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GGA3
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near GGA3
chr17:75,136,598..75,362,363, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_75189417_A_T | chr17:75189417 | 0.624 | 1.000 | 1.000 | — |
| chr17_75182608_G_T | chr17:75182608 | 0.469 | 0.117 | 1.000 | — |
| chr17_75189417_A_C | chr17:75189417 | 0.423 | 0.876 | 1.000 | — |
| chr17_75189423_A_T | chr17:75189423 | 0.359 | 0.744 | 1.000 | — |
| chr17_75189451_C_A | chr17:75189451 | 0.340 | 0.332 | 1.000 | — |
| chr17_75189427_C_A | chr17:75189427 | 0.291 | 0.655 | 1.000 | — |
| chr17_75189363_T_G | chr17:75189363 | 0.023 | 0.079 | 1.000 | — |
| chr17_75182757_G_T | chr17:75182757 | -0.003 | 0.137 | 0.918 | — |
| chr17_75189451_C_G | chr17:75189451 | 0.298 | 0.297 | 0.906 | — |
| chr17_75182760_C_A | chr17:75182760 | 0.070 | 0.105 | 0.865 | — |
| chr17_75182757_G_A | chr17:75182757 | 0.020 | 0.107 | 0.859 | — |
| chr17_75182762_G_T | chr17:75182762 | 0.023 | 0.114 | 0.859 | — |
| chr17_75182761_C_A | chr17:75182761 | 0.033 | 0.105 | 0.853 | — |
| chr17_75189336_G_C | chr17:75189336 | 0.093 | 0.086 | 0.829 | — |
| chr17_75182613_A_C | chr17:75182613 | -0.097 | -0.079 | -0.824 | — |
| chr17_75182606_G_A | chr17:75182606 | 0.180 | 0.039 | 0.800 | 0.0013% |
| chr17_75182613_A_G | chr17:75182613 | -0.148 | -0.081 | -0.800 | — |
| chr17_75182753_C_A | chr17:75182753 | 0.080 | 0.140 | 0.800 | — |
| chr17_75182763_C_T | chr17:75182763 | 0.020 | 0.093 | 0.800 | — |
| chr17_75182738_C_A | chr17:75182738 | 0.013 | 0.077 | 0.794 | — |
| chr17_75182761_C_T | chr17:75182761 | 0.003 | 0.094 | 0.794 | — |
| chr17_75182746_G_T | chr17:75182746 | 0.013 | 0.107 | 0.788 | — |
| chr17_75182759_C_T | chr17:75182759 | 0.050 | 0.098 | 0.788 | <0.001% |
| chr17_75182762_G_A | chr17:75182762 | 0.007 | 0.095 | 0.788 | — |
| chr17_75182751_G_T | chr17:75182751 | -0.003 | 0.100 | 0.776 | — |
| chr17_75182753_C_T | chr17:75182753 | 0.087 | 0.133 | 0.776 | — |
| chr17_75182787_A_C | chr17:75182787 | -0.030 | -0.091 | -0.776 | — |
| chr17_75189423_A_C | chr17:75189423 | 0.227 | 0.599 | 0.774 | — |
| chr17_75182738_C_T | chr17:75182738 | -0.033 | 0.080 | 0.771 | — |
| chr17_75182741_G_A | chr17:75182741 | 0.027 | 0.084 | 0.771 | — |
| chr17_75182611_A_G | chr17:75182611 | -0.116 | -0.099 | -0.759 | — |
| chr17_75182735_C_A | chr17:75182735 | -0.007 | 0.084 | 0.753 | — |
| chr17_75182781_G_A | chr17:75182781 | 0.013 | 0.096 | 0.753 | — |
| chr17_75182782_C_T | chr17:75182782 | 0.003 | 0.082 | 0.753 | — |
| chr17_75182758_G_T | chr17:75182758 | 0.020 | 0.098 | 0.741 | — |
| chr17_75182759_C_A | chr17:75182759 | 0.047 | 0.090 | 0.741 | — |
| chr17_75182639_A_G | chr17:75182639 | -0.083 | -0.008 | -0.735 | — |
| chr17_75182609_A_G | chr17:75182609 | -0.097 | -0.062 | -0.729 | — |
| chr17_75182737_G_A | chr17:75182737 | 0.040 | 0.076 | 0.724 | — |
| chr17_75182752_A_C | chr17:75182752 | -0.043 | -0.071 | -0.724 | — |
| chr17_75182746_G_A | chr17:75182746 | 0.020 | 0.088 | 0.706 | — |
| chr17_75182749_C_A | chr17:75182749 | 0.010 | 0.078 | 0.706 | — |
| chr17_75182750_G_T | chr17:75182750 | 0.070 | 0.136 | 0.706 | — |
| chr17_75182755_C_T | chr17:75182755 | 0.063 | 0.086 | 0.700 | — |
| chr17_75182760_C_T | chr17:75182760 | 0.030 | 0.091 | 0.700 | — |
| chr17_75182736_G_A | chr17:75182736 | 0.000 | 0.072 | 0.694 | — |
| chr17_75182736_G_T | chr17:75182736 | 0.023 | 0.077 | 0.694 | — |
| chr17_75182743_T_G | chr17:75182743 | -0.027 | -0.070 | -0.694 | — |
| chr17_75182783_G_T | chr17:75182783 | 0.007 | 0.088 | 0.694 | — |
| chr17_75182767_A_G | chr17:75182767 | -0.010 | -0.077 | -0.676 | — |
| chr17_75182776_A_G | chr17:75182776 | -0.010 | -0.081 | -0.676 | — |
| chr17_75182669_C_G | chr17:75182669 | 0.379 | 0.036 | 0.365 | — |
| chr17_75182747_G_T | chr17:75182747 | 0.010 | 0.086 | 0.671 | — |
| chr17_75182763_C_A | chr17:75182763 | -0.010 | 0.077 | 0.671 | — |
| chr17_75182729_A_C | chr17:75182729 | -0.020 | -0.053 | -0.665 | — |
| chr17_75182702_C_A | chr17:75182702 | 0.033 | 0.042 | 0.659 | — |
| chr17_75182723_G_A | chr17:75182723 | -0.017 | 0.081 | 0.659 | — |
| chr17_75182752_A_G | chr17:75182752 | -0.033 | -0.063 | -0.653 | — |
| chr17_75182768_T_C | chr17:75182768 | -0.023 | -0.082 | -0.653 | — |
| chr17_75189444_C_A | chr17:75189444 | 0.204 | 0.201 | 0.653 | — |
| chr17_75182748_C_A | chr17:75182748 | -0.007 | 0.069 | 0.647 | — |
| chr17_75182748_C_T | chr17:75182748 | -0.010 | 0.067 | 0.647 | — |
| chr17_75182765_C_T | chr17:75182765 | 0.000 | 0.107 | 0.647 | — |
| chr17_75182754_C_T | chr17:75182754 | 0.093 | 0.087 | 0.641 | — |
| chr17_75182764_G_T | chr17:75182764 | 0.015 | 0.083 | 0.635 | — |
| chr17_75182772_C_A | chr17:75182772 | 0.050 | 0.079 | 0.635 | — |
| chr17_75182780_C_T | chr17:75182780 | -0.027 | 0.077 | 0.635 | — |
| chr17_75182782_C_A | chr17:75182782 | 0.027 | 0.096 | 0.635 | 0.0020% |
| chr17_75182739_G_A | chr17:75182739 | 0.030 | 0.062 | 0.629 | — |
| chr17_75189356_C_T | chr17:75189356 | 0.304 | 0.226 | 0.629 | — |
| chr17_75189416_G_T | chr17:75189416 | -0.126 | -0.457 | -0.629 | — |
| chr17_75182731_C_T | chr17:75182731 | -0.017 | 0.069 | 0.624 | — |
| chr17_75182732_C_T | chr17:75182732 | 0.020 | 0.072 | 0.624 | — |
| chr17_75182611_A_C | chr17:75182611 | 0.003 | -0.074 | -0.618 | — |
| chr17_75189366_G_C | chr17:75189366 | -0.170 | -0.279 | -0.615 | — |
| chr17_75182706_G_A | chr17:75182706 | 0.017 | 0.058 | 0.612 | <0.001% |
| chr17_75182735_C_T | chr17:75182735 | -0.007 | 0.065 | 0.612 | — |
| chr17_75182787_A_G | chr17:75182787 | -0.030 | -0.069 | -0.612 | — |
| chr17_75189416_G_A | chr17:75189416 | -0.144 | -0.472 | -0.612 | — |
| chr17_75189443_A_T | chr17:75189443 | 0.153 | 0.274 | 0.612 | — |
| chr17_75182754_C_A | chr17:75182754 | 0.083 | 0.100 | 0.606 | — |
| chr17_75189351_G_T | chr17:75189351 | 0.157 | 0.244 | 0.606 | — |
| chr17_75189366_G_A | chr17:75189366 | -0.167 | -0.282 | -0.606 | <0.001% |
| chr17_75182699_G_T | chr17:75182699 | 0.040 | 0.064 | 0.600 | — |
| chr17_75182724_C_T | chr17:75182724 | -0.010 | 0.063 | 0.600 | — |
| chr17_75189452_C_G | chr17:75189452 | 0.044 | 0.226 | 0.600 | — |
| chr17_75189412_G_T | chr17:75189412 | -0.106 | -0.468 | -0.597 | — |
| chr17_75182725_T_G | chr17:75182725 | -0.032 | -0.058 | -0.594 | — |
| chr17_75182739_G_T | chr17:75182739 | 0.040 | 0.067 | 0.594 | — |
| chr17_75189445_C_G | chr17:75189445 | 0.108 | 0.216 | 0.594 | — |
| chr17_75189446_T_G | chr17:75189446 | 0.053 | 0.203 | 0.594 | — |
| chr17_75189364_C_T | chr17:75189364 | -0.152 | -0.216 | -0.591 | — |
| chr17_75189412_G_A | chr17:75189412 | -0.107 | -0.439 | -0.591 | — |
| chr17_75182709_G_A | chr17:75182709 | 0.080 | 0.051 | 0.588 | — |
| chr17_75182724_C_A | chr17:75182724 | -0.003 | 0.077 | 0.588 | <0.001% |
| chr17_75182756_C_T | chr17:75182756 | 0.020 | 0.070 | 0.588 | — |
| chr17_75182802_C_A | chr17:75182802 | 0.003 | 0.081 | 0.588 | — |
| chr17_75182755_C_A | chr17:75182755 | 0.040 | 0.060 | 0.582 | — |
| chr17_75182778_C_T | chr17:75182778 | -0.007 | 0.065 | 0.582 | <0.001% |
| chr17_75182785_C_A | chr17:75182785 | 0.017 | 0.084 | 0.582 | — |
| chr17_75189412_G_C | chr17:75189412 | -0.102 | -0.463 | -0.582 | — |
| chr17_75189372_T_A | chr17:75189372 | -0.154 | -0.168 | -0.579 | — |
| chr17_75182608_G_C | chr17:75182608 | 0.286 | 0.022 | 0.576 | — |
| chr17_75182684_C_A | chr17:75182684 | 0.040 | 0.063 | 0.576 | — |
| chr17_75182696_C_A | chr17:75182696 | 0.037 | 0.065 | 0.576 | — |
| chr17_75182729_A_G | chr17:75182729 | -0.045 | -0.048 | -0.576 | — |
| chr17_75182747_G_A | chr17:75182747 | 0.030 | 0.073 | 0.576 | — |
| chr17_75182772_C_T | chr17:75182772 | 0.017 | 0.065 | 0.576 | — |
| chr17_75182718_A_C | chr17:75182718 | 0.000 | -0.059 | -0.565 | — |
| chr17_75182740_G_T | chr17:75182740 | 0.043 | 0.063 | 0.565 | — |
| chr17_75182750_G_A | chr17:75182750 | 0.017 | 0.072 | 0.565 | — |
| chr17_75182751_G_A | chr17:75182751 | 0.010 | 0.070 | 0.565 | — |
| chr17_75182756_C_A | chr17:75182756 | 0.020 | 0.065 | 0.565 | — |
| chr17_75182779_G_T | chr17:75182779 | 0.007 | 0.088 | 0.565 | — |
| chr17_75182802_C_T | chr17:75182802 | 0.013 | 0.084 | 0.565 | — |
| chr17_75182745_T_G | chr17:75182745 | -0.027 | -0.049 | -0.559 | — |
| chr17_75189367_A_T | chr17:75189367 | -0.147 | -0.231 | -0.559 | — |
| chr17_75182700_C_T | chr17:75182700 | 0.037 | 0.055 | 0.553 | — |
| chr17_75182742_C_A | chr17:75182742 | 0.040 | 0.069 | 0.553 | — |
| chr17_75182769_G_T | chr17:75182769 | -0.033 | 0.058 | 0.553 | — |
| chr17_75182783_G_A | chr17:75182783 | 0.027 | 0.072 | 0.553 | — |
| chr17_75182784_G_A | chr17:75182784 | 0.033 | 0.079 | 0.553 | — |
| chr17_75182793_A_C | chr17:75182793 | -0.023 | -0.062 | -0.553 | — |
| chr17_75182741_G_T | chr17:75182741 | 0.000 | 0.064 | 0.547 | — |
| chr17_75189414_A_T | chr17:75189414 | -0.104 | -0.445 | -0.547 | — |
| chr17_75189418_G_C | chr17:75189418 | -0.158 | -0.524 | -0.544 | 3.54% |
| chr17_75182712_C_A | chr17:75182712 | 0.063 | 0.051 | 0.541 | — |
| chr17_75182730_G_T | chr17:75182730 | 0.008 | 0.073 | 0.541 | — |
| chr17_75189420_A_T | chr17:75189420 | -0.075 | -0.423 | -0.541 | — |
| chr17_75182778_C_A | chr17:75182778 | 0.023 | 0.058 | 0.535 | — |
| chr17_75189413_A_T | chr17:75189413 | -0.111 | -0.459 | -0.535 | — |
| chr17_75189370_C_T | chr17:75189370 | -0.142 | -0.244 | -0.532 | — |
| chr17_75182683_G_A | chr17:75182683 | 0.080 | 0.046 | 0.529 | — |
| chr17_75182708_G_A | chr17:75182708 | 0.087 | 0.044 | 0.529 | — |
| chr17_75182726_G_A | chr17:75182726 | 0.010 | 0.067 | 0.529 | 0.0053% |
| chr17_75182764_G_A | chr17:75182764 | 0.035 | 0.065 | 0.529 | — |
| chr17_75182781_G_T | chr17:75182781 | 0.017 | 0.071 | 0.529 | — |
| chr17_75182798_C_A | chr17:75182798 | 0.013 | 0.074 | 0.529 | — |
| chr17_75182799_C_A | chr17:75182799 | 0.023 | 0.064 | 0.529 | — |
| chr17_75189371_A_T | chr17:75189371 | -0.147 | -0.266 | -0.529 | — |
| chr17_75182643_A_G | chr17:75182643 | -0.040 | -0.003 | -0.524 | — |
| chr17_75189367_A_C | chr17:75189367 | -0.138 | -0.264 | -0.524 | — |
| chr17_75189369_T_C | chr17:75189369 | -0.170 | -0.236 | -0.521 | — |
| chr17_75182684_C_T | chr17:75182684 | 0.037 | 0.065 | 0.518 | — |
| chr17_75182698_G_T | chr17:75182698 | 0.007 | 0.065 | 0.518 | — |
| chr17_75182743_T_C | chr17:75182743 | -0.023 | -0.053 | -0.518 | — |
| chr17_75182749_C_T | chr17:75182749 | 0.020 | 0.067 | 0.518 | — |
| chr17_75182758_G_A | chr17:75182758 | 0.030 | 0.082 | 0.518 | — |
| chr17_75182771_C_T | chr17:75182771 | 0.023 | 0.068 | 0.518 | — |
| chr17_75182797_G_A | chr17:75182797 | 0.047 | 0.062 | 0.518 | — |
| chr17_75189351_G_C | chr17:75189351 | 0.114 | 0.183 | 0.518 | — |
| chr17_75189419_A_T | chr17:75189419 | -0.109 | -0.437 | -0.518 | — |
| chr17_75189443_A_G | chr17:75189443 | 0.151 | 0.198 | 0.518 | 0.0020% |
| chr17_75189444_C_G | chr17:75189444 | 0.089 | 0.145 | 0.518 | — |
| chr17_75189365_T_A | chr17:75189365 | -0.143 | -0.203 | -0.515 | — |
| chr17_75189418_G_T | chr17:75189418 | -0.048 | -0.503 | -0.515 | — |
| chr17_75182737_G_T | chr17:75182737 | 0.033 | 0.058 | 0.512 | — |
| chr17_75182776_A_C | chr17:75182776 | -0.080 | -0.043 | -0.512 | — |
| chr17_75189406_A_G | chr17:75189406 | 0.131 | 0.173 | 0.509 | — |
| chr17_75182616_G_A | chr17:75182616 | 0.050 | 0.034 | 0.506 | — |
| chr17_75182692_G_A | chr17:75182692 | 0.013 | 0.051 | 0.506 | — |
| chr17_75182693_C_T | chr17:75182693 | 0.027 | 0.047 | 0.506 | — |
| chr17_75182698_G_A | chr17:75182698 | 0.067 | 0.063 | 0.506 | — |
| chr17_75182711_G_A | chr17:75182711 | 0.063 | 0.048 | 0.506 | — |
| chr17_75182765_C_A | chr17:75182765 | 0.017 | 0.080 | 0.506 | — |
| chr17_75182766_C_T | chr17:75182766 | 0.023 | 0.060 | 0.506 | — |
| chr17_75182780_C_A | chr17:75182780 | -0.010 | 0.068 | 0.506 | — |
| chr17_75189365_T_G | chr17:75189365 | -0.137 | -0.218 | -0.506 | — |
| chr17_75189371_A_C | chr17:75189371 | -0.154 | -0.269 | -0.506 | — |
| chr17_75189413_A_G | chr17:75189413 | -0.111 | -0.470 | -0.506 | — |
| chr17_75189368_C_T | chr17:75189368 | -0.137 | -0.221 | -0.503 | — |
| chr17_75189370_C_G | chr17:75189370 | -0.140 | -0.266 | -0.497 | — |
| chr17_75182668_G_A | chr17:75182668 | 0.073 | 0.052 | 0.494 | — |
| chr17_75182693_C_A | chr17:75182693 | 0.017 | 0.060 | 0.494 | — |
| chr17_75182712_C_T | chr17:75182712 | 0.047 | 0.063 | 0.494 | — |
| chr17_75182723_G_T | chr17:75182723 | -0.027 | 0.066 | 0.494 | — |
| chr17_75182789_G_T | chr17:75182789 | 0.007 | 0.071 | 0.494 | — |
| chr17_75189413_A_C | chr17:75189413 | -0.108 | -0.463 | -0.494 | — |
| chr17_75189414_A_G | chr17:75189414 | -0.101 | -0.461 | -0.494 | — |
| chr17_75182609_A_C | chr17:75182609 | 0.017 | -0.070 | -0.488 | — |
| chr17_75182697_C_T | chr17:75182697 | 0.033 | 0.048 | 0.488 | — |
| chr17_75182714_C_A | chr17:75182714 | 0.033 | 0.067 | 0.488 | — |
| chr17_75189415_A_G | chr17:75189415 | -0.137 | -0.464 | -0.488 | — |
| chr17_75182608_G_A | chr17:75182608 | 0.020 | 0.100 | 0.482 | — |
| chr17_75182625_T_C | chr17:75182625 | -0.037 | -0.021 | -0.482 | — |
| chr17_75182695_G_T | chr17:75182695 | 0.023 | 0.058 | 0.482 | — |
| chr17_75182715_G_A | chr17:75182715 | 0.020 | 0.065 | 0.482 | — |
| chr17_75182722_C_T | chr17:75182722 | 0.005 | 0.065 | 0.482 | <0.001% |
| chr17_75182740_G_A | chr17:75182740 | 0.030 | 0.062 | 0.482 | — |
| chr17_75182779_G_A | chr17:75182779 | 0.013 | 0.052 | 0.482 | — |
| chr17_75182800_G_T | chr17:75182800 | -0.023 | 0.069 | 0.482 | <0.001% |
| chr17_75182725_T_C | chr17:75182725 | -0.010 | -0.037 | -0.476 | — |
| chr17_75182768_T_G | chr17:75182768 | -0.013 | -0.048 | -0.476 | — |
| chr17_75182785_C_T | chr17:75182785 | 0.040 | 0.070 | 0.476 | — |
| chr17_75189345_A_G | chr17:75189345 | 0.136 | 0.157 | 0.476 | — |
| chr17_75189367_A_G | chr17:75189367 | -0.129 | -0.231 | -0.476 | — |
| chr17_75189420_A_G | chr17:75189420 | -0.095 | -0.430 | -0.474 | — |
| chr17_75182692_G_T | chr17:75182692 | -0.003 | 0.058 | 0.471 | — |
| chr17_75182722_C_A | chr17:75182722 | 0.010 | 0.063 | 0.471 | <0.001% |
| chr17_75182734_G_T | chr17:75182734 | 0.020 | 0.062 | 0.471 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.