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LAMA3
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near LAMA3
chr18:23,589,452..24,055,065, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr18_23618983_G_T | chr18:23618983 | 1.000 | 1.000 | 1.000 | 0.0013% |
| chr18_23619104_C_G | chr18:23619104 | 0.586 | 0.284 | 1.000 | — |
| chr18_23619190_A_G | chr18:23619190 | 0.243 | 0.383 | 1.000 | — |
| chr18_23618962_G_A | chr18:23618962 | -0.383 | -0.442 | -0.956 | <0.001% |
| chr18_23619146_G_T | chr18:23619146 | 0.501 | 0.457 | 0.747 | — |
| chr18_23619674_C_G | chr18:23619674 | -0.256 | -0.269 | -0.882 | — |
| chr18_23619672_G_C | chr18:23619672 | 0.138 | 0.266 | 0.859 | — |
| chr18_23619145_G_C | chr18:23619145 | 0.449 | 0.234 | 0.653 | — |
| chr18_23619145_G_T | chr18:23619145 | 0.443 | 0.302 | 0.476 | — |
| chr18_23618982_G_A | chr18:23618982 | -0.439 | -0.489 | -0.738 | <0.001% |
| chr18_23619110_G_T | chr18:23619110 | 0.256 | 0.264 | 0.735 | <0.001% |
| chr18_23619655_C_T | chr18:23619655 | -0.218 | -0.135 | -0.706 | — |
| chr18_23619349_C_T | chr18:23619349 | -0.256 | -0.305 | -0.694 | 0.0013% |
| chr18_23619144_G_C | chr18:23619144 | 0.384 | 0.188 | 0.659 | — |
| chr18_23612413_A_G | chr18:23612413 | 0.383 | 0.368 | 0.271 | <0.001% |
| chr18_23619548_G_C | chr18:23619548 | -0.161 | -0.142 | -0.659 | 0.0013% |
| chr18_23619149_T_A | chr18:23619149 | 0.369 | 0.617 | 0.312 | — |
| chr18_23619144_G_A | chr18:23619144 | 0.368 | 0.277 | 0.429 | 0.0013% |
| chr18_23619644_G_A | chr18:23619644 | 0.368 | 0.327 | 0.641 | — |
| chr18_23619665_G_C | chr18:23619665 | 0.070 | 0.109 | 0.647 | — |
| chr18_23619646_C_G | chr18:23619646 | -0.363 | -0.112 | -0.488 | — |
| chr18_23619178_A_G | chr18:23619178 | 0.170 | 0.216 | 0.635 | — |
| chr18_23618985_C_T | chr18:23618985 | -0.270 | -0.339 | -0.626 | 0.0013% |
| chr18_23606103_G_T | chr18:23606103 | -0.354 | -0.218 | -0.209 | 0.0059% |
| chr18_23619365_G_T | chr18:23619365 | -0.166 | -0.157 | -0.624 | 0.0013% |
| chr18_23619115_C_T | chr18:23619115 | -0.191 | -0.223 | -0.618 | — |
| chr18_23619145_G_A | chr18:23619145 | 0.346 | 0.150 | 0.424 | — |
| chr18_23618972_G_T | chr18:23618972 | -0.329 | -0.464 | -0.600 | <0.001% |
| chr18_23618963_T_C | chr18:23618963 | 0.225 | 0.429 | 0.594 | <0.001% |
| chr18_23619191_G_T | chr18:23619191 | -0.155 | -0.249 | -0.594 | — |
| chr18_23612299_A_G | chr18:23612299 | 0.333 | 0.497 | 0.376 | 0.019% |
| chr18_23619112_T_G | chr18:23619112 | 0.180 | 0.195 | 0.588 | — |
| chr18_23619165_A_G | chr18:23619165 | -0.103 | -0.155 | -0.588 | — |
| chr18_23612781_T_A | chr18:23612781 | -0.299 | -0.396 | -0.582 | 0.0039% |
| chr18_23619146_G_C | chr18:23619146 | 0.301 | 0.193 | 0.582 | — |
| chr18_23619109_G_A | chr18:23619109 | 0.155 | 0.183 | 0.576 | — |
| chr18_23619147_T_A | chr18:23619147 | 0.326 | 0.234 | 0.447 | — |
| chr18_23619366_G_A | chr18:23619366 | -0.140 | -0.198 | -0.576 | 0.0020% |
| chr18_23619498_T_C | chr18:23619498 | -0.220 | -0.198 | -0.576 | 0.0013% |
| chr18_23619596_T_C | chr18:23619596 | -0.293 | -0.127 | -0.571 | 0.0013% |
| chr18_23619190_A_T | chr18:23619190 | 0.319 | 0.363 | 0.529 | — |
| chr18_23612355_T_A | chr18:23612355 | 0.311 | 0.338 | 0.347 | <0.001% |
| chr18_23606125_T_G | chr18:23606125 | 0.310 | 0.317 | 0.426 | 0.0020% |
| chr18_23619110_G_C | chr18:23619110 | 0.196 | 0.173 | 0.547 | — |
| chr18_23619574_C_T | chr18:23619574 | -0.062 | -0.071 | -0.541 | <0.001% |
| chr18_23618952_G_A | chr18:23618952 | 0.298 | 0.208 | 0.459 | 0.0013% |
| chr18_23619146_G_A | chr18:23619146 | 0.295 | 0.137 | 0.512 | — |
| chr18_23619148_C_G | chr18:23619148 | 0.295 | 0.226 | 0.353 | <0.001% |
| chr18_23619531_G_A | chr18:23619531 | -0.201 | -0.160 | -0.506 | <0.001% |
| chr18_23619091_G_T | chr18:23619091 | -0.012 | 0.175 | 0.500 | — |
| chr18_23619529_A_G | chr18:23619529 | -0.146 | -0.193 | -0.500 | 0.0013% |
| chr18_23619647_G_C | chr18:23619647 | -0.153 | -0.165 | -0.500 | — |
| chr18_23619674_C_A | chr18:23619674 | -0.105 | -0.132 | -0.494 | — |
| chr18_23606212_A_G | chr18:23606212 | 0.279 | 0.340 | 0.294 | 0.0072% |
| chr18_23619109_G_C | chr18:23619109 | 0.175 | 0.188 | 0.488 | — |
| chr18_23619553_G_A | chr18:23619553 | -0.125 | -0.104 | -0.488 | <0.001% |
| chr18_23619111_A_C | chr18:23619111 | 0.108 | 0.150 | 0.482 | — |
| chr18_23619460_T_C | chr18:23619460 | 0.206 | 0.107 | 0.482 | 0.032% |
| chr18_23619605_C_G | chr18:23619605 | -0.225 | -0.152 | -0.476 | <0.001% |
| chr18_23619649_C_G | chr18:23619649 | -0.268 | -0.074 | -0.276 | — |
| chr18_23619091_G_C | chr18:23619091 | 0.017 | 0.117 | 0.471 | — |
| chr18_23619201_C_G | chr18:23619201 | 0.130 | 0.099 | 0.471 | — |
| chr18_23619087_G_C | chr18:23619087 | 0.141 | 0.132 | 0.465 | <0.001% |
| chr18_23612717_G_A | chr18:23612717 | -0.262 | -0.386 | -0.315 | 0.0072% |
| chr18_23619120_G_T | chr18:23619120 | 0.158 | 0.084 | 0.459 | — |
| chr18_23619114_A_G | chr18:23619114 | 0.062 | 0.185 | 0.453 | — |
| chr18_23619184_T_G | chr18:23619184 | 0.130 | 0.152 | 0.453 | — |
| chr18_23612350_T_C | chr18:23612350 | 0.255 | 0.284 | 0.365 | 0.0098% |
| chr18_23619138_T_G | chr18:23619138 | -0.098 | -0.102 | -0.441 | — |
| chr18_23619572_C_G | chr18:23619572 | 0.226 | 0.135 | 0.441 | <0.001% |
| chr18_23619143_G_T | chr18:23619143 | 0.248 | 0.208 | 0.406 | — |
| chr18_23619120_G_C | chr18:23619120 | 0.116 | 0.094 | 0.435 | — |
| chr18_23619184_T_A | chr18:23619184 | 0.136 | 0.173 | 0.435 | — |
| chr18_23619118_C_G | chr18:23619118 | -0.110 | -0.061 | -0.429 | — |
| chr18_23619660_A_C | chr18:23619660 | -0.030 | 0.056 | 0.429 | — |
| chr18_23618924_T_C | chr18:23618924 | -0.140 | -0.218 | -0.418 | <0.001% |
| chr18_23619207_G_T | chr18:23619207 | -0.190 | -0.198 | -0.418 | — |
| chr18_23619577_A_C | chr18:23619577 | 0.135 | 0.043 | 0.418 | <0.001% |
| chr18_23612283_G_A | chr18:23612283 | -0.168 | -0.147 | -0.412 | <0.001% |
| chr18_23619087_G_T | chr18:23619087 | -0.010 | 0.201 | 0.412 | — |
| chr18_23619124_A_G | chr18:23619124 | 0.108 | 0.132 | 0.412 | <0.001% |
| chr18_23619395_C_T | chr18:23619395 | 0.100 | 0.129 | 0.412 | <0.001% |
| chr18_23619664_G_C | chr18:23619664 | 0.130 | 0.091 | 0.412 | — |
| chr18_23612811_T_A | chr18:23612811 | -0.230 | -0.297 | -0.294 | 0.0046% |
| chr18_23619668_G_C | chr18:23619668 | -0.181 | -0.102 | -0.406 | — |
| chr18_23612812_A_G | chr18:23612812 | 0.226 | 0.490 | 0.356 | 0.0013% |
| chr18_23619125_A_G | chr18:23619125 | 0.027 | 0.150 | 0.394 | — |
| chr18_23619667_C_G | chr18:23619667 | -0.215 | -0.129 | -0.394 | — |
| chr18_23612259_A_G | chr18:23612259 | -0.220 | -0.137 | -0.241 | 0.0053% |
| chr18_23619183_C_G | chr18:23619183 | 0.100 | 0.140 | 0.388 | — |
| chr18_23619240_G_A | chr18:23619240 | -0.113 | -0.112 | -0.388 | 0.0020% |
| chr18_23619488_G_T | chr18:23619488 | -0.116 | -0.086 | -0.388 | 0.0026% |
| chr18_23619651_G_C | chr18:23619651 | 0.048 | 0.114 | 0.388 | — |
| chr18_23619208_G_T | chr18:23619208 | -0.218 | -0.201 | -0.382 | — |
| chr18_23619111_A_T | chr18:23619111 | 0.090 | 0.122 | 0.382 | — |
| chr18_23619417_A_G | chr18:23619417 | 0.123 | 0.157 | 0.376 | <0.001% |
| chr18_23612276_T_C | chr18:23612276 | -0.211 | -0.104 | -0.141 | <0.001% |
| chr18_23619079_C_T | chr18:23619079 | -0.097 | -0.142 | -0.371 | — |
| chr18_23619143_G_C | chr18:23619143 | 0.210 | 0.178 | 0.300 | — |
| chr18_23619038_T_C | chr18:23619038 | -0.206 | -0.195 | -0.241 | <0.001% |
| chr18_23606119_C_G | chr18:23606119 | -0.205 | -0.170 | -0.282 | <0.001% |
| chr18_23612296_C_T | chr18:23612296 | -0.203 | -0.157 | -0.294 | <0.001% |
| chr18_23619661_C_G | chr18:23619661 | -0.128 | -0.122 | -0.359 | — |
| chr18_23612301_C_T | chr18:23612301 | -0.068 | -0.239 | -0.353 | 0.0013% |
| chr18_23619104_C_T | chr18:23619104 | 0.193 | 0.294 | 0.353 | — |
| chr18_23619289_C_T | chr18:23619289 | -0.128 | -0.124 | -0.353 | 3.09% |
| chr18_23619095_C_G | chr18:23619095 | 0.151 | 0.066 | 0.347 | — |
| chr18_23619117_G_T | chr18:23619117 | 0.165 | 0.234 | 0.347 | — |
| chr18_23619142_A_C | chr18:23619142 | 0.165 | 0.165 | 0.347 | — |
| chr18_23619208_G_A | chr18:23619208 | -0.196 | -0.173 | -0.288 | — |
| chr18_23611909_T_C | chr18:23611909 | 0.195 | 0.048 | 0.159 | <0.001% |
| chr18_23619112_T_C | chr18:23619112 | 0.087 | 0.061 | 0.341 | — |
| chr18_23619116_G_C | chr18:23619116 | 0.138 | 0.198 | 0.341 | — |
| chr18_23619271_A_G | chr18:23619271 | 0.145 | 0.165 | 0.341 | 0.131% |
| chr18_23619657_G_A | chr18:23619657 | -0.032 | -0.066 | 0.341 | — |
| chr18_23612270_G_A | chr18:23612270 | -0.120 | -0.114 | -0.335 | 0.0013% |
| chr18_23619163_G_T | chr18:23619163 | -0.083 | -0.135 | -0.329 | — |
| chr18_23619350_A_C | chr18:23619350 | -0.050 | -0.206 | -0.329 | 0.0013% |
| chr18_23619490_C_T | chr18:23619490 | -0.103 | -0.112 | -0.329 | <0.001% |
| chr18_23619666_G_A | chr18:23619666 | 0.082 | 0.036 | 0.329 | — |
| chr18_23612776_G_C | chr18:23612776 | 0.186 | 0.259 | 0.282 | 0.0013% |
| chr18_23618990_T_C | chr18:23618990 | 0.183 | 0.266 | 0.279 | <0.001% |
| chr18_23619162_A_G | chr18:23619162 | 0.002 | -0.074 | -0.324 | — |
| chr18_23619673_G_A | chr18:23619673 | -0.130 | -0.119 | -0.324 | <0.001% |
| chr18_23612772_G_A | chr18:23612772 | -0.181 | -0.292 | -0.247 | 0.0013% |
| chr18_23612802_G_T | chr18:23612802 | -0.135 | -0.216 | -0.318 | 0.0013% |
| chr18_23619107_G_T | chr18:23619107 | -0.110 | -0.107 | -0.318 | — |
| chr18_23619124_A_C | chr18:23619124 | 0.090 | 0.107 | 0.318 | — |
| chr18_23619667_C_T | chr18:23619667 | -0.100 | -0.069 | -0.318 | — |
| chr18_23606176_C_T | chr18:23606176 | -0.178 | -0.234 | -0.288 | 0.0013% |
| chr18_23619093_A_G | chr18:23619093 | 0.048 | 0.102 | 0.312 | — |
| chr18_23619581_C_T | chr18:23619581 | -0.106 | -0.096 | -0.312 | <0.001% |
| chr18_23619074_A_G | chr18:23619074 | -0.148 | -0.234 | -0.306 | — |
| chr18_23619079_C_G | chr18:23619079 | -0.116 | -0.140 | -0.306 | — |
| chr18_23619097_G_T | chr18:23619097 | -0.053 | -0.099 | -0.306 | — |
| chr18_23619143_G_A | chr18:23619143 | 0.161 | 0.277 | 0.306 | <0.001% |
| chr18_23619346_G_C | chr18:23619346 | 0.150 | -0.066 | 0.306 | 0.050% |
| chr18_23619549_G_T | chr18:23619549 | -0.115 | -0.086 | -0.306 | <0.001% |
| chr18_23619572_C_A | chr18:23619572 | 0.161 | 0.119 | 0.306 | 0.0020% |
| chr18_23606109_A_G | chr18:23606109 | 0.093 | 0.190 | 0.303 | 0.0013% |
| chr18_23619074_A_C | chr18:23619074 | -0.135 | -0.198 | -0.300 | — |
| chr18_23619645_G_A | chr18:23619645 | -0.098 | -0.069 | -0.300 | — |
| chr18_23612336_A_G | chr18:23612336 | 0.166 | 0.119 | 0.212 | 0.0013% |
| chr18_23619024_G_C | chr18:23619024 | -0.166 | -0.142 | -0.147 | <0.001% |
| chr18_23619179_G_C | chr18:23619179 | 0.043 | 0.051 | 0.294 | — |
| chr18_23619190_A_C | chr18:23619190 | 0.090 | 0.114 | 0.294 | — |
| chr18_23619200_C_T | chr18:23619200 | -0.126 | -0.142 | -0.294 | <0.001% |
| chr18_23619306_G_A | chr18:23619306 | 0.090 | 0.155 | 0.294 | 0.0033% |
| chr18_23619374_C_A | chr18:23619374 | -0.075 | -0.086 | -0.294 | <0.001% |
| chr18_23619410_C_T | chr18:23619410 | -0.103 | -0.069 | -0.294 | <0.001% |
| chr18_23619643_A_G | chr18:23619643 | -0.166 | -0.058 | -0.218 | — |
| chr18_23618996_A_C | chr18:23618996 | -0.128 | -0.209 | -0.291 | <0.001% |
| chr18_23606146_G_C | chr18:23606146 | -0.164 | -0.201 | -0.118 | <0.001% |
| chr18_23619051_A_T | chr18:23619051 | -0.133 | -0.147 | -0.288 | <0.001% |
| chr18_23619442_T_G | chr18:23619442 | -0.161 | 0.028 | -0.129 | <0.001% |
| chr18_23619106_A_T | chr18:23619106 | -0.126 | -0.145 | -0.282 | 0.0020% |
| chr18_23619147_T_C | chr18:23619147 | 0.133 | 0.112 | 0.282 | 0.0013% |
| chr18_23619177_C_T | chr18:23619177 | -0.045 | -0.066 | -0.282 | — |
| chr18_23619208_G_C | chr18:23619208 | -0.160 | -0.140 | -0.094 | 0.0013% |
| chr18_23619226_G_A | chr18:23619226 | -0.047 | -0.107 | -0.282 | <0.001% |
| chr18_23619279_C_A | chr18:23619279 | -0.093 | -0.084 | -0.282 | <0.001% |
| chr18_23619375_C_T | chr18:23619375 | -0.068 | -0.051 | -0.282 | <0.001% |
| chr18_23619674_C_T | chr18:23619674 | -0.057 | -0.061 | -0.282 | — |
| chr18_23619126_C_T | chr18:23619126 | -0.158 | 0.000 | -0.141 | — |
| chr18_23619207_G_A | chr18:23619207 | -0.158 | -0.175 | -0.271 | — |
| chr18_23612760_A_G | chr18:23612760 | -0.156 | -0.173 | -0.238 | 0.033% |
| chr18_23619074_A_T | chr18:23619074 | -0.123 | -0.173 | -0.276 | — |
| chr18_23619079_C_A | chr18:23619079 | -0.135 | -0.147 | -0.276 | 0.0059% |
| chr18_23619133_C_T | chr18:23619133 | -0.116 | -0.112 | -0.276 | — |
| chr18_23619180_G_C | chr18:23619180 | 0.100 | 0.117 | 0.276 | — |
| chr18_23619206_A_C | chr18:23619206 | 0.093 | 0.102 | 0.271 | <0.001% |
| chr18_23619227_C_T | chr18:23619227 | -0.058 | -0.145 | -0.271 | <0.001% |
| chr18_23619328_C_T | chr18:23619328 | -0.067 | -0.107 | -0.271 | <0.001% |
| chr18_23619652_C_T | chr18:23619652 | -0.068 | -0.020 | -0.271 | 0.0013% |
| chr18_23619654_G_T | chr18:23619654 | -0.083 | -0.030 | -0.271 | — |
| chr18_23619133_C_G | chr18:23619133 | -0.151 | -0.036 | -0.182 | — |
| chr18_23619072_A_T | chr18:23619072 | -0.125 | -0.203 | -0.265 | — |
| chr18_23619088_G_C | chr18:23619088 | 0.023 | 0.056 | 0.265 | — |
| chr18_23619101_A_G | chr18:23619101 | -0.125 | 0.053 | 0.265 | — |
| chr18_23619491_G_T | chr18:23619491 | -0.010 | -0.071 | -0.265 | <0.001% |
| chr18_23619675_C_G | chr18:23619675 | 0.150 | 0.063 | 0.047 | — |
| chr18_23612792_G_T | chr18:23612792 | -0.148 | -0.269 | -0.188 | <0.001% |
| chr18_23619646_C_T | chr18:23619646 | -0.148 | -0.058 | -0.224 | — |
| chr18_23612348_T_A | chr18:23612348 | 0.123 | 0.180 | 0.259 | 0.0020% |
| chr18_23619088_G_T | chr18:23619088 | 0.111 | 0.069 | 0.259 | — |
| chr18_23619098_C_T | chr18:23619098 | -0.060 | -0.089 | -0.259 | — |
| chr18_23619132_A_G | chr18:23619132 | -0.146 | 0.114 | -0.059 | — |
| chr18_23619166_G_T | chr18:23619166 | -0.077 | -0.150 | -0.259 | — |
| chr18_23619203_G_T | chr18:23619203 | -0.057 | -0.081 | -0.259 | — |
| chr18_23619325_A_C | chr18:23619325 | -0.093 | -0.109 | -0.259 | 0.0013% |
| chr18_23619657_G_C | chr18:23619657 | -0.097 | -0.099 | -0.259 | — |
| chr18_23619665_G_A | chr18:23619665 | 0.053 | 0.008 | 0.259 | — |
| chr18_23619085_T_A | chr18:23619085 | -0.003 | -0.109 | -0.253 | — |
| chr18_23619100_G_T | chr18:23619100 | -0.062 | -0.117 | -0.253 | — |
| chr18_23619165_A_C | chr18:23619165 | 0.103 | 0.112 | 0.253 | — |
| chr18_23619329_T_G | chr18:23619329 | 0.143 | 0.041 | 0.024 | <0.001% |
| chr18_23619648_G_A | chr18:23619648 | -0.106 | -0.058 | -0.253 | — |
| chr18_23619665_G_T | chr18:23619665 | 0.020 | 0.008 | 0.253 | — |
| chr18_23612786_T_G | chr18:23612786 | -0.131 | -0.155 | -0.250 | <0.001% |
| chr18_23619083_A_C | chr18:23619083 | -0.085 | -0.145 | -0.247 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.