0.212 | — |
| chr15_78913152_A_C | chr15:78913152 | -0.082 | -0.129 | -0.212 | — |
| chr15_78913171_A_C | chr15:78913171 | 0.072 | 0.119 | 0.212 | — |
| chr15_78913223_G_A | chr15:78913223 | -0.074 | -0.129 | -0.212 | — |
| chr15_78913236_G_T | chr15:78913236 | 0.110 | 0.183 | 0.206 | — |
| chr15_78913225_A_T | chr15:78913225 | -0.087 | -0.155 | -0.203 | — |
| chr15_78913125_T_C | chr15:78913125 | 0.095 | 0.109 | 0.200 | — |
| chr15_78913156_C_T | chr15:78913156 | -0.071 | -0.091 | -0.200 | — |
| chr15_78913139_C_T | chr15:78913139 | -0.059 | -0.104 | -0.194 | — |
| chr15_78913148_G_T | chr15:78913148 | -0.067 | -0.094 | -0.194 | — |
| chr15_78913207_G_T | chr15:78913207 | -0.061 | -0.117 | -0.194 | — |
| chr15_78913232_C_A | chr15:78913232 | -0.087 | -0.190 | -0.194 | — |
| chr15_78913162_G_A | chr15:78913162 | -0.068 | -0.091 | -0.188 | — |
| chr15_78913200_T_G | chr15:78913200 | -0.076 | -0.162 | -0.188 | — |
| chr15_78913206_A_T | chr15:78913206 | -0.077 | -0.152 | -0.188 | — |
| chr15_78913229_G_T | chr15:78913229 | -0.067 | -0.160 | -0.188 | — |
| chr15_78944924_A_T | chr15:78944924 | 0.070 | 0.046 | 0.188 | — |
| chr15_78944928_G_T | chr15:78944928 | 0.070 | 0.010 | 0.188 | — |
| chr15_78913153_A_G | chr15:78913153 | 0.083 | 0.107 | 0.182 | — |
| chr15_78913236_G_A | chr15:78913236 | 0.103 | 0.185 | 0.176 | — |
| chr15_78913237_G_C | chr15:78913237 | 0.084 | 0.094 | 0.182 | — |
| chr15_78944918_C_G | chr15:78944918 | -0.103 | -0.051 | -0.082 | — |
| chr15_78913196_A_G | chr15:78913196 | 0.065 | 0.081 | 0.176 | — |
| chr15_78913198_G_T | chr15:78913198 | 0.082 | 0.112 | 0.176 | — |
| chr15_78913210_A_T | chr15:78913210 | -0.063 | -0.081 | -0.176 | — |
| chr15_78913223_G_T | chr15:78913223 | -0.067 | -0.122 | -0.176 | — |
| chr15_78913229_G_A | chr15:78913229 | -0.063 | -0.152 | -0.176 | — |
| chr15_78913130_G_A | chr15:78913130 | -0.058 | -0.086 | -0.171 | — |
| chr15_78913154_T_C | chr15:78913154 | 0.067 | 0.089 | 0.171 | — |
| chr15_78913170_G_C | chr15:78913170 | 0.070 | 0.122 | 0.171 | — |
| chr15_78913180_T_A | chr15:78913180 | -0.083 | -0.119 | -0.171 | — |
| chr15_78913229_G_C | chr15:78913229 | -0.063 | -0.150 | -0.171 | — |
| chr15_78944913_G_A | chr15:78944913 | 0.097 | 0.071 | 0.059 | — |
| chr15_78944932_A_C | chr15:78944932 | -0.097 | -0.071 | 0.082 | — |
| chr15_78913188_T_G | chr15:78913188 | -0.096 | -0.010 | -0.159 | — |
| chr15_78913143_G_A | chr15:78913143 | -0.059 | -0.102 | -0.168 | — |
| chr15_78913159_C_A | chr15:78913159 | -0.052 | -0.076 | -0.165 | — |
| chr15_78913201_G_A | chr15:78913201 | -0.088 | -0.051 | -0.165 | — |
| chr15_78928803_T_G | chr15:78928803 | -0.006 | -0.029 | -0.165 | — |
| chr15_78944919_A_G | chr15:78944919 | 0.020 | -0.013 | -0.165 | — |
| chr15_78913126_A_G | chr15:78913126 | 0.078 | 0.076 | 0.159 | — |
| chr15_78913174_A_T | chr15:78913174 | 0.076 | 0.102 | 0.159 | — |
| chr15_78913215_C_G | chr15:78913215 | -0.055 | -0.089 | -0.159 | — |
| chr15_78913216_T_A | chr15:78913216 | 0.081 | 0.117 | 0.159 | — |
| chr15_78944912_C_A | chr15:78944912 | -0.090 | -0.020 | -0.118 | — |
| chr15_78944923_C_A | chr15:78944923 | -0.090 | -0.005 | -0.059 | <0.001% |
| chr15_78944933_C_A | chr15:78944933 | 0.077 | 0.018 | -0.153 | — |
| chr15_78944937_C_G | chr15:78944937 | -0.087 | -0.030 | 0.000 | — |
| chr15_78913124_A_C | chr15:78913124 | 0.063 | 0.071 | 0.147 | — |
| chr15_78913139_C_A | chr15:78913139 | -0.033 | -0.076 | -0.147 | — |
| chr15_78913148_G_C | chr15:78913148 | -0.060 | -0.089 | -0.147 | — |
| chr15_78913176_G_C | chr15:78913176 | 0.077 | 0.099 | 0.147 | — |
| chr15_78913212_T_A | chr15:78913212 | 0.066 | 0.107 | 0.147 | — |
| chr15_78913213_G_T | chr15:78913213 | 0.073 | 0.160 | 0.147 | — |
| chr15_78913215_C_T | chr15:78913215 | -0.037 | -0.063 | -0.147 | — |
| chr15_78913239_A_T | chr15:78913239 | 0.072 | 0.109 | 0.147 | — |
| chr15_78913241_C_G | chr15:78913241 | 0.052 | 0.084 | 0.147 | — |
| chr15_78913241_C_T | chr15:78913241 | 0.083 | 0.185 | 0.141 | — |
| chr15_78944917_G_A | chr15:78944917 | 0.083 | 0.058 | 0.047 | — |
| chr15_78913240_A_C | chr15:78913240 | 0.081 | 0.152 | 0.141 | — |
| chr15_78913125_T_G | chr15:78913125 | 0.061 | 0.058 | 0.141 | — |
| chr15_78913149_C_T | chr15:78913149 | -0.046 | -0.071 | -0.141 | — |
| chr15_78913200_T_A | chr15:78913200 | 0.072 | 0.096 | 0.141 | — |
| chr15_78913234_C_A | chr15:78913234 | -0.062 | -0.114 | -0.141 | — |
| chr15_78944916_G_A | chr15:78944916 | 0.080 | 0.041 | -0.035 | 0.0039% |
| chr15_78913195_C_T | chr15:78913195 | -0.047 | -0.069 | -0.138 | — |
| chr15_78913231_A_T | chr15:78913231 | 0.048 | 0.048 | 0.138 | — |
| chr15_78913159_C_T | chr15:78913159 | -0.042 | -0.051 | -0.135 | — |
| chr15_78913188_T_C | chr15:78913188 | -0.065 | -0.015 | -0.135 | — |
| chr15_78913192_G_C | chr15:78913192 | 0.066 | 0.084 | 0.135 | — |
| chr15_78913193_C_A | chr15:78913193 | -0.042 | -0.089 | -0.135 | — |
| chr15_78913208_T_G | chr15:78913208 | 0.046 | 0.069 | 0.135 | — |
| chr15_78913211_A_C | chr15:78913211 | 0.053 | 0.061 | 0.135 | — |
| chr15_78913219_G_A | chr15:78913219 | 0.064 | 0.119 | 0.135 | — |
| chr15_78928685_C_G | chr15:78928685 | -0.006 | -0.014 | -0.135 | — |
| chr15_78928720_A_G | chr15:78928720 | -0.011 | 0.000 | -0.135 | — |
| chr15_78944910_T_C | chr15:78944910 | 0.077 | 0.000 | 0.047 | — |
| chr15_78944911_T_A | chr15:78944911 | 0.070 | 0.013 | 0.135 | — |
| chr15_78944911_T_G | chr15:78944911 | 0.030 | -0.038 | 0.135 | — |
| chr15_78944915_C_A | chr15:78944915 | -0.077 | -0.025 | -0.106 | — |
| chr15_78944932_A_G | chr15:78944932 | -0.077 | -0.023 | -0.012 | — |
| chr15_78913209_G_C | chr15:78913209 | 0.075 | 0.107 | 0.100 | — |
| chr15_78913227_T_A | chr15:78913227 | -0.037 | -0.109 | -0.132 | — |
| chr15_78913213_G_A | chr15:78913213 | 0.074 | 0.099 | 0.124 | — |
| chr15_78913136_T_C | chr15:78913136 | 0.047 | 0.046 | 0.129 | — |
| chr15_78928809_T_C | chr15:78928809 | 0.009 | 0.000 | 0.129 | — |
| chr15_78944919_A_C | chr15:78944919 | -0.057 | -0.043 | -0.129 | — |
| chr15_78944925_G_T | chr15:78944925 | 0.050 | 0.038 | 0.129 | — |
| chr15_78944936_C_T | chr15:78944936 | -0.073 | -0.020 | 0.071 | — |
| chr15_78944938_A_C | chr15:78944938 | -0.010 | -0.010 | -0.129 | — |
| chr15_78913121_G_T | chr15:78913121 | -0.056 | -0.107 | -0.124 | — |
| chr15_78913156_C_G | chr15:78913156 | 0.069 | 0.099 | 0.124 | — |
| chr15_78913161_A_C | chr15:78913161 | -0.065 | -0.099 | -0.124 | — |
| chr15_78928687_T_G | chr15:78928687 | -0.015 | -0.011 | -0.124 | — |
| chr15_78944931_G_A | chr15:78944931 | 0.070 | 0.015 | 0.024 | — |
| chr15_78913125_T_A | chr15:78913125 | 0.054 | 0.056 | 0.118 | — |
| chr15_78913133_A_C | chr15:78913133 | 0.044 | 0.066 | 0.118 | — |
| chr15_78913142_A_C | chr15:78913142 | -0.066 | -0.117 | -0.118 | — |
| chr15_78913143_G_T | chr15:78913143 | -0.046 | -0.071 | -0.118 | — |
| chr15_78913154_T_G | chr15:78913154 | -0.057 | -0.102 | -0.118 | — |
| chr15_78913162_G_C | chr15:78913162 | -0.057 | -0.069 | -0.118 | — |
| chr15_78913217_G_A | chr15:78913217 | 0.051 | 0.094 | 0.118 | — |
| chr15_78928718_G_C | chr15:78928718 | 0.006 | 0.000 | 0.118 | — |
| chr15_78928796_A_G | chr15:78928796 | 0.000 | -0.023 | -0.118 | — |
| chr15_78944920_C_T | chr15:78944920 | -0.033 | 0.020 | -0.118 | — |
| chr15_78944922_G_A | chr15:78944922 | 0.067 | 0.056 | 0.059 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.