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GLDC
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near GLDC
chr9:6,432,466..6,745,729, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr9_6530701_G_A | chr9:6530701 | 1.000 | 1.000 | 1.000 | <0.001% |
| chr9_6609595_C_T | chr9:6609595 | 1.000 | 1.000 | 1.000 | <0.001% |
| chr9_6609649_G_T | chr9:6609649 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr9_6530707_C_G | chr9:6530707 | 1.000 | 1.000 | 1.000 | <0.001% |
| chr9_6609652_C_T | chr9:6609652 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr9_6609644_C_G | chr9:6609644 | -1.000 | -1.000 | -0.935 | <0.001% |
| chr9_6609686_G_C | chr9:6609686 | -1.000 | -1.000 | -1.000 | 0.0014% |
| chr9_6609686_G_A | chr9:6609686 | -0.930 | -1.000 | -0.994 | 0.0014% |
| chr9_6609626_A_C | chr9:6609626 | -0.884 | -0.924 | -1.000 | 0.025% |
| chr9_6609620_A_C | chr9:6609620 | -0.837 | -1.000 | -1.000 | 0.0020% |
| chr9_6609671_C_G | chr9:6609671 | 0.609 | 0.967 | 1.000 | <0.001% |
| chr9_6609714_G_A | chr9:6609714 | 0.589 | 0.459 | 0.300 | 0.108% |
| chr9_6609661_T_C | chr9:6609661 | 0.581 | 0.731 | 0.529 | <0.001% |
| chr9_6590994_C_G | chr9:6590994 | 0.527 | 0.650 | 0.388 | <0.001% |
| chr9_6530737_A_G | chr9:6530737 | 0.523 | 0.566 | 0.724 | <0.001% |
| chr9_6591019_T_C | chr9:6591019 | 0.502 | 0.365 | 0.388 | <0.001% |
| chr9_6609670_C_T | chr9:6609670 | 0.498 | 0.574 | 0.500 | 0.0020% |
| chr9_6591010_A_T | chr9:6591010 | -0.471 | -0.472 | -0.379 | 0.0039% |
| chr9_6609489_C_A | chr9:6609489 | 0.468 | 0.505 | 0.347 | 0.0033% |
| chr9_6609576_G_A | chr9:6609576 | 0.449 | 0.538 | 0.329 | 0.0013% |
| chr9_6530703_G_C | chr9:6530703 | -0.445 | -0.878 | -0.662 | 0.0013% |
| chr9_6609490_C_T | chr9:6609490 | 0.426 | 0.487 | 0.329 | 0.0033% |
| chr9_6530635_G_A | chr9:6530635 | 0.416 | 0.604 | 0.400 | 0.0033% |
| chr9_6609590_C_G | chr9:6609590 | 0.396 | 0.497 | 0.371 | 0.0013% |
| chr9_6609692_T_A | chr9:6609692 | -0.388 | -0.525 | -0.382 | <0.001% |
| chr9_6609637_C_G | chr9:6609637 | 0.378 | 0.368 | 0.294 | 0.084% |
| chr9_6609699_C_G | chr9:6609699 | 0.314 | 0.480 | 0.459 | <0.001% |
| chr9_6609628_C_T | chr9:6609628 | 0.309 | 0.411 | 0.441 | 20.5% |
| chr9_6609578_A_G | chr9:6609578 | -0.303 | -0.320 | -0.247 | 25.4% |
| chr9_6609696_C_A | chr9:6609696 | -0.296 | -0.386 | -0.188 | 0.0013% |
| chr9_6530719_T_C | chr9:6530719 | -0.292 | -0.586 | -0.203 | <0.001% |
| chr9_6591058_C_G | chr9:6591058 | 0.291 | 0.178 | 0.156 | <0.001% |
| chr9_6609712_C_A | chr9:6609712 | 0.285 | 0.216 | 0.035 | 0.0013% |
| chr9_6591018_A_G | chr9:6591018 | -0.278 | -0.066 | -0.300 | <0.001% |
| chr9_6609721_C_A | chr9:6609721 | -0.148 | -0.406 | -0.465 | <0.001% |
| chr9_6609542_T_C | chr9:6609542 | -0.253 | -0.203 | -0.206 | 0.147% |
| chr9_6530509_G_T | chr9:6530509 | 0.200 | 0.213 | 0.424 | 0.0013% |
| chr9_6530671_C_T | chr9:6530671 | -0.237 | -0.358 | -0.382 | <0.001% |
| chr9_6530441_A_T | chr9:6530441 | 0.120 | 0.487 | 0.406 | <0.001% |
| chr9_6609676_C_A | chr9:6609676 | -0.228 | -0.140 | 0.035 | <0.001% |
| chr9_6542874_A_T | chr9:6542874 | 0.198 | 0.447 | 0.397 | <0.001% |
| chr9_6591001_C_T | chr9:6591001 | -0.225 | -0.259 | -0.121 | <0.001% |
| chr9_6530690_C_T | chr9:6530690 | -0.221 | -0.452 | -0.382 | 0.0026% |
| chr9_6590966_A_C | chr9:6590966 | 0.221 | 0.312 | 0.194 | <0.001% |
| chr9_6530644_G_A | chr9:6530644 | -0.204 | -0.340 | -0.382 | <0.001% |
| chr9_6591034_C_T | chr9:6591034 | -0.216 | -0.185 | -0.147 | 0.018% |
| chr9_6609627_C_A | chr9:6609627 | -0.216 | -0.236 | -0.041 | <0.001% |
| chr9_6591011_C_T | chr9:6591011 | -0.215 | -0.208 | -0.176 | 1.13% |
| chr9_6609564_G_T | chr9:6609564 | 0.213 | 0.325 | 0.159 | <0.001% |
| chr9_6530688_C_A | chr9:6530688 | 0.210 | 0.348 | 0.124 | 0.0013% |
| chr9_6530698_G_C | chr9:6530698 | -0.207 | -0.424 | -0.253 | <0.001% |
| chr9_6609577_G_A | chr9:6609577 | 0.196 | 0.208 | 0.141 | <0.001% |
| chr9_6530619_C_T | chr9:6530619 | -0.196 | -0.350 | -0.312 | 0.0013% |
| chr9_6590996_T_C | chr9:6590996 | 0.195 | 0.185 | 0.065 | <0.001% |
| chr9_6609712_C_T | chr9:6609712 | -0.156 | -0.259 | -0.341 | <0.001% |
| chr9_6530463_A_G | chr9:6530463 | -0.074 | -0.127 | -0.338 | 0.0026% |
| chr9_6590891_T_C | chr9:6590891 | -0.190 | -0.142 | 0.068 | 0.0013% |
| chr9_6609629_C_T | chr9:6609629 | 0.168 | 0.231 | 0.335 | <0.001% |
| chr9_6591015_G_C | chr9:6591015 | -0.185 | -0.119 | -0.185 | <0.001% |
| chr9_6609685_C_T | chr9:6609685 | 0.185 | 0.312 | 0.276 | 0.0013% |
| chr9_6530634_G_A | chr9:6530634 | -0.105 | -0.284 | -0.324 | 17.7% |
| chr9_6530692_G_T | chr9:6530692 | -0.156 | -0.383 | -0.324 | <0.001% |
| chr9_6609620_A_G | chr9:6609620 | -0.183 | -0.208 | -0.118 | 0.023% |
| chr9_6609721_C_T | chr9:6609721 | 0.183 | -0.025 | -0.141 | <0.001% |
| chr9_6530647_C_G | chr9:6530647 | -0.182 | -0.320 | -0.265 | 0.0033% |
| chr9_6530482_G_A | chr9:6530482 | 0.131 | 0.282 | 0.312 | 0.0020% |
| chr9_6609599_A_G | chr9:6609599 | -0.173 | -0.289 | -0.176 | 0.0013% |
| chr9_6530658_T_C | chr9:6530658 | 0.164 | 0.317 | 0.218 | 0.0013% |
| chr9_6590984_T_C | chr9:6590984 | 0.161 | 0.025 | 0.171 | 0.0033% |
| chr9_6609451_T_A | chr9:6609451 | -0.161 | -0.206 | -0.135 | 0.0066% |
| chr9_6609534_G_A | chr9:6609534 | 0.160 | 0.178 | 0.041 | <0.001% |
| chr9_6530546_G_A | chr9:6530546 | -0.155 | -0.140 | -0.153 | <0.001% |
| chr9_6530932_C_T | chr9:6530932 | -0.082 | -0.095 | -0.274 | <0.001% |
| chr9_6530625_T_G | chr9:6530625 | -0.151 | -0.244 | 0.024 | <0.001% |
| chr9_6530631_C_T | chr9:6530631 | -0.114 | -0.231 | -0.265 | <0.001% |
| chr9_6591050_G_A | chr9:6591050 | -0.150 | -0.104 | -0.062 | <0.001% |
| chr9_6609633_G_A | chr9:6609633 | -0.146 | -0.140 | -0.129 | 0.0060% |
| chr9_6530481_C_T | chr9:6530481 | -0.145 | -0.249 | -0.071 | 0.0013% |
| chr9_6609606_C_T | chr9:6609606 | -0.140 | -0.157 | -0.082 | 0.0013% |
| chr9_6530571_A_C | chr9:6530571 | 0.025 | 0.175 | 0.241 | 0.0013% |
| chr9_6530774_C_A | chr9:6530774 | -0.136 | -0.211 | -0.200 | <0.001% |
| chr9_6590898_T_C | chr9:6590898 | 0.136 | 0.175 | 0.115 | <0.001% |
| chr9_6609704_G_T | chr9:6609704 | -0.135 | -0.261 | -0.224 | <0.001% |
| chr9_6609533_C_T | chr9:6609533 | -0.133 | -0.140 | -0.165 | 0.0026% |
| chr9_6609713_C_T | chr9:6609713 | -0.038 | 0.102 | 0.235 | 0.0026% |
| chr9_6530740_C_G | chr9:6530740 | 0.132 | 0.043 | 0.138 | <0.001% |
| chr9_6590609_A_G | chr9:6590609 | 0.043 | 0.061 | 0.229 | <0.001% |
| chr9_6530559_A_G | chr9:6530559 | -0.128 | -0.208 | -0.082 | <0.001% |
| chr9_6530743_T_C | chr9:6530743 | -0.077 | -0.264 | -0.224 | <0.001% |
| chr9_6590950_C_T | chr9:6590950 | -0.126 | -0.107 | -0.018 | <0.001% |
| chr9_6609473_C_G | chr9:6609473 | 0.126 | 0.109 | 0.159 | 0.0013% |
| chr9_6530685_C_T | chr9:6530685 | -0.033 | -0.076 | -0.218 | 0.0013% |
| chr9_6530708_C_G | chr9:6530708 | -0.121 | -0.211 | -0.106 | <0.001% |
| chr9_6530660_G_A | chr9:6530660 | 0.083 | 0.173 | 0.212 | 0.0013% |
| chr9_6552260_C_T | chr9:6552260 | -0.120 | -0.076 | -0.171 | <0.001% |
| chr9_6530638_G_A | chr9:6530638 | -0.118 | -0.327 | -0.112 | <0.001% |
| chr9_6530713_C_G | chr9:6530713 | -0.053 | -0.244 | -0.209 | <0.001% |
| chr9_6552217_G_T | chr9:6552217 | -0.116 | -0.025 | -0.153 | 0.0039% |
| chr9_6591012_T_C | chr9:6591012 | -0.116 | -0.063 | -0.091 | <0.001% |
| chr9_6590912_G_T | chr9:6590912 | 0.088 | -0.203 | 0.200 | <0.001% |
| chr9_6590953_C_A | chr9:6590953 | 0.113 | 0.099 | 0.132 | 0.0020% |
| chr9_6530368_C_A | chr9:6530368 | 0.076 | 0.129 | 0.197 | <0.001% |
| chr9_6552233_A_T | chr9:6552233 | -0.110 | -0.057 | -0.182 | 0.0020% |
| chr9_6590927_G_A | chr9:6590927 | -0.110 | -0.170 | -0.124 | 0.0020% |
| chr9_6609545_C_T | chr9:6609545 | -0.110 | -0.089 | -0.106 | 0.0013% |
| chr9_6530435_A_G | chr9:6530435 | -0.108 | -0.140 | -0.091 | 0.0013% |
| chr9_6530498_G_T | chr9:6530498 | -0.108 | -0.162 | -0.176 | <0.001% |
| chr9_6530926_G_A | chr9:6530926 | 0.108 | 0.067 | 0.156 | <0.001% |
| chr9_6530573_G_A | chr9:6530573 | -0.107 | -0.190 | -0.135 | 0.0013% |
| chr9_6530557_A_G | chr9:6530557 | 0.106 | 0.109 | 0.112 | <0.001% |
| chr9_6552211_G_C | chr9:6552211 | 0.100 | 0.014 | 0.188 | 0.0079% |
| chr9_6609559_T_C | chr9:6609559 | 0.106 | 0.142 | 0.082 | 0.082% |
| chr9_6577347_C_A | chr9:6577347 | 0.106 | 0.193 | 0.100 | <0.001% |
| chr9_6609454_G_T | chr9:6609454 | -0.105 | -0.071 | -0.071 | <0.001% |
| chr9_6530654_C_A | chr9:6530654 | -0.099 | -0.117 | -0.182 | 0.0033% |
| chr9_6542843_A_T | chr9:6542843 | -0.047 | -0.084 | -0.179 | 0.0062% |
| chr9_6552271_C_A | chr9:6552271 | -0.083 | -0.058 | -0.179 | <0.001% |
| chr9_6530711_G_A | chr9:6530711 | -0.053 | -0.168 | -0.176 | <0.001% |
| chr9_6530494_C_G | chr9:6530494 | -0.098 | -0.135 | -0.159 | <0.001% |
| chr9_6530402_C_A | chr9:6530402 | -0.097 | -0.124 | -0.165 | <0.001% |
| chr9_6530462_G_C | chr9:6530462 | -0.097 | -0.135 | -0.141 | 0.0026% |
| chr9_6530732_A_C | chr9:6530732 | 0.072 | 0.104 | 0.171 | <0.001% |
| chr9_6577339_T_A | chr9:6577339 | 0.082 | 0.114 | 0.171 | 0.0020% |
| chr9_6609566_G_C | chr9:6609566 | 0.097 | 0.109 | 0.059 | 0.0013% |
| chr9_6577087_G_A | chr9:6577087 | -0.023 | 0.046 | 0.168 | <0.001% |
| chr9_6591069_G_C | chr9:6591069 | 0.095 | 0.043 | 0.047 | 0.0033% |
| chr9_6609495_G_A | chr9:6609495 | 0.095 | 0.135 | 0.094 | <0.001% |
| chr9_6609623_C_G | chr9:6609623 | -0.052 | -0.023 | 0.165 | <0.001% |
| chr9_6609626_A_G | chr9:6609626 | 0.093 | 0.129 | 0.106 | <0.001% |
| chr9_6590908_T_A | chr9:6590908 | 0.015 | -0.282 | 0.147 | <0.001% |
| chr9_6542855_C_T | chr9:6542855 | -0.054 | -0.047 | -0.162 | <0.001% |
| chr9_6609497_C_G | chr9:6609497 | 0.092 | 0.091 | 0.059 | 0.013% |
| chr9_6609663_G_C | chr9:6609663 | -0.092 | -0.084 | -0.088 | <0.001% |
| chr9_6530839_C_A | chr9:6530839 | 0.091 | 0.107 | 0.129 | 0.030% |
| chr9_6530626_C_G | chr9:6530626 | -0.091 | -0.140 | 0.000 | 0.0020% |
| chr9_6530688_C_T | chr9:6530688 | -0.073 | -0.104 | -0.159 | 0.0039% |
| chr9_6542867_C_T | chr9:6542867 | -0.048 | -0.049 | -0.159 | 0.0064% |
| chr9_6542612_A_G | chr9:6542612 | 0.023 | -0.042 | 0.156 | 0.0013% |
| chr9_6530428_G_T | chr9:6530428 | -0.059 | -0.122 | -0.153 | 0.0020% |
| chr9_6530571_A_G | chr9:6530571 | -0.087 | -0.099 | -0.029 | 0.0026% |
| chr9_6530661_C_G | chr9:6530661 | -0.070 | -0.132 | -0.153 | 0.0013% |
| chr9_6609583_C_T | chr9:6609583 | -0.087 | -0.112 | -0.071 | 0.0026% |
| chr9_6609600_C_G | chr9:6609600 | 0.087 | 0.094 | 0.094 | 0.0013% |
| chr9_6530361_A_G | chr9:6530361 | -0.086 | -0.126 | -0.106 | <0.001% |
| chr9_6577267_G_A | chr9:6577267 | -0.027 | -0.046 | -0.150 | 0.0013% |
| chr9_6609463_C_G | chr9:6609463 | -0.085 | -0.119 | -0.041 | 0.629% |
| chr9_6530764_G_A | chr9:6530764 | -0.062 | -0.140 | -0.144 | <0.001% |
| chr9_6552109_T_C | chr9:6552109 | 0.049 | 0.051 | 0.144 | 0.676% |
| chr9_6530836_T_C | chr9:6530836 | 0.049 | 0.055 | 0.141 | <0.001% |
| chr9_6590878_C_A | chr9:6590878 | 0.067 | -0.127 | 0.141 | <0.001% |
| chr9_6591051_A_C | chr9:6591051 | 0.080 | 0.056 | 0.015 | <0.001% |
| chr9_6609683_C_G | chr9:6609683 | -0.080 | -0.025 | 0.059 | <0.001% |
| chr9_6530524_T_C | chr9:6530524 | -0.079 | -0.071 | -0.012 | 0.0026% |
| chr9_6530934_C_T | chr9:6530934 | 0.078 | 0.046 | 0.074 | 0.0046% |
| chr9_6530629_T_C | chr9:6530629 | -0.077 | -0.145 | -0.094 | <0.001% |
| chr9_6542808_C_T | chr9:6542808 | 0.077 | 0.143 | 0.132 | 0.0013% |
| chr9_6530753_T_C | chr9:6530753 | 0.015 | 0.094 | 0.135 | 0.0059% |
| chr9_6552257_C_T | chr9:6552257 | 0.077 | 0.034 | 0.065 | <0.001% |
| chr9_6590877_T_C | chr9:6590877 | -0.050 | -0.234 | 0.112 | <0.001% |
| chr9_6590954_T_G | chr9:6590954 | 0.077 | 0.063 | 0.024 | <0.001% |
| chr9_6590977_A_G | chr9:6590977 | 0.077 | 0.094 | 0.047 | 21.8% |
| chr9_6609588_G_T | chr9:6609588 | 0.077 | 0.086 | 0.041 | <0.001% |
| chr9_6609680_G_A | chr9:6609680 | -0.072 | -0.104 | -0.135 | <0.001% |
| chr9_6552193_G_A | chr9:6552193 | -0.076 | -0.041 | -0.071 | 0.0020% |
| chr9_6542898_A_G | chr9:6542898 | -0.020 | 0.005 | 0.132 | <0.001% |
| chr9_6591082_C_T | chr9:6591082 | -0.075 | -0.071 | -0.059 | <0.001% |
| chr9_6609444_C_G | chr9:6609444 | -0.075 | -0.079 | -0.035 | <0.001% |
| chr9_6530529_G_A | chr9:6530529 | -0.012 | -0.038 | -0.129 | 0.095% |
| chr9_6530532_A_C | chr9:6530532 | -0.055 | -0.041 | -0.129 | <0.001% |
| chr9_6609536_A_T | chr9:6609536 | -0.073 | -0.053 | -0.035 | 0.017% |
| chr9_6530419_A_T | chr9:6530419 | 0.073 | 0.094 | 0.124 | 0.0033% |
| chr9_6530481_C_A | chr9:6530481 | -0.072 | -0.069 | -0.035 | <0.001% |
| chr9_6530664_G_C | chr9:6530664 | 0.072 | 0.150 | 0.065 | <0.001% |
| chr9_6590868_C_T | chr9:6590868 | 0.072 | 0.107 | 0.009 | <0.001% |
| chr9_6530888_G_A | chr9:6530888 | 0.072 | 0.112 | 0.109 | <0.001% |
| chr9_6530914_A_C | chr9:6530914 | 0.052 | 0.070 | 0.126 | 0.0026% |
| chr9_6577091_G_A | chr9:6577091 | 0.014 | 0.005 | -0.126 | 0.0039% |
| chr9_6591055_A_T | chr9:6591055 | 0.072 | 0.076 | 0.009 | <0.001% |
| chr9_6530542_C_A | chr9:6530542 | -0.062 | -0.216 | 0.059 | <0.001% |
| chr9_6609415_G_T | chr9:6609415 | -0.065 | -0.079 | -0.124 | 0.0046% |
| chr9_6530564_C_A | chr9:6530564 | -0.068 | -0.096 | 0.000 | <0.001% |
| chr9_6530800_T_C | chr9:6530800 | 0.021 | 0.038 | 0.121 | 0.0020% |
| chr9_6542494_C_G | chr9:6542494 | 0.028 | 0.025 | 0.121 | 25.1% |
| chr9_6552016_C_A | chr9:6552016 | -0.004 | 0.016 | 0.121 | <0.001% |
| chr9_6590956_A_C | chr9:6590956 | 0.068 | 0.038 | -0.012 | 0.0013% |
| chr9_6530449_G_A | chr9:6530449 | 0.005 | 0.003 | 0.118 | 0.0013% |
| chr9_6530641_G_A | chr9:6530641 | -0.058 | -0.175 | -0.118 | 0.0039% |
| chr9_6609396_T_C | chr9:6609396 | 0.067 | 0.043 | 0.088 | 0.0053% |
| chr9_6609631_C_G | chr9:6609631 | -0.067 | -0.058 | 0.053 | <0.001% |
| chr9_6609639_T_C | chr9:6609639 | -0.067 | 0.005 | 0.100 | <0.001% |
| chr9_6530758_A_C | chr9:6530758 | -0.066 | -0.102 | 0.053 | <0.001% |
| chr9_6530398_G_A | chr9:6530398 | -0.065 | -0.043 | -0.071 | 0.0033% |
| chr9_6542824_T_C | chr9:6542824 | 0.051 | 0.071 | 0.115 | <0.001% |
| chr9_6591069_G_T | chr9:6591069 | 0.065 | 0.058 | 0.029 | 0.0059% |
| chr9_6530471_G_A | chr9:6530471 | -0.057 | -0.127 | -0.112 | 0.146% |
| chr9_6530502_T_C | chr9:6530502 | 0.033 | 0.038 | 0.112 | <0.001% |
| chr9_6530554_A_G | chr9:6530554 | 0.027 | 0.033 | 0.112 | 0.0020% |
| chr9_6530642_C_A | chr9:6530642 | -0.042 | -0.069 | -0.112 | 0.0013% |
| chr9_6552203_G_A | chr9:6552203 | -0.050 | -0.004 | -0.112 | <0.001% |
| chr9_6591106_C_A | chr9:6591106 | 0.063 | 0.063 | 0.035 | <0.001% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.