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FOXL3-OT1

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near FOXL3-OT1

chr7:191,228..394,422, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr7_197712_C_T	chr7:197712	-1.000	-1.000	-1.000	<0.001%
chr7_194478_A_C	chr7:194478	-1.000	-1.000	-1.000	<0.001%
chr7_197758_C_T	chr7:197758	-1.000	-0.810	-0.776	<0.001%
chr7_197596_G_C	chr7:197596	-1.000	-0.972	-0.988	0.0092%
chr7_197661_G_A	chr7:197661	0.899	0.774	0.612	<0.001%
chr7_191983_G_A	chr7:191983	0.208	0.265	1.000	<0.001%
chr7_197667_G_C	chr7:197667	0.862	0.703	0.588	<0.001%
chr7_197660_G_C	chr7:197660	0.825	0.645	0.506	<0.001%
chr7_197716_C_T	chr7:197716	-0.815	-0.574	-0.553	<0.001%
chr7_194779_A_C	chr7:194779	-0.275	-0.353	-1.000	26.3%
chr7_191979_G_A	chr7:191979	0.198	0.244	1.000	<0.001%
chr7_197743_G_C	chr7:197743	-0.775	-0.536	-0.600	<0.001%
chr7_197618_G_A	chr7:197618	-0.752	-0.586	-0.588	0.215%
chr7_191987_G_A	chr7:191987	0.210	0.154	1.000	0.0018%
chr7_194483_C_A	chr7:194483	-0.715	-0.693	-1.000	0.0027%
chr7_191983_G_T	chr7:191983	0.156	0.221	1.000	0.021%
chr7_197663_C_A	chr7:197663	0.682	0.548	0.424	<0.001%
chr7_197645_C_G	chr7:197645	0.676	0.513	0.447	<0.001%
chr7_194451_G_A	chr7:194451	0.657	0.470	0.682	0.0040%
chr7_197733_C_T	chr7:197733	-0.652	-0.556	-0.518	0.0013%
chr7_191986_G_A	chr7:191986	0.203	0.132	1.000	0.062%
chr7_197650_G_A	chr7:197650	0.616	0.508	0.365	<0.001%
chr7_194418_C_T	chr7:194418	0.607	0.503	0.818	0.0013%
chr7_191982_G_T	chr7:191982	0.099	0.190	1.000	0.011%
chr7_191985_G_C	chr7:191985	0.254	0.063	1.000	0.023%
chr7_197685_G_T	chr7:197685	0.559	0.487	0.506	<0.001%
chr7_195196_G_C	chr7:195196	0.557	0.718	0.812	<0.001%
chr7_194420_G_A	chr7:194420	-0.551	-0.434	-0.653	<0.001%
chr7_191983_G_C	chr7:191983	0.121	0.176	0.965	<0.001%
chr7_197642_C_A	chr7:197642	0.532	0.482	0.259	0.0033%
chr7_191982_G_C	chr7:191982	0.103	0.194	0.935	0.0079%
chr7_197748_G_C	chr7:197748	-0.522	-0.378	-0.294	0.0013%
chr7_193144_A_C	chr7:193144	0.517	0.101	0.237	0.0020%
chr7_197757_C_G	chr7:197757	-0.506	-0.305	-0.365	0.0020%
chr7_194427_C_T	chr7:194427	-0.504	-0.258	-0.129	<0.001%
chr7_197577_T_G	chr7:197577	0.502	0.406	0.376	0.0013%
chr7_197632_A_T	chr7:197632	-0.502	-0.416	-0.353	0.0013%
chr7_191986_G_C	chr7:191986	0.185	0.083	0.862	0.067%
chr7_192188_C_T	chr7:192188	0.213	0.105	0.841	0.0033%
chr7_194443_C_G	chr7:194443	-0.453	-0.345	-0.271	0.0013%
chr7_194777_C_A	chr7:194777	0.241	0.414	0.800	15.2%
chr7_191987_G_T	chr7:191987	0.100	0.083	0.788	0.071%
chr7_197645_C_T	chr7:197645	0.446	0.482	0.459	0.141%
chr7_191985_G_A	chr7:191985	0.097	0.053	0.762	0.0063%
chr7_197656_G_T	chr7:197656	-0.429	-0.353	-0.376	<0.001%
chr7_192560_C_G	chr7:192560	0.425	0.131	0.622	<0.001%
chr7_197620_G_A	chr7:197620	0.423	0.431	0.235	0.028%
chr7_191987_G_C	chr7:191987	0.129	0.086	0.741	0.067%
chr7_192126_C_T	chr7:192126	0.233	0.062	0.738	<0.001%
chr7_197667_G_A	chr7:197667	0.403	0.345	0.353	<0.001%
chr7_192366_G_A	chr7:192366	0.395	0.061	0.672	0.0020%
chr7_193154_G_C	chr7:193154	0.390	0.084	0.279	<0.001%
chr7_194776_C_G	chr7:194776	0.205	0.317	0.671	42.0%
chr7_192287_C_T	chr7:192287	0.251	0.072	0.649	0.022%
chr7_197567_T_C	chr7:197567	0.363	0.340	0.318	<0.001%
chr7_197718_A_G	chr7:197718	-0.363	-0.228	-0.212	<0.001%
chr7_192262_C_T	chr7:192262	0.171	0.106	0.632	<0.001%
chr7_194777_C_G	chr7:194777	0.183	0.251	0.624	0.0080%
chr7_197568_A_G	chr7:197568	-0.349	-0.264	-0.200	<0.001%
chr7_192413_G_C	chr7:192413	0.332	0.035	0.617	<0.001%
chr7_192285_C_T	chr7:192285	0.147	0.089	0.616	0.0026%
chr7_197676_G_T	chr7:197676	-0.339	-0.277	-0.118	<0.001%
chr7_191981_G_T	chr7:191981	0.053	0.103	0.585	0.0012%
chr7_192259_G_T	chr7:192259	0.099	0.070	0.584	<0.001%
chr7_194431_C_T	chr7:194431	0.318	0.322	0.576	0.0020%
chr7_194469_C_T	chr7:194469	0.324	0.315	0.371	<0.001%
chr7_197729_C_A	chr7:197729	-0.323	-0.223	-0.318	0.0013%
chr7_192229_A_C	chr7:192229	-0.030	-0.092	-0.568	<0.001%
chr7_191974_G_C	chr7:191974	0.097	0.100	0.562	0.0096%
chr7_191986_G_T	chr7:191986	0.075	0.050	0.562	0.0018%
chr7_192519_G_A	chr7:192519	0.212	0.078	0.562	0.0013%
chr7_191974_G_A	chr7:191974	0.078	0.062	0.544	0.0087%
chr7_193034_G_A	chr7:193034	0.302	0.066	0.287	<0.001%
chr7_194499_A_G	chr7:194499	-0.301	-0.183	-0.359	<0.001%
chr7_194428_C_T	chr7:194428	0.201	0.485	0.529	<0.001%
chr7_197524_C_G	chr7:197524	0.300	0.266	0.188	0.029%
chr7_192179_T_C	chr7:192179	-0.102	-0.044	-0.524	0.0020%
chr7_197524_C_T	chr7:197524	0.296	0.289	0.188	<0.001%
chr7_197536_G_A	chr7:197536	0.296	0.244	0.035	0.0020%
chr7_193125_C_T	chr7:193125	0.236	0.063	0.512	<0.001%
chr7_192199_C_A	chr7:192199	0.043	0.080	0.512	3.01%
chr7_193108_G_A	chr7:193108	-0.289	-0.069	-0.052	0.0020%
chr7_194438_C_T	chr7:194438	-0.286	-0.231	-0.271	<0.001%
chr7_193051_C_T	chr7:193051	0.034	0.102	0.506	<0.001%
chr7_192298_C_A	chr7:192298	0.067	0.077	0.501	<0.001%
chr7_192235_C_T	chr7:192235	-0.001	0.077	0.497	<0.001%
chr7_192250_G_A	chr7:192250	-0.023	0.094	0.497	<0.001%
chr7_192247_C_T	chr7:192247	0.011	0.059	0.496	<0.001%
chr7_193092_G_A	chr7:193092	0.280	0.113	0.300	0.0020%
chr7_192164_C_T	chr7:192164	0.073	0.073	0.491	0.0020%
chr7_193078_G_A	chr7:193078	0.277	0.086	0.371	<0.001%
chr7_192197_C_T	chr7:192197	0.066	0.063	0.488	0.0033%
chr7_197774_G_A	chr7:197774	0.276	0.239	0.259	0.0013%
chr7_192289_C_A	chr7:192289	0.161	0.052	0.487	26.1%
chr7_192117_G_A	chr7:192117	0.126	0.039	0.485	<0.001%
chr7_192194_C_T	chr7:192194	0.030	0.072	0.485	<0.001%
chr7_192192_G_A	chr7:192192	0.062	0.066	0.479	<0.001%
chr7_197626_C_A	chr7:197626	-0.270	-0.266	-0.247	0.0013%
chr7_192430_G_A	chr7:192430	-0.267	-0.037	-0.179	<0.001%
chr7_191973_G_A	chr7:191973	0.062	0.128	0.459	0.0039%
chr7_197747_G_A	chr7:197747	-0.258	-0.160	-0.165	0.018%
chr7_197768_A_G	chr7:197768	-0.256	-0.165	-0.106	<0.001%
chr7_192434_G_A	chr7:192434	-0.255	-0.015	0.071	<0.001%
chr7_192145_C_A	chr7:192145	-0.023	0.072	0.450	<0.001%
chr7_192185_G_A	chr7:192185	0.067	0.047	0.450	<0.001%
chr7_192122_C_T	chr7:192122	0.022	0.065	0.441	0.023%
chr7_197701_C_G	chr7:197701	0.250	0.206	0.106	<0.001%
chr7_192255_A_G	chr7:192255	0.027	-0.040	-0.438	0.0013%
chr7_191988_G_A	chr7:191988	0.074	-0.006	0.432	<0.001%
chr7_192129_C_A	chr7:192129	-0.003	0.055	0.426	<0.001%
chr7_192200_G_T	chr7:192200	0.015	0.067	0.426	<0.001%
chr7_193128_G_T	chr7:193128	0.002	0.061	0.423	<0.001%
chr7_192730_G_A	chr7:192730	0.235	-0.008	0.142	0.0013%
chr7_193088_G_T	chr7:193088	0.021	0.060	0.408	0.0013%
chr7_192616_C_G	chr7:192616	0.230	-0.037	0.159	<0.001%
chr7_192401_C_G	chr7:192401	0.226	0.210	0.406	0.0020%
chr7_197746_C_T	chr7:197746	0.230	0.147	0.165	0.014%
chr7_193122_C_T	chr7:193122	0.059	0.069	0.404	<0.001%
chr7_192156_C_T	chr7:192156	0.037	0.048	0.400	<0.001%
chr7_197535_T_C	chr7:197535	0.226	0.147	0.176	94.5%
chr7_193100_T_C	chr7:193100	-0.225	-0.070	-0.349	0.0013%
chr7_192139_A_G	chr7:192139	-0.052	-0.044	-0.394	0.0020%
chr7_197776_G_A	chr7:197776	-0.223	-0.244	-0.224	0.0020%
chr7_192308_G_A	chr7:192308	0.071	0.069	0.390	<0.001%
chr7_192240_G_A	chr7:192240	-0.014	0.068	0.382	0.0020%
chr7_192519_G_T	chr7:192519	0.195	0.066	0.380	<0.001%
chr7_192248_G_A	chr7:192248	0.011	0.065	0.378	0.0066%
chr7_192458_C_T	chr7:192458	0.213	0.129	0.310	<0.001%
chr7_192426_G_A	chr7:192426	0.211	0.056	0.315	0.199%
chr7_191985_G_T	chr7:191985	0.035	-0.007	0.368	0.018%
chr7_192224_G_A	chr7:192224	0.003	0.058	0.365	<0.001%
chr7_197727_C_T	chr7:197727	-0.206	-0.142	-0.129	0.0066%
chr7_197762_A_G	chr7:197762	-0.206	-0.096	-0.071	0.0059%
chr7_194486_C_T	chr7:194486	-0.205	-0.223	-0.129	0.0013%
chr7_192273_G_A	chr7:192273	0.000	0.049	0.360	<0.001%
chr7_192447_G_C	chr7:192447	0.201	0.041	0.122	<0.001%
chr7_193125_C_A	chr7:193125	0.108	0.054	0.354	<0.001%
chr7_192536_C_T	chr7:192536	-0.009	0.052	0.353	<0.001%
chr7_194344_G_A	chr7:194344	0.200	0.170	0.312	<0.001%
chr7_194385_A_C	chr7:194385	-0.200	-0.135	-0.288	0.0026%
chr7_192165_T_C	chr7:192165	-0.032	-0.041	-0.350	<0.001%
chr7_197743_G_A	chr7:197743	-0.196	-0.129	-0.118	0.0059%
chr7_199997_A_G	chr7:199997	-0.196	-0.151	-0.344	<0.001%
chr7_194487_G_A	chr7:194487	-0.116	0.005	-0.341	0.0014%
chr7_194538_G_C	chr7:194538	0.190	0.104	0.153	<0.001%
chr7_193169_G_A	chr7:193169	0.028	0.055	0.334	<0.001%
chr7_193097_C_T	chr7:193097	0.183	0.071	0.331	0.519%
chr7_195054_C_T	chr7:195054	-0.040	-0.135	-0.329	<0.001%
chr7_192121_C_T	chr7:192121	-0.020	0.062	0.326	<0.001%
chr7_193119_C_T	chr7:193119	0.105	0.044	0.324	0.0013%
chr7_194528_A_G	chr7:194528	0.183	0.178	0.147	0.0013%
chr7_197552_G_A	chr7:197552	0.183	0.157	0.082	<0.001%
chr7_197613_A_G	chr7:197613	-0.183	-0.168	-0.094	<0.001%
chr7_197793_C_A	chr7:197793	-0.183	-0.109	-0.129	<0.001%
chr7_192448_G_A	chr7:192448	0.181	0.075	0.201	<0.001%
chr7_194424_C_G	chr7:194424	-0.180	-0.104	0.224	<0.001%
chr7_197558_A_G	chr7:197558	0.180	0.168	0.141	0.0053%
chr7_192546_C_T	chr7:192546	0.063	0.052	0.313	0.0046%
chr7_193088_G_A	chr7:193088	0.002	0.037	0.307	0.035%
chr7_192279_C_T	chr7:192279	0.005	0.063	0.306	<0.001%
chr7_197532_C_T	chr7:197532	-0.173	-0.104	-0.106	<0.001%
chr7_197702_A_G	chr7:197702	0.173	0.190	0.035	<0.001%
chr7_192653_C_T	chr7:192653	0.171	0.041	0.186	<0.001%
chr7_192374_G_A	chr7:192374	0.059	0.015	0.301	0.0013%
chr7_193127_C_T	chr7:193127	0.044	0.045	0.300	0.0040%
chr7_192160_G_A	chr7:192160	0.000	0.046	0.300	0.0092%
chr7_197737_C_G	chr7:197737	-0.168	-0.102	-0.094	<0.001%
chr7_192524_G_A	chr7:192524	-0.167	0.004	0.243	<0.001%
chr7_192127_G_T	chr7:192127	0.007	0.029	0.294	0.0053%
chr7_194376_C_T	chr7:194376	-0.166	-0.206	-0.106	<0.001%
chr7_192486_G_A	chr7:192486	0.108	0.072	0.293	0.0033%
chr7_192180_G_A	chr7:192180	-0.030	0.049	0.291	<0.001%
chr7_192230_G_C	chr7:192230	-0.121	0.035	-0.291	<0.001%
chr7_193164_A_G	chr7:193164	-0.028	-0.046	-0.283	<0.001%
chr7_192114_G_A	chr7:192114	0.047	0.026	0.282	1.41%
chr7_192279_C_A	chr7:192279	0.037	0.051	0.282	0.0046%
chr7_194776_C_A	chr7:194776	0.068	0.099	0.282	0.0047%
chr7_194783_C_T	chr7:194783	0.053	0.015	0.282	0.078%
chr7_192515_A_G	chr7:192515	-0.060	-0.055	-0.282	<0.001%
chr7_192548_G_T	chr7:192548	-0.051	0.015	0.280	0.0013%
chr7_194453_A_G	chr7:194453	-0.158	0.173	-0.112	0.0014%
chr7_192672_C_A	chr7:192672	0.157	0.006	0.157	0.0013%
chr7_194263_G_T	chr7:194263	0.156	0.076	0.147	<0.001%
chr7_193182_G_A	chr7:193182	0.005	0.039	0.275	0.0087%
chr7_197783_G_C	chr7:197783	0.155	0.183	0.141	<0.001%
chr7_192377_G_C	chr7:192377	-0.154	-0.008	-0.070	0.0013%
chr7_192290_C_A	chr7:192290	0.002	0.036	0.272	0.013%
chr7_194383_T_G	chr7:194383	0.153	0.091	0.124	<0.001%
chr7_194407_T_C	chr7:194407	0.068	-0.051	-0.271	0.0020%
chr7_191988_G_C	chr7:191988	0.083	-0.027	0.268	0.017%
chr7_192167_C_A	chr7:192167	0.068	0.016	0.268	<0.001%
chr7_192131_G_A	chr7:192131	-0.003	0.008	0.265	0.0026%
chr7_192424_C_G	chr7:192424	-0.149	-0.022	-0.208	<0.001%
chr7_192460_G_C	chr7:192460	-0.149	-0.016	-0.255	<0.001%
chr7_192136_C_G	chr7:192136	0.094	0.059	0.259	0.0039%
chr7_192289_C_G	chr7:192289	0.146	-0.021	-0.051	<0.001%
chr7_193160_G_A	chr7:193160	0.062	0.051	0.258	0.0027%
chr7_192218_C_T	chr7:192218	0.029	0.038	0.256	0.0020%
chr7_192372_G_A	chr7:192372	-0.143	-0.025	-0.077	0.0020%
chr7_195053_G_T	chr7:195053	-0.085	-0.107	-0.253	<0.001%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.