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KLHL17

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near KLHL17

chr1:860,583..1,065,719, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr1_904299_G_A	chr1:904299	0.190	0.301	1.000	0.0013%
chr1_912972_G_A	chr1:912972	0.766	0.633	1.000	<0.001%
chr1_904301_G_C	chr1:904301	0.204	0.260	1.000	<0.001%
chr1_904707_A_C	chr1:904707	-1.000	-0.144	-1.000	0.0028%
chr1_904307_G_A	chr1:904307	0.256	0.256	1.000	0.0028%
chr1_869922_C_T	chr1:869922	-0.950	-0.329	-1.000	0.0020%
chr1_904306_G_T	chr1:904306	0.199	0.233	1.000	<0.001%
chr1_912970_C_T	chr1:912970	0.627	0.561	1.000	0.0013%
chr1_913018_G_C	chr1:913018	0.438	0.409	1.000	0.0013%
chr1_921194_C_G	chr1:921194	0.798	0.372	1.000	—
chr1_904778_G_C	chr1:904778	-0.788	-0.054	-1.000	<0.001%
chr1_904694_G_A	chr1:904694	0.730	0.212	0.647	0.0021%
chr1_921199_C_T	chr1:921199	-0.526	-0.294	-1.000	—
chr1_906992_A_G	chr1:906992	0.104	0.249	1.000	0.0013%
chr1_921196_T_G	chr1:921196	0.696	0.430	0.935	—
chr1_921198_C_T	chr1:921198	-0.473	-0.296	-1.000	0.0033%
chr1_921199_C_G	chr1:921199	-0.519	-0.315	-1.000	—
chr1_904732_G_A	chr1:904732	0.654	0.135	0.653	0.0013%
chr1_921198_C_A	chr1:921198	-0.456	-0.272	-1.000	—
chr1_921194_C_A	chr1:921194	0.631	0.301	0.841	—
chr1_913005_T_C	chr1:913005	0.399	0.239	1.000	0.0013%
chr1_921197_C_A	chr1:921197	-0.358	-0.245	-1.000	<0.001%
chr1_921200_T_A	chr1:921200	-0.462	-0.303	-1.000	—
chr1_921197_C_T	chr1:921197	-0.340	-0.216	-1.000	—
chr1_921198_C_G	chr1:921198	-0.433	-0.266	-1.000	—
chr1_870017_C_T	chr1:870017	0.588	0.258	0.782	<0.001%
chr1_921193_T_C	chr1:921193	-0.399	-0.216	-1.000	—
chr1_921199_C_A	chr1:921199	-0.382	-0.242	-0.965	—
chr1_904780_G_A	chr1:904780	-0.542	-0.036	-0.588	0.0026%
chr1_906914_C_T	chr1:906914	-0.223	-0.114	-0.953	0.0013%
chr1_904309_G_C	chr1:904309	0.105	0.110	0.912	<0.001%
chr1_869776_C_G	chr1:869776	0.275	0.128	0.809	<0.001%
chr1_870113_G_A	chr1:870113	0.338	0.501	0.785	<0.001%
chr1_870019_C_A	chr1:870019	0.440	0.237	0.688	<0.001%
chr1_921196_T_C	chr1:921196	-0.282	-0.195	-0.776	—
chr1_869777_C_A	chr1:869777	0.191	0.107	0.753	<0.001%
chr1_921197_C_G	chr1:921197	-0.254	-0.181	-0.747	—
chr1_913039_G_T	chr1:913039	-0.119	-0.170	-0.718	<0.001%
chr1_870069_C_A	chr1:870069	0.239	0.212	0.712	<0.001%
chr1_904721_C_T	chr1:904721	0.316	0.078	0.706	<0.001%
chr1_906982_C_T	chr1:906982	-0.121	-0.034	-0.706	22.9%
chr1_913034_G_A	chr1:913034	-0.116	-0.159	-0.700	<0.001%
chr1_904836_C_T	chr1:904836	0.394	0.066	0.418	0.0013%
chr1_904808_C_T	chr1:904808	0.393	0.037	0.382	0.0013%
chr1_904845_C_A	chr1:904845	0.393	0.048	0.003	<0.001%
chr1_870020_C_G	chr1:870020	0.388	0.179	0.447	0.0026%
chr1_904450_C_A	chr1:904450	0.131	0.076	0.653	<0.001%
chr1_869895_C_A	chr1:869895	-0.354	0.145	-0.441	<0.001%
chr1_869774_C_A	chr1:869774	0.223	0.103	0.618	<0.001%
chr1_904787_C_A	chr1:904787	0.345	0.043	0.485	0.0013%
chr1_904429_C_T	chr1:904429	0.148	0.061	0.606	<0.001%
chr1_869777_C_T	chr1:869777	0.166	0.112	0.600	<0.001%
chr1_906997_T_G	chr1:906997	0.098	0.165	0.600	0.0013%
chr1_912976_A_G	chr1:912976	-0.144	-0.104	-0.588	<0.001%
chr1_921172_G_C	chr1:921172	-0.231	-0.124	-0.576	—
chr1_869958_C_G	chr1:869958	-0.324	-0.014	-0.294	0.0085%
chr1_911378_G_C	chr1:911378	-0.208	-0.053	-0.571	<0.001%
chr1_904695_T_C	chr1:904695	-0.275	-0.061	-0.568	0.167%
chr1_904787_C_G	chr1:904787	0.317	0.010	0.297	<0.001%
chr1_904817_A_T	chr1:904817	-0.314	0.015	-0.147	<0.001%
chr1_912977_C_T	chr1:912977	-0.148	-0.086	-0.541	0.0013%
chr1_921149_G_A	chr1:921149	0.197	0.043	0.541	<0.001%
chr1_904514_G_A	chr1:904514	0.305	0.109	0.159	<0.001%
chr1_904724_C_T	chr1:904724	0.280	0.084	0.529	<0.001%
chr1_906924_A_T	chr1:906924	-0.081	-0.098	-0.529	<0.001%
chr1_869757_C_G	chr1:869757	0.141	0.104	0.518	<0.001%
chr1_904744_G_C	chr1:904744	-0.285	-0.035	-0.324	<0.001%
chr1_906797_T_C	chr1:906797	0.035	0.049	0.500	<0.001%
chr1_921196_T_A	chr1:921196	-0.204	-0.124	-0.500	0.0020%
chr1_919793_G_T	chr1:919793	-0.148	-0.107	-0.494	<0.001%
chr1_921195_C_A	chr1:921195	0.098	-0.004	0.482	—
chr1_869793_C_G	chr1:869793	0.135	0.085	0.476	0.0066%
chr1_870150_A_G	chr1:870150	-0.158	-0.085	-0.476	0.033%
chr1_921195_C_T	chr1:921195	-0.208	-0.122	-0.471	—
chr1_869933_G_A	chr1:869933	-0.265	-0.052	-0.047	<0.001%
chr1_904451_C_G	chr1:904451	0.091	0.050	0.459	0.0020%
chr1_904837_G_C	chr1:904837	0.174	0.057	0.459	0.0026%
chr1_904784_C_T	chr1:904784	-0.258	-0.001	-0.059	<0.001%
chr1_869967_T_C	chr1:869967	0.150	0.171	0.453	<0.001%
chr1_869983_C_A	chr1:869983	0.162	-0.038	0.453	<0.001%
chr1_870051_G_A	chr1:870051	0.146	0.109	0.453	0.0020%
chr1_869855_A_G	chr1:869855	0.255	0.052	0.359	<0.001%
chr1_904743_C_T	chr1:904743	-0.255	-0.049	-0.324	<0.001%
chr1_904700_G_T	chr1:904700	-0.252	-0.013	-0.047	0.150%
chr1_904861_G_C	chr1:904861	0.249	-0.001	0.135	<0.001%
chr1_911333_T_C	chr1:911333	-0.097	-0.003	-0.429	<0.001%
chr1_919799_G_A	chr1:919799	-0.141	-0.108	-0.429	0.0013%
chr1_904810_C_A	chr1:904810	0.240	0.026	0.176	<0.001%
chr1_912945_T_A	chr1:912945	0.089	0.089	0.418	0.0046%
chr1_870057_G_T	chr1:870057	0.027	0.052	0.412	<0.001%
chr1_906954_C_T	chr1:906954	-0.062	-0.077	-0.412	0.0013%
chr1_906969_C_G	chr1:906969	0.041	0.094	0.412	<0.001%
chr1_912877_G_A	chr1:912877	0.052	-0.015	-0.412	0.0020%
chr1_912971_C_T	chr1:912971	-0.104	-0.067	-0.406	0.0013%
chr1_904636_C_T	chr1:904636	0.087	0.011	0.400	0.0022%
chr1_904830_C_T	chr1:904830	-0.223	-0.005	0.200	0.025%
chr1_904737_C_G	chr1:904737	-0.222	-0.020	-0.106	0.0026%
chr1_904703_T_C	chr1:904703	-0.173	-0.030	-0.391	<0.001%
chr1_904801_G_A	chr1:904801	0.123	0.056	0.391	<0.001%
chr1_870013_A_G	chr1:870013	-0.219	-0.135	-0.388	0.041%
chr1_904725_T_C	chr1:904725	-0.126	-0.035	-0.388	<0.001%
chr1_906891_T_A	chr1:906891	-0.071	-0.066	-0.388	0.0013%
chr1_904847_T_C	chr1:904847	0.192	-0.015	-0.376	<0.001%
chr1_904458_C_T	chr1:904458	0.015	0.048	0.371	<0.001%
chr1_904517_G_A	chr1:904517	0.032	0.034	0.371	0.0066%
chr1_904837_G_A	chr1:904837	0.206	0.031	0.371	0.0026%
chr1_921124_C_G	chr1:921124	0.210	0.132	0.235	<0.001%
chr1_870058_G_A	chr1:870058	0.011	0.061	0.365	0.0013%
chr1_870067_C_T	chr1:870067	0.053	0.069	0.359	0.028%
chr1_904425_C_T	chr1:904425	0.048	0.050	0.359	0.0020%
chr1_870002_C_G	chr1:870002	-0.201	0.028	-0.312	<0.001%
chr1_861161_A_T	chr1:861161	0.121	0.180	0.353	<0.001%
chr1_904728_G_T	chr1:904728	0.161	0.050	0.353	0.0033%
chr1_904787_C_T	chr1:904787	0.177	0.032	0.347	0.0013%
chr1_904804_G_C	chr1:904804	-0.196	0.020	-0.088	<0.001%
chr1_921190_A_C	chr1:921190	-0.195	-0.121	-0.282	—
chr1_911415_A_G	chr1:911415	0.194	0.015	0.147	0.013%
chr1_869793_C_T	chr1:869793	0.116	0.066	0.341	<0.001%
chr1_904717_C_T	chr1:904717	0.051	0.053	0.341	<0.001%
chr1_921188_T_A	chr1:921188	-0.141	-0.160	-0.341	—
chr1_870022_A_G	chr1:870022	0.029	-0.072	-0.335	<0.001%
chr1_921191_C_A	chr1:921191	0.190	0.058	0.288	—
chr1_904699_C_A	chr1:904699	-0.186	0.009	0.212	<0.001%
chr1_906870_A_G	chr1:906870	-0.089	-0.049	-0.329	1.69%
chr1_906996_G_A	chr1:906996	-0.071	-0.071	-0.329	<0.001%
chr1_921185_T_C	chr1:921185	0.186	0.091	0.053	—
chr1_904859_C_G	chr1:904859	-0.185	0.009	-0.115	0.0039%
chr1_921190_A_G	chr1:921190	-0.184	-0.154	-0.276	—
chr1_904422_C_T	chr1:904422	0.046	0.038	0.324	0.0013%
chr1_904452_C_A	chr1:904452	0.011	0.054	0.324	<0.001%
chr1_904505_C_G	chr1:904505	0.106	0.014	0.324	<0.001%
chr1_904474_C_T	chr1:904474	-0.181	-0.002	-0.218	0.0013%
chr1_869835_G_C	chr1:869835	-0.052	-0.024	-0.318	0.0020%
chr1_904121_C_G	chr1:904121	-0.040	-0.052	-0.318	<0.001%
chr1_904478_C_T	chr1:904478	0.044	0.016	0.318	0.0014%
chr1_906981_C_T	chr1:906981	-0.004	-0.027	-0.318	<0.001%
chr1_870119_G_A	chr1:870119	0.051	0.195	0.315	0.0020%
chr1_869905_G_T	chr1:869905	0.083	0.030	0.312	0.0013%
chr1_869951_A_G	chr1:869951	-0.176	-0.055	-0.247	0.012%
chr1_912873_C_G	chr1:912873	0.062	-0.033	-0.312	<0.001%
chr1_921194_C_T	chr1:921194	0.176	0.096	0.247	—
chr1_870042_C_A	chr1:870042	0.065	0.016	0.306	<0.001%
chr1_919771_C_G	chr1:919771	0.158	0.105	0.306	0.0013%
chr1_921184_T_A	chr1:921184	0.110	0.062	0.306	—
chr1_904516_G_T	chr1:904516	0.171	0.031	0.153	0.0010%
chr1_904785_C_G	chr1:904785	0.169	0.033	0.135	<0.001%
chr1_870089_G_C	chr1:870089	0.168	0.090	0.141	<0.001%
chr1_870110_G_A	chr1:870110	0.114	-0.001	0.297	0.0013%
chr1_904620_C_T	chr1:904620	0.157	0.016	0.294	0.0021%
chr1_906999_C_T	chr1:906999	-0.038	-0.038	-0.294	<0.001%
chr1_919792_A_T	chr1:919792	-0.091	-0.074	-0.294	0.0053%
chr1_921189_G_C	chr1:921189	-0.095	-0.102	-0.294	—
chr1_904511_A_T	chr1:904511	0.165	0.022	0.247	0.0010%
chr1_869931_G_A	chr1:869931	-0.165	-0.129	0.147	0.0020%
chr1_904715_C_T	chr1:904715	0.022	0.027	0.288	<0.001%
chr1_860995_T_G	chr1:860995	-0.029	-0.060	-0.285	0.0079%
chr1_870187_G_A	chr1:870187	0.061	0.065	0.285	0.0026%
chr1_904804_G_T	chr1:904804	0.047	0.034	0.285	0.020%
chr1_904435_C_T	chr1:904435	0.092	0.046	0.282	<0.001%
chr1_904764_C_T	chr1:904764	0.157	0.041	0.282	<0.001%
chr1_911364_C_T	chr1:911364	-0.058	-0.001	-0.282	0.0013%
chr1_919770_C_T	chr1:919770	0.145	0.096	0.282	<0.001%
chr1_870104_C_T	chr1:870104	0.048	0.041	0.279	<0.001%
chr1_870044_C_T	chr1:870044	0.042	0.037	0.276	<0.001%
chr1_904716_G_A	chr1:904716	0.056	0.038	0.271	<0.001%
chr1_904736_C_T	chr1:904736	0.013	0.030	0.271	<0.001%
chr1_912959_C_T	chr1:912959	-0.037	-0.029	-0.271	0.0020%
chr1_904660_C_G	chr1:904660	-0.079	-0.003	0.265	<0.001%
chr1_870173_C_G	chr1:870173	0.131	0.023	0.262	<0.001%
chr1_869928_G_A	chr1:869928	0.007	0.060	0.259	<0.001%
chr1_870104_C_A	chr1:870104	0.039	0.022	0.259	<0.001%
chr1_904557_C_A	chr1:904557	0.063	0.007	0.259	0.0011%
chr1_904681_T_G	chr1:904681	-0.010	-0.037	-0.259	0.011%
chr1_906982_C_G	chr1:906982	0.032	0.038	-0.259	<0.001%
chr1_921174_C_G	chr1:921174	0.100	0.027	0.259	—
chr1_921181_T_G	chr1:921181	-0.079	-0.056	-0.259	—
chr1_904827_G_T	chr1:904827	-0.146	0.016	0.044	<0.001%
chr1_904722_T_G	chr1:904722	-0.026	-0.049	-0.256	0.0013%
chr1_861111_G_A	chr1:861111	0.070	-0.001	0.253	<0.001%
chr1_870022_A_C	chr1:870022	0.082	-0.030	-0.253	<0.001%
chr1_870055_G_A	chr1:870055	-0.058	0.038	0.253	<0.001%
chr1_906893_A_G	chr1:906893	-0.024	-0.003	-0.253	<0.001%
chr1_921192_C_G	chr1:921192	0.121	0.008	0.253	<0.001%
chr1_921192_C_T	chr1:921192	0.132	0.107	0.253	—
chr1_904672_G_A	chr1:904672	0.054	0.034	0.247	<0.001%
chr1_912825_A_C	chr1:912825	-0.012	0.047	0.247	0.0013%
chr1_912881_G_A	chr1:912881	-0.048	-0.043	-0.247	0.0020%
chr1_921188_T_G	chr1:921188	-0.131	-0.145	-0.247	—
chr1_904728_G_C	chr1:904728	0.138	0.014	0.188	<0.001%
chr1_904822_G_A	chr1:904822	-0.137	0.008	0.079	0.0033%
chr1_904572_A_G	chr1:904572	0.032	-0.006	0.241	0.0031%
chr1_904849_C_T	chr1:904849	0.124	0.021	0.241	0.0099%
chr1_904881_A_G	chr1:904881	0.106	0.060	0.241	0.0013%
chr1_904792_C_A	chr1:904792	-0.135	0.007	-0.088	0.0079%
chr1_869838_C_T	chr1:869838	0.135	0.019	0.153	<0.001%
chr1_861197_C_G	chr1:861197	0.089	0.169	0.235	0.0013%
chr1_904536_G_A	chr1:904536	0.011	0.011	0.235	0.019%
chr1_861150_G_A	chr1:861150	-0.062	-0.049	-0.232	<0.001%
chr1_870021_G_A	chr1:870021	-0.030	0.039	0.229	0.0092%
chr1_904580_T_G	chr1:904580	0.015	0.008	-0.229	0.382%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.