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GALNT9
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near GALNT9
chr12:132,096,371..132,429,589, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr12_132398316_C_A | chr12:132398316 | 6,688 | 3,728 | 5,760 | — |
| chr12_132181915_G_T | chr12:132181915 | 4,048 | 1,456 | 12,032 | — |
| chr12_132181814_G_T | chr12:132181814 | 2,992 | -64 | -1,856 | — |
| chr12_132181886_C_T | chr12:132181886 | 2,672 | 1,168 | 10,304 | 4.4e-5 |
| chr12_132181890_C_T | chr12:132181890 | 2,496 | 1,152 | 9,984 | 8.3e-4 |
| chr12_132398287_C_T | chr12:132398287 | 2,464 | 1,632 | 3,072 | — |
| chr12_132398279_T_C | chr12:132398279 | 2,144 | 2,112 | 3,456 | — |
| chr12_132325639_C_A | chr12:132325639 | 2,112 | 128 | 5,120 | — |
| chr12_132181890_C_A | chr12:132181890 | 2,048 | 1,008 | 8,768 | 2.2e-5 |
| chr12_132181887_C_T | chr12:132181887 | 1,984 | 496 | 6,400 | 2.2e-5 |
| chr12_132181853_T_A | chr12:132181853 | 1,952 | 72 | -576 | — |
| chr12_132325642_T_G | chr12:132325642 | 1,920 | -192 | 4,352 | — |
| chr12_132181890_C_G | chr12:132181890 | 1,888 | 888 | 8,448 | 6.5e-5 |
| chr12_132181886_C_A | chr12:132181886 | 1,872 | 880 | 7,936 | 1.6e-2 |
| chr12_132181920_C_G | chr12:132181920 | 1,808 | 680 | 5,184 | — |
| chr12_132181886_C_G | chr12:132181886 | 1,776 | 872 | 7,936 | 2.2e-5 |
| chr12_132181894_C_T | chr12:132181894 | 1,760 | 912 | 7,552 | 1.5e-5 |
| chr12_132181891_C_T | chr12:132181891 | 1,712 | 456 | 5,504 | 3.7e-5 |
| chr12_132181885_C_T | chr12:132181885 | 1,664 | 264 | 5,312 | 5.3e-5 |
| chr12_132398304_C_A | chr12:132398304 | 1,664 | 1,008 | 1,152 | — |
| chr12_132181894_C_A | chr12:132181894 | 1,600 | 952 | 7,424 | 2.0e-4 |
| chr12_132181882_C_T | chr12:132181882 | 1,600 | 912 | 7,104 | 2.5e-5 |
| chr12_132181894_C_G | chr12:132181894 | 1,600 | 800 | 6,528 | 8.1e-5 |
| chr12_132181888_C_T | chr12:132181888 | 1,600 | 168 | 4,416 | 6.6e-5 |
| chr12_132181882_C_G | chr12:132181882 | 1,568 | 928 | 7,040 | 7.4e-5 |
| chr12_132398292_G_C | chr12:132398292 | -1,504 | -960 | -1,536 | — |
| chr12_132398296_T_A | chr12:132398296 | 1,472 | 1,440 | 1,920 | — |
| chr12_132181882_C_A | chr12:132181882 | 1,408 | 904 | 6,912 | 6.9e-4 |
| chr12_132398278_C_G | chr12:132398278 | 1,280 | 1,120 | 2,048 | 1.3e-5 |
| chr12_132398292_G_T | chr12:132398292 | -1,280 | -480 | -1,536 | — |
| chr12_132181892_C_T | chr12:132181892 | 1,248 | 288 | 4,032 | — |
| chr12_132181912_T_A | chr12:132181912 | 1,216 | 304 | 1,664 | — |
| chr12_132181871_A_C | chr12:132181871 | 1,120 | 344 | 2,432 | — |
| chr12_132398295_T_A | chr12:132398295 | -1,120 | -976 | -1,280 | — |
| chr12_132181900_T_G | chr12:132181900 | 1,056 | 624 | 5,632 | — |
| chr12_132325667_A_C | chr12:132325667 | -1,056 | -416 | -2,688 | — |
| chr12_132181884_C_T | chr12:132181884 | 1,056 | -264 | 2,048 | 7.9e-5 |
| chr12_132181865_T_A | chr12:132181865 | -1,040 | -40 | -64 | — |
| chr12_132181883_C_T | chr12:132181883 | 960 | 232 | 3,712 | — |
| chr12_132325639_C_G | chr12:132325639 | 928 | 48 | 1,792 | — |
| chr12_132398280_C_G | chr12:132398280 | 928 | 752 | 1,792 | — |
| chr12_132398284_T_C | chr12:132398284 | 928 | 928 | 1,664 | — |
| chr12_132398279_T_A | chr12:132398279 | 896 | 896 | 1,408 | — |
| chr12_132181895_C_A | chr12:132181895 | 880 | 552 | 4,608 | 7.4e-6 |
| chr12_132181893_C_T | chr12:132181893 | 880 | 104 | 2,752 | 7.1e-6 |
| chr12_132398286_G_T | chr12:132398286 | -832 | -160 | -1,152 | — |
| chr12_132325644_G_C | chr12:132325644 | 832 | -160 | 1,024 | — |
| chr12_132181889_C_T | chr12:132181889 | 800 | -184 | 1,984 | — |
| chr12_132398289_C_G | chr12:132398289 | 800 | 464 | 1,280 | — |
| chr12_132325713_C_G | chr12:132325713 | 768 | 144 | 1,280 | — |
| chr12_132181898_A_G | chr12:132181898 | 752 | 464 | 4,032 | — |
| chr12_132181881_C_T | chr12:132181881 | 736 | 512 | 4,160 | — |
| chr12_132181895_C_T | chr12:132181895 | 720 | 392 | 3,584 | — |
| chr12_132181895_C_G | chr12:132181895 | 720 | 376 | 3,392 | 5.9e-5 |
| chr12_132181891_C_A | chr12:132181891 | 720 | -192 | 1,664 | 3.0e-5 |
| chr12_132181881_C_A | chr12:132181881 | 704 | 688 | 4,480 | 1.1e-2 |
| chr12_132181904_G_T | chr12:132181904 | -704 | -264 | -2,688 | — |
| chr12_132325627_C_A | chr12:132325627 | 704 | -192 | 2,176 | — |
| chr12_132398276_T_G | chr12:132398276 | 672 | 80 | 1,536 | — |
| chr12_132181924_G_C | chr12:132181924 | -656 | -136 | -3,840 | — |
| chr12_132181795_A_G | chr12:132181795 | -656 | -72 | -1,600 | — |
| chr12_132181891_C_G | chr12:132181891 | 624 | -296 | 1,088 | 5.7e-4 |
| chr12_132398314_G_T | chr12:132398314 | -608 | -1,152 | -640 | — |
| chr12_132398314_G_C | chr12:132398314 | -608 | -1,088 | 256 | — |
| chr12_132398291_T_A | chr12:132398291 | -576 | -384 | -1,280 | — |
| chr12_132325625_A_G | chr12:132325625 | 576 | 32 | 1,024 | — |
| chr12_132398269_A_C | chr12:132398269 | -544 | -384 | -1,920 | — |
| chr12_132325632_G_C | chr12:132325632 | -544 | 0 | -1,536 | — |
| chr12_132181909_G_C | chr12:132181909 | -528 | -472 | -2,496 | — |
| chr12_132181879_T_C | chr12:132181879 | -512 | -152 | -1,856 | 8.9e-2 |
| chr12_132181907_G_C | chr12:132181907 | -512 | -248 | -1,728 | — |
| chr12_132325651_C_T | chr12:132325651 | -512 | -32 | -1,024 | — |
| chr12_132181925_C_T | chr12:132181925 | -496 | -256 | -1,664 | — |
| chr12_132181902_A_G | chr12:132181902 | 480 | 416 | 4,032 | — |
| chr12_132181889_C_A | chr12:132181889 | -480 | -888 | -2,688 | 3.6e-4 |
| chr12_132398264_C_G | chr12:132398264 | 480 | 112 | 1,152 | — |
| chr12_132181881_C_G | chr12:132181881 | 464 | 632 | 4,800 | — |
| chr12_132181917_C_G | chr12:132181917 | 464 | 144 | 1,088 | — |
| chr12_132181880_C_A | chr12:132181880 | 448 | 248 | 2,688 | — |
| chr12_132398318_T_G | chr12:132398318 | 448 | -960 | 1,408 | — |
| chr12_132325640_G_T | chr12:132325640 | -448 | -144 | -1,152 | — |
| chr12_132325660_G_C | chr12:132325660 | -448 | -64 | -1,024 | — |
| chr12_132181811_T_C | chr12:132181811 | 432 | 248 | 1,792 | — |
| chr12_132181793_T_G | chr12:132181793 | -432 | -56 | -1,472 | — |
| chr12_132398313_T_C | chr12:132398313 | 416 | -32 | 1,536 | — |
| chr12_132398262_T_G | chr12:132398262 | 416 | 192 | 1,280 | — |
| chr12_132181903_T_G | chr12:132181903 | 400 | 328 | 3,712 | — |
| chr12_132181908_C_G | chr12:132181908 | 400 | 88 | 2,816 | — |
| chr12_132181889_C_G | chr12:132181889 | -400 | -864 | -2,240 | 2.2e-4 |
| chr12_132181913_C_G | chr12:132181913 | 400 | 120 | 1,024 | — |
| chr12_132398277_T_C | chr12:132398277 | 384 | 288 | 2,304 | 2.0e-5 |
| chr12_132181907_G_A | chr12:132181907 | -384 | -176 | -1,536 | 7.0e-6 |
| chr12_132398266_G_T | chr12:132398266 | -384 | -272 | -1,408 | — |
| chr12_132181848_C_T | chr12:132181848 | 384 | -32 | 1,280 | 5.2e-4 |
| chr12_132325646_C_A | chr12:132325646 | -384 | 0 | -1,280 | — |
| chr12_132325663_G_A | chr12:132325663 | 384 | 96 | -1,280 | 2.6e-4 |
| chr12_132181844_G_C | chr12:132181844 | -352 | -88 | -2,176 | — |
| chr12_132325699_T_G | chr12:132325699 | -352 | -96 | 1,664 | — |
| chr12_132398265_A_C | chr12:132398265 | 352 | -416 | -1,664 | — |
| chr12_132181808_A_G | chr12:132181808 | 352 | 264 | 1,344 | — |
| chr12_132181834_T_C | chr12:132181834 | 352 | -80 | -1,280 | — |
| chr12_132325658_C_A | chr12:132325658 | 352 | 256 | 1,280 | — |
| chr12_132325640_G_C | chr12:132325640 | -352 | -112 | -1,152 | — |
| chr12_132325651_C_A | chr12:132325651 | -352 | -16 | -1,024 | — |
| chr12_132181811_T_A | chr12:132181811 | 336 | 128 | 1,408 | — |
| chr12_132325672_G_C | chr12:132325672 | -320 | -96 | -2,048 | — |
| chr12_132181920_C_T | chr12:132181920 | 320 | 208 | 1,664 | — |
| chr12_132325615_G_T | chr12:132325615 | 320 | 48 | 1,664 | — |
| chr12_132398315_G_A | chr12:132398315 | 320 | 1,600 | -384 | — |
| chr12_132398263_A_G | chr12:132398263 | 320 | 80 | 1,408 | — |
| chr12_132181831_A_T | chr12:132181831 | 320 | 16 | -1,344 | 7.6e-6 |
| chr12_132398279_T_G | chr12:132398279 | 320 | 304 | 1,280 | — |
| chr12_132325670_C_A | chr12:132325670 | 320 | 256 | 1,152 | — |
| chr12_132181800_A_T | chr12:132181800 | -320 | -48 | -1,088 | — |
| chr12_132181907_G_T | chr12:132181907 | -304 | -112 | -1,344 | — |
| chr12_132181884_C_G | chr12:132181884 | -288 | -800 | -2,432 | — |
| chr12_132181912_T_C | chr12:132181912 | 288 | -208 | -1,344 | — |
| chr12_132325655_G_A | chr12:132325655 | 288 | 96 | -1,280 | 6.6e-6 |
| chr12_132398282_T_G | chr12:132398282 | 288 | 288 | 1,280 | — |
| chr12_132325635_A_C | chr12:132325635 | -288 | -208 | -1,152 | — |
| chr12_132325658_C_G | chr12:132325658 | 288 | 64 | 1,024 | — |
| chr12_132181906_G_C | chr12:132181906 | -272 | -240 | -2,112 | — |
| chr12_132181900_T_A | chr12:132181900 | 272 | 160 | 1,536 | — |
| chr12_132181870_A_G | chr12:132181870 | 272 | 96 | 1,280 | 8.0e-6 |
| chr12_132181862_C_A | chr12:132181862 | 272 | -160 | -1,216 | — |
| chr12_132181827_T_G | chr12:132181827 | 256 | 80 | 1,856 | — |
| chr12_132398272_G_C | chr12:132398272 | 256 | 112 | 1,536 | — |
| chr12_132181880_C_T | chr12:132181880 | 256 | 16 | 1,408 | — |
| chr12_132181831_A_G | chr12:132181831 | 256 | -88 | -1,280 | — |
| chr12_132325739_A_G | chr12:132325739 | -256 | -144 | -1,152 | — |
| chr12_132325656_C_A | chr12:132325656 | 256 | 112 | -1,024 | — |
| chr12_132181906_G_T | chr12:132181906 | -240 | -104 | -2,048 | — |
| chr12_132181843_C_A | chr12:132181843 | 240 | 200 | 1,536 | — |
| chr12_132181867_G_T | chr12:132181867 | -240 | -208 | -1,408 | — |
| chr12_132181858_C_A | chr12:132181858 | -240 | 72 | 1,216 | — |
| chr12_132325662_G_A | chr12:132325662 | 224 | -32 | -2,048 | — |
| chr12_132181910_C_G | chr12:132181910 | 224 | 160 | 1,600 | — |
| chr12_132325662_G_C | chr12:132325662 | 224 | -112 | -1,536 | — |
| chr12_132325669_C_G | chr12:132325669 | 224 | 32 | 1,408 | — |
| chr12_132398316_C_G | chr12:132398316 | -224 | -1,184 | 256 | — |
| chr12_132325670_C_G | chr12:132325670 | 224 | 96 | 1,152 | — |
| chr12_132325621_C_G | chr12:132325621 | 224 | 32 | 1,024 | — |
| chr12_132325669_C_A | chr12:132325669 | 224 | 112 | 1,024 | — |
| chr12_132181847_A_C | chr12:132181847 | -208 | -48 | -2,944 | — |
| chr12_132181927_A_C | chr12:132181927 | -208 | -320 | -2,688 | — |
| chr12_132181858_C_G | chr12:132181858 | -208 | 96 | 1,664 | — |
| chr12_132181923_G_C | chr12:132181923 | -208 | -152 | -1,088 | — |
| chr12_132181905_G_T | chr12:132181905 | -192 | -88 | -1,536 | — |
| chr12_132398317_C_G | chr12:132398317 | 192 | -1,104 | 1,408 | — |
| chr12_132181904_G_A | chr12:132181904 | 192 | -40 | -1,280 | — |
| chr12_132398318_T_A | chr12:132398318 | -192 | -1,216 | 256 | — |
| chr12_132181900_T_C | chr12:132181900 | 192 | 72 | 1,152 | — |
| chr12_132181897_G_C | chr12:132181897 | 176 | 120 | 1,152 | — |
| chr12_132398309_T_G | chr12:132398309 | -160 | -48 | 1,664 | — |
| chr12_132181828_T_G | chr12:132181828 | 160 | 24 | 1,152 | — |
| chr12_132325670_C_T | chr12:132325670 | 160 | 224 | 1,024 | — |
| chr12_132181880_C_G | chr12:132181880 | 144 | 192 | 1,920 | 6.9e-4 |
| chr12_132181899_G_T | chr12:132181899 | 144 | 168 | 1,408 | — |
| chr12_132325718_A_G | chr12:132325718 | -128 | 32 | 1,280 | — |
| chr12_132181809_G_C | chr12:132181809 | -128 | 128 | 1,088 | — |
| chr12_132181906_G_A | chr12:132181906 | -128 | -72 | -1,024 | — |
| chr12_132325640_G_A | chr12:132325640 | -128 | 32 | -1,024 | 6.6e-6 |
| chr12_132181852_G_C | chr12:132181852 | -112 | -96 | -1,280 | — |
| chr12_132181920_C_A | chr12:132181920 | -112 | 128 | 1,280 | — |
| chr12_132181796_G_C | chr12:132181796 | 112 | -56 | -1,152 | — |
| chr12_132181874_C_A | chr12:132181874 | 112 | -8 | 1,088 | — |
| chr12_132181902_A_T | chr12:132181902 | 96 | 136 | 1,792 | — |
| chr12_132181893_C_A | chr12:132181893 | -96 | -728 | -1,728 | — |
| chr12_132181887_C_G | chr12:132181887 | -96 | -728 | -1,536 | 3.0e-5 |
| chr12_132398291_T_G | chr12:132398291 | -96 | -288 | -1,536 | — |
| chr12_132181849_G_C | chr12:132181849 | -96 | 88 | -1,408 | — |
| chr12_132181904_G_C | chr12:132181904 | -96 | -144 | -1,408 | — |
| chr12_132181847_A_G | chr12:132181847 | 96 | -104 | -1,024 | — |
| chr12_132325672_G_T | chr12:132325672 | -96 | 112 | -1,024 | 1.8e-3 |
| chr12_132181884_C_A | chr12:132181884 | -64 | -744 | -1,792 | 1.5e-2 |
| chr12_132325662_G_T | chr12:132325662 | 64 | 0 | -1,536 | — |
| chr12_132325733_T_C | chr12:132325733 | -64 | -272 | 1,536 | — |
| chr12_132398269_A_G | chr12:132398269 | -64 | -288 | -1,408 | — |
| chr12_132325677_A_C | chr12:132325677 | -64 | -160 | -1,280 | — |
| chr12_132325686_G_T | chr12:132325686 | 64 | 32 | -1,280 | — |
| chr12_132325686_G_A | chr12:132325686 | -64 | 48 | -1,152 | — |
| chr12_132181905_G_C | chr12:132181905 | -48 | -232 | -1,792 | — |
| chr12_132181892_C_G | chr12:132181892 | -48 | -624 | -1,472 | — |
| chr12_132181860_G_A | chr12:132181860 | -48 | 56 | 1,408 | — |
| chr12_132181916_A_C | chr12:132181916 | 48 | -104 | -1,088 | — |
| chr12_132181905_G_A | chr12:132181905 | -32 | -256 | -2,368 | — |
| chr12_132181888_C_G | chr12:132181888 | -32 | -792 | -1,728 | 2.2e-4 |
| chr12_132181913_C_T | chr12:132181913 | -32 | 224 | 1,536 | — |
| chr12_132398277_T_G | chr12:132398277 | -32 | 0 | 1,280 | — |
| chr12_132325703_G_A | chr12:132325703 | 32 | -32 | -1,152 | — |
| chr12_132325680_C_T | chr12:132325680 | 32 | 48 | -1,024 | — |
| chr12_132181888_C_A | chr12:132181888 | -16 | -792 | -2,048 | 5.4e-4 |
| chr12_132181838_G_T | chr12:132181838 | 16 | -248 | -1,664 | — |
| chr12_132181887_C_A | chr12:132181887 | 16 | -696 | -1,408 | 3.9e-1 |
| chr12_132181794_G_C | chr12:132181794 | -16 | 64 | 1,216 | — |
| chr12_132181893_C_G | chr12:132181893 | 0 | -552 | -1,664 | — |
| chr12_132325703_G_C | chr12:132325703 | 0 | -96 | -1,280 | — |
| chr12_132181867_G_C | chr12:132181867 | 0 | -232 | -1,152 | — |
| chr12_132325668_C_G | chr12:132325668 | 0 | 32 | 1,152 | — |
| chr12_132325674_T_C | chr12:132325674 | 0 | -272 | -1,152 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.