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LINC01970
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near LINC01970
chr17:82,190,045..82,392,814, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_82230140_G_C | chr17:82230140 | 0.166 | 0.457 | 0.835 | — |
| chr17_82230048_T_G | chr17:82230048 | 0.141 | 0.320 | 0.494 | — |
| chr17_82230079_T_A | chr17:82230079 | 0.145 | 0.315 | 0.482 | — |
| chr17_82230112_C_A | chr17:82230112 | 0.201 | 0.320 | 0.424 | — |
| chr17_82237898_G_C | chr17:82237898 | 0.235 | -0.010 | 0.106 | — |
| chr17_82237898_G_T | chr17:82237898 | 0.233 | 0.006 | 0.082 | — |
| chr17_82237894_G_T | chr17:82237894 | 0.223 | -0.033 | -0.059 | — |
| chr17_82237894_G_A | chr17:82237894 | 0.210 | -0.033 | -0.059 | — |
| chr17_82237894_G_C | chr17:82237894 | 0.210 | -0.032 | -0.024 | — |
| chr17_82230074_A_G | chr17:82230074 | -0.113 | -0.183 | -0.353 | — |
| chr17_82230170_G_C | chr17:82230170 | 0.136 | 0.236 | 0.353 | — |
| chr17_82237898_G_A | chr17:82237898 | 0.190 | 0.011 | 0.118 | — |
| chr17_82230070_T_C | chr17:82230070 | 0.118 | 0.195 | 0.329 | — |
| chr17_82230071_G_C | chr17:82230071 | 0.126 | 0.244 | 0.329 | — |
| chr17_82230110_C_A | chr17:82230110 | -0.088 | -0.259 | -0.318 | — |
| chr17_82230101_G_A | chr17:82230101 | -0.110 | -0.287 | -0.306 | — |
| chr17_82230102_T_A | chr17:82230102 | -0.130 | -0.277 | -0.306 | — |
| chr17_82237897_A_T | chr17:82237897 | 0.170 | -0.009 | 0.094 | — |
| chr17_82230072_G_A | chr17:82230072 | 0.150 | 0.277 | 0.294 | — |
| chr17_82230100_A_G | chr17:82230100 | -0.135 | -0.198 | -0.294 | — |
| chr17_82230101_G_T | chr17:82230101 | -0.111 | -0.294 | -0.294 | — |
| chr17_82230108_G_A | chr17:82230108 | -0.110 | -0.277 | -0.294 | — |
| chr17_82237893_G_C | chr17:82237893 | 0.163 | -0.020 | 0.012 | — |
| chr17_82230110_C_G | chr17:82230110 | -0.110 | -0.272 | -0.282 | — |
| chr17_82230112_C_G | chr17:82230112 | 0.111 | 0.170 | 0.282 | — |
| chr17_82237897_A_G | chr17:82237897 | 0.156 | -0.006 | 0.071 | — |
| chr17_82230072_G_T | chr17:82230072 | 0.093 | 0.145 | 0.259 | — |
| chr17_82230073_G_A | chr17:82230073 | 0.108 | 0.168 | 0.259 | — |
| chr17_82230085_C_G | chr17:82230085 | 0.060 | 0.145 | 0.259 | — |
| chr17_82230090_G_C | chr17:82230090 | 0.068 | 0.074 | 0.259 | — |
| chr17_82230101_G_C | chr17:82230101 | -0.106 | -0.292 | -0.259 | — |
| chr17_82237896_G_C | chr17:82237896 | 0.143 | -0.001 | 0.165 | — |
| chr17_82230100_A_T | chr17:82230100 | -0.128 | -0.236 | -0.247 | — |
| chr17_82230107_G_C | chr17:82230107 | -0.083 | -0.216 | -0.247 | — |
| chr17_82230107_G_T | chr17:82230107 | -0.057 | -0.188 | -0.247 | — |
| chr17_82230108_G_C | chr17:82230108 | -0.111 | -0.274 | -0.247 | — |
| chr17_82230109_T_A | chr17:82230109 | -0.101 | -0.259 | -0.247 | — |
| chr17_82230111_C_G | chr17:82230111 | 0.058 | 0.145 | 0.247 | — |
| chr17_82230142_T_C | chr17:82230142 | 0.077 | 0.066 | 0.247 | — |
| chr17_82230144_G_C | chr17:82230144 | 0.101 | 0.129 | 0.247 | — |
| chr17_82237893_G_T | chr17:82237893 | 0.138 | -0.011 | 0.012 | — |
| chr17_82230102_T_C | chr17:82230102 | -0.135 | -0.297 | -0.235 | — |
| chr17_82230092_G_C | chr17:82230092 | 0.067 | 0.122 | 0.235 | — |
| chr17_82230100_A_C | chr17:82230100 | -0.133 | -0.239 | -0.200 | — |
| chr17_82230104_C_T | chr17:82230104 | -0.108 | -0.198 | -0.235 | — |
| chr17_82230108_G_T | chr17:82230108 | -0.106 | -0.272 | -0.235 | — |
| chr17_82230116_T_G | chr17:82230116 | 0.032 | 0.056 | 0.235 | — |
| chr17_82230145_G_C | chr17:82230145 | 0.085 | 0.168 | 0.235 | — |
| chr17_82230145_G_T | chr17:82230145 | 0.116 | 0.226 | 0.235 | — |
| chr17_82230169_A_C | chr17:82230169 | 0.080 | 0.152 | 0.235 | — |
| chr17_82237895_T_C | chr17:82237895 | 0.131 | -0.037 | 0.024 | 0.0013% |
| chr17_82237895_T_A | chr17:82237895 | 0.130 | -0.030 | 0.012 | — |
| chr17_82237895_T_G | chr17:82237895 | 0.130 | -0.036 | 0.024 | — |
| chr17_82230072_G_C | chr17:82230072 | 0.058 | 0.053 | 0.224 | — |
| chr17_82230074_A_T | chr17:82230074 | -0.105 | -0.193 | -0.224 | <0.001% |
| chr17_82230115_C_G | chr17:82230115 | 0.111 | 0.236 | 0.224 | — |
| chr17_82230163_T_G | chr17:82230163 | 0.022 | 0.081 | 0.224 | — |
| chr17_82230106_A_G | chr17:82230106 | -0.123 | -0.259 | -0.188 | — |
| chr17_82237897_A_C | chr17:82237897 | 0.123 | -0.010 | 0.059 | — |
| chr17_82237893_G_A | chr17:82237893 | 0.121 | -0.009 | 0.024 | — |
| chr17_82230050_G_C | chr17:82230050 | -0.062 | -0.114 | -0.212 | — |
| chr17_82230068_G_C | chr17:82230068 | 0.070 | 0.117 | 0.212 | — |
| chr17_82230078_C_G | chr17:82230078 | 0.068 | 0.119 | 0.212 | — |
| chr17_82230090_G_T | chr17:82230090 | 0.063 | 0.104 | 0.212 | — |
| chr17_82230092_G_A | chr17:82230092 | 0.098 | 0.129 | 0.212 | — |
| chr17_82230102_T_G | chr17:82230102 | -0.120 | -0.249 | -0.188 | — |
| chr17_82230107_G_A | chr17:82230107 | 0.120 | 0.211 | 0.141 | — |
| chr17_82230140_G_T | chr17:82230140 | 0.090 | 0.180 | 0.212 | — |
| chr17_82230142_T_G | chr17:82230142 | -0.085 | -0.079 | -0.212 | — |
| chr17_82230171_G_C | chr17:82230171 | 0.062 | 0.041 | 0.212 | — |
| chr17_82230171_G_T | chr17:82230171 | 0.095 | 0.112 | 0.212 | — |
| chr17_82230048_T_A | chr17:82230048 | 0.027 | 0.033 | 0.200 | — |
| chr17_82230073_G_C | chr17:82230073 | 0.083 | 0.058 | 0.200 | — |
| chr17_82230085_C_A | chr17:82230085 | 0.073 | 0.185 | 0.200 | — |
| chr17_82230085_C_T | chr17:82230085 | 0.072 | 0.198 | 0.200 | <0.001% |
| chr17_82230092_G_T | chr17:82230092 | 0.092 | 0.112 | 0.200 | — |
| chr17_82237915_A_G | chr17:82237915 | 0.088 | 0.004 | 0.200 | 0.236% |
| chr17_82237923_A_C | chr17:82237923 | -0.018 | -0.034 | -0.200 | — |
| chr17_82230106_A_C | chr17:82230106 | -0.110 | -0.259 | -0.118 | — |
| chr17_82230050_G_T | chr17:82230050 | -0.040 | -0.091 | -0.188 | — |
| chr17_82230104_C_A | chr17:82230104 | -0.083 | -0.135 | -0.188 | — |
| chr17_82230104_C_G | chr17:82230104 | -0.101 | -0.195 | -0.188 | — |
| chr17_82230109_T_C | chr17:82230109 | -0.106 | -0.266 | -0.165 | — |
| chr17_82230106_A_T | chr17:82230106 | -0.103 | -0.256 | -0.153 | — |
| chr17_82230109_T_G | chr17:82230109 | -0.101 | -0.277 | -0.153 | — |
| chr17_82230043_G_T | chr17:82230043 | 0.038 | 0.041 | 0.176 | — |
| chr17_82230079_T_G | chr17:82230079 | 0.042 | 0.071 | 0.176 | — |
| chr17_82230087_G_T | chr17:82230087 | -0.050 | -0.079 | -0.176 | — |
| chr17_82230095_C_A | chr17:82230095 | -0.047 | -0.099 | -0.176 | — |
| chr17_82230096_G_A | chr17:82230096 | 0.058 | 0.117 | 0.176 | — |
| chr17_82230103_C_G | chr17:82230103 | -0.075 | -0.168 | -0.176 | 0.012% |
| chr17_82230114_G_C | chr17:82230114 | -0.083 | -0.135 | -0.176 | — |
| chr17_82237925_A_C | chr17:82237925 | -0.012 | -0.057 | -0.176 | — |
| chr17_82230098_G_A | chr17:82230098 | 0.095 | 0.170 | 0.153 | — |
| chr17_82230036_A_C | chr17:82230036 | 0.013 | 0.030 | 0.165 | — |
| chr17_82230038_G_T | chr17:82230038 | -0.002 | -0.053 | -0.165 | — |
| chr17_82230043_G_A | chr17:82230043 | 0.030 | 0.061 | 0.165 | — |
| chr17_82230065_A_G | chr17:82230065 | 0.017 | 0.005 | 0.165 | — |
| chr17_82230073_G_T | chr17:82230073 | 0.055 | 0.020 | 0.165 | — |
| chr17_82230077_T_A | chr17:82230077 | 0.053 | 0.071 | 0.165 | — |
| chr17_82230077_T_C | chr17:82230077 | 0.023 | 0.048 | 0.165 | — |
| chr17_82230082_T_G | chr17:82230082 | -0.053 | -0.140 | -0.165 | — |
| chr17_82230095_C_T | chr17:82230095 | -0.037 | -0.102 | -0.165 | 0.026% |
| chr17_82230097_G_C | chr17:82230097 | 0.057 | 0.084 | 0.165 | — |
| chr17_82230099_G_T | chr17:82230099 | -0.067 | -0.152 | -0.165 | — |
| chr17_82230111_C_A | chr17:82230111 | 0.030 | 0.091 | 0.165 | — |
| chr17_82230116_T_A | chr17:82230116 | -0.027 | -0.089 | -0.165 | — |
| chr17_82230128_G_A | chr17:82230128 | -0.035 | -0.033 | -0.165 | <0.001% |
| chr17_82230128_G_T | chr17:82230128 | -0.012 | -0.008 | -0.165 | <0.001% |
| chr17_82230136_G_A | chr17:82230136 | -0.045 | -0.076 | -0.165 | — |
| chr17_82230141_G_C | chr17:82230141 | 0.067 | 0.081 | 0.165 | — |
| chr17_82237815_A_C | chr17:82237815 | -0.025 | -0.030 | -0.165 | — |
| chr17_82230144_G_A | chr17:82230144 | 0.090 | 0.109 | 0.047 | — |
| chr17_82230043_G_C | chr17:82230043 | 0.020 | 0.000 | 0.153 | — |
| chr17_82230063_A_G | chr17:82230063 | 0.027 | 0.041 | 0.153 | — |
| chr17_82230082_T_C | chr17:82230082 | 0.030 | 0.071 | 0.153 | — |
| chr17_82230095_C_G | chr17:82230095 | -0.063 | -0.117 | -0.153 | — |
| chr17_82230119_A_T | chr17:82230119 | -0.018 | -0.046 | -0.153 | — |
| chr17_82230129_C_T | chr17:82230129 | -0.007 | -0.056 | -0.153 | — |
| chr17_82230170_G_A | chr17:82230170 | 0.043 | 0.071 | 0.153 | 0.039% |
| chr17_82230036_A_T | chr17:82230036 | 0.007 | 0.010 | 0.141 | — |
| chr17_82230041_C_A | chr17:82230041 | 0.007 | 0.069 | 0.141 | — |
| chr17_82230045_G_C | chr17:82230045 | 0.037 | 0.025 | 0.141 | — |
| chr17_82230046_G_T | chr17:82230046 | -0.023 | -0.084 | -0.141 | — |
| chr17_82230049_T_G | chr17:82230049 | 0.025 | 0.063 | 0.141 | — |
| chr17_82230069_G_C | chr17:82230069 | 0.027 | -0.010 | 0.141 | — |
| chr17_82230078_C_T | chr17:82230078 | 0.017 | 0.074 | 0.141 | — |
| chr17_82230093_G_A | chr17:82230093 | 0.037 | 0.033 | 0.141 | — |
| chr17_82230114_G_T | chr17:82230114 | -0.018 | -0.063 | -0.141 | — |
| chr17_82230127_G_T | chr17:82230127 | 0.023 | 0.102 | 0.141 | — |
| chr17_82230134_A_C | chr17:82230134 | 0.028 | 0.056 | 0.141 | — |
| chr17_82230136_G_T | chr17:82230136 | -0.012 | -0.048 | -0.141 | — |
| chr17_82230138_C_T | chr17:82230138 | -0.067 | -0.140 | -0.141 | — |
| chr17_82230143_G_C | chr17:82230143 | 0.037 | 0.036 | 0.141 | — |
| chr17_82230161_G_T | chr17:82230161 | -0.020 | -0.030 | -0.141 | — |
| chr17_82230169_A_G | chr17:82230169 | -0.023 | 0.008 | -0.141 | — |
| chr17_82230172_G_C | chr17:82230172 | 0.043 | 0.038 | 0.141 | — |
| chr17_82237819_A_C | chr17:82237819 | -0.030 | -0.019 | -0.141 | — |
| chr17_82237914_C_A | chr17:82237914 | -0.028 | -0.011 | -0.141 | — |
| chr17_82237896_G_T | chr17:82237896 | 0.078 | 0.003 | 0.129 | <0.001% |
| chr17_82249341_A_C | chr17:82249341 | -0.013 | -0.030 | -0.135 | <0.001% |
| chr17_82230144_G_T | chr17:82230144 | 0.075 | 0.051 | 0.082 | — |
| chr17_82230051_T_G | chr17:82230051 | 0.008 | 0.036 | 0.129 | — |
| chr17_82230089_T_G | chr17:82230089 | -0.043 | -0.061 | -0.129 | — |
| chr17_82230091_G_C | chr17:82230091 | 0.040 | 0.061 | 0.129 | — |
| chr17_82230096_G_C | chr17:82230096 | 0.060 | 0.091 | 0.129 | — |
| chr17_82230103_C_A | chr17:82230103 | -0.060 | -0.160 | -0.129 | — |
| chr17_82230122_G_T | chr17:82230122 | -0.025 | -0.058 | -0.129 | — |
| chr17_82230132_G_C | chr17:82230132 | 0.027 | -0.008 | 0.129 | — |
| chr17_82230138_C_A | chr17:82230138 | -0.060 | -0.132 | -0.129 | — |
| chr17_82230148_C_G | chr17:82230148 | 0.022 | 0.089 | 0.129 | — |
| chr17_82237883_C_A | chr17:82237883 | 0.015 | 0.022 | 0.129 | — |
| chr17_82237911_A_C | chr17:82237911 | -0.010 | -0.029 | -0.129 | — |
| chr17_82230105_A_T | chr17:82230105 | -0.072 | -0.190 | -0.059 | — |
| chr17_82230105_A_G | chr17:82230105 | -0.070 | -0.190 | -0.094 | — |
| chr17_82249344_A_C | chr17:82249344 | -0.013 | -0.015 | -0.124 | — |
| chr17_82230037_G_C | chr17:82230037 | 0.008 | -0.003 | 0.118 | — |
| chr17_82230060_A_G | chr17:82230060 | -0.030 | -0.063 | -0.118 | — |
| chr17_82230070_T_A | chr17:82230070 | 0.053 | 0.089 | 0.118 | — |
| chr17_82230082_T_A | chr17:82230082 | -0.047 | -0.104 | -0.118 | — |
| chr17_82230084_T_A | chr17:82230084 | 0.042 | 0.094 | 0.118 | — |
| chr17_82230088_T_A | chr17:82230088 | 0.025 | 0.018 | 0.118 | — |
| chr17_82230088_T_C | chr17:82230088 | 0.023 | 0.043 | 0.118 | 0.0039% |
| chr17_82230105_A_C | chr17:82230105 | -0.067 | -0.190 | -0.059 | — |
| chr17_82230135_A_G | chr17:82230135 | 0.015 | 0.084 | 0.118 | — |
| chr17_82230136_G_C | chr17:82230136 | -0.032 | -0.086 | -0.118 | — |
| chr17_82230143_G_A | chr17:82230143 | 0.013 | -0.028 | -0.118 | 0.0013% |
| chr17_82230161_G_C | chr17:82230161 | -0.032 | -0.053 | -0.118 | — |
| chr17_82237810_T_G | chr17:82237810 | -0.015 | -0.011 | -0.118 | — |
| chr17_82237883_C_G | chr17:82237883 | 0.018 | -0.003 | 0.118 | <0.001% |
| chr17_82237883_C_T | chr17:82237883 | 0.017 | 0.011 | 0.118 | — |
| chr17_82237892_A_T | chr17:82237892 | 0.038 | -0.003 | 0.118 | — |
| chr17_82230168_G_C | chr17:82230168 | 0.063 | 0.076 | 0.082 | — |
| chr17_82230171_G_A | chr17:82230171 | 0.062 | 0.061 | 0.106 | — |
| chr17_82230046_G_C | chr17:82230046 | 0.035 | 0.041 | 0.106 | — |
| chr17_82230053_C_T | chr17:82230053 | -0.012 | 0.000 | -0.106 | 1.55% |
| chr17_82230054_A_T | chr17:82230054 | -0.025 | -0.008 | -0.106 | — |
| chr17_82230067_G_A | chr17:82230067 | 0.058 | 0.183 | 0.106 | 0.0013% |
| chr17_82230067_G_C | chr17:82230067 | 0.030 | 0.084 | 0.106 | — |
| chr17_82230078_C_A | chr17:82230078 | 0.040 | 0.091 | 0.106 | — |
| chr17_82230084_T_C | chr17:82230084 | 0.020 | 0.043 | 0.106 | — |
| chr17_82230091_G_T | chr17:82230091 | 0.032 | 0.056 | 0.106 | — |
| chr17_82230094_C_G | chr17:82230094 | 0.003 | -0.020 | -0.106 | — |
| chr17_82230110_C_T | chr17:82230110 | -0.035 | -0.102 | -0.106 | <0.001% |
| chr17_82230112_C_T | chr17:82230112 | 0.050 | 0.071 | 0.106 | — |
| chr17_82230130_C_T | chr17:82230130 | -0.037 | -0.086 | -0.106 | <0.001% |
| chr17_82230137_T_A | chr17:82230137 | -0.017 | -0.089 | -0.106 | — |
| chr17_82230143_G_T | chr17:82230143 | 0.033 | 0.033 | 0.106 | — |
| chr17_82230151_G_T | chr17:82230151 | -0.003 | -0.025 | -0.106 | — |
| chr17_82230152_C_A | chr17:82230152 | -0.007 | -0.023 | -0.106 | — |
| chr17_82230153_C_A | chr17:82230153 | 0.002 | -0.015 | -0.106 | — |
| chr17_82230156_A_G | chr17:82230156 | 0.002 | -0.020 | 0.106 | — |
| chr17_82230162_C_A | chr17:82230162 | 0.000 | 0.008 | -0.106 | — |
| chr17_82237792_A_G | chr17:82237792 | -0.015 | -0.003 | -0.106 | — |
| chr17_82237905_G_C | chr17:82237905 | 0.005 | -0.008 | -0.106 | — |
| chr17_82230099_G_C | chr17:82230099 | -0.058 | -0.104 | -0.047 | — |
| chr17_82230139_A_G | chr17:82230139 | -0.055 | -0.135 | -0.094 | — |
| chr17_82230044_G_C | chr17:82230044 | 0.038 | 0.030 | 0.094 | — |
| chr17_82230063_A_C | chr17:82230063 | 0.008 | -0.008 | 0.094 | — |
| chr17_82230071_G_T | chr17:82230071 | 0.042 | 0.023 | 0.094 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.