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GABARAP

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near GABARAP

chr17:7,140,007..7,342,449, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr17_7156527_G_T	chr17:7156527	-1.000	-1.000	-1.000	<0.001%
chr17_7156529_C_T	chr17:7156529	-1.000	-1.000	-1.000	<0.001%
chr17_7156488_C_G	chr17:7156488	1.000	1.000	0.765	<0.001%
chr17_7156544_G_A	chr17:7156544	-1.000	-1.000	-1.000	<0.001%
chr17_7156485_T_G	chr17:7156485	-1.000	-1.000	-1.000	<0.001%
chr17_7156441_C_T	chr17:7156441	-0.984	-1.000	-0.847	<0.001%
chr17_7156445_C_G	chr17:7156445	-0.858	-1.000	-0.871	0.0033%
chr17_7156440_T_A	chr17:7156440	-0.805	-1.000	-0.894	<0.001%
chr17_7156547_C_G	chr17:7156547	-0.794	-1.000	-0.600	<0.001%
chr17_7156504_G_A	chr17:7156504	-0.743	-1.000	-0.682	0.0013%
chr17_7156432_G_A	chr17:7156432	0.676	0.921	0.488	<0.001%
chr17_7156488_C_T	chr17:7156488	-0.639	-0.975	-0.576	<0.001%
chr17_7156497_C_T	chr17:7156497	0.589	0.807	0.465	0.0092%
chr17_7156444_C_T	chr17:7156444	-0.567	-0.919	-0.632	<0.001%
chr17_7156442_C_T	chr17:7156442	-0.557	-0.985	-0.588	0.0026%
chr17_7156481_G_C	chr17:7156481	-0.506	-0.782	-0.500	0.0013%
chr17_7156543_C_T	chr17:7156543	-0.494	-0.452	-0.350	0.0020%
chr17_7156567_G_C	chr17:7156567	0.480	0.574	0.147	0.0013%
chr17_7156479_G_A	chr17:7156479	-0.434	-0.581	-0.394	<0.001%
chr17_7165288_C_G	chr17:7165288	-0.364	-0.202	-0.747	<0.001%
chr17_7165288_C_T	chr17:7165288	-0.371	-0.194	-0.738	0.0039%
chr17_7156549_G_A	chr17:7156549	-0.398	-0.505	-0.335	<0.001%
chr17_7156447_C_T	chr17:7156447	-0.392	-0.477	-0.318	<0.001%
chr17_7165293_T_A	chr17:7165293	-0.369	-0.179	-0.629	<0.001%
chr17_7156647_G_A	chr17:7156647	0.339	0.777	0.529	0.0076%
chr17_7156609_C_G	chr17:7156609	-0.338	-0.373	-0.512	<0.001%
chr17_7156663_G_A	chr17:7156663	0.320	0.761	0.465	0.011%
chr17_7156455_C_T	chr17:7156455	0.309	0.360	0.265	0.0013%
chr17_7165295_T_C	chr17:7165295	-0.282	-0.148	-0.459	<0.001%
chr17_7156456_G_A	chr17:7156456	-0.267	-0.343	-0.276	<0.001%
chr17_7165345_T_C	chr17:7165345	0.217	0.223	0.471	<0.001%
chr17_7156456_G_T	chr17:7156456	-0.251	-0.264	-0.235	<0.001%
chr17_7156465_G_A	chr17:7156465	-0.244	-0.259	-0.271	<0.001%
chr17_7156399_T_C	chr17:7156399	0.238	0.355	0.253	<0.001%
chr17_7156550_G_A	chr17:7156550	-0.225	-0.340	-0.253	<0.001%
chr17_7156623_G_T	chr17:7156623	-0.219	-0.330	-0.168	0.990%
chr17_7156610_G_T	chr17:7156610	-0.208	-0.368	-0.212	0.013%
chr17_7156595_C_G	chr17:7156595	0.204	0.274	0.209	<0.001%
chr17_7156661_G_A	chr17:7156661	0.201	0.566	0.321	0.279%
chr17_7165296_T_C	chr17:7165296	-0.191	-0.095	-0.318	0.0066%
chr17_7156610_G_A	chr17:7156610	-0.186	-0.287	-0.182	0.0020%
chr17_7156400_A_G	chr17:7156400	0.183	0.305	0.200	0.0013%
chr17_7156478_T_G	chr17:7156478	-0.177	-0.264	-0.176	<0.001%
chr17_7148063_C_T	chr17:7148063	0.173	0.168	0.176	<0.001%
chr17_7148069_G_A	chr17:7148069	-0.171	-0.119	-0.274	0.0020%
chr17_7156645_G_A	chr17:7156645	0.171	0.490	0.262	0.047%
chr17_7156627_G_C	chr17:7156627	0.170	0.140	0.185	0.0035%
chr17_7156511_G_T	chr17:7156511	-0.165	-0.102	-0.112	<0.001%
chr17_7148152_C_T	chr17:7148152	0.144	0.254	0.290	0.0020%
chr17_7165344_A_G	chr17:7165344	0.134	0.124	0.288	0.031%
chr17_7156642_A_G	chr17:7156642	-0.162	-0.462	-0.197	0.346%
chr17_7156629_G_A	chr17:7156629	0.136	0.467	0.265	0.0023%
chr17_7156425_A_G	chr17:7156425	0.152	0.165	0.206	<0.001%
chr17_7156651_A_G	chr17:7156651	0.131	0.096	-0.015	0.029%
chr17_7165065_C_A	chr17:7165065	-0.092	-0.063	-0.229	<0.001%
chr17_7156639_G_T	chr17:7156639	-0.084	-0.381	-0.200	0.021%
chr17_7148041_C_G	chr17:7148041	0.066	0.069	0.218	<0.001%
chr17_7156658_A_G	chr17:7156658	-0.123	-0.299	-0.088	0.0058%
chr17_7165284_C_G	chr17:7165284	-0.123	-0.052	-0.100	0.0033%
chr17_7165191_C_T	chr17:7165191	0.118	0.056	0.200	0.0020%
chr17_7165318_A_T	chr17:7165318	-0.116	-0.058	-0.200	<0.001%
chr17_7148068_C_T	chr17:7148068	-0.113	-0.081	-0.154	0.0066%
chr17_7156610_G_C	chr17:7156610	-0.112	-0.183	-0.103	0.061%
chr17_7156613_G_T	chr17:7156613	-0.110	-0.231	-0.038	<0.001%
chr17_7156614_G_C	chr17:7156614	-0.106	-0.091	0.138	<0.001%
chr17_7148073_C_T	chr17:7148073	-0.106	-0.126	-0.157	<0.001%
chr17_7165190_C_G	chr17:7165190	0.091	0.010	0.182	<0.001%
chr17_7165260_T_G	chr17:7165260	-0.103	-0.028	0.000	<0.001%
chr17_7165339_A_G	chr17:7165339	0.049	0.046	0.176	0.0039%
chr17_7156374_T_C	chr17:7156374	0.099	0.190	0.071	<0.001%
chr17_7147956_G_A	chr17:7147956	0.006	0.062	-0.174	28.2%
chr17_7171765_T_G	chr17:7171765	0.047	0.053	0.174	—
chr17_7171789_G_C	chr17:7171789	0.068	0.099	0.171	—
chr17_7148018_C_T	chr17:7148018	-0.051	0.015	-0.169	<0.001%
chr17_7148022_A_G	chr17:7148022	0.078	0.110	0.166	0.0013%
chr17_7165139_G_A	chr17:7165139	-0.052	-0.076	-0.165	<0.001%
chr17_7171696_G_A	chr17:7171696	0.086	0.190	0.165	<0.001%
chr17_7148014_G_T	chr17:7148014	0.093	0.180	0.119	<0.001%
chr17_7171786_G_C	chr17:7171786	0.050	0.063	0.162	—
chr17_7156614_G_A	chr17:7156614	-0.086	-0.178	0.015	0.0020%
chr17_7156673_A_G	chr17:7156673	0.017	-0.066	-0.147	6.32%
chr17_7171746_C_G	chr17:7171746	0.040	0.020	0.138	—
chr17_7156601_C_G	chr17:7156601	0.077	0.063	0.012	0.0013%
chr17_7165145_A_G	chr17:7165145	-0.067	-0.061	-0.135	0.0026%
chr17_7171764_T_G	chr17:7171764	0.022	0.022	0.132	—
chr17_7171819_A_C	chr17:7171819	0.061	0.152	0.132	—
chr17_7156615_G_T	chr17:7156615	0.062	0.056	0.129	0.0094%
chr17_7165258_G_T	chr17:7165258	-0.021	-0.022	-0.129	<0.001%
chr17_7171766_T_G	chr17:7171766	0.027	0.013	0.129	—
chr17_7171796_C_A	chr17:7171796	0.058	0.086	0.129	—
chr17_7175351_C_T	chr17:7175351	0.027	0.008	0.129	—
chr17_7175367_T_C	chr17:7175367	-0.015	-0.020	-0.129	—
chr17_7171704_C_G	chr17:7171704	0.034	0.066	0.126	—
chr17_7171745_C_G	chr17:7171745	0.048	0.028	0.126	—
chr17_7171764_T_C	chr17:7171764	0.024	0.011	0.126	—
chr17_7171765_T_A	chr17:7171765	0.045	0.033	0.126	—
chr17_7175347_C_G	chr17:7175347	0.025	0.010	0.124	—
chr17_7175362_C_G	chr17:7175362	0.045	0.011	0.124	—
chr17_7156415_G_A	chr17:7156415	-0.069	-0.127	-0.071	0.589%
chr17_7171765_T_C	chr17:7171765	0.032	0.015	0.121	—
chr17_7171767_T_G	chr17:7171767	0.025	0.013	0.121	—
chr17_7156395_C_T	chr17:7156395	-0.067	-0.030	-0.047	0.0013%
chr17_7171748_C_G	chr17:7171748	0.025	0.019	0.118	<0.001%
chr17_7171780_A_C	chr17:7171780	0.021	-0.014	0.118	—
chr17_7175349_C_T	chr17:7175349	0.032	0.015	0.118	—
chr17_7156641_A_G	chr17:7156641	0.066	-0.056	-0.085	12.3%
chr17_7156657_A_G	chr17:7156657	0.065	0.056	-0.065	0.323%
chr17_7171742_C_G	chr17:7171742	0.022	0.003	0.115	—
chr17_7171763_T_G	chr17:7171763	0.013	0.020	0.115	—
chr17_7171773_T_G	chr17:7171773	0.037	0.008	0.115	—
chr17_7171793_C_G	chr17:7171793	0.053	0.067	0.115	—
chr17_7171810_T_G	chr17:7171810	0.049	0.138	0.115	—
chr17_7165228_C_T	chr17:7165228	0.064	0.025	0.024	<0.001%
chr17_7148029_G_A	chr17:7148029	-0.063	-0.033	-0.109	0.0039%
chr17_7156667_A_G	chr17:7156667	0.063	-0.015	-0.059	0.236%
chr17_7171717_C_G	chr17:7171717	0.042	0.036	0.112	<0.001%
chr17_7171749_C_G	chr17:7171749	0.031	0.000	0.112	—
chr17_7171776_T_G	chr17:7171776	0.016	-0.019	0.112	—
chr17_7171782_A_C	chr17:7171782	0.021	0.003	0.112	—
chr17_7171784_A_C	chr17:7171784	0.033	0.008	0.112	—
chr17_7175257_T_C	chr17:7175257	-0.028	-0.013	-0.112	—
chr17_7175347_C_T	chr17:7175347	0.025	0.010	0.112	0.0021%
chr17_7175349_C_G	chr17:7175349	0.030	0.013	0.112	<0.001%
chr17_7175353_C_T	chr17:7175353	0.027	0.008	0.112	0.0013%
chr17_7156613_G_A	chr17:7156613	-0.045	-0.190	0.041	0.0020%
chr17_7171708_C_G	chr17:7171708	0.057	0.063	0.109	—
chr17_7171766_T_C	chr17:7171766	0.023	0.001	0.109	—
chr17_7165125_G_A	chr17:7165125	-0.007	-0.010	-0.106	<0.001%
chr17_7165381_C_A	chr17:7165381	-0.031	-0.023	-0.106	<0.001%
chr17_7171742_C_A	chr17:7171742	0.022	0.018	0.106	—
chr17_7171766_T_A	chr17:7171766	0.033	0.009	0.106	—
chr17_7171774_T_C	chr17:7171774	0.018	-0.001	0.106	—
chr17_7171774_T_G	chr17:7171774	0.023	-0.001	0.106	—
chr17_7175349_C_A	chr17:7175349	0.030	0.013	0.106	0.0013%
chr17_7175350_A_G	chr17:7175350	0.007	0.015	0.106	—
chr17_7175350_A_T	chr17:7175350	0.022	0.015	0.106	—
chr17_7175351_C_G	chr17:7175351	0.023	0.008	0.106	—
chr17_7148025_C_T	chr17:7148025	-0.059	-0.074	-0.066	<0.001%
chr17_7156555_T_G	chr17:7156555	0.025	0.180	0.050	0.0013%
chr17_7171704_C_A	chr17:7171704	0.046	0.048	0.103	—
chr17_7171745_C_A	chr17:7171745	0.045	0.041	0.103	<0.001%
chr17_7171754_C_G	chr17:7171754	0.012	-0.004	0.103	—
chr17_7171768_T_C	chr17:7171768	0.015	-0.005	0.103	—
chr17_7171776_T_A	chr17:7171776	0.020	-0.009	0.103	—
chr17_7171696_G_T	chr17:7171696	0.057	0.066	0.074	—
chr17_7165090_G_A	chr17:7165090	-0.012	-0.003	-0.100	0.017%
chr17_7171695_A_C	chr17:7171695	0.046	0.030	0.100	—
chr17_7171744_A_T	chr17:7171744	0.030	0.013	0.100	—
chr17_7171810_T_A	chr17:7171810	0.052	0.151	0.100	—
chr17_7175253_A_C	chr17:7175253	-0.017	-0.013	-0.100	—
chr17_7175347_C_A	chr17:7175347	0.020	0.008	0.100	—
chr17_7175348_A_G	chr17:7175348	0.008	0.008	0.100	—
chr17_7175351_C_A	chr17:7175351	0.020	0.008	0.100	—
chr17_7171743_C_A	chr17:7171743	0.030	0.025	0.097	—
chr17_7171760_A_C	chr17:7171760	0.009	-0.008	0.097	—
chr17_7171763_T_C	chr17:7171763	0.012	0.020	0.097	—
chr17_7171767_T_A	chr17:7171767	0.024	0.003	0.097	—
chr17_7171772_T_G	chr17:7171772	0.017	-0.003	0.097	—
chr17_7171775_T_G	chr17:7171775	0.015	0.008	0.097	—
chr17_7165239_G_T	chr17:7165239	0.054	0.048	0.024	<0.001%
chr17_7171746_C_A	chr17:7171746	0.042	0.033	0.094	—
chr17_7171777_A_C	chr17:7171777	0.011	-0.014	0.094	—
chr17_7175261_A_G	chr17:7175261	-0.002	0.005	0.094	—
chr17_7175263_A_G	chr17:7175263	-0.003	0.003	0.094	<0.001%
chr17_7175353_C_G	chr17:7175353	0.020	0.005	0.094	—
chr17_7175355_C_G	chr17:7175355	0.005	0.003	0.094	—
chr17_7171703_T_A	chr17:7171703	0.046	0.043	0.091	—
chr17_7171708_C_A	chr17:7171708	0.043	0.056	0.091	<0.001%
chr17_7171714_C_G	chr17:7171714	0.030	0.041	0.091	—
chr17_7171762_T_G	chr17:7171762	0.010	0.010	0.091	—
chr17_7171767_T_C	chr17:7171767	0.015	-0.003	0.091	—
chr17_7171771_A_C	chr17:7171771	0.009	-0.006	0.091	—
chr17_7171786_G_T	chr17:7171786	0.028	0.022	0.091	—
chr17_7171693_C_T	chr17:7171693	0.043	0.036	0.088	—
chr17_7171716_T_G	chr17:7171716	0.030	0.018	0.088	—
chr17_7171741_C_G	chr17:7171741	0.032	0.018	0.088	—
chr17_7171761_A_G	chr17:7171761	0.009	0.010	0.088	—
chr17_7171764_T_A	chr17:7171764	0.021	0.009	0.088	—
chr17_7171775_T_C	chr17:7171775	0.012	0.000	0.088	—
chr17_7171820_C_A	chr17:7171820	-0.024	-0.096	-0.088	—
chr17_7171828_C_T	chr17:7171828	-0.018	-0.084	-0.088	—
chr17_7175258_C_G	chr17:7175258	0.015	0.003	0.088	—
chr17_7175289_C_A	chr17:7175289	-0.022	-0.005	-0.088	—
chr17_7175364_C_G	chr17:7175364	0.018	0.004	0.088	—
chr17_7148078_C_T	chr17:7148078	-0.050	-0.038	-0.079	<0.001%
chr17_7147930_T_G	chr17:7147930	-0.002	-0.004	0.085	<0.001%
chr17_7165337_C_T	chr17:7165337	-0.048	-0.046	-0.076	<0.001%
chr17_7171702_C_A	chr17:7171702	0.042	0.043	0.085	—
chr17_7171724_G_A	chr17:7171724	-0.022	0.008	-0.085	0.0047%
chr17_7171747_A_G	chr17:7171747	0.004	-0.008	0.085	—
chr17_7171759_T_G	chr17:7171759	0.010	-0.015	0.085	—
chr17_7171762_T_C	chr17:7171762	0.009	0.015	0.085	0.0092%
chr17_7171768_T_G	chr17:7171768	0.016	0.001	0.085	—
chr17_7171772_T_C	chr17:7171772	0.012	0.000	0.085	—
chr17_7171779_T_C	chr17:7171779	0.006	-0.003	0.085	—
chr17_7171792_T_A	chr17:7171792	0.032	-0.006	0.085	—
chr17_7171820_C_T	chr17:7171820	-0.017	-0.094	-0.085	<0.001%
chr17_7156554_G_C	chr17:7156554	-0.047	-0.081	-0.071	0.0026%
chr17_7165319_C_T	chr17:7165319	-0.047	-0.036	-0.053	0.0033%
chr17_7147929_G_C	chr17:7147929	0.022	0.016	0.082	0.337%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.