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FGF22

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near FGF22

chr19:539,878..744,373, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr19_556016_C_A	chr19:556016	1.000	1.000	1.000	<0.001%
chr19_556061_A_G	chr19:556061	1.000	1.000	1.000	0.0014%
chr19_556109_C_A	chr19:556109	-0.844	-0.561	-1.000	0.0040%
chr19_556094_G_T	chr19:556094	1.000	0.916	1.000	<0.001%
chr19_556106_C_T	chr19:556106	-0.428	-0.138	-1.000	0.0040%
chr19_556137_G_C	chr19:556137	-0.587	-0.373	-1.000	<0.001%
chr19_556005_G_C	chr19:556005	-0.536	-0.463	-1.000	<0.001%
chr19_556107_G_A	chr19:556107	-0.701	-0.547	-1.000	0.0028%
chr19_550217_C_T	chr19:550217	-0.564	-0.185	-1.000	0.0026%
chr19_550221_G_T	chr19:550221	0.651	0.241	0.801	<0.001%
chr19_556029_C_T	chr19:556029	-0.626	-0.612	-1.000	0.0027%
chr19_556352_G_A	chr19:556352	0.070	0.247	1.000	0.040%
chr19_550217_C_A	chr19:550217	-0.545	-0.173	-1.000	0.0053%
chr19_550228_C_T	chr19:550228	-0.519	-0.165	-1.000	<0.001%
chr19_550223_G_T	chr19:550223	-0.502	-0.160	-1.000	0.013%
chr19_550223_G_A	chr19:550223	-0.505	-0.158	-0.985	0.0033%
chr19_556136_C_T	chr19:556136	-0.333	0.001	-0.976	0.0026%
chr19_556137_G_T	chr19:556137	-0.387	-0.063	-0.924	<0.001%
chr19_550233_T_G	chr19:550233	-0.427	-0.149	-0.891	<0.001%
chr19_556041_G_A	chr19:556041	0.488	0.447	0.771	0.0013%
chr19_556094_G_A	chr19:556094	0.488	0.447	0.524	<0.001%
chr19_550231_C_T	chr19:550231	0.473	0.162	0.554	0.0099%
chr19_556060_G_T	chr19:556060	-0.433	-0.971	-0.806	0.0014%
chr19_556008_C_G	chr19:556008	0.418	0.546	0.782	<0.001%
chr19_556038_G_A	chr19:556038	-0.428	-0.377	-0.747	<0.001%
chr19_555994_C_A	chr19:555994	-0.426	-0.636	-0.435	0.0046%
chr19_556048_C_T	chr19:556048	-0.417	-0.374	-0.729	<0.001%
chr19_556010_A_G	chr19:556010	0.329	0.345	0.688	0.200%
chr19_556286_C_T	chr19:556286	-0.300	-0.287	-0.671	<0.001%
chr19_556058_G_C	chr19:556058	-0.342	-0.437	-0.553	<0.001%
chr19_556133_G_A	chr19:556133	0.339	0.643	0.294	<0.001%
chr19_556207_G_T	chr19:556207	0.326	0.217	0.194	0.0020%
chr19_550229_G_A	chr19:550229	0.312	0.105	0.451	0.0053%
chr19_556142_T_C	chr19:556142	-0.065	-0.070	-0.547	0.0092%
chr19_550239_A_G	chr19:550239	-0.274	-0.091	-0.544	<0.001%
chr19_550281_G_A	chr19:550281	0.307	0.039	0.360	0.0020%
chr19_556328_G_C	chr19:556328	0.003	0.037	0.541	<0.001%
chr19_556137_G_A	chr19:556137	-0.205	-0.628	-0.535	<0.001%
chr19_555937_A_G	chr19:555937	-0.225	-0.270	-0.518	0.0020%
chr19_556352_G_T	chr19:556352	0.245	0.204	0.518	<0.001%
chr19_555881_C_T	chr19:555881	-0.071	-0.190	-0.506	0.0092%
chr19_555905_A_C	chr19:555905	0.194	0.207	0.488	<0.001%
chr19_555891_C_T	chr19:555891	0.025	0.091	0.482	<0.001%
chr19_555883_C_T	chr19:555883	0.038	0.090	0.459	<0.001%
chr19_556182_C_G	chr19:556182	-0.080	0.009	-0.435	<0.001%
chr19_550280_G_T	chr19:550280	0.242	0.032	0.316	0.0020%
chr19_556099_G_A	chr19:556099	-0.241	-0.174	-0.335	0.0020%
chr19_556202_G_A	chr19:556202	0.087	0.077	0.418	0.027%
chr19_555971_C_T	chr19:555971	0.230	0.299	0.247	<0.001%
chr19_556005_G_A	chr19:556005	-0.141	-0.137	-0.406	0.185%
chr19_550256_C_G	chr19:550256	-0.216	-0.046	-0.400	<0.001%
chr19_556011_C_T	chr19:556011	-0.223	-0.164	-0.400	<0.001%
chr19_556159_C_A	chr19:556159	0.226	0.226	0.112	0.0013%
chr19_556357_A_G	chr19:556357	-0.161	-0.143	-0.400	0.0013%
chr19_556239_G_C	chr19:556239	-0.225	-0.094	-0.118	<0.001%
chr19_556249_A_G	chr19:556249	0.090	0.044	0.394	<0.001%
chr19_550279_G_A	chr19:550279	0.223	0.031	0.249	0.0013%
chr19_556112_G_A	chr19:556112	-0.214	-0.201	-0.353	18.1%
chr19_555818_G_C	chr19:555818	-0.000	0.081	0.376	0.237%
chr19_556236_G_A	chr19:556236	-0.135	-0.057	-0.365	0.0013%
chr19_556111_C_T	chr19:556111	-0.203	-0.230	-0.218	<0.001%
chr19_556001_C_T	chr19:556001	-0.191	-0.230	-0.324	0.0020%
chr19_555919_C_G	chr19:555919	0.184	0.203	0.294	<0.001%
chr19_555878_T_C	chr19:555878	-0.085	-0.190	-0.324	<0.001%
chr19_550159_C_T	chr19:550159	0.160	0.046	0.321	<0.001%
chr19_556180_C_T	chr19:556180	-0.181	-0.044	-0.141	0.071%
chr19_550212_T_C	chr19:550212	-0.178	-0.065	-0.210	<0.001%
chr19_550280_G_C	chr19:550280	0.177	0.017	0.259	38.5%
chr19_549660_A_C	chr19:549660	0.102	0.055	0.312	—
chr19_555882_G_A	chr19:555882	-0.026	-0.096	-0.312	0.748%
chr19_550260_T_C	chr19:550260	0.138	0.021	0.287	<0.001%
chr19_550161_C_T	chr19:550161	0.126	0.046	0.282	0.052%
chr19_556402_C_T	chr19:556402	0.082	0.071	0.282	0.0013%
chr19_556435_C_A	chr19:556435	-0.020	-0.030	-0.282	<0.001%
chr19_556233_C_G	chr19:556233	-0.158	-0.014	0.018	<0.001%
chr19_556209_G_A	chr19:556209	0.108	0.033	0.276	<0.001%
chr19_556240_G_A	chr19:556240	-0.115	-0.034	-0.276	0.131%
chr19_556327_G_C	chr19:556327	-0.047	-0.070	0.271	<0.001%
chr19_556328_G_A	chr19:556328	-0.017	-0.036	0.271	0.0059%
chr19_556719_C_G	chr19:556719	-0.068	-0.042	-0.271	<0.001%
chr19_556730_A_G	chr19:556730	0.044	0.046	0.271	0.0026%
chr19_556085_G_C	chr19:556085	-0.151	-0.152	-0.124	<0.001%
chr19_556217_G_C	chr19:556217	0.151	0.100	0.253	0.0013%
chr19_556140_C_T	chr19:556140	-0.149	0.117	0.065	<0.001%
chr19_550282_C_A	chr19:550282	0.148	0.019	0.157	<0.001%
chr19_555925_C_G	chr19:555925	0.142	0.117	0.259	<0.001%
chr19_556035_C_T	chr19:556035	-0.087	-0.119	-0.259	0.0017%
chr19_556113_G_T	chr19:556113	-0.127	-0.024	-0.259	<0.001%
chr19_556719_C_T	chr19:556719	-0.052	-0.049	-0.253	0.0053%
chr19_550257_G_A	chr19:550257	0.112	0.027	0.251	0.0020%
chr19_556293_G_A	chr19:556293	-0.103	-0.104	-0.247	0.0020%
chr19_556433_C_T	chr19:556433	-0.008	-0.008	-0.247	0.0020%
chr19_555838_T_A	chr19:555838	-0.048	0.009	0.241	<0.001%
chr19_556287_C_T	chr19:556287	-0.126	-0.183	-0.235	0.0013%
chr19_556640_T_C	chr19:556640	0.047	0.052	0.235	0.0020%
chr19_555956_G_A	chr19:555956	-0.078	-0.079	-0.229	0.0026%
chr19_556324_A_G	chr19:556324	-0.130	-0.074	-0.212	0.0020%
chr19_555856_C_G	chr19:555856	0.005	0.013	0.224	0.0013%
chr19_556185_C_A	chr19:556185	0.047	0.098	-0.224	0.012%
chr19_556292_C_A	chr19:556292	-0.093	-0.085	-0.224	<0.001%
chr19_556733_C_T	chr19:556733	-0.015	-0.053	-0.224	<0.001%
chr19_556766_C_T	chr19:556766	-0.085	-0.161	-0.224	<0.001%
chr19_556079_A_G	chr19:556079	-0.125	-0.098	0.012	<0.001%
chr19_555878_T_A	chr19:555878	-0.072	-0.155	-0.218	<0.001%
chr19_556195_G_A	chr19:556195	-0.037	-0.009	-0.218	0.0046%
chr19_550257_G_C	chr19:550257	0.120	0.020	0.212	0.014%
chr19_556375_C_G	chr19:556375	0.075	0.080	0.212	<0.001%
chr19_556084_G_A	chr19:556084	0.007	0.069	-0.206	<0.001%
chr19_556345_C_G	chr19:556345	0.116	0.119	0.129	0.0020%
chr19_550113_T_C	chr19:550113	0.104	0.062	0.200	0.012%
chr19_556273_C_T	chr19:556273	-0.111	-0.132	-0.106	<0.001%
chr19_550315_G_A	chr19:550315	0.108	0.067	0.076	0.031%
chr19_555943_A_G	chr19:555943	-0.107	-0.086	-0.024	<0.001%
chr19_550249_C_T	chr19:550249	-0.107	-0.011	-0.151	0.0013%
chr19_550025_C_G	chr19:550025	0.076	0.012	0.188	0.0026%
chr19_555973_T_C	chr19:555973	0.002	0.010	-0.188	0.0013%
chr19_556435_C_T	chr19:556435	-0.032	-0.030	-0.188	<0.001%
chr19_550261_C_G	chr19:550261	0.084	0.025	0.185	0.0020%
chr19_550153_G_A	chr19:550153	0.091	0.030	0.179	<0.001%
chr19_549638_G_A	chr19:549638	0.027	0.019	0.176	0.0020%
chr19_550148_C_T	chr19:550148	0.072	0.027	0.176	0.0013%
chr19_555839_C_G	chr19:555839	0.026	0.082	0.176	0.0033%
chr19_555861_G_A	chr19:555861	-0.008	0.036	0.176	<0.001%
chr19_556244_C_T	chr19:556244	-0.077	0.061	-0.176	0.0026%
chr19_550296_G_A	chr19:550296	0.062	-0.009	0.172	0.125%
chr19_549662_A_T	chr19:549662	0.062	0.021	0.171	—
chr19_555861_G_T	chr19:555861	-0.013	0.041	0.171	0.0013%
chr19_556194_C_G	chr19:556194	0.072	0.048	0.171	<0.001%
chr19_556265_G_A	chr19:556265	-0.032	-0.030	-0.171	0.0013%
chr19_556694_G_A	chr19:556694	0.033	0.042	0.171	0.0013%
chr19_555976_C_G	chr19:555976	0.094	0.119	0.059	<0.001%
chr19_555841_C_T	chr19:555841	-0.006	0.055	0.165	0.0053%
chr19_556254_G_A	chr19:556254	-0.072	-0.038	-0.165	0.0013%
chr19_556274_T_G	chr19:556274	-0.045	-0.029	0.165	0.0066%
chr19_556364_C_A	chr19:556364	-0.030	-0.037	-0.165	<0.001%
chr19_549673_T_A	chr19:549673	0.007	-0.006	0.159	—
chr19_556260_G_C	chr19:556260	-0.090	0.022	0.053	<0.001%
chr19_555920_T_C	chr19:555920	0.089	0.061	-0.018	<0.001%
chr19_555949_C_G	chr19:555949	0.088	0.093	0.018	0.0033%
chr19_549594_G_C	chr19:549594	0.007	0.001	0.153	—
chr19_549628_A_C	chr19:549628	0.058	0.007	0.153	—
chr19_549996_C_T	chr19:549996	0.044	0.037	0.153	<0.001%
chr19_550025_C_T	chr19:550025	0.079	0.015	0.153	<0.001%
chr19_555934_A_G	chr19:555934	-0.059	-0.051	-0.153	<0.001%
chr19_556155_G_A	chr19:556155	-0.087	0.066	-0.141	<0.001%
chr19_556226_C_G	chr19:556226	-0.045	-0.072	0.153	0.0033%
chr19_556635_G_A	chr19:556635	0.012	0.047	0.153	<0.001%
chr19_549592_A_C	chr19:549592	-0.019	-0.007	0.147	—
chr19_550022_C_T	chr19:550022	0.051	0.016	0.147	0.0026%
chr19_556191_C_A	chr19:556191	-0.003	-0.018	-0.147	0.0020%
chr19_555903_C_T	chr19:555903	0.082	0.080	0.082	0.0072%
chr19_556141_G_A	chr19:556141	0.082	-0.015	0.012	5.78%
chr19_556269_T_C	chr19:556269	-0.082	-0.082	-0.082	0.015%
chr19_549592_A_T	chr19:549592	-0.024	-0.006	0.141	—
chr19_550177_C_T	chr19:550177	-0.017	0.008	-0.141	<0.001%
chr19_556304_C_A	chr19:556304	-0.065	-0.076	-0.141	<0.001%
chr19_550151_G_A	chr19:550151	0.067	0.014	0.138	<0.001%
chr19_549604_T_C	chr19:549604	0.021	0.002	0.135	—
chr19_549620_G_T	chr19:549620	0.000	0.010	-0.135	—
chr19_549643_G_C	chr19:549643	0.043	0.015	0.135	—
chr19_549662_A_C	chr19:549662	0.055	0.018	0.135	—
chr19_555850_G_T	chr19:555850	-0.041	-0.006	0.135	0.0046%
chr19_555949_C_T	chr19:555949	-0.015	0.000	-0.135	<0.001%
chr19_556720_G_A	chr19:556720	-0.042	-0.001	-0.135	0.0020%
chr19_550177_C_A	chr19:550177	-0.030	0.003	-0.132	<0.001%
chr19_550282_C_T	chr19:550282	0.074	0.024	0.093	<0.001%
chr19_542274_C_T	chr19:542274	-0.001	-0.020	-0.129	<0.001%
chr19_542316_C_G	chr19:542316	0.011	0.015	0.129	0.0020%
chr19_549592_A_G	chr19:549592	-0.033	-0.010	0.129	—
chr19_549616_T_A	chr19:549616	0.061	0.013	0.129	—
chr19_549630_G_C	chr19:549630	-0.002	-0.001	0.129	—
chr19_556301_T_G	chr19:556301	0.073	0.025	0.118	<0.001%
chr19_556305_G_A	chr19:556305	-0.010	0.023	-0.129	0.0080%
chr19_556326_A_G	chr19:556326	-0.058	-0.042	-0.129	0.0040%
chr19_556696_G_A	chr19:556696	-0.043	-0.037	-0.129	<0.001%
chr19_550206_C_T	chr19:550206	0.072	0.027	0.100	<0.001%
chr19_549543_G_A	chr19:549543	0.012	-0.002	-0.124	<0.001%
chr19_549634_A_C	chr19:549634	-0.013	0.008	0.124	—
chr19_549636_T_G	chr19:549636	-0.003	-0.011	0.124	—
chr19_549675_G_A	chr19:549675	-0.007	-0.027	-0.124	—
chr19_555887_T_G	chr19:555887	-0.025	-0.044	0.124	0.0013%
chr19_555904_G_A	chr19:555904	0.070	0.079	0.100	0.013%
chr19_555947_T_C	chr19:555947	0.012	0.044	0.124	0.0026%
chr19_549664_G_T	chr19:549664	0.067	0.044	0.112	—
chr19_549608_C_A	chr19:549608	-0.004	-0.004	-0.118	—
chr19_549623_C_A	chr19:549623	0.032	0.025	0.118	—
chr19_549628_A_T	chr19:549628	0.042	0.007	0.118	—
chr19_549659_C_A	chr19:549659	-0.007	0.000	-0.118	—
chr19_555897_C_T	chr19:555897	0.023	0.003	0.118	<0.001%
chr19_556131_G_A	chr19:556131	-0.067	-0.089	0.006	<0.001%
chr19_556334_C_T	chr19:556334	0.067	0.010	0.082	0.0013%
chr19_556636_A_C	chr19:556636	0.013	0.004	0.118	<0.001%
chr19_556749_A_T	chr19:556749	-0.030	-0.034	-0.118	0.0066%
chr19_550283_G_A	chr19:550283	0.041	0.024	0.113	<0.001%
chr19_555795_C_T	chr19:555795	0.040	0.016	0.112	0.0026%
chr19_556105_A_C	chr19:556105	0.063	0.065	-0.100	0.0028%
chr19_556155_G_T	chr19:556155	-0.016	0.004	0.112	0.028%
chr19_556215_G_C	chr19:556215	0.040	-0.030	0.112	0.0026%
chr19_556264_C_T	chr19:556264	-0.017	-0.046	-0.112	0.0013%
chr19_556694_G_T	chr19:556694	0.027	0.051	0.112	<0.001%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.