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HRAT5

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near HRAT5

chr5:169,555..371,524, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr5_218273_T_C	chr5:218273	-0.900	-0.398	-1.000	0.018%
chr5_218364_G_T	chr5:218364	0.599	0.124	0.376	0.0013%
chr5_218461_A_G	chr5:218461	-0.205	-0.223	-1.000	<0.001%
chr5_217684_C_A	chr5:217684	0.564	0.102	0.271	<0.001%
chr5_171365_G_A	chr5:171365	0.562	0.464	0.947	0.0013%
chr5_218829_T_G	chr5:218829	0.522	0.452	0.988	<0.001%
chr5_218451_G_T	chr5:218451	0.090	0.227	0.929	<0.001%
chr5_218211_G_A	chr5:218211	-0.022	0.096	0.906	0.0020%
chr5_198347_C_T	chr5:198347	0.290	0.329	0.894	<0.001%
chr5_188823_T_C	chr5:188823	0.275	0.038	0.871	<0.001%
chr5_218924_C_G	chr5:218924	0.007	-0.292	-0.871	<0.001%
chr5_218462_G_A	chr5:218462	0.077	0.206	0.859	<0.001%
chr5_218467_C_T	chr5:218467	-0.005	0.190	0.859	<0.001%
chr5_218445_G_A	chr5:218445	0.040	0.242	0.847	<0.001%
chr5_188710_G_C	chr5:188710	-0.468	-0.061	-0.647	0.0020%
chr5_218468_G_A	chr5:218468	0.050	0.180	0.812	<0.001%
chr5_171373_G_A	chr5:171373	0.412	0.445	0.800	<0.001%
chr5_218277_C_G	chr5:218277	-0.419	0.081	0.129	<0.001%
chr5_218278_C_T	chr5:218278	-0.419	0.140	0.353	<0.001%
chr5_218457_G_A	chr5:218457	0.078	0.165	0.741	0.0013%
chr5_171157_A_C	chr5:171157	-0.102	-0.161	-0.735	0.0013%
chr5_218271_C_T	chr5:218271	-0.416	0.084	0.318	0.0013%
chr5_218471_A_G	chr5:218471	-0.105	-0.147	-0.729	<0.001%
chr5_218365_G_T	chr5:218365	0.386	0.195	0.506	<0.001%
chr5_218275_C_T	chr5:218275	-0.384	0.142	0.341	0.020%
chr5_188768_A_G	chr5:188768	-0.384	-0.146	-0.447	<0.001%
chr5_217969_C_T	chr5:217969	0.351	0.036	0.671	0.0013%
chr5_218459_C_T	chr5:218459	0.005	0.142	0.659	0.0033%
chr5_217940_C_T	chr5:217940	0.000	0.203	0.641	0.0013%
chr5_218276_C_G	chr5:218276	-0.358	0.018	0.106	0.0013%
chr5_188643_G_A	chr5:188643	0.354	0.069	0.212	<0.001%
chr5_218277_C_T	chr5:218277	-0.354	0.140	0.294	<0.001%
chr5_218234_G_C	chr5:218234	-0.351	-0.071	-0.471	<0.001%
chr5_188690_G_A	chr5:188690	-0.319	-0.095	-0.612	0.0053%
chr5_188693_G_C	chr5:188693	-0.334	-0.024	-0.494	<0.001%
chr5_218828_C_G	chr5:218828	-0.243	-0.211	-0.576	<0.001%
chr5_218477_G_T	chr5:218477	0.078	0.142	0.541	<0.001%
chr5_218483_G_A	chr5:218483	0.008	0.114	0.541	38.6%
chr5_171173_T_C	chr5:171173	-0.086	-0.149	-0.538	0.0033%
chr5_218406_G_A	chr5:218406	-0.032	0.147	0.529	0.0046%
chr5_188710_G_A	chr5:188710	-0.271	-0.084	-0.506	0.0020%
chr5_217981_T_C	chr5:217981	-0.082	-0.046	-0.506	0.0013%
chr5_218338_G_C	chr5:218338	0.205	0.170	0.494	0.0013%
chr5_218144_G_T	chr5:218144	0.087	0.066	0.482	0.243%
chr5_217898_A_C	chr5:217898	0.108	0.124	0.476	<0.001%
chr5_218107_G_A	chr5:218107	0.190	0.089	0.471	0.0020%
chr5_218272_C_T	chr5:218272	-0.266	0.058	0.247	0.0013%
chr5_218443_C_T	chr5:218443	-0.018	0.127	0.471	<0.001%
chr5_218285_T_C	chr5:218285	-0.201	-0.236	-0.459	0.0013%
chr5_218833_C_T	chr5:218833	-0.155	-0.119	-0.459	0.097%
chr5_188821_G_C	chr5:188821	0.055	-0.009	0.447	<0.001%
chr5_217873_A_G	chr5:217873	0.146	0.178	0.447	74.2%
chr5_218370_G_A	chr5:218370	0.205	0.117	0.447	<0.001%
chr5_218367_C_T	chr5:218367	0.251	0.188	0.376	<0.001%
chr5_188824_G_A	chr5:188824	0.090	0.038	0.435	0.0013%
chr5_217682_C_T	chr5:217682	-0.158	-0.028	-0.435	<0.001%
chr5_218380_C_T	chr5:218380	-0.035	0.122	0.435	<0.001%
chr5_188738_C_G	chr5:188738	0.243	0.029	0.235	<0.001%
chr5_218377_T_C	chr5:218377	-0.043	-0.126	-0.424	0.0013%
chr5_218481_C_T	chr5:218481	-0.008	0.076	0.400	0.018%
chr5_218331_G_A	chr5:218331	0.223	0.096	0.318	<0.001%
chr5_218348_C_A	chr5:218348	-0.220	-0.015	-0.141	<0.001%
chr5_218486_C_T	chr5:218486	0.067	0.074	0.388	<0.001%
chr5_218492_G_A	chr5:218492	0.012	0.099	0.388	<0.001%
chr5_218156_G_A	chr5:218156	-0.206	-0.218	0.376	<0.001%
chr5_218409_G_T	chr5:218409	0.060	0.102	0.376	<0.001%
chr5_218336_G_A	chr5:218336	0.073	0.122	0.365	<0.001%
chr5_218896_G_T	chr5:218896	0.065	0.135	0.365	<0.001%
chr5_217968_C_G	chr5:217968	0.027	0.145	0.353	0.0039%
chr5_218223_A_C	chr5:218223	-0.050	-0.063	-0.353	<0.001%
chr5_218291_C_T	chr5:218291	0.200	0.023	0.106	0.0013%
chr5_218309_G_A	chr5:218309	-0.141	0.037	0.353	0.0026%
chr5_218903_G_A	chr5:218903	0.023	0.109	0.353	<0.001%
chr5_218911_G_A	chr5:218911	-0.193	-0.063	0.000	0.0013%
chr5_188645_G_A	chr5:188645	0.188	0.044	0.000	0.0013%
chr5_188670_G_A	chr5:188670	-0.186	-0.044	-0.329	<0.001%
chr5_188821_G_A	chr5:188821	0.068	0.046	0.329	0.0013%
chr5_188852_T_G	chr5:188852	0.027	0.023	0.329	0.0020%
chr5_218194_T_G	chr5:218194	-0.048	-0.058	-0.329	<0.001%
chr5_218373_C_T	chr5:218373	-0.186	0.010	0.106	0.0020%
chr5_218061_C_T	chr5:218061	0.185	0.053	0.071	<0.001%
chr5_250490_G_A	chr5:250490	-0.047	-0.036	-0.321	0.0059%
chr5_188714_C_G	chr5:188714	-0.160	-0.088	-0.318	0.0013%
chr5_188812_A_G	chr5:188812	0.083	-0.010	0.318	0.0013%
chr5_188820_C_T	chr5:188820	-0.171	-0.016	-0.318	0.0026%
chr5_218372_G_A	chr5:218372	0.092	0.150	0.318	0.543%
chr5_171379_G_A	chr5:171379	0.179	0.194	0.235	0.0039%
chr5_250481_G_A	chr5:250481	0.100	0.036	0.309	0.0020%
chr5_217968_C_A	chr5:217968	0.007	0.135	0.306	0.223%
chr5_218342_C_T	chr5:218342	0.015	0.099	0.306	0.0033%
chr5_218371_G_A	chr5:218371	0.042	0.048	0.306	0.0020%
chr5_218759_A_T	chr5:218759	-0.173	-0.175	-0.282	0.0020%
chr5_171398_G_A	chr5:171398	-0.141	-0.152	-0.300	0.0020%
chr5_219238_G_C	chr5:219238	0.078	0.056	0.300	0.025%
chr5_188642_A_G	chr5:188642	-0.168	-0.023	-0.235	<0.001%
chr5_188820_C_A	chr5:188820	-0.111	-0.005	-0.294	0.0013%
chr5_198522_A_C	chr5:198522	0.115	0.053	0.294	<0.001%
chr5_217948_C_T	chr5:217948	0.136	0.112	0.294	0.049%
chr5_218260_G_C	chr5:218260	-0.045	0.074	0.294	0.0021%
chr5_218505_G_A	chr5:218505	0.022	0.061	0.294	0.037%
chr5_218644_G_A	chr5:218644	0.166	0.325	0.153	<0.001%
chr5_218844_C_G	chr5:218844	-0.052	-0.081	-0.294	<0.001%
chr5_218853_G_C	chr5:218853	0.165	0.010	0.153	0.0020%
chr5_217961_G_A	chr5:217961	-0.130	-0.061	-0.288	<0.001%
chr5_218279_G_A	chr5:218279	0.163	0.053	0.247	0.0079%
chr5_218355_C_G	chr5:218355	-0.163	-0.086	-0.176	0.0033%
chr5_219213_T_G	chr5:219213	-0.163	-0.129	0.118	24.1%
chr5_188598_C_T	chr5:188598	-0.162	-0.052	-0.235	0.0033%
chr5_218266_T_C	chr5:218266	-0.161	-0.071	-0.259	0.0013%
chr5_171167_C_T	chr5:171167	0.076	0.105	0.282	0.0066%
chr5_188700_C_T	chr5:188700	-0.128	-0.048	-0.282	<0.001%
chr5_218270_C_T	chr5:218270	-0.155	0.074	0.282	0.0020%
chr5_218831_G_A	chr5:218831	-0.115	-0.058	-0.282	0.0020%
chr5_218907_G_A	chr5:218907	0.078	0.061	0.282	34.3%
chr5_171094_G_C	chr5:171094	0.110	0.096	0.276	0.0013%
chr5_171386_G_C	chr5:171386	-0.123	-0.096	-0.276	<0.001%
chr5_171116_G_T	chr5:171116	-0.156	-0.164	-0.182	<0.001%
chr5_188633_G_A	chr5:188633	-0.155	-0.028	-0.212	0.0033%
chr5_188913_G_C	chr5:188913	0.067	0.029	0.271	0.012%
chr5_188921_C_A	chr5:188921	-0.097	0.014	-0.271	0.0020%
chr5_198425_C_T	chr5:198425	0.108	0.063	0.271	0.0033%
chr5_218220_C_T	chr5:218220	0.111	0.058	0.271	<0.001%
chr5_218340_G_T	chr5:218340	0.097	0.112	0.271	0.0013%
chr5_218734_C_T	chr5:218734	0.153	0.114	0.118	0.0026%
chr5_218912_C_T	chr5:218912	0.045	0.023	0.271	0.0020%
chr5_218328_G_C	chr5:218328	0.151	0.094	0.259	<0.001%
chr5_218905_G_C	chr5:218905	0.151	0.084	0.200	<0.001%
chr5_171156_C_T	chr5:171156	0.083	0.103	0.265	<0.001%
chr5_217959_G_A	chr5:217959	-0.095	0.000	-0.265	0.0013%
chr5_188796_C_G	chr5:188796	-0.146	-0.011	-0.118	<0.001%
chr5_188947_C_T	chr5:188947	-0.048	0.025	-0.259	<0.001%
chr5_218338_G_T	chr5:218338	0.022	0.063	0.259	0.0013%
chr5_218501_C_T	chr5:218501	-0.003	0.066	0.259	0.0013%
chr5_218921_G_A	chr5:218921	0.065	0.063	0.259	0.0013%
chr5_188640_T_C	chr5:188640	0.143	0.016	0.012	0.0033%
chr5_188760_G_T	chr5:188760	0.143	0.027	0.141	0.019%
chr5_217688_G_T	chr5:217688	-0.115	-0.046	-0.253	0.0020%
chr5_217927_G_A	chr5:217927	-0.136	-0.025	-0.253	<0.001%
chr5_219181_G_T	chr5:219181	0.135	0.226	0.253	<0.001%
chr5_218183_C_T	chr5:218183	0.141	0.094	0.188	<0.001%
chr5_188838_C_A	chr5:188838	0.097	0.006	0.247	<0.001%
chr5_218333_A_G	chr5:218333	-0.140	-0.122	-0.153	<0.001%
chr5_218355_C_T	chr5:218355	-0.140	0.003	0.118	0.0033%
chr5_197996_C_T	chr5:197996	0.031	0.061	0.243	0.0020%
chr5_188744_G_A	chr5:188744	-0.136	-0.036	-0.106	<0.001%
chr5_218857_G_T	chr5:218857	-0.136	-0.122	-0.176	<0.001%
chr5_217924_G_A	chr5:217924	0.135	0.165	0.076	0.0013%
chr5_188698_C_T	chr5:188698	-0.058	-0.038	-0.235	0.0053%
chr5_188704_G_A	chr5:188704	-0.126	-0.015	-0.235	<0.001%
chr5_188835_G_A	chr5:188835	-0.043	0.023	-0.235	0.0013%
chr5_188871_C_G	chr5:188871	0.133	0.003	0.176	<0.001%
chr5_217941_C_T	chr5:217941	-0.025	0.069	0.235	0.0020%
chr5_218252_G_A	chr5:218252	0.055	0.099	0.235	0.011%
chr5_218373_C_A	chr5:218373	-0.095	0.036	0.235	0.0013%
chr5_218378_C_G	chr5:218378	-0.133	-0.020	-0.047	<0.001%
chr5_171412_C_T	chr5:171412	-0.132	-0.146	-0.224	<0.001%
chr5_188948_G_A	chr5:188948	-0.131	0.039	-0.200	0.0033%
chr5_171150_G_T	chr5:171150	0.101	0.094	0.229	<0.001%
chr5_188735_T_G	chr5:188735	-0.130	-0.013	0.024	0.240%
chr5_218884_G_A	chr5:218884	-0.130	0.041	-0.059	<0.001%
chr5_263388_G_A	chr5:263388	-0.027	-0.023	-0.229	0.026%
chr5_218374_C_T	chr5:218374	-0.128	0.010	0.071	<0.001%
chr5_250526_C_T	chr5:250526	-0.031	-0.025	-0.226	0.0085%
chr5_188777_C_T	chr5:188777	-0.126	-0.038	-0.129	0.0072%
chr5_188944_C_G	chr5:188944	-0.078	0.019	-0.224	<0.001%
chr5_217651_T_C	chr5:217651	0.057	0.000	0.224	<0.001%
chr5_217678_C_A	chr5:217678	-0.057	-0.015	-0.224	<0.001%
chr5_217878_C_A	chr5:217878	-0.088	-0.107	-0.224	0.0020%
chr5_218128_A_T	chr5:218128	0.126	0.132	0.094	<0.001%
chr5_218280_C_T	chr5:218280	-0.055	0.114	0.224	<0.001%
chr5_218341_G_A	chr5:218341	0.068	0.066	0.224	<0.001%
chr5_218518_C_T	chr5:218518	0.017	0.043	0.224	0.0053%
chr5_218813_G_A	chr5:218813	0.090	0.152	0.224	<0.001%
chr5_218915_G_C	chr5:218915	0.105	0.155	0.224	0.0033%
chr5_263398_T_C	chr5:263398	0.004	0.043	0.224	22.3%
chr5_188948_G_C	chr5:188948	-0.123	0.020	-0.200	<0.001%
chr5_218241_T_C	chr5:218241	-0.123	-0.005	-0.200	24.0%
chr5_188608_C_G	chr5:188608	-0.037	-0.006	0.212	0.030%
chr5_218191_G_A	chr5:218191	-0.082	0.129	0.212	<0.001%
chr5_218354_A_T	chr5:218354	-0.120	-0.020	-0.012	0.014%
chr5_218826_G_T	chr5:218826	-0.095	-0.051	-0.212	<0.001%
chr5_218858_T_A	chr5:218858	0.083	0.124	0.212	<0.001%
chr5_250579_G_T	chr5:250579	0.054	0.046	0.209	<0.001%
chr5_171149_C_A	chr5:171149	-0.117	-0.124	-0.029	<0.001%
chr5_218529_C_T	chr5:218529	0.116	0.033	0.153	<0.001%
chr5_218351_C_T	chr5:218351	-0.115	0.003	0.024	0.0013%
chr5_218122_T_C	chr5:218122	0.073	0.056	0.200	0.0013%
chr5_218290_C_G	chr5:218290	-0.037	-0.098	-0.200	0.0013%
chr5_218650_C_G	chr5:218650	-0.088	-0.236	-0.200	0.0013%
chr5_218840_C_G	chr5:218840	-0.083	-0.043	-0.200	0.0013%
chr5_219292_T_C	chr5:219292	0.113	0.051	0.065	0.269%
chr5_219206_G_C	chr5:219206	0.111	0.020	0.047	<0.001%
chr5_188734_C_T	chr5:188734	0.110	0.080	0.059	0.0020%
chr5_217793_A_C	chr5:217793	0.062	0.008	0.194	0.026%
chr5_218735_C_G	chr5:218735	0.110	0.056	0.047	0.0013%
chr5_218819_C_T	chr5:218819	-0.110	-0.109	-0.141	0.0013%
chr5_218292_C_T	chr5:218292	0.108	0.052	0.176	0.0013%
chr5_171378_C_T	chr5:171378	-0.088	-0.079	-0.188	0.051%
chr5_188622_C_T	chr5:188622	-0.075	-0.023	-0.188	<0.001%
chr5_188833_C_G	chr5:188833	0.067	-0.047	0.188	<0.001%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.