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GGA3
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near GGA3
chr17:75,136,598..75,362,363, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_75189417_A_T | chr17:75189417 | 24,000 | 14,560 | 45,824 | — |
| chr17_75182608_G_T | chr17:75182608 | 18,048 | 1,480 | 27,648 | — |
| chr17_75189417_A_C | chr17:75189417 | 16,256 | 11,040 | 27,648 | — |
| chr17_75182669_C_G | chr17:75182669 | 14,592 | 456 | 7,936 | — |
| chr17_75189423_A_T | chr17:75189423 | 13,808 | 9,376 | 26,048 | — |
| chr17_75189451_C_A | chr17:75189451 | 13,088 | 4,192 | 25,472 | — |
| chr17_75189356_C_T | chr17:75189356 | 11,680 | 2,848 | 13,696 | — |
| chr17_75189451_C_G | chr17:75189451 | 11,472 | 3,744 | 19,712 | — |
| chr17_75189427_C_A | chr17:75189427 | 11,208 | 8,256 | 23,296 | — |
| chr17_75182608_G_C | chr17:75182608 | 11,008 | 272 | 12,544 | — |
| chr17_75189423_A_C | chr17:75189423 | 8,720 | 7,552 | 16,832 | — |
| chr17_75189444_C_A | chr17:75189444 | 7,856 | 2,528 | 14,208 | — |
| chr17_75182606_G_A | chr17:75182606 | 6,912 | 496 | 17,408 | 1.3e-5 |
| chr17_75189369_T_C | chr17:75189369 | -6,552 | -2,976 | -11,328 | — |
| chr17_75189366_G_C | chr17:75189366 | -6,520 | -3,520 | -13,376 | — |
| chr17_75189366_G_A | chr17:75189366 | -6,412 | -3,552 | -13,184 | 6.6e-6 |
| chr17_75189418_G_C | chr17:75189418 | -6,064 | -6,608 | -11,840 | 3.5e-2 |
| chr17_75189351_G_T | chr17:75189351 | 6,032 | 3,072 | 13,184 | — |
| chr17_75189372_T_A | chr17:75189372 | -5,928 | -2,112 | -12,608 | — |
| chr17_75189371_A_C | chr17:75189371 | -5,908 | -3,392 | -11,008 | — |
| chr17_75189443_A_T | chr17:75189443 | 5,872 | 3,456 | 13,312 | — |
| chr17_75189364_C_T | chr17:75189364 | -5,848 | -2,720 | -12,864 | — |
| chr17_75189443_A_G | chr17:75189443 | 5,824 | 2,496 | 11,264 | 2.0e-5 |
| chr17_75182613_A_G | chr17:75182613 | -5,696 | -1,016 | -17,408 | — |
| chr17_75189367_A_T | chr17:75189367 | -5,648 | -2,912 | -12,160 | — |
| chr17_75189371_A_T | chr17:75189371 | -5,644 | -3,360 | -11,520 | — |
| chr17_75189416_G_A | chr17:75189416 | -5,552 | -5,952 | -13,312 | — |
| chr17_75189365_T_A | chr17:75189365 | -5,504 | -2,560 | -11,200 | — |
| chr17_75189370_C_T | chr17:75189370 | -5,448 | -3,072 | -11,584 | — |
| chr17_75189370_C_G | chr17:75189370 | -5,400 | -3,360 | -10,816 | — |
| chr17_75189367_A_C | chr17:75189367 | -5,296 | -3,328 | -11,392 | — |
| chr17_75189365_T_G | chr17:75189365 | -5,280 | -2,752 | -11,008 | — |
| chr17_75189368_C_T | chr17:75189368 | -5,272 | -2,784 | -10,944 | — |
| chr17_75189415_A_G | chr17:75189415 | -5,256 | -5,856 | -10,624 | — |
| chr17_75189345_A_G | chr17:75189345 | 5,240 | 1,984 | 10,368 | — |
| chr17_75189406_A_G | chr17:75189406 | 5,032 | 2,176 | 11,072 | — |
| chr17_75189367_A_G | chr17:75189367 | -4,972 | -2,912 | -10,368 | — |
| chr17_75189416_G_T | chr17:75189416 | -4,864 | -5,760 | -13,696 | — |
| chr17_75182611_A_G | chr17:75182611 | -4,480 | -1,248 | -16,512 | — |
| chr17_75189351_G_C | chr17:75189351 | 4,392 | 2,304 | 11,264 | — |
| chr17_75189413_A_T | chr17:75189413 | -4,272 | -5,792 | -11,648 | — |
| chr17_75189413_A_G | chr17:75189413 | -4,272 | -5,920 | -11,008 | — |
| chr17_75189419_A_T | chr17:75189419 | -4,208 | -5,504 | -11,264 | — |
| chr17_75189413_A_C | chr17:75189413 | -4,168 | -5,840 | -10,752 | — |
| chr17_75189445_C_G | chr17:75189445 | 4,160 | 2,720 | 12,928 | — |
| chr17_75189412_G_A | chr17:75189412 | -4,104 | -5,536 | -12,864 | — |
| chr17_75189412_G_T | chr17:75189412 | -4,096 | -5,904 | -12,992 | — |
| chr17_75189414_A_T | chr17:75189414 | -3,992 | -5,616 | -11,904 | — |
| chr17_75189412_G_C | chr17:75189412 | -3,920 | -5,840 | -12,672 | — |
| chr17_75189414_A_G | chr17:75189414 | -3,872 | -5,808 | -10,752 | — |
| chr17_75182613_A_C | chr17:75182613 | -3,712 | -1,000 | -17,920 | — |
| chr17_75182609_A_G | chr17:75182609 | -3,712 | -784 | -15,872 | — |
| chr17_75189420_A_G | chr17:75189420 | -3,648 | -5,424 | -10,304 | — |
| chr17_75182754_C_T | chr17:75182754 | 3,584 | 1,096 | 13,952 | — |
| chr17_75189336_G_C | chr17:75189336 | 3,560 | 1,088 | 18,048 | — |
| chr17_75189444_C_G | chr17:75189444 | 3,408 | 1,824 | 11,264 | — |
| chr17_75182753_C_T | chr17:75182753 | 3,328 | 1,672 | 16,896 | — |
| chr17_75182708_G_A | chr17:75182708 | 3,328 | 560 | 11,520 | — |
| chr17_75182639_A_G | chr17:75182639 | -3,200 | -96 | -16,000 | — |
| chr17_75182754_C_A | chr17:75182754 | 3,200 | 1,256 | 13,184 | — |
| chr17_75182753_C_A | chr17:75182753 | 3,072 | 1,760 | 17,408 | — |
| chr17_75182709_G_A | chr17:75182709 | 3,072 | 648 | 12,800 | — |
| chr17_75182683_G_A | chr17:75182683 | 3,072 | 576 | 11,520 | — |
| chr17_75182776_A_C | chr17:75182776 | -3,072 | -536 | -11,136 | — |
| chr17_75189420_A_T | chr17:75189420 | -2,880 | -5,328 | -11,776 | — |
| chr17_75182668_G_A | chr17:75182668 | 2,816 | 656 | 10,752 | — |
| chr17_75182760_C_A | chr17:75182760 | 2,688 | 1,320 | 18,816 | — |
| chr17_75182750_G_T | chr17:75182750 | 2,688 | 1,712 | 15,360 | — |
| chr17_75182698_G_A | chr17:75182698 | 2,560 | 800 | 11,008 | — |
| chr17_75182755_C_T | chr17:75182755 | 2,432 | 1,088 | 15,232 | — |
| chr17_75182712_C_A | chr17:75182712 | 2,432 | 640 | 11,776 | — |
| chr17_75182711_G_A | chr17:75182711 | 2,432 | 608 | 11,008 | — |
| chr17_75189446_T_G | chr17:75189446 | 2,032 | 2,560 | 12,928 | — |
| chr17_75182759_C_T | chr17:75182759 | 1,920 | 1,232 | 17,152 | 6.6e-6 |
| chr17_75182772_C_A | chr17:75182772 | 1,920 | 992 | 13,824 | — |
| chr17_75182616_G_A | chr17:75182616 | 1,920 | 432 | 11,008 | — |
| chr17_75189418_G_T | chr17:75189418 | -1,848 | -6,336 | -11,200 | — |
| chr17_75182759_C_A | chr17:75182759 | 1,792 | 1,136 | 16,128 | — |
| chr17_75182797_G_A | chr17:75182797 | 1,792 | 776 | 11,264 | — |
| chr17_75182712_C_T | chr17:75182712 | 1,792 | 800 | 10,752 | — |
| chr17_75182729_A_G | chr17:75182729 | -1,728 | -600 | -12,544 | — |
| chr17_75189452_C_G | chr17:75189452 | 1,680 | 2,848 | 13,056 | — |
| chr17_75182752_A_C | chr17:75182752 | -1,664 | -896 | -15,744 | — |
| chr17_75182740_G_T | chr17:75182740 | 1,664 | 792 | 12,288 | — |
| chr17_75182737_G_A | chr17:75182737 | 1,536 | 952 | 15,744 | — |
| chr17_75182699_G_T | chr17:75182699 | 1,536 | 808 | 13,056 | — |
| chr17_75182739_G_T | chr17:75182739 | 1,536 | 840 | 12,928 | — |
| chr17_75182755_C_A | chr17:75182755 | 1,536 | 760 | 12,672 | — |
| chr17_75182684_C_A | chr17:75182684 | 1,536 | 800 | 12,544 | — |
| chr17_75182742_C_A | chr17:75182742 | 1,536 | 864 | 12,032 | — |
| chr17_75182643_A_G | chr17:75182643 | -1,536 | -40 | -11,392 | — |
| chr17_75182785_C_T | chr17:75182785 | 1,536 | 880 | 10,368 | — |
| chr17_75182696_C_A | chr17:75182696 | 1,408 | 816 | 12,544 | — |
| chr17_75182700_C_T | chr17:75182700 | 1,408 | 688 | 12,032 | — |
| chr17_75182684_C_T | chr17:75182684 | 1,408 | 816 | 11,264 | — |
| chr17_75182625_T_C | chr17:75182625 | -1,408 | -264 | -10,496 | — |
| chr17_75182764_G_A | chr17:75182764 | 1,344 | 824 | 11,520 | — |
| chr17_75182761_C_A | chr17:75182761 | 1,280 | 1,320 | 18,560 | — |
| chr17_75182738_C_T | chr17:75182738 | -1,280 | 1,008 | 16,768 | — |
| chr17_75182702_C_A | chr17:75182702 | 1,280 | 528 | 14,336 | — |
| chr17_75182752_A_G | chr17:75182752 | -1,280 | -792 | -14,208 | — |
| chr17_75182769_G_T | chr17:75182769 | -1,280 | 736 | 12,032 | — |
| chr17_75182784_G_A | chr17:75182784 | 1,280 | 992 | 12,032 | — |
| chr17_75182737_G_T | chr17:75182737 | 1,280 | 728 | 11,136 | — |
| chr17_75182697_C_T | chr17:75182697 | 1,280 | 600 | 10,624 | — |
| chr17_75182714_C_A | chr17:75182714 | 1,280 | 840 | 10,624 | — |
| chr17_75182725_T_G | chr17:75182725 | -1,216 | -728 | -12,928 | — |
| chr17_75182787_A_C | chr17:75182787 | -1,152 | -1,152 | -16,896 | — |
| chr17_75182760_C_T | chr17:75182760 | 1,152 | 1,144 | 15,232 | — |
| chr17_75182739_G_A | chr17:75182739 | 1,152 | 784 | 13,696 | — |
| chr17_75182787_A_G | chr17:75182787 | -1,152 | -864 | -13,312 | — |
| chr17_75182747_G_A | chr17:75182747 | 1,152 | 920 | 12,544 | — |
| chr17_75182758_G_A | chr17:75182758 | 1,152 | 1,032 | 11,264 | — |
| chr17_75182740_G_A | chr17:75182740 | 1,152 | 784 | 10,496 | — |
| chr17_75182741_G_A | chr17:75182741 | 1,024 | 1,056 | 16,768 | — |
| chr17_75182743_T_G | chr17:75182743 | -1,024 | -888 | -15,104 | — |
| chr17_75182780_C_T | chr17:75182780 | -1,024 | 968 | 13,824 | — |
| chr17_75182782_C_A | chr17:75182782 | 1,024 | 1,216 | 13,824 | 2.0e-5 |
| chr17_75182745_T_G | chr17:75182745 | -1,024 | -616 | -12,160 | — |
| chr17_75182783_G_A | chr17:75182783 | 1,024 | 904 | 12,032 | — |
| chr17_75182693_C_T | chr17:75182693 | 1,024 | 592 | 11,008 | — |
| chr17_75182723_G_T | chr17:75182723 | -1,024 | 832 | 10,752 | — |
| chr17_75182762_G_T | chr17:75182762 | 896 | 1,440 | 18,688 | — |
| chr17_75182736_G_T | chr17:75182736 | 896 | 968 | 15,104 | — |
| chr17_75182768_T_C | chr17:75182768 | -896 | -1,040 | -14,208 | — |
| chr17_75182793_A_C | chr17:75182793 | -896 | -776 | -12,032 | — |
| chr17_75182778_C_A | chr17:75182778 | 896 | 736 | 11,648 | — |
| chr17_75182799_C_A | chr17:75182799 | 896 | 808 | 11,520 | — |
| chr17_75182743_T_C | chr17:75182743 | -896 | -664 | -11,264 | — |
| chr17_75182771_C_T | chr17:75182771 | 896 | 856 | 11,264 | — |
| chr17_75182766_C_T | chr17:75182766 | 896 | 752 | 11,008 | — |
| chr17_75182695_G_T | chr17:75182695 | 896 | 736 | 10,496 | — |
| chr17_75182800_G_T | chr17:75182800 | -896 | 864 | 10,496 | 6.6e-6 |
| chr17_75189363_T_G | chr17:75189363 | 880 | 992 | 23,040 | — |
| chr17_75182757_G_A | chr17:75182757 | 768 | 1,344 | 18,688 | — |
| chr17_75182763_C_T | chr17:75182763 | 768 | 1,176 | 17,408 | — |
| chr17_75182758_G_T | chr17:75182758 | 768 | 1,232 | 16,128 | — |
| chr17_75182746_G_A | chr17:75182746 | 768 | 1,112 | 15,360 | — |
| chr17_75182729_A_C | chr17:75182729 | -768 | -664 | -14,464 | — |
| chr17_75182732_C_T | chr17:75182732 | 768 | 912 | 13,568 | — |
| chr17_75182756_C_T | chr17:75182756 | 768 | 888 | 12,800 | — |
| chr17_75182756_C_A | chr17:75182756 | 768 | 816 | 12,288 | — |
| chr17_75182749_C_T | chr17:75182749 | 768 | 840 | 11,264 | — |
| chr17_75182608_G_A | chr17:75182608 | 768 | 1,256 | 10,496 | — |
| chr17_75182715_G_A | chr17:75182715 | 768 | 824 | 10,496 | — |
| chr17_75182734_G_T | chr17:75182734 | 768 | 776 | 10,240 | — |
| chr17_75182723_G_A | chr17:75182723 | -640 | 1,024 | 14,336 | — |
| chr17_75182731_C_T | chr17:75182731 | -640 | 872 | 13,568 | — |
| chr17_75182706_G_A | chr17:75182706 | 640 | 728 | 13,312 | 6.6e-6 |
| chr17_75182785_C_A | chr17:75182785 | 640 | 1,056 | 12,672 | — |
| chr17_75182772_C_T | chr17:75182772 | 640 | 824 | 12,544 | — |
| chr17_75182750_G_A | chr17:75182750 | 640 | 912 | 12,288 | — |
| chr17_75182781_G_T | chr17:75182781 | 640 | 896 | 11,520 | — |
| chr17_75182765_C_A | chr17:75182765 | 640 | 1,008 | 11,008 | — |
| chr17_75182693_C_A | chr17:75182693 | 640 | 752 | 10,752 | — |
| chr17_75182609_A_C | chr17:75182609 | 640 | -880 | -10,624 | — |
| chr17_75182764_G_T | chr17:75182764 | 576 | 1,048 | 13,824 | — |
| chr17_75182738_C_A | chr17:75182738 | 512 | 968 | 17,280 | — |
| chr17_75182746_G_T | chr17:75182746 | 512 | 1,344 | 17,152 | — |
| chr17_75182781_G_A | chr17:75182781 | 512 | 1,216 | 16,384 | — |
| chr17_75182802_C_T | chr17:75182802 | 512 | 1,056 | 12,288 | — |
| chr17_75182798_C_A | chr17:75182798 | 512 | 928 | 11,520 | — |
| chr17_75182692_G_A | chr17:75182692 | 512 | 640 | 11,008 | — |
| chr17_75182779_G_A | chr17:75182779 | 512 | 656 | 10,496 | — |
| chr17_75182768_T_G | chr17:75182768 | -512 | -608 | -10,368 | — |
| chr17_75182749_C_A | chr17:75182749 | 384 | 984 | 15,360 | — |
| chr17_75182767_A_G | chr17:75182767 | -384 | -968 | -14,720 | — |
| chr17_75182776_A_G | chr17:75182776 | -384 | -1,016 | -14,720 | — |
| chr17_75182747_G_T | chr17:75182747 | 384 | 1,088 | 14,592 | — |
| chr17_75182763_C_A | chr17:75182763 | -384 | 968 | 14,592 | — |
| chr17_75182748_C_T | chr17:75182748 | -384 | 848 | 14,080 | — |
| chr17_75182724_C_T | chr17:75182724 | -384 | 800 | 13,056 | — |
| chr17_75182751_G_A | chr17:75182751 | 384 | 888 | 12,288 | — |
| chr17_75182726_G_A | chr17:75182726 | 384 | 840 | 11,520 | 5.3e-5 |
| chr17_75182780_C_A | chr17:75182780 | -384 | 856 | 11,008 | — |
| chr17_75182725_T_C | chr17:75182725 | -384 | -464 | -10,368 | — |
| chr17_75182722_C_A | chr17:75182722 | 384 | 792 | 10,240 | 6.6e-6 |
| chr17_75182730_G_T | chr17:75182730 | 320 | 920 | 11,776 | — |
| chr17_75182762_G_A | chr17:75182762 | 256 | 1,192 | 17,152 | — |
| chr17_75182735_C_A | chr17:75182735 | -256 | 1,064 | 16,384 | — |
| chr17_75182783_G_T | chr17:75182783 | 256 | 1,104 | 15,104 | — |
| chr17_75182748_C_A | chr17:75182748 | -256 | 864 | 14,080 | — |
| chr17_75182735_C_T | chr17:75182735 | -256 | 816 | 13,312 | — |
| chr17_75182778_C_T | chr17:75182778 | -256 | 824 | 12,672 | 6.6e-6 |
| chr17_75182779_G_T | chr17:75182779 | 256 | 1,112 | 12,288 | — |
| chr17_75182698_G_T | chr17:75182698 | 256 | 816 | 11,264 | — |
| chr17_75182789_G_T | chr17:75182789 | 256 | 896 | 10,752 | — |
| chr17_75182722_C_T | chr17:75182722 | 192 | 824 | 10,496 | 6.6e-6 |
| chr17_75182757_G_T | chr17:75182757 | -128 | 1,728 | 19,968 | — |
| chr17_75182761_C_T | chr17:75182761 | 128 | 1,184 | 17,280 | — |
| chr17_75182751_G_T | chr17:75182751 | -128 | 1,256 | 16,896 | — |
| chr17_75182782_C_T | chr17:75182782 | 128 | 1,040 | 16,384 | — |
| chr17_75182611_A_C | chr17:75182611 | 128 | -936 | -13,440 | — |
| chr17_75182724_C_A | chr17:75182724 | -128 | 976 | 12,800 | 6.6e-6 |
| chr17_75182802_C_A | chr17:75182802 | 128 | 1,016 | 12,800 | — |
| chr17_75182692_G_T | chr17:75182692 | -128 | 736 | 10,240 | — |
| chr17_75182736_G_A | chr17:75182736 | 0 | 904 | 15,104 | — |
| chr17_75182765_C_T | chr17:75182765 | 0 | 1,344 | 14,080 | — |
| chr17_75182718_A_C | chr17:75182718 | 0 | -744 | -12,288 | — |
| chr17_75182741_G_T | chr17:75182741 | 0 | 808 | 11,904 | — |
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