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GATD1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near GATD1
chr11:667,222..877,487, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr11_679852_A_G | chr11:679852 | 1.000 | 1.000 | 1.000 | — |
| chr11_679690_G_T | chr11:679690 | 1.000 | 1.000 | 1.000 | — |
| chr11_679685_C_G | chr11:679685 | 0.785 | 0.995 | 0.941 | — |
| chr11_679744_G_C | chr11:679744 | 0.677 | 0.739 | 1.000 | — |
| chr11_679860_C_T | chr11:679860 | 0.549 | 0.553 | 0.700 | — |
| chr11_679805_G_C | chr11:679805 | 0.534 | 0.734 | 0.835 | — |
| chr11_679578_C_T | chr11:679578 | 0.521 | 0.797 | 0.929 | — |
| chr11_679810_A_T | chr11:679810 | -0.446 | -0.726 | -0.871 | — |
| chr11_679773_C_A | chr11:679773 | -0.351 | -0.627 | -0.835 | — |
| chr11_679810_A_C | chr11:679810 | -0.370 | -0.614 | -0.747 | — |
| chr11_679703_A_T | chr11:679703 | 0.378 | 0.515 | 0.735 | — |
| chr11_679804_G_C | chr11:679804 | 0.414 | 0.510 | 0.629 | 0.0059% |
| chr11_679806_G_A | chr11:679806 | 0.404 | 0.541 | 0.606 | — |
| chr11_679744_G_A | chr11:679744 | 0.399 | 0.609 | 0.529 | — |
| chr11_679770_G_C | chr11:679770 | -0.367 | -0.627 | -0.700 | — |
| chr11_679876_C_A | chr11:679876 | 0.383 | 0.274 | 0.329 | — |
| chr11_679745_C_T | chr11:679745 | -0.348 | -0.551 | -0.653 | — |
| chr11_679770_G_T | chr11:679770 | -0.339 | -0.563 | -0.653 | — |
| chr11_679805_G_A | chr11:679805 | 0.368 | 0.543 | 0.529 | — |
| chr11_679702_A_C | chr11:679702 | 0.353 | 0.444 | 0.641 | — |
| chr11_679707_G_T | chr11:679707 | 0.361 | 0.543 | 0.594 | — |
| chr11_679806_G_C | chr11:679806 | 0.353 | 0.518 | 0.500 | — |
| chr11_679685_C_A | chr11:679685 | 0.351 | 0.437 | 0.459 | — |
| chr11_679776_T_A | chr11:679776 | -0.341 | -0.454 | -0.612 | — |
| chr11_679779_C_A | chr11:679779 | 0.341 | 0.472 | 0.541 | — |
| chr11_679783_G_C | chr11:679783 | -0.313 | -0.480 | -0.600 | — |
| chr11_679784_A_T | chr11:679784 | -0.329 | -0.520 | -0.600 | — |
| chr11_679773_C_G | chr11:679773 | -0.271 | -0.480 | -0.594 | — |
| chr11_679792_A_G | chr11:679792 | -0.309 | -0.487 | -0.576 | — |
| chr11_679807_G_C | chr11:679807 | -0.324 | -0.505 | -0.547 | — |
| chr11_679785_G_A | chr11:679785 | -0.287 | -0.503 | -0.571 | — |
| chr11_679766_C_A | chr11:679766 | -0.298 | -0.480 | -0.553 | — |
| chr11_679799_C_T | chr11:679799 | -0.250 | -0.345 | -0.547 | — |
| chr11_679706_C_G | chr11:679706 | 0.308 | 0.467 | 0.518 | — |
| chr11_679704_G_C | chr11:679704 | 0.281 | 0.368 | 0.535 | — |
| chr11_679782_C_A | chr11:679782 | 0.298 | 0.449 | 0.447 | — |
| chr11_679683_C_G | chr11:679683 | 0.295 | 0.383 | 0.471 | — |
| chr11_679745_C_G | chr11:679745 | -0.281 | -0.454 | -0.518 | — |
| chr11_679785_G_C | chr11:679785 | -0.255 | -0.452 | -0.512 | — |
| chr11_679789_G_T | chr11:679789 | -0.233 | -0.416 | -0.512 | — |
| chr11_679772_T_A | chr11:679772 | -0.289 | -0.467 | -0.476 | — |
| chr11_679803_G_T | chr11:679803 | 0.288 | 0.398 | 0.400 | — |
| chr11_679810_A_G | chr11:679810 | -0.287 | -0.437 | -0.476 | — |
| chr11_679766_C_G | chr11:679766 | -0.263 | -0.434 | -0.506 | — |
| chr11_679784_A_G | chr11:679784 | -0.258 | -0.371 | -0.506 | — |
| chr11_679778_C_A | chr11:679778 | 0.285 | 0.581 | 0.412 | — |
| chr11_679808_T_C | chr11:679808 | -0.285 | -0.429 | -0.400 | — |
| chr11_679690_G_C | chr11:679690 | 0.283 | 0.429 | 0.429 | — |
| chr11_679768_A_C | chr11:679768 | -0.257 | -0.431 | -0.500 | — |
| chr11_679780_C_G | chr11:679780 | 0.275 | 0.297 | 0.500 | — |
| chr11_679788_C_A | chr11:679788 | -0.246 | -0.437 | -0.500 | — |
| chr11_679788_C_G | chr11:679788 | -0.255 | -0.459 | -0.500 | — |
| chr11_679683_C_T | chr11:679683 | 0.276 | 0.365 | 0.429 | — |
| chr11_679770_G_A | chr11:679770 | -0.274 | -0.464 | -0.471 | — |
| chr11_679703_A_G | chr11:679703 | 0.268 | 0.305 | 0.476 | — |
| chr11_679763_G_C | chr11:679763 | -0.234 | -0.457 | -0.471 | — |
| chr11_679682_G_T | chr11:679682 | -0.178 | -0.246 | -0.465 | — |
| chr11_679793_T_C | chr11:679793 | 0.230 | 0.470 | 0.465 | — |
| chr11_679701_G_C | chr11:679701 | 0.256 | 0.302 | 0.412 | — |
| chr11_679780_C_A | chr11:679780 | 0.250 | 0.228 | 0.441 | — |
| chr11_679892_C_A | chr11:679892 | 0.250 | 0.264 | 0.276 | — |
| chr11_679768_A_G | chr11:679768 | -0.248 | -0.358 | -0.435 | — |
| chr11_679784_A_C | chr11:679784 | -0.248 | -0.404 | -0.394 | — |
| chr11_679771_G_C | chr11:679771 | -0.246 | -0.429 | -0.429 | — |
| chr11_679776_T_C | chr11:679776 | -0.245 | -0.307 | -0.335 | — |
| chr11_679779_C_G | chr11:679779 | 0.245 | 0.315 | 0.429 | — |
| chr11_679862_A_T | chr11:679862 | 0.245 | 0.246 | 0.288 | — |
| chr11_679693_G_A | chr11:679693 | 0.243 | 0.477 | 0.382 | — |
| chr11_679786_G_T | chr11:679786 | -0.200 | -0.371 | -0.429 | — |
| chr11_679748_C_A | chr11:679748 | -0.238 | -0.315 | -0.282 | — |
| chr11_679705_A_C | chr11:679705 | 0.165 | 0.208 | 0.418 | — |
| chr11_679862_A_G | chr11:679862 | 0.236 | 0.218 | 0.318 | — |
| chr11_679772_T_G | chr11:679772 | -0.235 | -0.383 | -0.329 | — |
| chr11_679785_G_T | chr11:679785 | -0.202 | -0.381 | -0.412 | — |
| chr11_679794_C_G | chr11:679794 | -0.231 | -0.335 | -0.412 | — |
| chr11_679702_A_T | chr11:679702 | 0.231 | 0.325 | 0.371 | — |
| chr11_679747_T_C | chr11:679747 | -0.230 | -0.332 | -0.388 | — |
| chr11_679777_G_A | chr11:679777 | -0.196 | -0.343 | -0.406 | — |
| chr11_679790_T_A | chr11:679790 | -0.191 | -0.330 | -0.406 | — |
| chr11_679793_T_A | chr11:679793 | 0.230 | 0.355 | 0.400 | — |
| chr11_679804_G_A | chr11:679804 | 0.230 | 0.312 | 0.371 | — |
| chr11_679818_T_A | chr11:679818 | 0.097 | 0.228 | 0.406 | — |
| chr11_679704_G_T | chr11:679704 | 0.220 | 0.287 | 0.400 | — |
| chr11_679818_T_C | chr11:679818 | 0.116 | 0.226 | 0.400 | <0.001% |
| chr11_679803_G_C | chr11:679803 | 0.223 | 0.292 | 0.312 | — |
| chr11_679870_C_A | chr11:679870 | 0.220 | 0.365 | 0.259 | — |
| chr11_679757_A_T | chr11:679757 | -0.220 | -0.325 | -0.359 | — |
| chr11_679782_C_T | chr11:679782 | 0.220 | 0.332 | 0.353 | 0.0098% |
| chr11_679794_C_T | chr11:679794 | -0.215 | -0.317 | -0.388 | — |
| chr11_679884_C_G | chr11:679884 | 0.219 | 0.246 | 0.235 | — |
| chr11_679759_G_C | chr11:679759 | -0.202 | -0.305 | -0.382 | — |
| chr11_679773_C_T | chr11:679773 | -0.193 | -0.338 | -0.382 | — |
| chr11_679704_G_A | chr11:679704 | 0.195 | 0.274 | 0.376 | — |
| chr11_679742_T_G | chr11:679742 | -0.213 | -0.292 | -0.365 | — |
| chr11_679772_T_C | chr11:679772 | -0.213 | -0.360 | -0.306 | — |
| chr11_679777_G_C | chr11:679777 | -0.201 | -0.332 | -0.376 | — |
| chr11_679766_C_T | chr11:679766 | -0.201 | -0.327 | -0.371 | — |
| chr11_679792_A_T | chr11:679792 | -0.195 | -0.289 | -0.371 | — |
| chr11_679846_C_T | chr11:679846 | -0.131 | -0.170 | -0.371 | — |
| chr11_679807_G_T | chr11:679807 | -0.190 | -0.320 | -0.365 | — |
| chr11_679648_T_G | chr11:679648 | -0.160 | -0.218 | -0.359 | — |
| chr11_679827_A_C | chr11:679827 | 0.141 | 0.231 | 0.359 | — |
| chr11_679841_C_A | chr11:679841 | 0.203 | 0.254 | 0.271 | — |
| chr11_679847_C_G | chr11:679847 | -0.200 | -0.272 | -0.359 | — |
| chr11_679779_C_T | chr11:679779 | 0.201 | 0.246 | 0.353 | — |
| chr11_679862_A_C | chr11:679862 | -0.176 | -0.211 | -0.353 | — |
| chr11_679686_A_T | chr11:679686 | 0.193 | 0.099 | 0.241 | — |
| chr11_679705_A_G | chr11:679705 | 0.115 | 0.208 | 0.341 | — |
| chr11_679687_C_G | chr11:679687 | 0.191 | 0.079 | 0.218 | — |
| chr11_679781_C_G | chr11:679781 | 0.180 | 0.208 | 0.335 | — |
| chr11_679686_A_G | chr11:679686 | 0.188 | 0.048 | 0.259 | — |
| chr11_679789_G_A | chr11:679789 | 0.188 | 0.368 | 0.294 | — |
| chr11_679863_C_A | chr11:679863 | 0.187 | 0.208 | 0.218 | <0.001% |
| chr11_679686_A_C | chr11:679686 | 0.186 | 0.071 | 0.188 | — |
| chr11_679730_A_T | chr11:679730 | 0.161 | 0.254 | 0.329 | — |
| chr11_679775_G_A | chr11:679775 | 0.166 | 0.277 | 0.329 | — |
| chr11_679789_G_C | chr11:679789 | -0.155 | -0.307 | -0.329 | — |
| chr11_679790_T_G | chr11:679790 | -0.145 | -0.279 | -0.329 | — |
| chr11_679794_C_A | chr11:679794 | -0.186 | -0.266 | -0.324 | — |
| chr11_679800_C_A | chr11:679800 | 0.185 | 0.289 | 0.194 | — |
| chr11_679737_A_C | chr11:679737 | 0.165 | 0.256 | 0.324 | — |
| chr11_679783_G_T | chr11:679783 | -0.170 | -0.239 | -0.324 | — |
| chr11_679786_G_A | chr11:679786 | -0.181 | -0.338 | -0.324 | — |
| chr11_679809_C_T | chr11:679809 | -0.156 | -0.226 | -0.324 | — |
| chr11_679814_T_A | chr11:679814 | -0.175 | -0.246 | -0.324 | — |
| chr11_679860_C_G | chr11:679860 | -0.170 | -0.198 | -0.324 | — |
| chr11_679732_A_C | chr11:679732 | 0.180 | 0.216 | 0.271 | — |
| chr11_679687_C_A | chr11:679687 | 0.176 | 0.081 | 0.147 | — |
| chr11_679767_A_T | chr11:679767 | -0.176 | -0.348 | -0.306 | — |
| chr11_679769_A_T | chr11:679769 | -0.155 | -0.305 | -0.312 | — |
| chr11_679858_G_C | chr11:679858 | -0.151 | -0.241 | -0.312 | — |
| chr11_679692_G_C | chr11:679692 | -0.133 | -0.221 | -0.306 | — |
| chr11_679707_G_C | chr11:679707 | 0.145 | 0.264 | 0.306 | — |
| chr11_679798_C_G | chr11:679798 | 0.173 | 0.249 | 0.253 | — |
| chr11_679801_G_C | chr11:679801 | 0.173 | 0.244 | 0.306 | — |
| chr11_679835_A_T | chr11:679835 | 0.140 | 0.157 | 0.306 | — |
| chr11_679861_C_A | chr11:679861 | 0.173 | 0.157 | 0.165 | <0.001% |
| chr11_679729_G_T | chr11:679729 | -0.160 | -0.259 | -0.300 | — |
| chr11_679811_C_G | chr11:679811 | 0.160 | 0.241 | 0.300 | — |
| chr11_679829_A_T | chr11:679829 | 0.136 | 0.173 | 0.300 | — |
| chr11_679864_G_C | chr11:679864 | -0.163 | -0.211 | -0.300 | — |
| chr11_679753_G_C | chr11:679753 | 0.168 | 0.239 | 0.265 | — |
| chr11_679807_G_A | chr11:679807 | -0.167 | -0.269 | -0.294 | <0.001% |
| chr11_679632_A_T | chr11:679632 | 0.114 | 0.173 | 0.294 | — |
| chr11_679690_G_A | chr11:679690 | 0.166 | 0.251 | 0.229 | — |
| chr11_679761_T_G | chr11:679761 | 0.072 | 0.127 | 0.294 | — |
| chr11_679768_A_T | chr11:679768 | -0.156 | -0.254 | -0.294 | — |
| chr11_679848_A_C | chr11:679848 | -0.141 | -0.185 | -0.294 | — |
| chr11_679757_A_G | chr11:679757 | -0.165 | -0.216 | -0.200 | — |
| chr11_679631_G_T | chr11:679631 | 0.125 | 0.211 | 0.288 | — |
| chr11_679776_T_G | chr11:679776 | -0.163 | -0.183 | -0.235 | — |
| chr11_679848_A_G | chr11:679848 | -0.116 | -0.162 | -0.288 | — |
| chr11_679861_C_G | chr11:679861 | -0.121 | -0.203 | -0.288 | — |
| chr11_679865_G_T | chr11:679865 | 0.161 | 0.218 | 0.288 | — |
| chr11_679841_C_G | chr11:679841 | 0.162 | 0.193 | 0.159 | — |
| chr11_679886_C_A | chr11:679886 | 0.162 | 0.135 | 0.088 | — |
| chr11_679710_G_A | chr11:679710 | 0.161 | 0.241 | 0.247 | — |
| chr11_679758_C_T | chr11:679758 | -0.098 | -0.145 | -0.282 | 0.0020% |
| chr11_679821_A_T | chr11:679821 | 0.132 | 0.178 | 0.282 | — |
| chr11_679826_C_A | chr11:679826 | -0.101 | -0.137 | -0.282 | — |
| chr11_679847_C_A | chr11:679847 | -0.149 | -0.185 | -0.282 | — |
| chr11_679885_C_T | chr11:679885 | 0.159 | 0.223 | 0.165 | — |
| chr11_679668_C_T | chr11:679668 | -0.158 | -0.168 | -0.224 | — |
| chr11_679724_T_C | chr11:679724 | -0.156 | -0.269 | -0.265 | — |
| chr11_679763_G_T | chr11:679763 | -0.155 | -0.279 | -0.276 | — |
| chr11_679803_G_A | chr11:679803 | 0.156 | 0.228 | 0.247 | 0.0020% |
| chr11_679814_T_C | chr11:679814 | -0.156 | -0.198 | -0.276 | — |
| chr11_679838_T_C | chr11:679838 | 0.149 | 0.178 | 0.276 | — |
| chr11_679752_C_G | chr11:679752 | -0.155 | -0.206 | -0.265 | — |
| chr11_679634_G_T | chr11:679634 | 0.118 | 0.206 | 0.271 | — |
| chr11_679672_C_T | chr11:679672 | -0.135 | -0.165 | -0.271 | — |
| chr11_679788_C_T | chr11:679788 | -0.111 | -0.226 | -0.271 | 0.0013% |
| chr11_679829_A_C | chr11:679829 | 0.108 | 0.140 | 0.271 | — |
| chr11_679841_C_T | chr11:679841 | 0.153 | 0.203 | 0.194 | 0.0013% |
| chr11_679857_C_G | chr11:679857 | -0.132 | -0.185 | -0.271 | — |
| chr11_679853_G_A | chr11:679853 | -0.129 | -0.206 | -0.265 | — |
| chr11_679709_C_T | chr11:679709 | 0.148 | 0.180 | 0.200 | 0.0020% |
| chr11_679631_G_C | chr11:679631 | 0.118 | 0.178 | 0.259 | — |
| chr11_679805_G_T | chr11:679805 | 0.146 | 0.175 | 0.253 | — |
| chr11_679809_C_A | chr11:679809 | -0.101 | -0.178 | -0.259 | — |
| chr11_679683_C_A | chr11:679683 | 0.145 | 0.157 | 0.147 | — |
| chr11_679778_C_T | chr11:679778 | 0.145 | 0.160 | 0.241 | — |
| chr11_679845_G_C | chr11:679845 | -0.145 | -0.198 | -0.188 | — |
| chr11_679634_G_C | chr11:679634 | 0.116 | 0.178 | 0.253 | — |
| chr11_679746_C_G | chr11:679746 | -0.143 | -0.223 | -0.218 | — |
| chr11_679765_T_G | chr11:679765 | 0.105 | 0.076 | 0.253 | — |
| chr11_679813_G_A | chr11:679813 | -0.126 | -0.168 | -0.253 | — |
| chr11_679830_A_T | chr11:679830 | 0.143 | 0.145 | 0.212 | — |
| chr11_679720_G_C | chr11:679720 | -0.140 | -0.190 | -0.188 | — |
| chr11_679769_A_C | chr11:679769 | -0.125 | -0.274 | -0.247 | — |
| chr11_679781_C_A | chr11:679781 | 0.118 | 0.114 | 0.247 | — |
| chr11_679834_C_T | chr11:679834 | 0.138 | 0.155 | 0.212 | — |
| chr11_679886_C_G | chr11:679886 | 0.138 | 0.119 | 0.106 | — |
| chr11_679846_C_A | chr11:679846 | -0.136 | -0.165 | -0.229 | — |
| chr11_679858_G_A | chr11:679858 | -0.123 | -0.213 | -0.241 | 0.014% |
| chr11_679687_C_T | chr11:679687 | 0.135 | 0.025 | 0.065 | — |
| chr11_679701_G_A | chr11:679701 | 0.135 | 0.213 | 0.229 | <0.001% |
| chr11_679771_G_A | chr11:679771 | -0.135 | -0.264 | -0.206 | — |
| chr11_679629_G_C | chr11:679629 | 0.115 | 0.170 | 0.235 | — |
| chr11_679712_C_G | chr11:679712 | -0.133 | -0.165 | -0.176 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.