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FAM20C
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near FAM20C
chr7:92,570..360,772, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr7_142483_A_T | chr7:142483 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr7_142486_G_C | chr7:142486 | -1.000 | -1.000 | -1.000 | 0.0059% |
| chr7_142486_G_A | chr7:142486 | -1.000 | -1.000 | -1.000 | 0.190% |
| chr7_142430_G_A | chr7:142430 | 1.000 | 1.000 | 1.000 | 0.0020% |
| chr7_142482_C_G | chr7:142482 | -1.000 | -1.000 | -1.000 | 0.0013% |
| chr7_120805_C_A | chr7:120805 | 1.000 | 1.000 | 1.000 | 0.0013% |
| chr7_150177_G_A | chr7:150177 | 1.000 | 1.000 | 1.000 | 0.0013% |
| chr7_142479_G_A | chr7:142479 | -1.000 | -1.000 | -1.000 | 0.0059% |
| chr7_142436_G_A | chr7:142436 | -1.000 | -1.000 | -0.906 | 0.0059% |
| chr7_120806_C_G | chr7:120806 | 1.000 | 1.000 | 1.000 | <0.001% |
| chr7_142490_A_C | chr7:142490 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr7_149407_C_G | chr7:149407 | 0.334 | 0.292 | 1.000 | <0.001% |
| chr7_142306_G_A | chr7:142306 | 1.000 | 0.005 | 0.700 | <0.001% |
| chr7_120784_A_G | chr7:120784 | -1.000 | -0.973 | -1.000 | <0.001% |
| chr7_150860_C_A | chr7:150860 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr7_150875_G_A | chr7:150875 | 1.000 | 1.000 | 1.000 | 0.840% |
| chr7_120854_C_T | chr7:120854 | -0.997 | -0.991 | -1.000 | 0.0020% |
| chr7_120773_G_C | chr7:120773 | -0.833 | -0.782 | -1.000 | 0.0033% |
| chr7_191983_G_A | chr7:191983 | 0.208 | 0.265 | 1.000 | <0.001% |
| chr7_150854_T_G | chr7:150854 | -0.875 | -1.000 | -1.000 | 0.0013% |
| chr7_142404_C_T | chr7:142404 | -0.835 | -0.820 | -0.382 | 0.0013% |
| chr7_120863_G_A | chr7:120863 | 0.819 | 0.218 | 0.882 | <0.001% |
| chr7_149289_G_C | chr7:149289 | 0.406 | 0.094 | 1.000 | <0.001% |
| chr7_149292_C_G | chr7:149292 | 0.343 | 0.020 | 1.000 | <0.001% |
| chr7_150857_G_C | chr7:150857 | -0.777 | -1.000 | -1.000 | <0.001% |
| chr7_120774_G_C | chr7:120774 | -0.792 | -0.783 | -1.000 | <0.001% |
| chr7_120826_G_A | chr7:120826 | 0.789 | 0.670 | 0.924 | <0.001% |
| chr7_191979_G_A | chr7:191979 | 0.198 | 0.244 | 1.000 | <0.001% |
| chr7_149288_T_C | chr7:149288 | 0.423 | 0.066 | 1.000 | <0.001% |
| chr7_120827_G_A | chr7:120827 | 0.769 | 0.760 | 1.000 | 0.0039% |
| chr7_142505_G_A | chr7:142505 | 0.752 | 0.789 | 0.529 | 0.0013% |
| chr7_120782_C_T | chr7:120782 | -0.690 | -0.586 | -1.000 | <0.001% |
| chr7_120830_T_C | chr7:120830 | 0.720 | 0.665 | 0.800 | 0.0013% |
| chr7_191987_G_A | chr7:191987 | 0.210 | 0.154 | 1.000 | 0.0018% |
| chr7_142477_G_T | chr7:142477 | -0.702 | -0.815 | -0.594 | <0.001% |
| chr7_150203_A_C | chr7:150203 | -0.700 | -0.868 | -1.000 | 0.0013% |
| chr7_191983_G_T | chr7:191983 | 0.156 | 0.221 | 1.000 | 0.021% |
| chr7_149406_G_T | chr7:149406 | 0.413 | 0.416 | 1.000 | 0.0020% |
| chr7_142494_C_T | chr7:142494 | -0.669 | -0.787 | -0.506 | 0.0026% |
| chr7_191986_G_A | chr7:191986 | 0.203 | 0.132 | 1.000 | 0.062% |
| chr7_120796_T_C | chr7:120796 | -0.617 | -0.579 | -0.841 | <0.001% |
| chr7_191982_G_T | chr7:191982 | 0.099 | 0.190 | 1.000 | 0.011% |
| chr7_120802_G_A | chr7:120802 | -0.604 | -0.576 | -0.765 | 0.0046% |
| chr7_150894_A_G | chr7:150894 | 0.396 | 0.594 | 1.000 | 0.0026% |
| chr7_171694_C_T | chr7:171694 | 0.584 | 0.602 | 0.821 | 0.0020% |
| chr7_142553_T_A | chr7:142553 | -0.581 | -0.617 | -0.424 | <0.001% |
| chr7_120846_A_C | chr7:120846 | -0.580 | -0.514 | -1.000 | 0.283% |
| chr7_191985_G_C | chr7:191985 | 0.254 | 0.063 | 1.000 | 0.023% |
| chr7_139654_G_A | chr7:139654 | 0.323 | 0.683 | 1.000 | 0.075% |
| chr7_142475_A_G | chr7:142475 | -0.564 | -0.673 | -0.335 | <0.001% |
| chr7_150935_G_A | chr7:150935 | -0.552 | -1.000 | -0.765 | 0.0013% |
| chr7_191983_G_C | chr7:191983 | 0.121 | 0.176 | 0.965 | <0.001% |
| chr7_120844_G_A | chr7:120844 | -0.545 | -0.484 | -0.947 | <0.001% |
| chr7_150908_T_C | chr7:150908 | -0.544 | -1.000 | -0.935 | 0.0013% |
| chr7_171695_G_T | chr7:171695 | 0.540 | 0.506 | 0.907 | 0.0066% |
| chr7_191982_G_C | chr7:191982 | 0.103 | 0.194 | 0.935 | 0.0079% |
| chr7_149409_C_A | chr7:149409 | 0.331 | 0.305 | 0.929 | <0.001% |
| chr7_150194_C_T | chr7:150194 | -0.334 | -0.574 | -0.929 | 0.0013% |
| chr7_142582_T_A | chr7:142582 | 0.524 | 0.528 | 0.359 | 0.0013% |
| chr7_142554_C_T | chr7:142554 | -0.519 | -0.619 | -0.441 | 0.0026% |
| chr7_150253_A_G | chr7:150253 | -0.512 | -0.622 | -0.659 | 3.50% |
| chr7_142471_G_A | chr7:142471 | -0.504 | -0.576 | -0.418 | 0.0026% |
| chr7_142585_T_C | chr7:142585 | -0.502 | -0.508 | -0.406 | 0.0013% |
| chr7_149163_C_T | chr7:149163 | 0.075 | -0.005 | 0.888 | <0.001% |
| chr7_149164_G_A | chr7:149164 | 0.223 | 0.157 | 0.882 | 0.0020% |
| chr7_149363_G_C | chr7:149363 | -0.206 | -0.185 | -0.882 | <0.001% |
| chr7_150838_G_C | chr7:150838 | 0.499 | 0.766 | 0.512 | <0.001% |
| chr7_149286_C_A | chr7:149286 | 0.186 | 0.135 | 0.871 | 0.0020% |
| chr7_142441_C_T | chr7:142441 | -0.489 | -0.434 | -0.335 | 0.0026% |
| chr7_191986_G_C | chr7:191986 | 0.185 | 0.083 | 0.862 | 0.067% |
| chr7_142617_T_C | chr7:142617 | 0.483 | 0.520 | 0.435 | 1.63% |
| chr7_142396_T_A | chr7:142396 | -0.481 | -0.523 | -0.347 | <0.001% |
| chr7_149400_T_C | chr7:149400 | 0.208 | 0.272 | 0.847 | <0.001% |
| chr7_150996_A_G | chr7:150996 | -0.476 | -0.784 | -0.471 | <0.001% |
| chr7_150165_C_G | chr7:150165 | -0.399 | -0.546 | -0.824 | 0.0013% |
| chr7_139658_G_T | chr7:139658 | 0.199 | 0.503 | 0.800 | 0.0046% |
| chr7_142591_T_C | chr7:142591 | -0.453 | -0.500 | -0.300 | <0.001% |
| chr7_149213_C_T | chr7:149213 | 0.183 | 0.269 | 0.800 | 0.106% |
| chr7_150897_C_T | chr7:150897 | -0.453 | -0.944 | -0.671 | <0.001% |
| chr7_150877_C_T | chr7:150877 | 0.451 | 0.761 | 0.553 | 0.605% |
| chr7_150917_C_T | chr7:150917 | -0.449 | -0.995 | -0.771 | <0.001% |
| chr7_149408_A_G | chr7:149408 | 0.275 | 0.173 | 0.788 | 0.0059% |
| chr7_191987_G_T | chr7:191987 | 0.100 | 0.083 | 0.788 | 0.071% |
| chr7_150978_A_T | chr7:150978 | 0.441 | 0.896 | 0.559 | 0.0092% |
| chr7_150157_G_T | chr7:150157 | -0.418 | -0.513 | -0.765 | <0.001% |
| chr7_191985_G_A | chr7:191985 | 0.097 | 0.053 | 0.762 | 0.0063% |
| chr7_142448_G_A | chr7:142448 | -0.428 | -0.391 | -0.341 | 0.0072% |
| chr7_150975_T_C | chr7:150975 | 0.424 | 0.766 | 0.571 | 0.0039% |
| chr7_191987_G_C | chr7:191987 | 0.129 | 0.086 | 0.741 | 0.067% |
| chr7_192126_C_T | chr7:192126 | 0.233 | 0.062 | 0.738 | <0.001% |
| chr7_142422_G_A | chr7:142422 | 0.416 | 0.411 | 0.282 | 0.0013% |
| chr7_120867_C_G | chr7:120867 | -0.413 | -0.201 | -0.559 | <0.001% |
| chr7_150242_G_A | chr7:150242 | -0.411 | -0.457 | -0.624 | <0.001% |
| chr7_150229_C_G | chr7:150229 | -0.408 | -0.541 | -0.718 | <0.001% |
| chr7_142655_G_C | chr7:142655 | 0.406 | 0.452 | 0.382 | <0.001% |
| chr7_142508_C_G | chr7:142508 | 0.394 | 0.444 | 0.371 | 0.0013% |
| chr7_149170_G_A | chr7:149170 | 0.088 | 0.025 | 0.694 | 0.054% |
| chr7_150107_G_A | chr7:150107 | -0.300 | -0.406 | -0.694 | <0.001% |
| chr7_149140_G_T | chr7:149140 | -0.191 | -0.119 | -0.688 | <0.001% |
| chr7_149335_C_G | chr7:149335 | 0.186 | 0.157 | 0.682 | <0.001% |
| chr7_120867_C_T | chr7:120867 | -0.383 | -0.128 | -0.535 | <0.001% |
| chr7_120745_A_C | chr7:120745 | -0.381 | -0.385 | -0.571 | <0.001% |
| chr7_149151_G_A | chr7:149151 | -0.379 | -0.162 | -0.653 | 0.0020% |
| chr7_120752_G_T | chr7:120752 | -0.375 | -0.369 | -0.606 | <0.001% |
| chr7_149062_C_A | chr7:149062 | -0.208 | -0.201 | -0.656 | 0.0013% |
| chr7_149162_G_A | chr7:149162 | 0.100 | 0.124 | 0.647 | 0.0020% |
| chr7_142587_G_C | chr7:142587 | -0.364 | -0.376 | -0.235 | 0.0026% |
| chr7_149062_C_T | chr7:149062 | 0.148 | 0.190 | 0.641 | <0.001% |
| chr7_150244_C_T | chr7:150244 | -0.361 | -0.406 | -0.494 | <0.001% |
| chr7_142554_C_A | chr7:142554 | -0.358 | -0.411 | -0.294 | <0.001% |
| chr7_149120_G_C | chr7:149120 | -0.245 | -0.201 | -0.629 | <0.001% |
| chr7_149139_C_A | chr7:149139 | -0.175 | -0.127 | -0.624 | 0.0026% |
| chr7_171738_G_A | chr7:171738 | 0.351 | 0.293 | 0.472 | <0.001% |
| chr7_120857_G_A | chr7:120857 | 0.335 | -0.043 | 0.329 | <0.001% |
| chr7_142453_G_A | chr7:142453 | -0.334 | -0.340 | -0.353 | 0.0033% |
| chr7_142490_A_G | chr7:142490 | -0.333 | -0.414 | -0.265 | <0.001% |
| chr7_120746_G_T | chr7:120746 | -0.332 | -0.260 | -0.424 | <0.001% |
| chr7_191981_G_T | chr7:191981 | 0.053 | 0.103 | 0.585 | 0.0012% |
| chr7_150203_A_G | chr7:150203 | -0.326 | -0.414 | -0.376 | 0.0053% |
| chr7_139821_G_A | chr7:139821 | 0.186 | 0.341 | 0.565 | 0.020% |
| chr7_149087_C_T | chr7:149087 | 0.125 | 0.206 | 0.565 | 0.0013% |
| chr7_149130_A_C | chr7:149130 | 0.276 | 0.129 | 0.565 | <0.001% |
| chr7_191974_G_C | chr7:191974 | 0.097 | 0.100 | 0.562 | 0.0096% |
| chr7_191986_G_T | chr7:191986 | 0.075 | 0.050 | 0.562 | 0.0018% |
| chr7_120716_G_C | chr7:120716 | -0.314 | -0.241 | -0.441 | <0.001% |
| chr7_171704_G_A | chr7:171704 | 0.309 | 0.306 | 0.554 | 0.020% |
| chr7_149118_G_T | chr7:149118 | -0.261 | -0.145 | -0.553 | 0.0013% |
| chr7_149270_C_T | chr7:149270 | -0.173 | -0.173 | -0.553 | 0.023% |
| chr7_149372_G_C | chr7:149372 | 0.268 | 0.211 | 0.553 | <0.001% |
| chr7_120916_G_T | chr7:120916 | 0.312 | 0.284 | 0.359 | 0.0026% |
| chr7_191974_G_A | chr7:191974 | 0.078 | 0.062 | 0.544 | 0.0087% |
| chr7_149355_T_G | chr7:149355 | -0.067 | -0.048 | 0.541 | <0.001% |
| chr7_142383_A_G | chr7:142383 | -0.303 | -0.487 | -0.294 | <0.001% |
| chr7_171692_G_C | chr7:171692 | -0.243 | -0.240 | -0.532 | <0.001% |
| chr7_120704_G_A | chr7:120704 | -0.300 | -0.254 | -0.376 | 0.019% |
| chr7_142507_C_G | chr7:142507 | 0.300 | 0.363 | 0.359 | <0.001% |
| chr7_149234_G_C | chr7:149234 | 0.206 | 0.109 | 0.529 | <0.001% |
| chr7_142341_A_G | chr7:142341 | -0.298 | -0.203 | -0.182 | <0.001% |
| chr7_150965_G_A | chr7:150965 | -0.293 | -0.584 | -0.459 | 0.039% |
| chr7_120741_G_A | chr7:120741 | 0.290 | 0.256 | 0.412 | 0.0026% |
| chr7_149041_G_C | chr7:149041 | 0.205 | 0.109 | 0.512 | 0.0026% |
| chr7_142316_C_G | chr7:142316 | 0.288 | 0.381 | 0.353 | 0.0020% |
| chr7_120729_C_T | chr7:120729 | -0.286 | -0.321 | -0.441 | <0.001% |
| chr7_149037_G_T | chr7:149037 | -0.067 | -0.091 | -0.506 | 0.0013% |
| chr7_149137_G_A | chr7:149137 | 0.171 | 0.112 | 0.506 | 0.0020% |
| chr7_149380_C_T | chr7:149380 | 0.113 | 0.152 | 0.506 | 0.0013% |
| chr7_150161_C_T | chr7:150161 | -0.285 | -0.320 | -0.459 | 0.018% |
| chr7_142539_A_G | chr7:142539 | 0.283 | 0.299 | 0.176 | <0.001% |
| chr7_142446_C_T | chr7:142446 | -0.281 | -0.124 | -0.141 | <0.001% |
| chr7_150178_C_T | chr7:150178 | -0.198 | -0.239 | -0.494 | <0.001% |
| chr7_150182_A_G | chr7:150182 | 0.241 | 0.282 | 0.494 | 0.0013% |
| chr7_150823_T_A | chr7:150823 | 0.280 | 0.477 | 0.218 | <0.001% |
| chr7_120690_A_T | chr7:120690 | -0.277 | -0.303 | -0.488 | <0.001% |
| chr7_142411_C_T | chr7:142411 | -0.002 | 0.251 | 0.488 | 0.0072% |
| chr7_149093_C_T | chr7:149093 | 0.203 | 0.165 | 0.488 | 0.0033% |
| chr7_150952_G_C | chr7:150952 | -0.276 | -0.388 | -0.335 | <0.001% |
| chr7_142514_C_T | chr7:142514 | -0.275 | -0.284 | -0.247 | <0.001% |
| chr7_192117_G_A | chr7:192117 | 0.126 | 0.039 | 0.485 | <0.001% |
| chr7_149095_A_G | chr7:149095 | 0.183 | 0.124 | 0.482 | 0.0013% |
| chr7_149270_C_G | chr7:149270 | -0.200 | -0.178 | -0.482 | <0.001% |
| chr7_149308_T_C | chr7:149308 | 0.130 | 0.102 | 0.482 | 0.0013% |
| chr7_149399_C_T | chr7:149399 | 0.098 | 0.094 | 0.482 | 0.0013% |
| chr7_142595_C_A | chr7:142595 | -0.271 | -0.244 | -0.124 | 0.0020% |
| chr7_149116_C_T | chr7:149116 | -0.146 | -0.142 | -0.476 | <0.001% |
| chr7_150929_G_A | chr7:150929 | -0.270 | -0.393 | -0.435 | <0.001% |
| chr7_149140_G_A | chr7:149140 | -0.133 | -0.053 | -0.471 | 0.0013% |
| chr7_149201_G_C | chr7:149201 | -0.193 | -0.137 | -0.471 | <0.001% |
| chr7_120838_G_A | chr7:120838 | 0.265 | 0.377 | 0.276 | <0.001% |
| chr7_120876_G_A | chr7:120876 | 0.265 | 0.013 | 0.059 | 0.0020% |
| chr7_120660_G_A | chr7:120660 | 0.263 | 0.279 | 0.376 | 0.527% |
| chr7_142450_G_A | chr7:142450 | -0.263 | -0.282 | -0.306 | 0.0013% |
| chr7_142633_C_T | chr7:142633 | -0.263 | -0.315 | -0.276 | <0.001% |
| chr7_120673_C_G | chr7:120673 | 0.261 | 0.264 | 0.318 | 0.0066% |
| chr7_149115_G_A | chr7:149115 | 0.121 | 0.160 | 0.459 | 0.0026% |
| chr7_149168_G_A | chr7:149168 | -0.043 | 0.020 | 0.459 | <0.001% |
| chr7_191973_G_A | chr7:191973 | 0.062 | 0.128 | 0.459 | 0.0039% |
| chr7_150893_G_T | chr7:150893 | -0.258 | -0.586 | -0.406 | <0.001% |
| chr7_142359_C_T | chr7:142359 | -0.256 | -0.259 | -0.218 | 0.0020% |
| chr7_171704_G_C | chr7:171704 | -0.196 | -0.184 | -0.451 | 0.0013% |
| chr7_149121_C_A | chr7:149121 | -0.181 | -0.063 | -0.447 | 0.0072% |
| chr7_149395_T_C | chr7:149395 | -0.158 | -0.185 | -0.447 | <0.001% |
| chr7_150200_C_G | chr7:150200 | 0.251 | 0.327 | 0.365 | <0.001% |
| chr7_120920_G_A | chr7:120920 | -0.223 | -0.218 | -0.441 | 0.0085% |
| chr7_150307_G_T | chr7:150307 | 0.250 | 0.213 | 0.112 | 0.0026% |
| chr7_192122_C_T | chr7:192122 | 0.022 | 0.065 | 0.441 | 0.023% |
| chr7_150899_G_A | chr7:150899 | -0.248 | -0.505 | -0.224 | <0.001% |
| chr7_142429_G_C | chr7:142429 | -0.246 | -0.155 | 0.047 | <0.001% |
| chr7_191988_G_A | chr7:191988 | 0.074 | -0.006 | 0.432 | <0.001% |
| chr7_192129_C_A | chr7:192129 | -0.003 | 0.055 | 0.426 | <0.001% |
| chr7_149342_A_T | chr7:149342 | -0.136 | -0.173 | -0.424 | <0.001% |
| chr7_150199_G_A | chr7:150199 | -0.195 | -0.259 | -0.424 | 0.0020% |
| chr7_120720_G_C | chr7:120720 | -0.234 | -0.245 | -0.329 | <0.001% |
| chr7_149413_C_G | chr7:149413 | -0.088 | -0.188 | -0.412 | <0.001% |
| chr7_150214_C_T | chr7:150214 | -0.205 | -0.272 | -0.412 | <0.001% |
| chr7_150245_G_A | chr7:150245 | 0.233 | 0.289 | 0.282 | 0.0020% |
| chr7_171678_C_T | chr7:171678 | -0.230 | -0.214 | -0.322 | 0.0026% |
| chr7_149070_A_G | chr7:149070 | 0.140 | 0.041 | 0.406 | <0.001% |
| chr7_120707_G_A | chr7:120707 | 0.175 | 0.211 | 0.400 | 0.0020% |
| chr7_149035_C_T | chr7:149035 | -0.111 | -0.102 | -0.400 | 0.0013% |
| chr7_149294_A_G | chr7:149294 | -0.133 | -0.198 | -0.400 | <0.001% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.