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GNPNAT1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near GNPNAT1
chr14:52,675,192..52,891,607, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr14_52695232_A_G | chr14:52695232 | 1.000 | 0.013 | 0.353 | — |
| chr14_52687835_G_C | chr14:52687835 | 0.586 | 0.449 | 0.541 | — |
| chr14_52695228_G_A | chr14:52695228 | 0.539 | 0.005 | 0.224 | — |
| chr14_52687860_A_C | chr14:52687860 | 0.494 | 0.485 | 0.524 | — |
| chr14_52695368_C_G | chr14:52695368 | -0.017 | 0.119 | 0.765 | — |
| chr14_52695264_A_T | chr14:52695264 | -0.023 | 0.155 | 0.718 | — |
| chr14_52687918_G_A | chr14:52687918 | 0.373 | 0.218 | 0.224 | — |
| chr14_52695231_C_G | chr14:52695231 | 0.356 | -0.023 | 0.071 | — |
| chr14_52695210_G_T | chr14:52695210 | 0.343 | 0.041 | 0.047 | — |
| chr14_52687888_A_C | chr14:52687888 | 0.296 | 0.201 | 0.365 | — |
| chr14_52695222_G_C | chr14:52695222 | 0.286 | 0.053 | 0.235 | — |
| chr14_52687861_G_C | chr14:52687861 | 0.285 | 0.272 | 0.265 | — |
| chr14_52687807_A_C | chr14:52687807 | 0.273 | 0.170 | 0.182 | — |
| chr14_52687835_G_T | chr14:52687835 | 0.251 | 0.198 | 0.235 | — |
| chr14_52687854_C_A | chr14:52687854 | 0.236 | 0.266 | 0.229 | — |
| chr14_52695252_C_T | chr14:52695252 | 0.113 | 0.147 | 0.412 | — |
| chr14_52695276_G_A | chr14:52695276 | 0.233 | -0.003 | 0.165 | — |
| chr14_52687790_T_C | chr14:52687790 | 0.227 | 0.104 | 0.276 | — |
| chr14_52687814_G_A | chr14:52687814 | -0.225 | -0.099 | -0.229 | — |
| chr14_52695341_C_T | chr14:52695341 | 0.223 | 0.008 | 0.094 | — |
| chr14_52687816_T_A | chr14:52687816 | -0.221 | -0.117 | -0.182 | — |
| chr14_52695367_C_G | chr14:52695367 | 0.203 | 0.096 | 0.388 | — |
| chr14_52695368_C_A | chr14:52695368 | 0.100 | 0.081 | 0.388 | — |
| chr14_52687816_T_G | chr14:52687816 | -0.218 | -0.117 | -0.171 | — |
| chr14_52695364_T_A | chr14:52695364 | 0.206 | 0.129 | 0.376 | — |
| chr14_52695366_A_G | chr14:52695366 | 0.093 | 0.091 | 0.376 | — |
| chr14_52695294_C_G | chr14:52695294 | 0.097 | 0.041 | 0.365 | — |
| chr14_52695367_C_A | chr14:52695367 | 0.136 | 0.084 | 0.365 | — |
| chr14_52687816_T_C | chr14:52687816 | -0.204 | -0.112 | -0.147 | — |
| chr14_52695231_C_T | chr14:52695231 | 0.203 | -0.013 | -0.047 | — |
| chr14_52687814_G_C | chr14:52687814 | -0.200 | -0.096 | -0.200 | <0.001% |
| chr14_52695366_A_T | chr14:52695366 | 0.133 | 0.089 | 0.341 | — |
| chr14_52695366_A_C | chr14:52695366 | 0.097 | 0.091 | 0.341 | — |
| chr14_52687815_A_G | chr14:52687815 | -0.191 | -0.076 | -0.171 | <0.001% |
| chr14_52687814_G_T | chr14:52687814 | -0.191 | -0.089 | -0.206 | — |
| chr14_52687815_A_T | chr14:52687815 | -0.186 | -0.084 | -0.165 | — |
| chr14_52687798_C_G | chr14:52687798 | -0.184 | -0.091 | -0.206 | — |
| chr14_52687788_G_T | chr14:52687788 | -0.178 | -0.107 | -0.159 | — |
| chr14_52687815_A_C | chr14:52687815 | -0.178 | -0.084 | -0.118 | — |
| chr14_52695308_G_T | chr14:52695308 | 0.176 | 0.005 | 0.153 | — |
| chr14_52687788_G_C | chr14:52687788 | -0.173 | -0.107 | -0.141 | — |
| chr14_52687804_A_G | chr14:52687804 | 0.173 | 0.008 | 0.094 | — |
| chr14_52695363_C_G | chr14:52695363 | 0.097 | 0.088 | 0.306 | — |
| chr14_52687800_A_C | chr14:52687800 | -0.172 | -0.119 | -0.206 | — |
| chr14_52695204_A_C | chr14:52695204 | 0.170 | -0.043 | 0.071 | — |
| chr14_52695367_C_T | chr14:52695367 | 0.170 | 0.076 | 0.235 | — |
| chr14_52695209_A_T | chr14:52695209 | 0.097 | 0.058 | 0.294 | — |
| chr14_52695368_C_T | chr14:52695368 | 0.053 | 0.063 | 0.294 | — |
| chr14_52687798_C_A | chr14:52687798 | -0.166 | -0.079 | -0.206 | — |
| chr14_52687832_G_C | chr14:52687832 | 0.162 | 0.137 | 0.171 | — |
| chr14_52695268_G_C | chr14:52695268 | 0.160 | 0.122 | 0.271 | — |
| chr14_52695336_G_T | chr14:52695336 | 0.160 | 0.084 | 0.129 | — |
| chr14_52695228_G_T | chr14:52695228 | 0.156 | 0.117 | 0.200 | — |
| chr14_52687788_G_A | chr14:52687788 | -0.156 | -0.091 | -0.153 | <0.001% |
| chr14_52695340_C_A | chr14:52695340 | 0.153 | 0.030 | 0.118 | — |
| chr14_52695340_C_G | chr14:52695340 | 0.153 | 0.010 | 0.094 | — |
| chr14_52695363_C_A | chr14:52695363 | 0.126 | 0.079 | 0.271 | — |
| chr14_52687800_A_T | chr14:52687800 | -0.152 | -0.084 | -0.165 | — |
| chr14_52687797_C_G | chr14:52687797 | -0.151 | -0.061 | -0.159 | — |
| chr14_52695341_C_G | chr14:52695341 | 0.150 | 0.013 | 0.106 | — |
| chr14_52687797_C_T | chr14:52687797 | -0.147 | -0.056 | -0.168 | — |
| chr14_52695290_T_C | chr14:52695290 | -0.146 | -0.036 | -0.094 | — |
| chr14_52695364_T_G | chr14:52695364 | 0.140 | 0.112 | 0.259 | — |
| chr14_52687799_A_G | chr14:52687799 | -0.146 | -0.074 | -0.153 | — |
| chr14_52687817_A_G | chr14:52687817 | -0.144 | -0.041 | -0.088 | <0.001% |
| chr14_52695223_C_G | chr14:52695223 | -0.143 | 0.018 | -0.012 | — |
| chr14_52687813_A_G | chr14:52687813 | -0.141 | -0.069 | -0.094 | — |
| chr14_52687798_C_T | chr14:52687798 | -0.140 | -0.079 | -0.206 | — |
| chr14_52687835_G_A | chr14:52687835 | 0.140 | 0.114 | 0.135 | — |
| chr14_52695218_C_T | chr14:52695218 | 0.030 | 0.058 | 0.247 | — |
| chr14_52695340_C_T | chr14:52695340 | 0.140 | 0.018 | 0.012 | 0.0013% |
| chr14_52687818_A_C | chr14:52687818 | -0.138 | -0.058 | -0.106 | — |
| chr14_52687818_A_G | chr14:52687818 | -0.138 | -0.058 | -0.118 | — |
| chr14_52687796_G_A | chr14:52687796 | -0.137 | -0.089 | -0.165 | — |
| chr14_52695243_A_G | chr14:52695243 | -0.136 | 0.008 | -0.035 | — |
| chr14_52687789_G_T | chr14:52687789 | -0.135 | -0.063 | -0.112 | — |
| chr14_52687797_C_A | chr14:52687797 | -0.135 | -0.061 | -0.147 | — |
| chr14_52695275_C_T | chr14:52695275 | -0.080 | -0.038 | -0.235 | — |
| chr14_52695339_C_T | chr14:52695339 | 0.133 | 0.013 | 0.024 | — |
| chr14_52687823_G_A | chr14:52687823 | -0.130 | -0.061 | -0.159 | — |
| chr14_52695192_C_G | chr14:52695192 | 0.130 | 0.041 | 0.071 | — |
| chr14_52687799_A_C | chr14:52687799 | -0.126 | -0.066 | -0.141 | — |
| chr14_52687820_A_C | chr14:52687820 | 0.119 | 0.074 | 0.224 | — |
| chr14_52695309_G_T | chr14:52695309 | 0.000 | 0.038 | 0.224 | — |
| chr14_52687823_G_C | chr14:52687823 | -0.126 | -0.066 | -0.165 | — |
| chr14_52687789_G_C | chr14:52687789 | -0.123 | -0.063 | -0.100 | — |
| chr14_52695238_A_C | chr14:52695238 | -0.123 | 0.000 | -0.118 | — |
| chr14_52695278_A_C | chr14:52695278 | -0.123 | -0.036 | -0.200 | — |
| chr14_52695337_G_A | chr14:52695337 | 0.123 | 0.036 | 0.012 | — |
| chr14_52687787_T_C | chr14:52687787 | -0.122 | -0.061 | -0.112 | — |
| chr14_52687818_A_T | chr14:52687818 | -0.122 | -0.053 | -0.129 | — |
| chr14_52687786_T_A | chr14:52687786 | -0.121 | -0.051 | -0.124 | — |
| chr14_52687826_C_G | chr14:52687826 | 0.120 | 0.094 | 0.176 | — |
| chr14_52695341_C_A | chr14:52695341 | 0.120 | -0.013 | -0.071 | — |
| chr14_52695363_C_T | chr14:52695363 | 0.116 | 0.076 | 0.212 | — |
| chr14_52687787_T_A | chr14:52687787 | -0.117 | -0.063 | -0.106 | — |
| chr14_52695337_G_C | chr14:52695337 | 0.116 | 0.020 | 0.035 | — |
| chr14_52687817_A_C | chr14:52687817 | -0.114 | -0.018 | -0.065 | — |
| chr14_52687838_C_A | chr14:52687838 | 0.114 | 0.104 | 0.006 | — |
| chr14_52687884_C_G | chr14:52687884 | 0.113 | 0.124 | 0.147 | — |
| chr14_52695237_C_G | chr14:52695237 | -0.113 | 0.013 | 0.094 | — |
| chr14_52695263_G_C | chr14:52695263 | 0.103 | 0.063 | 0.200 | — |
| chr14_52695272_G_T | chr14:52695272 | 0.003 | 0.051 | 0.200 | — |
| chr14_52695365_C_G | chr14:52695365 | 0.017 | 0.096 | 0.200 | — |
| chr14_52687860_A_T | chr14:52687860 | 0.111 | 0.094 | 0.129 | — |
| chr14_52687786_T_G | chr14:52687786 | -0.111 | -0.061 | -0.129 | — |
| chr14_52687868_C_T | chr14:52687868 | 0.111 | 0.069 | 0.024 | — |
| chr14_52695288_G_C | chr14:52695288 | -0.110 | 0.005 | -0.071 | — |
| chr14_52695339_C_G | chr14:52695339 | 0.110 | 0.009 | 0.047 | — |
| chr14_52687787_T_G | chr14:52687787 | -0.108 | -0.063 | -0.094 | — |
| chr14_52687796_G_C | chr14:52687796 | -0.108 | -0.071 | -0.100 | — |
| chr14_52695236_G_C | chr14:52695236 | -0.106 | 0.003 | -0.059 | — |
| chr14_52695265_G_C | chr14:52695265 | 0.080 | 0.086 | 0.188 | — |
| chr14_52695277_C_G | chr14:52695277 | -0.106 | -0.005 | -0.047 | — |
| chr14_52695294_C_A | chr14:52695294 | 0.023 | 0.051 | 0.188 | — |
| chr14_52695299_A_C | chr14:52695299 | -0.040 | -0.046 | -0.188 | — |
| chr14_52695305_T_C | chr14:52695305 | -0.043 | -0.038 | -0.188 | — |
| chr14_52695361_C_G | chr14:52695361 | -0.023 | -0.008 | 0.188 | — |
| chr14_52687819_G_T | chr14:52687819 | -0.106 | -0.041 | -0.082 | — |
| chr14_52687853_C_G | chr14:52687853 | 0.103 | 0.069 | 0.088 | 0.0033% |
| chr14_52695224_C_A | chr14:52695224 | -0.103 | -0.008 | -0.047 | — |
| chr14_52695199_A_C | chr14:52695199 | 0.020 | -0.043 | -0.176 | — |
| chr14_52695205_A_T | chr14:52695205 | 0.100 | 0.018 | 0.047 | — |
| chr14_52695219_C_A | chr14:52695219 | 0.037 | 0.030 | 0.176 | — |
| chr14_52695227_C_T | chr14:52695227 | 0.067 | 0.046 | 0.176 | — |
| chr14_52695267_T_C | chr14:52695267 | 0.017 | 0.018 | 0.176 | — |
| chr14_52695353_G_C | chr14:52695353 | -0.030 | -0.015 | -0.176 | 0.0039% |
| chr14_52687822_G_T | chr14:52687822 | 0.099 | 0.096 | 0.112 | — |
| chr14_52687799_A_T | chr14:52687799 | -0.097 | -0.046 | -0.112 | <0.001% |
| chr14_52695187_G_C | chr14:52695187 | 0.097 | 0.008 | 0.059 | — |
| chr14_52695272_G_C | chr14:52695272 | -0.097 | -0.013 | -0.106 | — |
| chr14_52695335_G_A | chr14:52695335 | 0.097 | 0.041 | 0.071 | 0.0020% |
| chr14_52695342_T_G | chr14:52695342 | 0.097 | 0.003 | -0.071 | — |
| chr14_52687826_C_A | chr14:52687826 | 0.095 | 0.076 | 0.159 | — |
| chr14_52687795_G_T | chr14:52687795 | 0.094 | 0.041 | 0.129 | — |
| chr14_52687822_G_C | chr14:52687822 | 0.094 | 0.066 | 0.100 | — |
| chr14_52695202_C_A | chr14:52695202 | -0.027 | -0.003 | -0.165 | — |
| chr14_52695204_A_T | chr14:52695204 | 0.093 | -0.018 | 0.000 | — |
| chr14_52695207_C_T | chr14:52695207 | 0.093 | 0.053 | 0.024 | — |
| chr14_52695236_G_T | chr14:52695236 | -0.083 | -0.013 | -0.165 | — |
| chr14_52695237_C_A | chr14:52695237 | -0.093 | 0.013 | 0.012 | — |
| chr14_52695262_A_G | chr14:52695262 | 0.033 | 0.043 | 0.165 | — |
| chr14_52695267_T_G | chr14:52695267 | 0.020 | 0.003 | 0.165 | — |
| chr14_52695271_A_C | chr14:52695271 | 0.000 | -0.030 | -0.165 | — |
| chr14_52695300_G_T | chr14:52695300 | 0.000 | -0.003 | 0.165 | — |
| chr14_52695342_T_A | chr14:52695342 | 0.093 | 0.027 | -0.024 | — |
| chr14_52687884_C_T | chr14:52687884 | 0.092 | 0.119 | 0.124 | 0.0026% |
| chr14_52687830_T_C | chr14:52687830 | 0.090 | 0.046 | 0.106 | — |
| chr14_52687879_G_A | chr14:52687879 | 0.090 | 0.053 | -0.018 | — |
| chr14_52687896_A_C | chr14:52687896 | -0.015 | -0.025 | 0.159 | — |
| chr14_52695295_C_T | chr14:52695295 | 0.090 | 0.062 | 0.118 | — |
| chr14_52687813_A_C | chr14:52687813 | -0.089 | -0.048 | -0.059 | — |
| chr14_52687819_G_A | chr14:52687819 | -0.087 | -0.033 | -0.059 | — |
| chr14_52695222_G_A | chr14:52695222 | -0.087 | 0.005 | -0.094 | — |
| chr14_52695223_C_T | chr14:52695223 | -0.087 | 0.033 | 0.047 | — |
| chr14_52695224_C_G | chr14:52695224 | -0.087 | -0.036 | -0.094 | — |
| chr14_52695232_A_C | chr14:52695232 | -0.087 | -0.038 | -0.118 | — |
| chr14_52695233_G_C | chr14:52695233 | -0.087 | 0.005 | -0.035 | <0.001% |
| chr14_52695233_G_T | chr14:52695233 | -0.087 | -0.010 | -0.059 | — |
| chr14_52695234_C_A | chr14:52695234 | -0.087 | -0.010 | -0.118 | — |
| chr14_52695241_G_T | chr14:52695241 | 0.043 | 0.071 | 0.153 | — |
| chr14_52695251_T_C | chr14:52695251 | -0.007 | 0.008 | -0.153 | — |
| chr14_52695268_G_T | chr14:52695268 | 0.027 | 0.048 | 0.153 | <0.001% |
| chr14_52695272_G_A | chr14:52695272 | -0.057 | -0.018 | -0.153 | — |
| chr14_52695309_G_C | chr14:52695309 | 0.050 | -0.005 | 0.153 | — |
| chr14_52695314_G_A | chr14:52695314 | -0.043 | -0.081 | -0.153 | — |
| chr14_52695338_A_G | chr14:52695338 | 0.087 | 0.003 | 0.035 | — |
| chr14_52695339_C_A | chr14:52695339 | 0.087 | 0.015 | 0.035 | — |
| chr14_52695357_A_G | chr14:52695357 | -0.050 | -0.053 | -0.153 | — |
| chr14_52687793_A_G | chr14:52687793 | -0.085 | -0.033 | -0.112 | — |
| chr14_52687806_T_C | chr14:52687806 | 0.085 | 0.033 | 0.071 | — |
| chr14_52687860_A_G | chr14:52687860 | -0.085 | -0.048 | -0.071 | — |
| chr14_52687885_T_G | chr14:52687885 | 0.032 | 0.043 | 0.147 | — |
| chr14_52695190_G_T | chr14:52695190 | 0.083 | 0.023 | -0.059 | — |
| chr14_52695191_C_T | chr14:52695191 | 0.083 | 0.030 | 0.024 | — |
| chr14_52687789_G_A | chr14:52687789 | -0.082 | -0.028 | -0.082 | — |
| chr14_52687867_A_C | chr14:52687867 | 0.082 | 0.063 | 0.129 | — |
| chr14_52687817_A_T | chr14:52687817 | -0.080 | -0.013 | -0.029 | — |
| chr14_52695190_G_A | chr14:52695190 | -0.013 | -0.020 | -0.141 | — |
| chr14_52695193_C_A | chr14:52695193 | 0.073 | 0.069 | 0.141 | — |
| chr14_52695197_C_T | chr14:52695197 | 0.033 | 0.010 | -0.141 | — |
| chr14_52695201_G_C | chr14:52695201 | -0.080 | -0.033 | -0.129 | — |
| chr14_52695206_G_C | chr14:52695206 | -0.037 | 0.003 | -0.141 | — |
| chr14_52695224_C_T | chr14:52695224 | -0.080 | -0.013 | -0.047 | — |
| chr14_52695227_C_G | chr14:52695227 | -0.043 | 0.013 | 0.141 | — |
| chr14_52695230_G_T | chr14:52695230 | -0.017 | 0.056 | 0.141 | — |
| chr14_52695232_A_T | chr14:52695232 | 0.010 | -0.020 | -0.141 | — |
| chr14_52695235_A_C | chr14:52695235 | -0.080 | -0.020 | -0.024 | — |
| chr14_52695247_T_G | chr14:52695247 | 0.080 | -0.003 | 0.024 | — |
| chr14_52695280_C_G | chr14:52695280 | 0.080 | -0.010 | 0.059 | — |
| chr14_52695323_G_A | chr14:52695323 | -0.017 | 0.038 | 0.141 | <0.001% |
| chr14_52695328_G_T | chr14:52695328 | 0.043 | -0.003 | -0.141 | — |
| chr14_52695334_C_A | chr14:52695334 | 0.043 | 0.038 | 0.141 | — |
| chr14_52695342_T_C | chr14:52695342 | -0.030 | -0.003 | -0.141 | — |
| chr14_52695358_C_T | chr14:52695358 | 0.003 | 0.030 | 0.141 | — |
| chr14_52687800_A_G | chr14:52687800 | -0.078 | -0.053 | -0.094 | — |
| chr14_52687825_C_G | chr14:52687825 | 0.078 | 0.051 | 0.106 | — |
| chr14_52687831_T_G | chr14:52687831 | 0.078 | 0.046 | 0.088 | — |
| chr14_52687832_G_T | chr14:52687832 | 0.078 | 0.086 | 0.094 | — |
| chr14_52687834_G_C | chr14:52687834 | 0.078 | 0.058 | 0.088 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.