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HDHD3
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near HDHD3
chr9:113,273,415..113,476,986, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr9_113376758_A_G | chr9:113376758 | 0.634 | 0.542 | 0.588 | — |
| chr9_113376796_T_A | chr9:113376796 | 0.624 | 0.461 | 0.624 | — |
| chr9_113275692_C_T | chr9:113275692 | 0.037 | 0.053 | -0.659 | <0.001% |
| chr9_113275578_C_G | chr9:113275578 | -0.093 | 0.010 | 0.647 | — |
| chr9_113376762_G_A | chr9:113376762 | 0.354 | 0.322 | 0.353 | — |
| chr9_113275578_C_A | chr9:113275578 | -0.045 | -0.056 | 0.624 | — |
| chr9_113376781_C_G | chr9:113376781 | 0.062 | 0.211 | 0.594 | — |
| chr9_113275646_C_T | chr9:113275646 | -0.183 | -0.058 | -0.576 | — |
| chr9_113275678_G_A | chr9:113275678 | -0.047 | -0.041 | 0.576 | — |
| chr9_113275645_T_C | chr9:113275645 | -0.185 | -0.056 | -0.541 | — |
| chr9_113376780_C_A | chr9:113376780 | -0.047 | 0.181 | 0.512 | — |
| chr9_113275681_C_T | chr9:113275681 | -0.057 | -0.033 | 0.506 | 0.225% |
| chr9_113275629_T_A | chr9:113275629 | -0.280 | -0.074 | -0.094 | <0.001% |
| chr9_113275646_C_A | chr9:113275646 | -0.156 | -0.028 | -0.494 | — |
| chr9_113275558_G_C | chr9:113275558 | -0.266 | -0.013 | -0.294 | — |
| chr9_113275647_C_T | chr9:113275647 | -0.123 | -0.048 | -0.471 | — |
| chr9_113376785_C_T | chr9:113376785 | -0.005 | -0.136 | -0.471 | — |
| chr9_113275514_C_A | chr9:113275514 | 0.261 | 0.094 | 0.000 | — |
| chr9_113376860_C_A | chr9:113376860 | 0.261 | 0.070 | 0.188 | — |
| chr9_113275527_T_G | chr9:113275527 | -0.260 | -0.107 | -0.035 | — |
| chr9_113275604_G_T | chr9:113275604 | 0.250 | 0.419 | 0.212 | <0.001% |
| chr9_113275724_T_A | chr9:113275724 | -0.003 | -0.046 | 0.435 | — |
| chr9_113275647_C_A | chr9:113275647 | -0.143 | -0.041 | -0.424 | — |
| chr9_113275647_C_G | chr9:113275647 | -0.108 | -0.030 | -0.424 | — |
| chr9_113275661_C_A | chr9:113275661 | 0.238 | 0.173 | 0.282 | — |
| chr9_113275524_A_G | chr9:113275524 | -0.236 | -0.081 | -0.176 | — |
| chr9_113275646_C_G | chr9:113275646 | -0.115 | -0.028 | -0.412 | — |
| chr9_113376804_C_A | chr9:113376804 | 0.168 | 0.176 | 0.412 | — |
| chr9_113376859_C_G | chr9:113376859 | 0.231 | -0.015 | 0.035 | — |
| chr9_113376782_T_A | chr9:113376782 | -0.053 | -0.098 | -0.406 | — |
| chr9_113275644_T_C | chr9:113275644 | -0.140 | -0.003 | -0.400 | — |
| chr9_113275645_T_A | chr9:113275645 | -0.165 | 0.005 | -0.400 | — |
| chr9_113275579_C_G | chr9:113275579 | -0.225 | -0.426 | 0.329 | — |
| chr9_113275688_C_G | chr9:113275688 | -0.221 | -0.051 | -0.047 | — |
| chr9_113275509_G_T | chr9:113275509 | -0.220 | -0.218 | -0.200 | — |
| chr9_113275654_T_A | chr9:113275654 | 0.126 | -0.145 | -0.388 | — |
| chr9_113275676_G_C | chr9:113275676 | -0.018 | -0.048 | 0.388 | — |
| chr9_113376768_C_G | chr9:113376768 | -0.220 | -0.084 | -0.165 | — |
| chr9_113275541_C_A | chr9:113275541 | 0.218 | 0.330 | 0.212 | — |
| chr9_113275672_C_G | chr9:113275672 | -0.215 | -0.079 | -0.071 | <0.001% |
| chr9_113275628_C_G | chr9:113275628 | -0.213 | -0.145 | 0.329 | — |
| chr9_113275649_G_A | chr9:113275649 | -0.088 | 0.010 | -0.376 | — |
| chr9_113275701_A_G | chr9:113275701 | -0.208 | -0.061 | -0.259 | — |
| chr9_113275560_C_G | chr9:113275560 | -0.070 | -0.109 | -0.365 | — |
| chr9_113275645_T_G | chr9:113275645 | -0.156 | -0.028 | -0.365 | — |
| chr9_113275648_T_A | chr9:113275648 | -0.175 | -0.010 | -0.365 | — |
| chr9_113275657_C_A | chr9:113275657 | -0.002 | -0.168 | -0.365 | — |
| chr9_113376768_C_A | chr9:113376768 | -0.206 | -0.069 | -0.047 | — |
| chr9_113275540_G_T | chr9:113275540 | 0.196 | 0.071 | 0.071 | <0.001% |
| chr9_113275557_C_T | chr9:113275557 | -0.196 | -0.155 | -0.247 | — |
| chr9_113376838_G_C | chr9:113376838 | 0.196 | 0.061 | 0.141 | — |
| chr9_113376838_G_T | chr9:113376838 | 0.196 | 0.115 | 0.141 | — |
| chr9_113275708_G_C | chr9:113275708 | 0.118 | 0.145 | 0.341 | 0.0013% |
| chr9_113376782_T_C | chr9:113376782 | -0.035 | -0.095 | -0.335 | — |
| chr9_113275620_G_A | chr9:113275620 | 0.188 | 0.381 | 0.188 | <0.001% |
| chr9_113275515_T_G | chr9:113275515 | 0.186 | 0.284 | 0.094 | — |
| chr9_113275518_T_A | chr9:113275518 | 0.155 | 0.020 | 0.329 | — |
| chr9_113275643_C_A | chr9:113275643 | 0.043 | 0.041 | -0.329 | — |
| chr9_113275643_C_G | chr9:113275643 | -0.092 | -0.038 | -0.329 | — |
| chr9_113275679_C_T | chr9:113275679 | 0.053 | 0.023 | 0.329 | <0.001% |
| chr9_113376785_C_A | chr9:113376785 | -0.053 | -0.066 | -0.329 | — |
| chr9_113275639_C_A | chr9:113275639 | 0.185 | -0.109 | -0.235 | — |
| chr9_113275640_G_T | chr9:113275640 | 0.183 | 0.053 | 0.082 | — |
| chr9_113275522_G_T | chr9:113275522 | -0.180 | -0.104 | -0.118 | — |
| chr9_113275654_T_G | chr9:113275654 | 0.180 | -0.173 | -0.282 | <0.001% |
| chr9_113275521_T_G | chr9:113275521 | 0.176 | 0.297 | 0.047 | — |
| chr9_113275509_G_A | chr9:113275509 | -0.175 | -0.246 | -0.165 | — |
| chr9_113275509_G_C | chr9:113275509 | -0.173 | -0.185 | -0.165 | — |
| chr9_113275676_G_A | chr9:113275676 | 0.063 | -0.023 | 0.306 | <0.001% |
| chr9_113275678_G_C | chr9:113275678 | 0.090 | 0.018 | 0.306 | — |
| chr9_113275541_C_G | chr9:113275541 | 0.170 | 0.206 | 0.106 | — |
| chr9_113275544_C_T | chr9:113275544 | 0.170 | 0.142 | 0.176 | <0.001% |
| chr9_113275664_C_G | chr9:113275664 | 0.170 | 0.063 | 0.271 | — |
| chr9_113275656_A_T | chr9:113275656 | 0.168 | -0.061 | -0.118 | — |
| chr9_113275559_C_A | chr9:113275559 | -0.088 | -0.043 | -0.294 | — |
| chr9_113275571_A_G | chr9:113275571 | 0.095 | -0.145 | 0.294 | — |
| chr9_113275679_C_A | chr9:113275679 | 0.131 | 0.015 | 0.294 | — |
| chr9_113275706_T_C | chr9:113275706 | 0.092 | 0.013 | 0.294 | — |
| chr9_113275709_G_A | chr9:113275709 | 0.018 | 0.028 | -0.294 | — |
| chr9_113275722_C_G | chr9:113275722 | -0.088 | -0.051 | -0.294 | — |
| chr9_113275722_C_T | chr9:113275722 | -0.070 | -0.028 | -0.294 | <0.001% |
| chr9_113275727_C_T | chr9:113275727 | -0.105 | -0.030 | 0.294 | — |
| chr9_113376763_A_G | chr9:113376763 | 0.077 | 0.099 | 0.294 | — |
| chr9_113275541_C_T | chr9:113275541 | 0.165 | 0.173 | 0.071 | — |
| chr9_113275579_C_A | chr9:113275579 | -0.165 | -0.297 | 0.153 | — |
| chr9_113275539_T_A | chr9:113275539 | -0.163 | -0.102 | -0.024 | — |
| chr9_113275663_T_C | chr9:113275663 | 0.161 | -0.023 | 0.047 | — |
| chr9_113275534_A_T | chr9:113275534 | -0.160 | -0.081 | -0.035 | — |
| chr9_113275560_C_T | chr9:113275560 | -0.015 | -0.010 | -0.282 | — |
| chr9_113275578_C_T | chr9:113275578 | -0.065 | -0.155 | 0.282 | — |
| chr9_113275642_A_T | chr9:113275642 | -0.033 | -0.058 | -0.282 | — |
| chr9_113275655_G_A | chr9:113275655 | 0.115 | -0.178 | -0.282 | — |
| chr9_113275660_A_T | chr9:113275660 | 0.078 | -0.096 | -0.282 | — |
| chr9_113275693_T_G | chr9:113275693 | 0.007 | 0.046 | 0.282 | <0.001% |
| chr9_113376787_C_A | chr9:113376787 | -0.023 | -0.076 | -0.282 | — |
| chr9_113376794_T_A | chr9:113376794 | 0.071 | 0.095 | 0.282 | — |
| chr9_113376798_T_C | chr9:113376798 | 0.157 | 0.096 | 0.212 | — |
| chr9_113376790_A_C | chr9:113376790 | 0.052 | 0.015 | 0.276 | — |
| chr9_113275537_G_C | chr9:113275537 | 0.106 | 0.041 | 0.271 | — |
| chr9_113275558_G_T | chr9:113275558 | -0.106 | -0.069 | -0.271 | — |
| chr9_113275603_G_T | chr9:113275603 | 0.103 | 0.069 | 0.271 | — |
| chr9_113275611_C_G | chr9:113275611 | -0.153 | -0.195 | -0.129 | — |
| chr9_113275680_G_A | chr9:113275680 | 0.077 | 0.030 | 0.271 | — |
| chr9_113275693_T_A | chr9:113275693 | 0.048 | 0.015 | 0.271 | <0.001% |
| chr9_113376801_C_A | chr9:113376801 | -0.005 | -0.074 | -0.271 | — |
| chr9_113376835_T_A | chr9:113376835 | 0.151 | 0.108 | 0.082 | — |
| chr9_113275717_T_G | chr9:113275717 | -0.150 | -0.056 | -0.235 | — |
| chr9_113376777_G_T | chr9:113376777 | 0.086 | 0.112 | 0.265 | — |
| chr9_113275557_C_A | chr9:113275557 | -0.148 | -0.076 | -0.247 | — |
| chr9_113275561_A_T | chr9:113275561 | -0.148 | -0.142 | -0.259 | — |
| chr9_113275606_G_A | chr9:113275606 | 0.148 | 0.261 | 0.141 | <0.001% |
| chr9_113275576_T_G | chr9:113275576 | 0.010 | -0.104 | 0.259 | — |
| chr9_113275583_A_T | chr9:113275583 | 0.010 | -0.211 | 0.259 | — |
| chr9_113275586_C_A | chr9:113275586 | 0.146 | -0.043 | 0.094 | — |
| chr9_113275657_C_T | chr9:113275657 | -0.068 | -0.107 | -0.259 | — |
| chr9_113275687_A_C | chr9:113275687 | -0.013 | -0.114 | 0.259 | — |
| chr9_113376801_C_T | chr9:113376801 | -0.067 | -0.011 | -0.259 | — |
| chr9_113275515_T_A | chr9:113275515 | 0.145 | 0.348 | 0.094 | — |
| chr9_113376764_A_C | chr9:113376764 | -0.144 | -0.102 | -0.071 | — |
| chr9_113275555_G_C | chr9:113275555 | -0.143 | -0.096 | -0.212 | 0.0013% |
| chr9_113275557_C_G | chr9:113275557 | -0.143 | -0.104 | -0.035 | — |
| chr9_113275712_T_G | chr9:113275712 | 0.143 | 0.051 | 0.224 | — |
| chr9_113376782_T_G | chr9:113376782 | 0.012 | -0.037 | -0.253 | — |
| chr9_113376767_C_T | chr9:113376767 | -0.142 | -0.003 | -0.094 | — |
| chr9_113275580_A_C | chr9:113275580 | -0.141 | -0.241 | 0.106 | — |
| chr9_113275535_G_C | chr9:113275535 | 0.140 | 0.127 | 0.059 | — |
| chr9_113275562_T_G | chr9:113275562 | -0.015 | -0.081 | -0.247 | — |
| chr9_113275576_T_C | chr9:113275576 | 0.070 | -0.076 | 0.247 | — |
| chr9_113275605_C_G | chr9:113275605 | 0.003 | -0.018 | -0.247 | — |
| chr9_113275649_G_C | chr9:113275649 | -0.125 | -0.036 | -0.247 | — |
| chr9_113275654_T_C | chr9:113275654 | 0.110 | -0.127 | -0.247 | — |
| chr9_113275659_C_G | chr9:113275659 | 0.073 | -0.074 | -0.247 | — |
| chr9_113275660_A_C | chr9:113275660 | 0.060 | -0.096 | -0.247 | — |
| chr9_113275661_C_G | chr9:113275661 | 0.005 | -0.038 | -0.247 | — |
| chr9_113275676_G_T | chr9:113275676 | 0.092 | -0.003 | 0.247 | — |
| chr9_113275679_C_G | chr9:113275679 | 0.035 | 0.015 | 0.247 | — |
| chr9_113275691_T_C | chr9:113275691 | -0.018 | -0.003 | 0.247 | — |
| chr9_113376761_C_G | chr9:113376761 | 0.067 | 0.055 | 0.247 | — |
| chr9_113376800_G_C | chr9:113376800 | 0.110 | 0.151 | 0.247 | — |
| chr9_113376809_G_A | chr9:113376809 | 0.075 | 0.042 | 0.247 | <0.001% |
| chr9_113376832_T_G | chr9:113376832 | 0.035 | 0.024 | 0.247 | — |
| chr9_113376844_T_A | chr9:113376844 | 0.012 | -0.010 | 0.247 | — |
| chr9_113376857_C_T | chr9:113376857 | 0.140 | 0.088 | 0.047 | — |
| chr9_113275525_G_A | chr9:113275525 | 0.138 | 0.084 | -0.012 | 0.0085% |
| chr9_113275612_C_G | chr9:113275612 | -0.135 | -0.218 | -0.035 | <0.001% |
| chr9_113275629_T_C | chr9:113275629 | -0.135 | -0.091 | 0.035 | <0.001% |
| chr9_113275545_T_A | chr9:113275545 | 0.133 | 0.102 | -0.035 | — |
| chr9_113275560_C_A | chr9:113275560 | -0.068 | 0.076 | -0.235 | — |
| chr9_113275603_G_C | chr9:113275603 | 0.072 | 0.003 | 0.235 | — |
| chr9_113275642_A_C | chr9:113275642 | 0.025 | -0.076 | -0.235 | — |
| chr9_113275659_C_A | chr9:113275659 | 0.052 | -0.102 | -0.235 | — |
| chr9_113275670_T_G | chr9:113275670 | 0.022 | 0.003 | 0.235 | — |
| chr9_113275680_G_C | chr9:113275680 | 0.065 | 0.063 | 0.235 | — |
| chr9_113275681_C_G | chr9:113275681 | 0.008 | 0.033 | 0.235 | — |
| chr9_113275695_A_C | chr9:113275695 | 0.125 | -0.038 | 0.235 | — |
| chr9_113275722_C_A | chr9:113275722 | 0.040 | 0.020 | -0.235 | — |
| chr9_113376783_G_C | chr9:113376783 | -0.033 | -0.060 | -0.235 | 33.9% |
| chr9_113376806_G_C | chr9:113376806 | 0.023 | 0.034 | 0.235 | — |
| chr9_113376836_A_G | chr9:113376836 | -0.072 | -0.030 | -0.235 | — |
| chr9_113376841_C_A | chr9:113376841 | -0.077 | -0.011 | -0.235 | — |
| chr9_113376768_C_T | chr9:113376768 | -0.132 | -0.047 | -0.059 | — |
| chr9_113275542_C_A | chr9:113275542 | 0.131 | 0.018 | 0.141 | — |
| chr9_113275545_T_C | chr9:113275545 | -0.131 | -0.030 | -0.047 | — |
| chr9_113275584_T_C | chr9:113275584 | 0.131 | 0.000 | 0.212 | <0.001% |
| chr9_113275655_G_T | chr9:113275655 | 0.128 | 0.010 | -0.071 | — |
| chr9_113275559_C_T | chr9:113275559 | -0.022 | 0.231 | -0.224 | 0.0026% |
| chr9_113275562_T_A | chr9:113275562 | -0.103 | -0.140 | -0.224 | — |
| chr9_113275577_T_G | chr9:113275577 | 0.040 | -0.102 | 0.224 | — |
| chr9_113275649_G_T | chr9:113275649 | -0.092 | 0.036 | -0.224 | — |
| chr9_113275701_A_C | chr9:113275701 | 0.023 | -0.030 | 0.224 | — |
| chr9_113275706_T_A | chr9:113275706 | 0.098 | 0.074 | 0.224 | — |
| chr9_113376784_A_T | chr9:113376784 | -0.033 | -0.062 | -0.224 | — |
| chr9_113376794_T_C | chr9:113376794 | 0.028 | 0.014 | 0.224 | — |
| chr9_113376797_A_T | chr9:113376797 | -0.126 | 0.016 | -0.165 | — |
| chr9_113376808_C_A | chr9:113376808 | 0.023 | 0.033 | 0.224 | — |
| chr9_113376813_G_T | chr9:113376813 | -0.035 | -0.070 | -0.224 | — |
| chr9_113376819_G_C | chr9:113376819 | 0.125 | 0.126 | 0.224 | — |
| chr9_113376833_C_A | chr9:113376833 | 0.126 | 0.047 | 0.047 | — |
| chr9_113275549_T_C | chr9:113275549 | 0.125 | 0.043 | -0.047 | <0.001% |
| chr9_113275700_G_T | chr9:113275700 | 0.125 | 0.023 | -0.082 | — |
| chr9_113376857_C_A | chr9:113376857 | 0.125 | 0.049 | 0.035 | — |
| chr9_113376857_C_G | chr9:113376857 | 0.125 | 0.023 | 0.035 | — |
| chr9_113275571_A_C | chr9:113275571 | 0.123 | -0.168 | 0.141 | — |
| chr9_113275637_G_C | chr9:113275637 | -0.123 | -0.081 | 0.035 | — |
| chr9_113275696_A_T | chr9:113275696 | 0.123 | 0.005 | 0.141 | — |
| chr9_113376845_G_A | chr9:113376845 | -0.123 | -0.071 | -0.129 | — |
| chr9_113376858_C_G | chr9:113376858 | 0.123 | 0.000 | 0.012 | — |
| chr9_113275628_C_A | chr9:113275628 | -0.121 | -0.058 | -0.071 | — |
| chr9_113376859_C_T | chr9:113376859 | 0.121 | 0.023 | -0.047 | — |
| chr9_113275555_G_A | chr9:113275555 | -0.093 | -0.015 | -0.212 | 0.025% |
| chr9_113275558_G_A | chr9:113275558 | -0.097 | -0.038 | -0.212 | — |
| chr9_113275586_C_G | chr9:113275586 | 0.090 | -0.112 | 0.212 | — |
| chr9_113275626_G_C | chr9:113275626 | -0.080 | -0.137 | -0.212 | — |
| chr9_113275641_C_A | chr9:113275641 | 0.080 | -0.041 | -0.212 | — |
| chr9_113275657_C_G | chr9:113275657 | -0.003 | -0.127 | -0.212 | — |
| chr9_113275668_T_C | chr9:113275668 | -0.045 | 0.119 | 0.212 | — |
| chr9_113275677_C_T | chr9:113275677 | 0.120 | 0.069 | 0.188 | — |
| chr9_113275688_C_T | chr9:113275688 | -0.052 | 0.008 | -0.212 | — |
| chr9_113275695_A_T | chr9:113275695 | 0.032 | -0.028 | 0.212 | — |
| chr9_113275704_G_C | chr9:113275704 | -0.048 | -0.015 | -0.212 | <0.001% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.