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HPCAL1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near HPCAL1
chr2:10,202,903..10,527,617, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr2_10270730_C_G | chr2:10270730 | 46,912 | 2,496 | 36,352 | — |
| chr2_10270730_C_T | chr2:10270730 | 36,672 | 2,688 | 31,488 | — |
| chr2_10270729_C_G | chr2:10270729 | 34,816 | 1,376 | 22,272 | — |
| chr2_10270730_C_A | chr2:10270730 | 30,144 | 2,112 | 48,640 | — |
| chr2_10270729_C_A | chr2:10270729 | 28,736 | 2,656 | 18,944 | — |
| chr2_10270780_G_A | chr2:10270780 | 27,904 | 6,464 | 10,496 | — |
| chr2_10270732_G_C | chr2:10270732 | -24,704 | -4,160 | -16,384 | — |
| chr2_10270729_C_T | chr2:10270729 | 20,544 | 1,728 | 15,872 | — |
| chr2_10270780_G_T | chr2:10270780 | 17,792 | 5,088 | 11,776 | — |
| chr2_10270773_T_A | chr2:10270773 | -17,664 | -5,760 | -12,288 | — |
| chr2_10270753_G_A | chr2:10270753 | -17,472 | -4,128 | -14,336 | 6.6e-6 |
| chr2_10270750_G_T | chr2:10270750 | -17,216 | -2,240 | -10,240 | — |
| chr2_10270776_G_T | chr2:10270776 | -15,296 | -4,256 | -13,056 | — |
| chr2_10270754_T_A | chr2:10270754 | 14,336 | 512 | 5,376 | — |
| chr2_10270742_G_C | chr2:10270742 | 14,272 | 1,856 | 13,824 | — |
| chr2_10270779_A_T | chr2:10270779 | -14,272 | -3,904 | -8,960 | — |
| chr2_10270732_G_T | chr2:10270732 | -14,080 | -2,016 | -8,448 | 2.6e-5 |
| chr2_10270749_G_A | chr2:10270749 | -14,016 | -2,208 | -7,680 | 6.6e-6 |
| chr2_10270733_T_G | chr2:10270733 | -13,888 | -640 | -9,472 | — |
| chr2_10270785_C_T | chr2:10270785 | -13,312 | -3,584 | -7,936 | 1.3e-5 |
| chr2_10270732_G_A | chr2:10270732 | -13,184 | -2,592 | -7,680 | 5.9e-5 |
| chr2_10270748_G_T | chr2:10270748 | -13,184 | -2,304 | -7,680 | — |
| chr2_10270750_G_A | chr2:10270750 | -12,672 | -2,400 | -8,448 | — |
| chr2_10270776_G_A | chr2:10270776 | -12,544 | -3,360 | -12,288 | — |
| chr2_10270756_C_G | chr2:10270756 | -12,288 | -1,920 | -9,984 | — |
| chr2_10270752_G_T | chr2:10270752 | -11,840 | -2,784 | -6,656 | — |
| chr2_10270776_G_C | chr2:10270776 | -11,520 | -3,488 | -9,984 | — |
| chr2_10270749_G_T | chr2:10270749 | -10,816 | -1,600 | -4,864 | — |
| chr2_10270777_G_T | chr2:10270777 | -10,752 | -2,048 | -8,448 | — |
| chr2_10270784_C_T | chr2:10270784 | -10,688 | -2,880 | -7,168 | — |
| chr2_10270784_C_G | chr2:10270784 | -10,624 | -2,592 | -4,608 | — |
| chr2_10270742_G_T | chr2:10270742 | 10,560 | 4,768 | 10,240 | — |
| chr2_10270736_G_C | chr2:10270736 | 10,368 | 1,632 | 9,472 | — |
| chr2_10270749_G_C | chr2:10270749 | -10,112 | -1,984 | -3,840 | — |
| chr2_10270775_G_C | chr2:10270775 | -10,112 | -2,656 | -7,680 | — |
| chr2_10270731_C_A | chr2:10270731 | 9,984 | -256 | 9,472 | — |
| chr2_10270737_C_G | chr2:10270737 | 9,984 | 1,536 | 7,936 | — |
| chr2_10270760_C_G | chr2:10270760 | -9,856 | -1,408 | -12,544 | — |
| chr2_10270781_T_A | chr2:10270781 | -9,792 | -3,296 | -4,608 | — |
| chr2_10270761_T_C | chr2:10270761 | 9,600 | 1,152 | 768 | — |
| chr2_10270785_C_G | chr2:10270785 | -9,344 | -1,696 | -1,536 | — |
| chr2_10270740_G_C | chr2:10270740 | 9,216 | 64 | 3,072 | — |
| chr2_10270748_G_C | chr2:10270748 | -9,088 | -1,792 | -6,144 | — |
| chr2_10270769_G_T | chr2:10270769 | -8,768 | -2,432 | -8,192 | — |
| chr2_10270752_G_A | chr2:10270752 | -8,640 | -1,728 | 512 | — |
| chr2_10270758_T_A | chr2:10270758 | -8,576 | -896 | -8,704 | — |
| chr2_10270782_T_G | chr2:10270782 | -8,576 | -1,888 | -2,304 | — |
| chr2_10270783_C_G | chr2:10270783 | -8,384 | -2,400 | -2,560 | — |
| chr2_10270739_A_G | chr2:10270739 | 8,320 | 2,272 | 3,072 | — |
| chr2_10270756_C_A | chr2:10270756 | -8,320 | -960 | -6,144 | — |
| chr2_10270778_A_T | chr2:10270778 | -8,192 | -1,824 | -9,216 | — |
| chr2_10270743_C_T | chr2:10270743 | -8,128 | -1,280 | -9,472 | — |
| chr2_10270743_C_G | chr2:10270743 | -8,128 | -1,920 | -8,704 | — |
| chr2_10270733_T_A | chr2:10270733 | -8,128 | -1,280 | -3,840 | — |
| chr2_10270736_G_T | chr2:10270736 | 8,064 | 672 | 4,608 | 3.3e-5 |
| chr2_10270757_T_A | chr2:10270757 | -8,000 | -1,632 | -7,424 | — |
| chr2_10270758_T_C | chr2:10270758 | -7,872 | -928 | -7,168 | — |
| chr2_10270784_C_A | chr2:10270784 | -7,744 | -1,280 | -3,584 | — |
| chr2_10270755_G_C | chr2:10270755 | -7,680 | -512 | -6,144 | 6.6e-6 |
| chr2_10270772_G_T | chr2:10270772 | -7,680 | -2,688 | -3,584 | — |
| chr2_10270760_C_A | chr2:10270760 | -7,552 | -736 | -10,496 | — |
| chr2_10270738_G_A | chr2:10270738 | -7,424 | -928 | -4,352 | 6.6e-6 |
| chr2_10270771_G_T | chr2:10270771 | -7,424 | -2,368 | -4,608 | 6.6e-6 |
| chr2_10270760_C_T | chr2:10270760 | -6,912 | -1,120 | -10,240 | — |
| chr2_10270783_C_A | chr2:10270783 | -6,912 | -2,880 | -5,888 | — |
| chr2_10270751_A_C | chr2:10270751 | 6,848 | 1,280 | 5,120 | — |
| chr2_10270778_A_C | chr2:10270778 | -6,720 | -896 | -3,840 | — |
| chr2_10270745_G_T | chr2:10270745 | -6,592 | -384 | -4,352 | — |
| chr2_10270773_T_G | chr2:10270773 | -6,592 | -1,024 | -2,560 | — |
| chr2_10270785_C_A | chr2:10270785 | -6,528 | -1,248 | -2,304 | — |
| chr2_10270738_G_T | chr2:10270738 | -6,400 | -1,248 | -4,096 | — |
| chr2_10270781_T_G | chr2:10270781 | -6,272 | -416 | -512 | — |
| chr2_10270783_C_T | chr2:10270783 | -6,272 | -1,152 | -4,096 | — |
| chr2_10270781_T_C | chr2:10270781 | -6,016 | -2,208 | -512 | — |
| chr2_10270782_T_A | chr2:10270782 | -6,016 | -1,568 | -5,120 | — |
| chr2_10270771_G_A | chr2:10270771 | -5,760 | -2,560 | -1,792 | — |
| chr2_10270745_G_C | chr2:10270745 | -5,504 | 224 | -2,560 | — |
| chr2_10270770_A_C | chr2:10270770 | 5,504 | -1,600 | -2,048 | — |
| chr2_10270748_G_A | chr2:10270748 | -5,376 | -576 | -4,352 | 6.6e-6 |
| chr2_10270765_C_A | chr2:10270765 | 5,312 | 2,240 | 4,352 | — |
| chr2_10270750_G_C | chr2:10270750 | -5,120 | -1,184 | -13,824 | 6.6e-6 |
| chr2_10270739_A_C | chr2:10270739 | 5,120 | 0 | 2,304 | — |
| chr2_10270768_A_C | chr2:10270768 | -5,120 | -2,208 | -4,096 | — |
| chr2_10270734_G_A | chr2:10270734 | -5,056 | -992 | -3,328 | — |
| chr2_10270734_G_C | chr2:10270734 | 5,056 | 704 | 4,608 | — |
| chr2_10270775_G_T | chr2:10270775 | -4,928 | -2,304 | -5,888 | — |
| chr2_10270757_T_C | chr2:10270757 | -4,864 | 0 | -3,584 | — |
| chr2_10270752_G_C | chr2:10270752 | -4,800 | -672 | -768 | — |
| chr2_10270739_A_T | chr2:10270739 | 4,672 | 928 | 3,328 | — |
| chr2_10270753_G_C | chr2:10270753 | -4,672 | -800 | -768 | — |
| chr2_10270755_G_T | chr2:10270755 | -4,608 | -960 | -4,352 | — |
| chr2_10270772_G_A | chr2:10270772 | -4,544 | -3,008 | -3,840 | — |
| chr2_10270774_T_C | chr2:10270774 | 4,288 | 3,872 | 7,168 | 6.6e-6 |
| chr2_10270741_G_C | chr2:10270741 | 4,288 | -960 | -256 | — |
| chr2_10270779_A_G | chr2:10270779 | -4,288 | -512 | -3,328 | — |
| chr2_10270757_T_G | chr2:10270757 | -4,160 | 96 | -3,840 | — |
| chr2_10270751_A_G | chr2:10270751 | -4,096 | 960 | -7,680 | — |
| chr2_10270774_T_G | chr2:10270774 | -4,096 | -576 | -6,400 | — |
| chr2_10270756_C_T | chr2:10270756 | -4,096 | -704 | -5,376 | — |
| chr2_10270744_A_C | chr2:10270744 | 4,096 | 544 | 4,864 | — |
| chr2_10270755_G_A | chr2:10270755 | -4,032 | 480 | -1,280 | — |
| chr2_10270764_G_T | chr2:10270764 | -3,968 | -480 | 256 | — |
| chr2_10270764_G_A | chr2:10270764 | -3,904 | -576 | -256 | — |
| chr2_10270758_T_G | chr2:10270758 | -3,712 | -640 | -5,120 | — |
| chr2_10270764_G_C | chr2:10270764 | -3,712 | -128 | -768 | 6.6e-6 |
| chr2_10270735_G_C | chr2:10270735 | 3,648 | -640 | 5,376 | — |
| chr2_10270737_C_T | chr2:10270737 | -3,648 | 160 | -3,328 | 2.2e-4 |
| chr2_10270765_C_T | chr2:10270765 | 3,584 | 2,336 | 256 | — |
| chr2_10270766_T_C | chr2:10270766 | -3,520 | 32 | 256 | — |
| chr2_10270772_G_C | chr2:10270772 | -3,520 | -1,184 | 256 | — |
| chr2_10270735_G_A | chr2:10270735 | 3,456 | -32 | 3,328 | 1.3e-5 |
| chr2_10270747_A_C | chr2:10270747 | -3,392 | -576 | -2,048 | — |
| chr2_10270765_C_G | chr2:10270765 | 3,328 | 3,904 | -2,816 | — |
| chr2_10270775_G_A | chr2:10270775 | -3,328 | 544 | -1,536 | — |
| chr2_10270734_G_T | chr2:10270734 | -3,264 | -608 | -512 | — |
| chr2_10270763_G_T | chr2:10270763 | -3,264 | -1,984 | -3,072 | — |
| chr2_10270770_A_G | chr2:10270770 | -3,264 | -544 | -2,304 | — |
| chr2_10270753_G_T | chr2:10270753 | -3,200 | -1,120 | -2,048 | — |
| chr2_10270767_T_C | chr2:10270767 | 3,072 | 1,408 | 2,304 | — |
| chr2_10238330_G_T | chr2:10238330 | 3,008 | 784 | -4,992 | — |
| chr2_10270754_T_C | chr2:10270754 | 2,944 | -32 | 3,584 | — |
| chr2_10270779_A_C | chr2:10270779 | -2,944 | -192 | -2,048 | — |
| chr2_10270782_T_C | chr2:10270782 | 2,816 | 1,056 | -5,120 | — |
| chr2_10270762_G_T | chr2:10270762 | -2,816 | -928 | -4,096 | — |
| chr2_10270745_G_A | chr2:10270745 | 2,816 | 1,568 | 2,816 | — |
| chr2_10270777_G_A | chr2:10270777 | -2,816 | 512 | 0 | — |
| chr2_10238379_A_T | chr2:10238379 | 2,752 | 544 | -3,072 | — |
| chr2_10270774_T_A | chr2:10270774 | -2,752 | -320 | -512 | — |
| chr2_10270741_G_A | chr2:10270741 | 2,688 | -1,120 | -1,792 | — |
| chr2_10270786_G_A | chr2:10270786 | 2,688 | 1,312 | 1,792 | 2.6e-5 |
| chr2_10270736_G_A | chr2:10270736 | 2,624 | 256 | 4,096 | — |
| chr2_10270747_A_G | chr2:10270747 | -2,496 | 320 | -3,072 | — |
| chr2_10270761_T_A | chr2:10270761 | 2,496 | 544 | -2,304 | — |
| chr2_10270744_A_T | chr2:10270744 | 2,432 | -192 | 1,024 | — |
| chr2_10238322_C_T | chr2:10238322 | -2,400 | -288 | 3,072 | — |
| chr2_10270738_G_C | chr2:10270738 | -2,368 | -32 | 1,280 | — |
| chr2_10270777_G_C | chr2:10270777 | -2,304 | -128 | -3,840 | — |
| chr2_10270746_A_T | chr2:10270746 | -2,304 | -256 | -512 | — |
| chr2_10264189_G_C | chr2:10264189 | 2,208 | 1,144 | 3,776 | — |
| chr2_10238300_C_A | chr2:10238300 | 2,176 | 512 | -4,992 | — |
| chr2_10270768_A_G | chr2:10270768 | 2,176 | 128 | 4,096 | — |
| chr2_10270763_G_A | chr2:10270763 | -1,984 | -1,696 | -1,792 | — |
| chr2_10238344_C_G | chr2:10238344 | 1,952 | 336 | -128 | — |
| chr2_10270771_G_C | chr2:10270771 | -1,920 | -2,080 | 512 | — |
| chr2_10270767_T_G | chr2:10270767 | 1,792 | 704 | 3,840 | — |
| chr2_10270746_A_G | chr2:10270746 | 1,728 | 128 | 1,792 | — |
| chr2_10270742_G_A | chr2:10270742 | 1,728 | -384 | 1,280 | — |
| chr2_10270769_G_A | chr2:10270769 | 1,728 | 1,344 | 1,536 | — |
| chr2_10270741_G_T | chr2:10270741 | 1,664 | -1,376 | -2,816 | — |
| chr2_10270744_A_G | chr2:10270744 | -1,600 | -1,312 | 7,680 | — |
| chr2_10270731_C_G | chr2:10270731 | -1,600 | -2,496 | -768 | — |
| chr2_10270759_C_G | chr2:10270759 | -1,536 | -608 | -6,144 | — |
| chr2_10238322_C_G | chr2:10238322 | -1,536 | -352 | 2,688 | — |
| chr2_10270763_G_C | chr2:10270763 | -1,408 | -1,696 | -2,560 | — |
| chr2_10270754_T_G | chr2:10270754 | -1,344 | -736 | -7,680 | — |
| chr2_10270740_G_A | chr2:10270740 | -1,344 | -1,600 | -3,328 | — |
| chr2_10270743_C_A | chr2:10270743 | -1,280 | -2,144 | -2,048 | — |
| chr2_10238363_G_C | chr2:10238363 | -1,184 | -656 | -8,064 | — |
| chr2_10270778_A_G | chr2:10270778 | -1,152 | 480 | -7,680 | — |
| chr2_10238296_C_G | chr2:10238296 | 1,088 | 240 | -2,688 | — |
| chr2_10238320_G_A | chr2:10238320 | 1,056 | 224 | -1,792 | — |
| chr2_10238320_G_T | chr2:10238320 | 1,024 | 224 | -2,176 | — |
| chr2_10238292_C_A | chr2:10238292 | 928 | 112 | -2,176 | — |
| chr2_10238386_T_A | chr2:10238386 | -864 | -96 | 1,792 | — |
| chr2_10270759_C_A | chr2:10270759 | 768 | -64 | -5,888 | — |
| chr2_10270770_A_T | chr2:10270770 | 768 | -1,568 | -3,840 | — |
| chr2_10238378_G_C | chr2:10238378 | 736 | 336 | 3,456 | — |
| chr2_10238368_T_C | chr2:10238368 | -704 | -208 | -4,608 | — |
| chr2_10238415_C_A | chr2:10238415 | -704 | 48 | -2,048 | — |
| chr2_10238359_C_A | chr2:10238359 | 672 | 272 | 2,944 | — |
| chr2_10238300_C_G | chr2:10238300 | 640 | 128 | -2,176 | — |
| chr2_10238318_G_A | chr2:10238318 | 640 | 80 | -2,176 | — |
| chr2_10270773_T_C | chr2:10270773 | 640 | -704 | 1,792 | — |
| chr2_10238365_C_G | chr2:10238365 | 576 | 0 | 1,920 | — |
| chr2_10238302_G_A | chr2:10238302 | 576 | 192 | -1,792 | — |
| chr2_10238386_T_G | chr2:10238386 | -576 | -144 | 1,792 | — |
| chr2_10264154_C_G | chr2:10264154 | 532 | 360 | 1,936 | — |
| chr2_10270762_G_C | chr2:10270762 | 512 | -992 | -4,096 | — |
| chr2_10270740_G_T | chr2:10270740 | -512 | -1,248 | -2,816 | — |
| chr2_10270731_C_T | chr2:10270731 | -512 | -1,632 | 2,304 | 2.0e-3 |
| chr2_10238386_T_C | chr2:10238386 | 480 | 48 | 1,920 | — |
| chr2_10238290_G_T | chr2:10238290 | 448 | 192 | -1,920 | — |
| chr2_10238354_G_T | chr2:10238354 | 384 | 304 | 6,016 | — |
| chr2_10270766_T_G | chr2:10270766 | -320 | 640 | -1,792 | — |
| chr2_10238362_C_A | chr2:10238362 | 288 | 208 | 1,920 | 6.6e-6 |
| chr2_10270759_C_T | chr2:10270759 | 256 | -352 | -5,888 | — |
| chr2_10238325_G_T | chr2:10238325 | -256 | 256 | -2,304 | — |
| chr2_10238328_A_C | chr2:10238328 | -256 | 0 | 2,048 | — |
| chr2_10270746_A_C | chr2:10270746 | 256 | 256 | 1,792 | — |
| chr2_10238362_C_G | chr2:10238362 | 224 | 208 | 2,048 | — |
| chr2_10270768_A_T | chr2:10270768 | -192 | -1,312 | -4,096 | — |
| chr2_10238360_A_C | chr2:10238360 | -192 | -112 | -1,920 | — |
| chr2_10238328_A_T | chr2:10238328 | -160 | 48 | 2,304 | — |
| chr2_10238299_G_A | chr2:10238299 | 160 | 16 | -2,048 | — |
| chr2_10238360_A_T | chr2:10238360 | -160 | 176 | 2,048 | — |
| chr2_10238318_G_C | chr2:10238318 | -96 | -32 | 2,048 | — |
| chr2_10238314_C_G | chr2:10238314 | -64 | -64 | 1,920 | — |
| chr2_10238361_C_A | chr2:10238361 | -32 | 192 | 1,920 | — |
| chr2_10238361_C_G | chr2:10238361 | 0 | 176 | 2,048 | — |
| chr2_10238377_G_A | chr2:10238377 | 0 | -16 | -2,048 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.