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LLGL2
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near LLGL2
chr17:75,425,696..75,675,209, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_75515737_A_G | chr17:75515737 | -0.612 | -0.439 | -1.000 | — |
| chr17_75515740_T_G | chr17:75515740 | -0.729 | -0.551 | -1.000 | — |
| chr17_75468581_T_G | chr17:75468581 | 1.000 | 1.000 | 1.000 | — |
| chr17_75468575_A_T | chr17:75468575 | 0.824 | 0.774 | 1.000 | — |
| chr17_75515748_G_C | chr17:75515748 | 0.326 | 0.270 | 0.812 | — |
| chr17_75515750_C_G | chr17:75515750 | -0.309 | -0.250 | -0.776 | — |
| chr17_75515746_G_T | chr17:75515746 | 0.116 | 0.253 | 0.753 | 0.222% |
| chr17_75515745_T_G | chr17:75515745 | -0.270 | -0.217 | -0.729 | — |
| chr17_75513637_C_T | chr17:75513637 | 0.127 | 0.129 | 0.712 | — |
| chr17_75515747_G_C | chr17:75515747 | 0.220 | 0.202 | 0.682 | — |
| chr17_75515749_G_C | chr17:75515749 | 0.286 | 0.187 | 0.659 | — |
| chr17_75515735_A_G | chr17:75515735 | -0.236 | -0.173 | -0.635 | — |
| chr17_75515760_A_T | chr17:75515760 | 0.356 | 0.293 | 0.282 | — |
| chr17_75515741_G_C | chr17:75515741 | 0.353 | 0.258 | 0.329 | — |
| chr17_75515746_G_C | chr17:75515746 | 0.236 | 0.221 | 0.624 | — |
| chr17_75468598_G_A | chr17:75468598 | -0.344 | -0.231 | -0.488 | — |
| chr17_75468641_G_A | chr17:75468641 | 0.088 | 0.142 | 0.594 | <0.001% |
| chr17_75513652_A_C | chr17:75513652 | -0.123 | -0.190 | -0.588 | — |
| chr17_75515754_G_C | chr17:75515754 | -0.333 | -0.140 | -0.118 | — |
| chr17_75515748_G_A | chr17:75515748 | 0.233 | 0.175 | 0.565 | 0.0020% |
| chr17_75468610_G_A | chr17:75468610 | -0.291 | -0.204 | -0.541 | — |
| chr17_75515744_C_G | chr17:75515744 | -0.306 | -0.188 | -0.435 | — |
| chr17_75468598_G_C | chr17:75468598 | -0.298 | -0.192 | -0.406 | — |
| chr17_75515740_T_A | chr17:75515740 | -0.296 | -0.223 | -0.282 | — |
| chr17_75515754_G_T | chr17:75515754 | -0.293 | -0.131 | -0.176 | — |
| chr17_75513642_C_G | chr17:75513642 | 0.028 | 0.058 | 0.506 | — |
| chr17_75468707_C_G | chr17:75468707 | 0.250 | 0.217 | 0.500 | — |
| chr17_75515760_A_C | chr17:75515760 | 0.283 | 0.180 | 0.259 | — |
| chr17_75468577_T_C | chr17:75468577 | 0.280 | 0.277 | 0.412 | <0.001% |
| chr17_75515746_G_A | chr17:75515746 | 0.166 | 0.160 | 0.482 | — |
| chr17_75515747_G_T | chr17:75515747 | 0.130 | 0.184 | 0.482 | — |
| chr17_75515748_G_T | chr17:75515748 | 0.176 | 0.168 | 0.482 | — |
| chr17_75468601_A_C | chr17:75468601 | -0.266 | -0.216 | -0.365 | — |
| chr17_75468709_C_T | chr17:75468709 | -0.266 | -0.266 | -0.441 | 0.0013% |
| chr17_75513643_C_G | chr17:75513643 | 0.023 | 0.039 | 0.465 | — |
| chr17_75515736_G_A | chr17:75515736 | 0.260 | 0.213 | 0.282 | <0.001% |
| chr17_75515737_A_T | chr17:75515737 | -0.260 | -0.161 | -0.365 | — |
| chr17_75513642_C_A | chr17:75513642 | 0.023 | 0.065 | 0.453 | <0.001% |
| chr17_75513643_C_T | chr17:75513643 | 0.018 | 0.051 | 0.453 | — |
| chr17_75515754_G_A | chr17:75515754 | -0.256 | -0.123 | -0.153 | — |
| chr17_75513641_C_G | chr17:75513641 | 0.022 | 0.034 | 0.447 | — |
| chr17_75513642_C_T | chr17:75513642 | 0.018 | 0.070 | 0.447 | — |
| chr17_75515747_G_A | chr17:75515747 | 0.130 | 0.128 | 0.447 | — |
| chr17_75515749_G_A | chr17:75515749 | 0.253 | 0.143 | 0.376 | <0.001% |
| chr17_75515756_A_T | chr17:75515756 | -0.253 | -0.113 | -0.106 | — |
| chr17_75513641_C_T | chr17:75513641 | 0.020 | 0.063 | 0.441 | — |
| chr17_75515744_C_T | chr17:75515744 | -0.246 | -0.124 | -0.224 | — |
| chr17_75515761_G_T | chr17:75515761 | -0.246 | -0.121 | -0.106 | — |
| chr17_75468593_G_T | chr17:75468593 | 0.240 | 0.175 | 0.271 | — |
| chr17_75515742_A_G | chr17:75515742 | -0.236 | -0.199 | -0.376 | — |
| chr17_75515761_G_A | chr17:75515761 | -0.236 | -0.109 | -0.188 | — |
| chr17_75513611_T_C | chr17:75513611 | -0.041 | -0.061 | -0.406 | — |
| chr17_75513643_C_A | chr17:75513643 | 0.022 | 0.037 | 0.406 | — |
| chr17_75515757_C_A | chr17:75515757 | -0.230 | -0.065 | -0.118 | — |
| chr17_75468597_G_C | chr17:75468597 | -0.226 | -0.147 | -0.224 | — |
| chr17_75513640_C_G | chr17:75513640 | 0.032 | 0.049 | 0.400 | — |
| chr17_75513641_C_A | chr17:75513641 | 0.022 | 0.046 | 0.400 | — |
| chr17_75515735_A_C | chr17:75515735 | -0.013 | 0.016 | 0.400 | — |
| chr17_75513647_C_G | chr17:75513647 | 0.047 | 0.049 | 0.394 | — |
| chr17_75515737_A_C | chr17:75515737 | -0.223 | -0.138 | -0.200 | — |
| chr17_75515753_T_G | chr17:75515753 | -0.223 | -0.119 | -0.153 | — |
| chr17_75515757_C_G | chr17:75515757 | -0.223 | -0.074 | -0.082 | — |
| chr17_75513637_C_G | chr17:75513637 | 0.017 | 0.042 | 0.388 | — |
| chr17_75513638_C_G | chr17:75513638 | 0.003 | 0.042 | 0.388 | — |
| chr17_75513646_C_G | chr17:75513646 | 0.038 | 0.043 | 0.388 | — |
| chr17_75468578_G_T | chr17:75468578 | -0.193 | -0.155 | -0.382 | — |
| chr17_75515742_A_T | chr17:75515742 | -0.216 | -0.140 | -0.094 | — |
| chr17_75515757_C_T | chr17:75515757 | -0.216 | -0.082 | -0.024 | — |
| chr17_75513644_C_G | chr17:75513644 | 0.027 | 0.041 | 0.376 | — |
| chr17_75468585_A_T | chr17:75468585 | -0.173 | -0.184 | -0.371 | — |
| chr17_75468598_G_T | chr17:75468598 | -0.210 | -0.138 | -0.282 | — |
| chr17_75468601_A_T | chr17:75468601 | -0.208 | -0.179 | -0.265 | — |
| chr17_75515755_G_C | chr17:75515755 | -0.206 | -0.051 | 0.012 | — |
| chr17_75515740_T_C | chr17:75515740 | -0.203 | -0.179 | -0.106 | — |
| chr17_75515764_C_G | chr17:75515764 | -0.203 | -0.067 | 0.024 | — |
| chr17_75468582_G_A | chr17:75468582 | -0.145 | -0.151 | -0.353 | <0.001% |
| chr17_75468582_G_C | chr17:75468582 | -0.171 | -0.171 | -0.353 | 0.0039% |
| chr17_75468633_C_T | chr17:75468633 | 0.200 | 0.178 | 0.306 | 0.0033% |
| chr17_75515755_G_T | chr17:75515755 | -0.200 | -0.061 | -0.024 | — |
| chr17_75468597_G_T | chr17:75468597 | -0.198 | -0.129 | -0.129 | — |
| chr17_75468600_C_A | chr17:75468600 | -0.198 | -0.132 | -0.241 | — |
| chr17_75513637_C_A | chr17:75513637 | 0.039 | 0.061 | 0.347 | — |
| chr17_75513640_C_T | chr17:75513640 | 0.013 | 0.056 | 0.347 | — |
| chr17_75513644_C_T | chr17:75513644 | 0.017 | 0.044 | 0.347 | 0.0026% |
| chr17_75513645_A_C | chr17:75513645 | -0.078 | -0.033 | -0.347 | — |
| chr17_75513646_C_A | chr17:75513646 | 0.037 | 0.047 | 0.341 | — |
| chr17_75515756_A_G | chr17:75515756 | -0.193 | -0.102 | -0.129 | — |
| chr17_75468597_G_A | chr17:75468597 | -0.190 | -0.124 | -0.206 | — |
| chr17_75468677_T_A | chr17:75468677 | -0.156 | -0.124 | -0.335 | — |
| chr17_75515753_T_A | chr17:75515753 | -0.190 | -0.093 | -0.059 | — |
| chr17_75468600_C_G | chr17:75468600 | -0.186 | -0.135 | -0.218 | — |
| chr17_75468608_G_T | chr17:75468608 | -0.160 | -0.124 | -0.329 | — |
| chr17_75513638_C_T | chr17:75513638 | 0.025 | 0.065 | 0.329 | — |
| chr17_75513640_C_A | chr17:75513640 | 0.025 | 0.046 | 0.329 | — |
| chr17_75513638_C_A | chr17:75513638 | 0.065 | 0.062 | 0.324 | — |
| chr17_75513646_C_T | chr17:75513646 | 0.042 | 0.051 | 0.324 | — |
| chr17_75515738_G_C | chr17:75515738 | -0.183 | -0.096 | 0.200 | — |
| chr17_75468578_G_C | chr17:75468578 | -0.181 | -0.127 | -0.318 | — |
| chr17_75468669_A_T | chr17:75468669 | 0.160 | 0.109 | 0.318 | — |
| chr17_75513644_C_A | chr17:75513644 | 0.020 | 0.041 | 0.318 | — |
| chr17_75515736_G_C | chr17:75515736 | -0.017 | -0.011 | 0.318 | <0.001% |
| chr17_75515739_G_A | chr17:75515739 | -0.180 | -0.090 | 0.035 | — |
| chr17_75515759_T_C | chr17:75515759 | -0.180 | -0.079 | 0.000 | — |
| chr17_75468633_C_A | chr17:75468633 | 0.178 | 0.165 | 0.294 | — |
| chr17_75513647_C_A | chr17:75513647 | 0.075 | 0.065 | 0.312 | — |
| chr17_75515764_C_T | chr17:75515764 | -0.176 | -0.076 | -0.129 | — |
| chr17_75515759_T_A | chr17:75515759 | -0.173 | -0.075 | -0.035 | — |
| chr17_75468594_C_G | chr17:75468594 | -0.171 | -0.132 | -0.247 | — |
| chr17_75468592_T_C | chr17:75468592 | -0.153 | -0.136 | -0.300 | — |
| chr17_75513636_C_G | chr17:75513636 | 0.022 | 0.039 | 0.300 | — |
| chr17_75515756_A_C | chr17:75515756 | -0.093 | 0.008 | 0.294 | — |
| chr17_75513647_C_T | chr17:75513647 | 0.055 | 0.048 | 0.288 | — |
| chr17_75513648_C_G | chr17:75513648 | 0.042 | 0.037 | 0.288 | — |
| chr17_75515742_A_C | chr17:75515742 | -0.163 | -0.100 | 0.094 | — |
| chr17_75515759_T_G | chr17:75515759 | -0.163 | -0.091 | 0.000 | <0.001% |
| chr17_75515761_G_C | chr17:75515761 | -0.163 | -0.086 | -0.024 | — |
| chr17_75468583_T_G | chr17:75468583 | -0.161 | -0.145 | -0.259 | — |
| chr17_75515739_G_C | chr17:75515739 | -0.160 | -0.089 | 0.212 | — |
| chr17_75515743_C_T | chr17:75515743 | -0.156 | -0.108 | -0.282 | — |
| chr17_75515762_A_G | chr17:75515762 | 0.013 | 0.029 | 0.282 | — |
| chr17_75513636_C_T | chr17:75513636 | 0.030 | 0.042 | 0.271 | — |
| chr17_75515739_G_T | chr17:75515739 | 0.000 | 0.041 | 0.271 | — |
| chr17_75468586_C_A | chr17:75468586 | -0.093 | -0.117 | -0.265 | — |
| chr17_75468607_A_T | chr17:75468607 | 0.136 | 0.166 | 0.265 | — |
| chr17_75468633_C_G | chr17:75468633 | 0.150 | 0.137 | 0.235 | — |
| chr17_75513648_C_A | chr17:75513648 | 0.035 | 0.039 | 0.265 | 0.0013% |
| chr17_75513649_A_C | chr17:75513649 | -0.033 | -0.052 | -0.265 | <0.001% |
| chr17_75468599_C_T | chr17:75468599 | 0.146 | 0.231 | 0.229 | — |
| chr17_75468613_A_T | chr17:75468613 | -0.146 | -0.137 | -0.247 | — |
| chr17_75468621_T_G | chr17:75468621 | 0.128 | 0.104 | 0.259 | — |
| chr17_75468634_G_T | chr17:75468634 | 0.146 | 0.117 | 0.247 | — |
| chr17_75468599_C_G | chr17:75468599 | -0.145 | -0.069 | -0.129 | — |
| chr17_75468634_G_C | chr17:75468634 | 0.106 | 0.104 | 0.253 | — |
| chr17_75513614_T_C | chr17:75513614 | -0.027 | -0.052 | -0.253 | — |
| chr17_75515771_C_A | chr17:75515771 | -0.143 | -0.041 | -0.129 | — |
| chr17_75468596_A_C | chr17:75468596 | -0.140 | -0.118 | -0.247 | — |
| chr17_75468632_T_G | chr17:75468632 | 0.123 | 0.119 | 0.247 | — |
| chr17_75513532_A_C | chr17:75513532 | 0.027 | -0.023 | -0.247 | — |
| chr17_75513636_C_A | chr17:75513636 | 0.033 | 0.038 | 0.247 | <0.001% |
| chr17_75515749_G_T | chr17:75515749 | 0.067 | 0.056 | 0.247 | — |
| chr17_75515758_T_G | chr17:75515758 | -0.140 | -0.058 | 0.118 | — |
| chr17_75515765_C_A | chr17:75515765 | -0.140 | -0.030 | -0.012 | — |
| chr17_75468596_A_T | chr17:75468596 | -0.138 | -0.103 | -0.194 | — |
| chr17_75468582_G_T | chr17:75468582 | -0.105 | -0.123 | -0.241 | — |
| chr17_75468606_C_A | chr17:75468606 | -0.126 | -0.095 | -0.241 | — |
| chr17_75515762_A_T | chr17:75515762 | -0.136 | -0.037 | 0.024 | — |
| chr17_75468594_C_T | chr17:75468594 | -0.135 | -0.099 | -0.218 | — |
| chr17_75468600_C_T | chr17:75468600 | -0.133 | -0.108 | -0.200 | — |
| chr17_75468635_A_T | chr17:75468635 | 0.133 | 0.102 | 0.229 | — |
| chr17_75513604_T_C | chr17:75513604 | -0.047 | -0.055 | -0.235 | — |
| chr17_75513609_C_A | chr17:75513609 | 0.042 | 0.057 | 0.235 | — |
| chr17_75513609_C_G | chr17:75513609 | 0.032 | 0.042 | 0.235 | — |
| chr17_75515743_C_G | chr17:75515743 | -0.123 | -0.094 | -0.235 | — |
| chr17_75515751_T_A | chr17:75515751 | 0.133 | 0.076 | 0.176 | — |
| chr17_75468594_C_A | chr17:75468594 | -0.131 | -0.074 | -0.206 | — |
| chr17_75468631_T_G | chr17:75468631 | -0.131 | -0.100 | -0.212 | — |
| chr17_75468574_G_A | chr17:75468574 | -0.110 | -0.109 | -0.229 | — |
| chr17_75468579_A_G | chr17:75468579 | -0.130 | -0.094 | -0.188 | — |
| chr17_75468697_G_T | chr17:75468697 | -0.121 | -0.127 | -0.229 | — |
| chr17_75513531_C_A | chr17:75513531 | 0.008 | -0.019 | -0.229 | — |
| chr17_75515764_C_A | chr17:75515764 | -0.130 | -0.071 | -0.024 | — |
| chr17_75468575_A_G | chr17:75468575 | 0.128 | 0.109 | 0.188 | — |
| chr17_75468595_A_G | chr17:75468595 | -0.128 | -0.103 | -0.129 | — |
| chr17_75468613_A_C | chr17:75468613 | -0.128 | -0.091 | -0.059 | — |
| chr17_75468632_T_A | chr17:75468632 | 0.098 | 0.102 | 0.224 | — |
| chr17_75513609_C_T | chr17:75513609 | 0.033 | 0.048 | 0.224 | — |
| chr17_75515738_G_A | chr17:75515738 | -0.126 | -0.060 | 0.176 | 0.0013% |
| chr17_75468584_C_T | chr17:75468584 | -0.088 | -0.112 | -0.218 | — |
| chr17_75468588_G_C | chr17:75468588 | -0.116 | -0.096 | -0.218 | — |
| chr17_75468706_C_T | chr17:75468706 | 0.098 | 0.107 | 0.218 | — |
| chr17_75515738_G_T | chr17:75515738 | -0.123 | -0.086 | 0.165 | — |
| chr17_75515755_G_A | chr17:75515755 | -0.123 | 0.027 | 0.012 | — |
| chr17_75468621_T_C | chr17:75468621 | -0.121 | -0.086 | -0.124 | — |
| chr17_75468584_C_A | chr17:75468584 | -0.090 | -0.110 | -0.212 | — |
| chr17_75468588_G_T | chr17:75468588 | -0.100 | -0.094 | -0.212 | — |
| chr17_75513532_A_T | chr17:75513532 | 0.018 | -0.008 | -0.212 | — |
| chr17_75513610_C_T | chr17:75513610 | 0.032 | 0.032 | 0.212 | — |
| chr17_75515736_G_T | chr17:75515736 | 0.030 | 0.039 | 0.212 | — |
| chr17_75515763_C_G | chr17:75515763 | -0.120 | -0.063 | -0.047 | — |
| chr17_75468634_G_A | chr17:75468634 | 0.118 | 0.079 | 0.159 | — |
| chr17_75468635_A_G | chr17:75468635 | 0.118 | 0.094 | 0.124 | — |
| chr17_75468586_C_T | chr17:75468586 | -0.075 | -0.109 | -0.206 | — |
| chr17_75468593_G_C | chr17:75468593 | 0.116 | 0.058 | 0.118 | — |
| chr17_75513531_C_G | chr17:75513531 | 0.016 | -0.014 | -0.206 | — |
| chr17_75515735_A_T | chr17:75515735 | -0.116 | -0.051 | 0.129 | — |
| chr17_75515770_G_A | chr17:75515770 | -0.116 | -0.069 | -0.153 | — |
| chr17_75515770_G_C | chr17:75515770 | 0.116 | 0.029 | 0.153 | — |
| chr17_75468604_T_G | chr17:75468604 | 0.113 | 0.096 | 0.200 | — |
| chr17_75468679_G_A | chr17:75468679 | 0.072 | 0.084 | 0.200 | — |
| chr17_75468705_G_A | chr17:75468705 | -0.072 | -0.066 | -0.200 | — |
| chr17_75513610_C_G | chr17:75513610 | 0.045 | 0.043 | 0.200 | — |
| chr17_75513639_A_T | chr17:75513639 | 0.101 | 0.019 | 0.200 | — |
| chr17_75513648_C_T | chr17:75513648 | 0.028 | 0.042 | 0.200 | — |
| chr17_75515751_T_G | chr17:75515751 | 0.113 | 0.055 | 0.176 | — |
| chr17_75515763_C_T | chr17:75515763 | -0.106 | -0.062 | -0.200 | — |
| chr17_75468635_A_C | chr17:75468635 | 0.111 | 0.061 | 0.194 | — |
| chr17_75468585_A_C | chr17:75468585 | -0.100 | -0.102 | -0.194 | — |
| chr17_75468591_T_G | chr17:75468591 | 0.110 | 0.088 | 0.112 | — |
| chr17_75468638_C_A | chr17:75468638 | -0.092 | -0.071 | -0.194 | — |
| chr17_75513529_G_T | chr17:75513529 | 0.031 | -0.011 | -0.194 | <0.001% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.