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INTS1

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near INTS1

chr7:1,370,276..1,604,389, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr7_1412660_C_G	chr7:1412660	-0.165	-0.061	-0.365	<0.001%
chr7_1412661_A_G	chr7:1412661	-0.143	-0.067	-0.365	0.0020%
chr7_1412813_C_G	chr7:1412813	-0.068	-0.004	-0.341	0.0046%
chr7_1407722_C_T	chr7:1407722	0.051	-0.032	-0.318	<0.001%
chr7_1412658_G_A	chr7:1412658	-0.136	-0.038	-0.318	<0.001%
chr7_1412648_T_G	chr7:1412648	-0.101	-0.052	-0.294	<0.001%
chr7_1412824_T_G	chr7:1412824	-0.128	-0.023	-0.259	<0.001%
chr7_1407723_A_T	chr7:1407723	0.042	-0.028	-0.247	0.0072%
chr7_1412814_A_G	chr7:1412814	0.135	0.053	-0.094	0.0039%
chr7_1407741_C_T	chr7:1407741	-0.024	0.038	0.235	<0.001%
chr7_1407790_G_A	chr7:1407790	0.007	-0.024	-0.235	0.024%
chr7_1412681_C_T	chr7:1412681	0.131	0.041	0.071	0.0020%
chr7_1412641_G_T	chr7:1412641	0.097	0.048	0.188	<0.001%
chr7_1412642_G_A	chr7:1412642	-0.088	-0.025	-0.188	<0.001%
chr7_1412757_G_A	chr7:1412757	0.078	0.020	0.165	<0.001%
chr7_1412686_G_A	chr7:1412686	0.090	0.041	0.059	0.0020%
chr7_1412834_C_T	chr7:1412834	0.030	0.039	0.153	0.0020%
chr7_1412843_C_T	chr7:1412843	-0.087	-0.003	-0.129	0.043%
chr7_1412851_C_G	chr7:1412851	-0.070	-0.016	-0.153	<0.001%
chr7_1412859_C_G	chr7:1412859	-0.085	-0.005	-0.094	0.0033%
chr7_1407683_C_A	chr7:1407683	0.004	-0.019	-0.147	<0.001%
chr7_1407725_A_G	chr7:1407725	0.024	-0.004	-0.147	<0.001%
chr7_1407728_G_A	chr7:1407728	-0.017	0.014	0.141	<0.001%
chr7_1407780_G_A	chr7:1407780	0.006	-0.003	-0.141	0.0026%
chr7_1412655_T_C	chr7:1412655	0.032	0.005	0.141	0.014%
chr7_1412684_G_A	chr7:1412684	0.050	0.028	0.141	0.0013%
chr7_1407671_G_A	chr7:1407671	-0.017	0.006	0.135	0.857%
chr7_1407679_C_G	chr7:1407679	-0.011	0.008	0.135	<0.001%
chr7_1407820_G_A	chr7:1407820	0.005	-0.011	-0.135	<0.001%
chr7_1412775_G_A	chr7:1412775	0.075	0.018	0.106	<0.001%
chr7_1393499_A_C	chr7:1393499	0.065	-0.005	0.129	—
chr7_1407647_G_A	chr7:1407647	0.009	-0.004	-0.129	0.0013%
chr7_1412826_G_C	chr7:1412826	-0.005	0.030	0.129	<0.001%
chr7_1407825_C_G	chr7:1407825	0.025	0.018	0.124	<0.001%
chr7_1412640_C_T	chr7:1412640	-0.020	0.003	-0.118	<0.001%
chr7_1412749_T_C	chr7:1412749	0.055	0.015	0.118	0.345%
chr7_1412754_T_C	chr7:1412754	0.048	0.000	0.118	<0.001%
chr7_1412785_G_A	chr7:1412785	0.067	0.033	0.047	<0.001%
chr7_1407632_C_T	chr7:1407632	0.010	-0.011	-0.112	0.0013%
chr7_1407652_C_A	chr7:1407652	0.003	0.042	0.112	<0.001%
chr7_1407685_G_T	chr7:1407685	0.009	-0.010	-0.112	0.0039%
chr7_1393439_G_C	chr7:1393439	-0.006	-0.005	0.106	—
chr7_1407795_T_G	chr7:1407795	-0.007	-0.022	-0.106	0.0026%
chr7_1407818_C_T	chr7:1407818	0.007	-0.008	-0.100	0.014%
chr7_1407842_G_C	chr7:1407842	0.008	-0.019	-0.100	<0.001%
chr7_1412671_A_G	chr7:1412671	-0.057	-0.025	-0.071	<0.001%
chr7_1412852_G_A	chr7:1412852	-0.055	0.014	0.000	0.0026%
chr7_1412820_G_A	chr7:1412820	0.012	0.028	-0.094	<0.001%
chr7_1412846_G_C	chr7:1412846	0.032	0.005	0.094	0.0013%
chr7_1412683_C_T	chr7:1412683	0.052	0.025	0.082	0.0013%
chr7_1407667_C_T	chr7:1407667	0.020	-0.008	-0.088	<0.001%
chr7_1407750_G_A	chr7:1407750	0.015	-0.001	-0.088	0.0013%
chr7_1407807_C_T	chr7:1407807	-0.001	-0.008	-0.088	<0.001%
chr7_1393515_A_G	chr7:1393515	0.001	-0.016	-0.082	—
chr7_1407648_C_T	chr7:1407648	0.004	0.000	-0.082	0.0026%
chr7_1407656_C_T	chr7:1407656	-0.005	0.027	0.082	0.019%
chr7_1407683_C_G	chr7:1407683	0.004	-0.010	-0.082	<0.001%
chr7_1412170_A_C	chr7:1412170	-0.008	-0.001	0.082	—
chr7_1412640_C_A	chr7:1412640	0.000	0.010	-0.082	<0.001%
chr7_1412664_T_C	chr7:1412664	0.007	-0.011	0.082	<0.001%
chr7_1412798_C_A	chr7:1412798	-0.012	0.015	0.082	<0.001%
chr7_1412728_G_C	chr7:1412728	-0.045	-0.009	-0.047	<0.001%
chr7_1393438_G_C	chr7:1393438	0.002	0.001	0.076	—
chr7_1407642_G_T	chr7:1407642	-0.002	0.000	-0.076	<0.001%
chr7_1407792_C_A	chr7:1407792	0.002	0.003	-0.076	<0.001%
chr7_1412121_T_G	chr7:1412121	0.005	0.000	0.076	—
chr7_1412171_A_C	chr7:1412171	0.000	0.001	0.076	—
chr7_1412838_T_C	chr7:1412838	0.043	-0.027	0.012	<0.001%
chr7_1393399_A_G	chr7:1393399	0.003	-0.009	-0.071	—
chr7_1393439_G_T	chr7:1393439	-0.011	0.001	0.071	—
chr7_1393461_G_C	chr7:1393461	-0.002	-0.001	0.071	—
chr7_1393494_T_G	chr7:1393494	-0.002	-0.003	0.071	—
chr7_1393526_A_C	chr7:1393526	-0.001	-0.003	0.071	—
chr7_1407707_C_G	chr7:1407707	-0.005	0.004	0.071	0.0013%
chr7_1407743_G_C	chr7:1407743	0.015	0.005	-0.071	0.020%
chr7_1407745_C_T	chr7:1407745	0.010	0.006	-0.071	0.0039%
chr7_1407764_G_A	chr7:1407764	-0.002	0.004	-0.071	0.0092%
chr7_1412164_T_C	chr7:1412164	0.007	0.004	0.071	—
chr7_1412194_A_T	chr7:1412194	-0.023	-0.010	-0.071	—
chr7_1412218_G_A	chr7:1412218	0.005	-0.001	-0.071	—
chr7_1412219_G_T	chr7:1412219	0.007	-0.004	-0.071	—
chr7_1412243_T_G	chr7:1412243	0.003	-0.001	0.071	—
chr7_1412247_A_C	chr7:1412247	-0.005	-0.001	0.071	—
chr7_1412257_A_G	chr7:1412257	0.010	0.005	0.071	—
chr7_1412697_T_C	chr7:1412697	0.033	0.016	0.071	<0.001%
chr7_1412785_G_C	chr7:1412785	0.033	0.018	-0.071	<0.001%
chr7_1412832_C_T	chr7:1412832	0.035	0.020	0.071	0.0013%
chr7_1393395_A_G	chr7:1393395	-0.007	-0.013	-0.065	—
chr7_1393439_G_A	chr7:1393439	-0.001	0.008	0.065	—
chr7_1393440_G_T	chr7:1393440	-0.001	0.006	0.065	—
chr7_1393482_G_C	chr7:1393482	0.002	-0.003	0.065	—
chr7_1407633_G_A	chr7:1407633	-0.015	0.027	0.065	0.0020%
chr7_1412244_C_G	chr7:1412244	0.003	0.016	0.065	—
chr7_1412248_A_C	chr7:1412248	0.000	-0.006	0.065	—
chr7_1412737_A_G	chr7:1412737	0.037	-0.006	-0.012	0.0066%
chr7_1412826_G_A	chr7:1412826	-0.037	0.011	0.035	<0.001%
chr7_1393397_G_T	chr7:1393397	0.002	-0.001	0.059	—
chr7_1393398_G_C	chr7:1393398	0.012	0.005	0.059	—
chr7_1393426_T_A	chr7:1393426	0.010	-0.008	0.059	—
chr7_1393429_A_C	chr7:1393429	0.002	-0.004	0.059	—
chr7_1393431_A_C	chr7:1393431	0.002	-0.003	0.059	—
chr7_1393438_G_T	chr7:1393438	-0.002	0.005	0.059	—
chr7_1393440_G_A	chr7:1393440	0.002	0.001	0.059	—
chr7_1393460_G_T	chr7:1393460	0.003	0.011	0.059	—
chr7_1393483_A_G	chr7:1393483	0.002	-0.006	-0.059	—
chr7_1393493_T_C	chr7:1393493	-0.001	-0.006	0.059	—
chr7_1393510_A_C	chr7:1393510	0.002	-0.005	0.059	—
chr7_1407675_G_A	chr7:1407675	-0.013	0.018	0.059	<0.001%
chr7_1407678_C_T	chr7:1407678	0.011	0.001	0.059	0.0013%
chr7_1407710_T_G	chr7:1407710	0.013	-0.009	-0.059	<0.001%
chr7_1407817_G_A	chr7:1407817	0.013	-0.003	-0.059	<0.001%
chr7_1407819_C_T	chr7:1407819	0.014	0.019	0.059	1.02%
chr7_1412107_C_T	chr7:1412107	0.000	-0.003	-0.059	—
chr7_1412149_T_C	chr7:1412149	-0.025	-0.025	-0.059	—
chr7_1412168_T_G	chr7:1412168	-0.001	-0.004	0.059	—
chr7_1412200_G_T	chr7:1412200	-0.005	0.004	-0.059	—
chr7_1412215_T_G	chr7:1412215	-0.003	0.004	0.059	<0.001%
chr7_1412218_G_T	chr7:1412218	0.012	0.004	-0.059	—
chr7_1412220_T_A	chr7:1412220	-0.002	-0.006	-0.059	—
chr7_1412240_G_T	chr7:1412240	-0.002	0.006	-0.059	0.0026%
chr7_1412649_G_A	chr7:1412649	-0.007	0.005	-0.059	0.0033%
chr7_1412668_G_A	chr7:1412668	-0.027	-0.006	-0.059	0.087%
chr7_1412673_G_T	chr7:1412673	-0.002	-0.004	-0.059	0.0026%
chr7_1412678_A_C	chr7:1412678	0.002	-0.003	0.059	<0.001%
chr7_1412759_C_A	chr7:1412759	-0.027	0.005	-0.059	<0.001%
chr7_1412789_C_T	chr7:1412789	-0.033	0.025	-0.059	0.014%
chr7_1412732_G_C	chr7:1412732	-0.032	-0.001	-0.035	0.011%
chr7_1412759_C_T	chr7:1412759	-0.032	-0.010	-0.024	<0.001%
chr7_1393401_G_T	chr7:1393401	0.006	0.001	0.053	—
chr7_1393410_G_A	chr7:1393410	0.007	0.001	-0.053	—
chr7_1393410_G_C	chr7:1393410	-0.002	-0.006	-0.053	—
chr7_1393410_G_T	chr7:1393410	-0.006	-0.004	-0.053	—
chr7_1393428_A_C	chr7:1393428	0.007	0.003	0.053	—
chr7_1393433_A_C	chr7:1393433	0.003	0.003	0.053	—
chr7_1393481_G_C	chr7:1393481	0.004	-0.009	0.053	—
chr7_1393490_C_A	chr7:1393490	-0.002	0.003	-0.053	—
chr7_1393506_T_G	chr7:1393506	-0.002	-0.006	-0.053	—
chr7_1393527_T_C	chr7:1393527	-0.001	-0.001	0.053	—
chr7_1407670_C_T	chr7:1407670	0.011	0.009	-0.053	0.0013%
chr7_1412108_A_C	chr7:1412108	-0.003	-0.008	0.053	<0.001%
chr7_1412115_G_T	chr7:1412115	0.005	0.004	0.053	—
chr7_1412139_C_A	chr7:1412139	-0.007	0.001	-0.053	—
chr7_1412170_A_G	chr7:1412170	-0.008	0.000	0.053	—
chr7_1412189_A_C	chr7:1412189	0.000	-0.014	0.053	—
chr7_1412210_C_T	chr7:1412210	0.000	0.006	-0.053	—
chr7_1412219_G_A	chr7:1412219	0.017	-0.003	-0.053	—
chr7_1412220_T_G	chr7:1412220	0.000	-0.013	-0.053	—
chr7_1412223_C_G	chr7:1412223	-0.005	-0.005	0.053	—
chr7_1412230_G_A	chr7:1412230	0.002	0.006	-0.053	—
chr7_1412233_C_T	chr7:1412233	0.007	0.003	-0.053	—
chr7_1412669_G_A	chr7:1412669	0.028	0.020	0.035	<0.001%
chr7_1393397_G_C	chr7:1393397	0.005	-0.001	0.047	—
chr7_1393402_A_C	chr7:1393402	0.017	-0.005	0.047	—
chr7_1393411_C_T	chr7:1393411	-0.007	0.004	-0.047	—
chr7_1393419_C_A	chr7:1393419	0.007	0.005	-0.047	—
chr7_1393438_G_A	chr7:1393438	-0.003	0.006	0.047	—
chr7_1393451_A_G	chr7:1393451	-0.002	-0.010	-0.047	—
chr7_1393451_A_T	chr7:1393451	0.006	-0.001	-0.047	—
chr7_1393460_G_C	chr7:1393460	0.000	0.000	0.047	—
chr7_1393486_T_C	chr7:1393486	0.001	-0.005	0.047	0.0013%
chr7_1393500_A_C	chr7:1393500	-0.003	0.003	0.047	—
chr7_1393512_T_G	chr7:1393512	-0.002	-0.018	-0.047	—
chr7_1393520_C_G	chr7:1393520	0.000	-0.003	-0.047	—
chr7_1393528_C_A	chr7:1393528	-0.003	0.000	-0.047	—
chr7_1393528_C_T	chr7:1393528	-0.007	0.001	-0.047	—
chr7_1393529_A_C	chr7:1393529	0.000	-0.006	0.047	—
chr7_1407644_G_A	chr7:1407644	-0.004	-0.004	-0.047	<0.001%
chr7_1407751_C_A	chr7:1407751	0.001	0.000	-0.047	0.0013%
chr7_1407781_C_T	chr7:1407781	-0.007	0.009	-0.047	0.0072%
chr7_1412107_C_A	chr7:1412107	-0.013	-0.001	-0.047	—
chr7_1412109_G_C	chr7:1412109	0.000	-0.001	0.047	—
chr7_1412119_C_T	chr7:1412119	-0.008	-0.001	-0.047	—
chr7_1412122_C_T	chr7:1412122	-0.005	0.003	-0.047	—
chr7_1412127_C_T	chr7:1412127	-0.010	-0.003	-0.047	—
chr7_1412130_T_G	chr7:1412130	-0.008	-0.013	0.047	—
chr7_1412151_C_T	chr7:1412151	0.000	0.000	-0.047	—
chr7_1412168_T_C	chr7:1412168	-0.004	0.000	0.047	—
chr7_1412169_T_C	chr7:1412169	0.002	-0.001	0.047	—
chr7_1412177_G_C	chr7:1412177	0.008	0.005	0.047	—
chr7_1412180_G_C	chr7:1412180	0.008	-0.001	0.047	—
chr7_1412180_G_T	chr7:1412180	0.007	0.008	0.047	—
chr7_1412211_C_T	chr7:1412211	0.017	0.008	-0.047	—
chr7_1412217_A_T	chr7:1412217	0.013	0.001	-0.047	—
chr7_1412218_G_C	chr7:1412218	0.010	-0.003	-0.047	—
chr7_1412230_G_T	chr7:1412230	-0.007	0.000	-0.047	—
chr7_1412231_T_G	chr7:1412231	0.002	-0.005	0.047	—
chr7_1412242_T_C	chr7:1412242	0.008	0.001	0.047	—
chr7_1412252_C_G	chr7:1412252	0.002	-0.006	0.047	—
chr7_1412254_T_C	chr7:1412254	-0.008	-0.028	-0.047	—
chr7_1412256_G_A	chr7:1412256	-0.007	-0.006	-0.047	—
chr7_1412688_C_T	chr7:1412688	0.015	0.025	-0.047	<0.001%
chr7_1412739_G_A	chr7:1412739	0.022	0.000	-0.047	<0.001%
chr7_1412740_G_C	chr7:1412740	0.010	0.008	0.047	0.0013%
chr7_1412740_G_T	chr7:1412740	0.000	-0.008	-0.047	<0.001%
chr7_1412767_G_C	chr7:1412767	0.023	0.008	0.047	0.0013%
chr7_1412810_G_T	chr7:1412810	0.008	0.009	0.047	<0.001%
chr7_1412214_C_A	chr7:1412214	0.026	0.005	-0.006	—
chr7_1393394_G_C	chr7:1393394	0.012	0.005	0.041	<0.001%
chr7_1393403_A_G	chr7:1393403	0.002	-0.003	0.041	—
chr7_1393406_C_T	chr7:1393406	0.000	-0.001	-0.041	—

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.