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DEAF1

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near DEAF1

chr11:544,219..807,083, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr11_555079_G_C	chr11:555079	-1.000	-0.345	-1.000	0.0020%
chr11_555078_G_C	chr11:555078	-1.000	-0.344	-1.000	0.0046%
chr11_555078_G_T	chr11:555078	-1.000	-0.331	-1.000	<0.001%
chr11_555081_G_A	chr11:555081	-0.981	-0.240	-1.000	0.0020%
chr11_559937_T_A	chr11:559937	0.920	1.000	0.800	<0.001%
chr11_560482_C_T	chr11:560482	0.819	1.000	0.765	0.0033%
chr11_559877_C_T	chr11:559877	-0.596	-0.954	-1.000	0.011%
chr11_553619_G_T	chr11:553619	0.676	0.840	1.000	<0.001%
chr11_559825_T_C	chr11:559825	0.627	0.873	1.000	<0.001%
chr11_554926_G_C	chr11:554926	-0.314	-0.209	-1.000	<0.001%
chr11_555080_G_C	chr11:555080	-0.557	-0.120	-0.918	<0.001%
chr11_561199_G_T	chr11:561199	0.082	0.113	0.947	0.0033%
chr11_553518_A_G	chr11:553518	-0.314	-0.433	-0.941	0.0013%
chr11_551758_G_C	chr11:551758	0.531	0.231	0.735	<0.001%
chr11_555080_G_A	chr11:555080	-0.512	-0.106	-0.757	<0.001%
chr11_561153_G_T	chr11:561153	0.110	0.140	0.900	0.015%
chr11_561205_G_T	chr11:561205	0.087	0.103	0.888	<0.001%
chr11_560808_G_T	chr11:560808	0.146	0.353	0.882	<0.001%
chr11_554923_C_T	chr11:554923	0.182	0.195	0.853	<0.001%
chr11_561210_C_T	chr11:561210	0.023	0.102	0.853	<0.001%
chr11_554923_C_A	chr11:554923	0.203	0.186	0.829	0.020%
chr11_561230_G_T	chr11:561230	0.025	0.098	0.829	<0.001%
chr11_560475_G_C	chr11:560475	-0.459	-0.787	-0.235	<0.001%
chr11_561215_C_A	chr11:561215	0.067	0.119	0.812	0.0086%
chr11_551112_C_T	chr11:551112	0.072	0.161	0.788	0.0013%
chr11_561231_C_T	chr11:561231	0.032	0.103	0.788	<0.001%
chr11_560810_C_G	chr11:560810	-0.443	-0.105	-0.706	0.0017%
chr11_559830_G_C	chr11:559830	0.441	0.731	0.765	<0.001%
chr11_560485_C_T	chr11:560485	0.436	0.147	0.576	0.0013%
chr11_560875_A_G	chr11:560875	-0.433	-0.145	-0.724	0.0048%
chr11_561170_G_A	chr11:561170	0.020	0.079	0.759	<0.001%
chr11_559878_G_A	chr11:559878	-0.313	-0.505	-0.741	0.0020%
chr11_560842_G_A	chr11:560842	0.293	0.246	0.741	<0.001%
chr11_560720_C_T	chr11:560720	-0.416	-0.230	-0.538	0.0013%
chr11_561158_T_C	chr11:561158	-0.120	-0.061	-0.729	0.0099%
chr11_554937_C_T	chr11:554937	0.180	0.159	0.715	<0.001%
chr11_551122_C_T	chr11:551122	0.055	0.119	0.712	<0.001%
chr11_561221_T_G	chr11:561221	-0.017	-0.088	-0.700	<0.001%
chr11_560997_G_A	chr11:560997	0.176	0.103	0.694	<0.001%
chr11_559787_T_G	chr11:559787	0.386	0.383	0.647	<0.001%
chr11_561190_C_T	chr11:561190	0.020	0.072	0.682	0.0066%
chr11_554947_C_T	chr11:554947	0.221	0.115	0.676	<0.001%
chr11_554999_T_A	chr11:554999	0.233	0.075	0.676	0.0066%
chr11_561149_C_T	chr11:561149	0.083	0.070	0.676	0.0040%
chr11_561194_C_T	chr11:561194	0.015	0.082	0.671	<0.001%
chr11_555033_A_C	chr11:555033	-0.087	-0.085	-0.668	0.0033%
chr11_551116_C_T	chr11:551116	0.073	0.127	0.665	<0.001%
chr11_560843_G_C	chr11:560843	0.223	0.278	0.665	0.054%
chr11_561206_G_A	chr11:561206	0.015	0.051	0.665	<0.001%
chr11_559844_C_T	chr11:559844	0.374	0.774	0.588	0.0020%
chr11_560835_T_G	chr11:560835	-0.210	-0.227	-0.644	0.0037%
chr11_560717_T_A	chr11:560717	-0.363	-0.270	-0.588	<0.001%
chr11_561175_A_C	chr11:561175	-0.025	-0.051	-0.641	<0.001%
chr11_559762_A_G	chr11:559762	-0.328	-0.640	-0.635	<0.001%
chr11_560427_G_A	chr11:560427	-0.359	-0.429	-0.447	0.0013%
chr11_553619_G_A	chr11:553619	0.316	0.405	0.629	0.0053%
chr11_559797_C_T	chr11:559797	-0.356	-0.459	-0.506	0.035%
chr11_560738_C_T	chr11:560738	-0.356	-0.102	-0.206	<0.001%
chr11_561262_A_G	chr11:561262	-0.032	-0.059	-0.629	<0.001%
chr11_553517_G_C	chr11:553517	0.215	0.240	0.624	<0.001%
chr11_553593_G_T	chr11:553593	0.283	0.349	0.624	0.012%
chr11_554919_C_T	chr11:554919	0.126	0.165	0.618	<0.001%
chr11_560843_G_T	chr11:560843	0.170	0.237	0.618	<0.001%
chr11_561226_G_T	chr11:561226	-0.032	0.082	0.618	0.0099%
chr11_561232_G_A	chr11:561232	0.028	0.052	0.618	<0.001%
chr11_559851_C_T	chr11:559851	-0.346	-0.462	-0.506	0.0033%
chr11_555115_G_T	chr11:555115	0.342	0.027	0.268	<0.001%
chr11_561184_C_T	chr11:561184	0.030	0.076	0.600	0.0059%
chr11_560999_C_T	chr11:560999	0.126	0.088	0.594	<0.001%
chr11_561160_C_T	chr11:561160	-0.018	0.070	0.594	<0.001%
chr11_551115_C_T	chr11:551115	0.061	0.106	0.585	0.0039%
chr11_560519_G_A	chr11:560519	-0.329	-0.563	-0.306	<0.001%
chr11_561228_C_T	chr11:561228	0.000	0.069	0.582	<0.001%
chr11_553571_C_T	chr11:553571	0.270	0.310	0.576	<0.001%
chr11_553597_C_T	chr11:553597	0.324	0.404	0.576	0.0020%
chr11_559882_C_G	chr11:559882	0.324	0.358	0.494	<0.001%
chr11_560752_G_A	chr11:560752	0.030	0.118	0.571	0.0020%
chr11_560848_T_G	chr11:560848	-0.260	-0.162	-0.568	0.0068%
chr11_559908_C_T	chr11:559908	-0.193	-0.299	-0.565	0.015%
chr11_553623_C_T	chr11:553623	-0.318	-0.377	-0.541	0.0099%
chr11_554959_C_T	chr11:554959	0.131	0.120	0.562	0.0046%
chr11_553516_G_A	chr11:553516	0.200	0.293	0.559	<0.001%
chr11_553553_G_A	chr11:553553	-0.224	-0.287	-0.559	<0.001%
chr11_561153_G_A	chr11:561153	0.077	0.077	0.559	<0.001%
chr11_560281_G_A	chr11:560281	0.314	0.452	0.353	0.0013%
chr11_559831_C_T	chr11:559831	0.136	0.419	0.553	0.0013%
chr11_560845_G_A	chr11:560845	0.156	0.203	0.553	0.0013%
chr11_560979_G_A	chr11:560979	0.313	0.107	0.553	0.013%
chr11_561021_G_A	chr11:561021	0.082	0.034	0.541	0.0093%
chr11_560447_C_T	chr11:560447	-0.303	-0.569	-0.518	<0.001%
chr11_560982_G_A	chr11:560982	0.271	0.072	0.535	0.013%
chr11_559850_C_T	chr11:559850	-0.291	-0.437	-0.529	0.0033%
chr11_561008_G_A	chr11:561008	0.266	0.071	0.529	0.0046%
chr11_559901_A_T	chr11:559901	0.296	0.396	0.412	0.0033%
chr11_561200_G_A	chr11:561200	-0.005	0.063	0.524	0.0026%
chr11_561341_G_A	chr11:561341	0.296	0.321	0.271	<0.001%
chr11_561185_C_T	chr11:561185	0.020	0.055	0.512	0.0013%
chr11_561186_C_T	chr11:561186	-0.003	0.047	0.512	<0.001%
chr11_561246_C_T	chr11:561246	0.023	0.046	0.512	0.0013%
chr11_553442_G_A	chr11:553442	0.176	0.227	0.506	0.0026%
chr11_554918_C_T	chr11:554918	0.159	0.128	0.506	<0.001%
chr11_559796_G_A	chr11:559796	0.260	0.414	0.506	0.0013%
chr11_561009_G_A	chr11:561009	0.286	0.085	0.376	0.0013%
chr11_561188_G_A	chr11:561188	0.023	0.058	0.506	0.0013%
chr11_559809_G_A	chr11:559809	-0.285	-0.353	-0.365	0.0013%
chr11_561010_G_A	chr11:561010	0.285	0.081	0.488	<0.001%
chr11_555114_G_C	chr11:555114	0.262	-0.014	0.501	0.0014%
chr11_553454_G_T	chr11:553454	0.217	0.339	0.500	<0.001%
chr11_560474_C_A	chr11:560474	-0.283	-0.386	-0.165	<0.001%
chr11_560837_G_A	chr11:560837	0.243	0.227	0.500	<0.001%
chr11_559773_C_A	chr11:559773	-0.271	-0.454	-0.494	0.308%
chr11_560970_G_A	chr11:560970	0.141	0.076	0.494	<0.001%
chr11_561004_G_T	chr11:561004	0.133	0.062	0.494	<0.001%
chr11_561278_C_T	chr11:561278	0.010	0.055	0.494	0.028%
chr11_560981_G_A	chr11:560981	0.276	0.070	0.329	0.014%
chr11_554927_C_G	chr11:554927	0.170	0.110	0.485	0.0026%
chr11_554947_C_G	chr11:554947	0.275	0.077	0.362	<0.001%
chr11_561040_C_T	chr11:561040	0.095	0.045	0.482	0.0013%
chr11_561097_G_A	chr11:561097	0.083	0.053	0.482	0.0013%
chr11_561269_A_G	chr11:561269	0.052	-0.012	-0.482	<0.001%
chr11_551104_T_C	chr11:551104	-0.068	-0.069	-0.476	<0.001%
chr11_554950_C_G	chr11:554950	0.270	0.068	0.332	<0.001%
chr11_560469_C_T	chr11:560469	-0.270	-0.563	-0.306	<0.001%
chr11_560748_G_A	chr11:560748	0.203	0.176	0.476	<0.001%
chr11_561007_C_T	chr11:561007	0.017	0.062	0.476	0.0013%
chr11_561042_C_T	chr11:561042	0.058	0.049	0.476	0.0013%
chr11_561069_G_A	chr11:561069	0.070	0.044	0.476	<0.001%
chr11_555125_G_A	chr11:555125	0.268	0.040	0.446	<0.001%
chr11_554967_C_T	chr11:554967	0.151	0.071	0.471	<0.001%
chr11_559857_T_G	chr11:559857	-0.266	-0.373	-0.329	<0.001%
chr11_560282_G_C	chr11:560282	0.203	0.119	0.471	0.0026%
chr11_553542_T_G	chr11:553542	-0.235	-0.362	-0.459	0.0033%
chr11_560284_G_A	chr11:560284	0.150	0.091	0.459	0.0039%
chr11_560805_G_C	chr11:560805	0.163	0.114	0.459	<0.001%
chr11_560973_G_A	chr11:560973	0.110	0.078	0.459	0.0027%
chr11_561027_C_T	chr11:561027	0.047	0.056	0.459	0.017%
chr11_553545_G_A	chr11:553545	-0.196	-0.272	-0.453	<0.001%
chr11_561026_G_A	chr11:561026	0.013	0.043	0.453	2.40%
chr11_551365_C_T	chr11:551365	0.047	0.077	0.447	0.014%
chr11_559979_A_C	chr11:559979	0.253	0.373	0.318	0.0013%
chr11_561076_G_T	chr11:561076	0.017	0.051	0.447	0.0020%
chr11_544243_G_A	chr11:544243	0.023	0.133	0.441	<0.001%
chr11_560831_T_G	chr11:560831	-0.250	-0.091	-0.229	0.027%
chr11_561068_C_T	chr11:561068	0.005	0.056	0.441	2.81%
chr11_559880_C_T	chr11:559880	0.028	0.028	0.435	<0.001%
chr11_560970_G_T	chr11:560970	0.110	0.057	0.435	<0.001%
chr11_561145_G_A	chr11:561145	0.003	0.046	0.435	0.0046%
chr11_559783_A_G	chr11:559783	-0.243	-0.320	-0.400	0.011%
chr11_561019_C_T	chr11:561019	0.050	0.058	0.429	0.0033%
chr11_551368_C_G	chr11:551368	0.059	0.084	0.426	0.0013%
chr11_553543_C_T	chr11:553543	-0.205	-0.303	-0.424	0.0033%
chr11_559795_C_T	chr11:559795	-0.240	-0.371	-0.353	0.029%
chr11_555030_G_A	chr11:555030	-0.005	-0.071	-0.421	0.0086%
chr11_555055_G_C	chr11:555055	-0.236	-0.058	-0.335	0.0020%
chr11_560974_C_T	chr11:560974	0.100	0.040	0.415	<0.001%
chr11_560216_A_G	chr11:560216	0.203	0.173	0.412	<0.001%
chr11_561070_G_A	chr11:561070	0.093	0.018	0.412	<0.001%
chr11_561261_C_T	chr11:561261	0.027	0.061	0.412	<0.001%
chr11_555094_C_G	chr11:555094	-0.232	-0.012	-0.131	<0.001%
chr11_560522_C_A	chr11:560522	0.230	0.336	0.053	<0.001%
chr11_560606_G_C	chr11:560606	0.230	0.097	-0.079	<0.001%
chr11_553443_G_A	chr11:553443	0.119	0.141	0.400	0.0026%
chr11_560257_G_C	chr11:560257	0.126	0.132	0.400	0.0039%
chr11_560966_C_A	chr11:560966	0.150	0.060	0.400	0.0027%
chr11_551348_C_A	chr11:551348	0.073	0.057	0.397	<0.001%
chr11_560964_T_G	chr11:560964	-0.225	-0.047	-0.276	<0.001%
chr11_561012_C_T	chr11:561012	0.190	0.074	0.397	0.0053%
chr11_551117_C_T	chr11:551117	0.054	0.077	0.394	<0.001%
chr11_561163_C_T	chr11:561163	-0.005	0.036	0.394	0.0013%
chr11_561177_G_T	chr11:561177	0.023	0.070	0.394	<0.001%
chr11_560960_C_T	chr11:560960	0.128	0.058	0.388	0.0100%
chr11_560975_G_T	chr11:560975	0.058	0.062	0.388	0.099%
chr11_561006_G_A	chr11:561006	0.130	0.070	0.388	0.0020%
chr11_560219_A_T	chr11:560219	0.216	0.277	0.212	0.016%
chr11_561049_T_G	chr11:561049	-0.087	-0.036	-0.382	<0.001%
chr11_561096_C_T	chr11:561096	0.040	0.034	0.382	<0.001%
chr11_560664_A_G	chr11:560664	0.030	0.044	-0.376	<0.001%
chr11_560880_G_A	chr11:560880	0.045	0.092	0.371	0.096%
chr11_560971_C_T	chr11:560971	0.097	0.058	0.371	<0.001%
chr11_560975_G_A	chr11:560975	0.068	0.062	0.371	<0.001%
chr11_551347_C_A	chr11:551347	0.034	0.069	0.368	<0.001%
chr11_555071_G_A	chr11:555071	-0.169	-0.040	-0.368	0.0027%
chr11_560974_C_A	chr11:560974	0.035	0.035	0.368	0.0033%
chr11_561029_C_T	chr11:561029	0.073	0.039	0.365	0.0053%
chr11_561054_G_A	chr11:561054	0.065	0.039	0.365	0.0099%
chr11_561256_G_A	chr11:561256	-0.007	0.051	0.365	0.024%
chr11_554971_C_T	chr11:554971	0.120	0.062	0.363	<0.001%
chr11_551347_C_G	chr11:551347	0.032	0.058	0.362	0.0013%
chr11_560228_G_A	chr11:560228	0.205	0.277	0.294	<0.001%
chr11_561032_A_G	chr11:561032	-0.068	-0.049	-0.359	<0.001%
chr11_560795_T_C	chr11:560795	0.200	0.048	0.059	0.0027%
chr11_561259_C_T	chr11:561259	0.023	0.048	0.353	<0.001%
chr11_561271_G_A	chr11:561271	0.033	0.070	0.353	<0.001%
chr11_560991_T_C	chr11:560991	-0.077	-0.030	-0.350	0.0040%
chr11_554951_C_T	chr11:554951	0.107	0.078	0.347	0.0039%
chr11_561146_C_T	chr11:561146	0.042	0.046	0.347	<0.001%
chr11_561349_G_C	chr11:561349	-0.196	-0.145	-0.059	<0.001%
chr11_554903_A_G	chr11:554903	0.112	0.037	0.344	0.0040%
chr11_555124_G_C	chr11:555124	0.172	0.020	0.344	0.063%
chr11_559836_G_A	chr11:559836	0.191	0.360	0.341	0.0020%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.