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LOC105374338
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near LOC105374338
chr4:477,167..684,866, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr4_499207_G_C | chr4:499207 | 0.710 | 0.254 | 0.482 | — |
| chr4_499244_C_A | chr4:499244 | 0.600 | 0.081 | 0.318 | — |
| chr4_499305_T_G | chr4:499305 | 0.577 | 0.289 | 0.188 | — |
| chr4_499172_G_T | chr4:499172 | 0.571 | 0.056 | -0.271 | — |
| chr4_499206_C_A | chr4:499206 | 0.569 | 0.020 | 0.165 | — |
| chr4_499205_A_C | chr4:499205 | 0.566 | 0.018 | 0.176 | — |
| chr4_499206_C_G | chr4:499206 | 0.566 | 0.122 | 0.365 | — |
| chr4_499202_G_T | chr4:499202 | 0.531 | 0.063 | 0.000 | — |
| chr4_499115_A_C | chr4:499115 | -0.529 | -0.183 | -0.294 | — |
| chr4_499252_C_G | chr4:499252 | -0.487 | -0.140 | -0.071 | — |
| chr4_499174_G_C | chr4:499174 | 0.464 | 0.157 | 0.659 | — |
| chr4_499207_G_A | chr4:499207 | 0.464 | 0.074 | 0.435 | — |
| chr4_499199_G_C | chr4:499199 | 0.153 | -0.109 | 0.812 | — |
| chr4_499202_G_C | chr4:499202 | 0.454 | 0.041 | 0.106 | — |
| chr4_499303_G_C | chr4:499303 | 0.453 | 0.162 | 0.424 | — |
| chr4_499173_T_G | chr4:499173 | 0.449 | 0.129 | -0.082 | — |
| chr4_499174_G_A | chr4:499174 | 0.446 | 0.041 | -0.024 | <0.001% |
| chr4_499200_A_G | chr4:499200 | 0.438 | -0.063 | 0.082 | — |
| chr4_499176_C_A | chr4:499176 | 0.431 | 0.038 | -0.012 | — |
| chr4_499207_G_T | chr4:499207 | 0.431 | 0.063 | 0.353 | — |
| chr4_499168_G_T | chr4:499168 | 0.416 | 0.157 | -0.047 | — |
| chr4_499269_A_C | chr4:499269 | -0.125 | -0.409 | -0.729 | — |
| chr4_499203_T_A | chr4:499203 | 0.409 | -0.112 | -0.141 | <0.001% |
| chr4_499293_C_G | chr4:499293 | -0.408 | -0.033 | 0.059 | — |
| chr4_499266_C_G | chr4:499266 | -0.230 | -0.320 | -0.718 | — |
| chr4_499269_A_T | chr4:499269 | -0.166 | -0.388 | -0.718 | — |
| chr4_499298_G_C | chr4:499298 | -0.039 | 0.033 | 0.718 | — |
| chr4_499203_T_C | chr4:499203 | 0.404 | -0.109 | -0.094 | — |
| chr4_499269_A_G | chr4:499269 | -0.161 | -0.398 | -0.706 | — |
| chr4_499319_A_G | chr4:499319 | 0.399 | 0.360 | 0.588 | — |
| chr4_499204_G_T | chr4:499204 | 0.396 | 0.081 | 0.000 | — |
| chr4_499203_T_G | chr4:499203 | 0.394 | -0.129 | -0.188 | — |
| chr4_499147_G_C | chr4:499147 | 0.166 | 0.343 | 0.682 | — |
| chr4_499205_A_T | chr4:499205 | 0.386 | 0.117 | 0.341 | — |
| chr4_499172_G_C | chr4:499172 | 0.379 | -0.063 | -0.388 | — |
| chr4_499267_G_C | chr4:499267 | -0.229 | -0.429 | -0.671 | — |
| chr4_499173_T_A | chr4:499173 | 0.373 | 0.020 | -0.294 | — |
| chr4_499204_G_A | chr4:499204 | 0.371 | 0.013 | -0.024 | — |
| chr4_499169_G_A | chr4:499169 | 0.364 | 0.165 | -0.188 | — |
| chr4_499303_G_T | chr4:499303 | 0.364 | 0.091 | 0.176 | — |
| chr4_499169_G_C | chr4:499169 | 0.363 | 0.084 | -0.212 | — |
| chr4_499199_G_A | chr4:499199 | 0.359 | 0.053 | 0.212 | — |
| chr4_499267_G_T | chr4:499267 | -0.221 | -0.378 | -0.635 | — |
| chr4_499290_A_G | chr4:499290 | 0.358 | 0.140 | 0.000 | — |
| chr4_499342_C_G | chr4:499342 | -0.356 | -0.086 | -0.047 | — |
| chr4_499266_C_T | chr4:499266 | -0.193 | -0.340 | -0.624 | 0.0046% |
| chr4_499271_G_T | chr4:499271 | -0.191 | -0.332 | -0.624 | — |
| chr4_499176_C_G | chr4:499176 | 0.346 | 0.145 | 0.212 | — |
| chr4_499170_A_T | chr4:499170 | 0.344 | -0.051 | -0.435 | — |
| chr4_499175_A_T | chr4:499175 | 0.339 | -0.010 | -0.094 | — |
| chr4_499267_G_A | chr4:499267 | -0.199 | -0.393 | -0.600 | — |
| chr4_499171_A_G | chr4:499171 | 0.338 | 0.157 | -0.035 | — |
| chr4_499170_A_C | chr4:499170 | 0.334 | 0.069 | -0.376 | — |
| chr4_499135_G_C | chr4:499135 | -0.192 | -0.231 | -0.588 | — |
| chr4_499169_G_T | chr4:499169 | 0.333 | 0.076 | -0.294 | — |
| chr4_499290_A_T | chr4:499290 | 0.329 | 0.069 | 0.118 | — |
| chr4_499168_G_A | chr4:499168 | 0.328 | 0.203 | -0.012 | — |
| chr4_499303_G_A | chr4:499303 | 0.315 | 0.061 | 0.106 | — |
| chr4_499206_C_T | chr4:499206 | 0.306 | 0.127 | 0.365 | — |
| chr4_499268_G_A | chr4:499268 | -0.150 | -0.292 | -0.541 | — |
| chr4_499270_A_G | chr4:499270 | -0.029 | -0.411 | -0.541 | 0.0059% |
| chr4_499177_G_C | chr4:499177 | 0.304 | 0.079 | 0.071 | — |
| chr4_499270_A_C | chr4:499270 | -0.102 | -0.348 | -0.529 | — |
| chr4_499168_G_C | chr4:499168 | 0.298 | 0.195 | -0.082 | — |
| chr4_499170_A_G | chr4:499170 | 0.298 | 0.094 | -0.365 | — |
| chr4_499177_G_T | chr4:499177 | 0.296 | 0.112 | 0.235 | — |
| chr4_499174_G_T | chr4:499174 | 0.293 | 0.038 | -0.071 | — |
| chr4_499268_G_T | chr4:499268 | -0.072 | -0.299 | -0.518 | — |
| chr4_499299_G_C | chr4:499299 | 0.291 | 0.076 | 0.388 | — |
| chr4_499067_C_G | chr4:499067 | -0.285 | -0.051 | -0.106 | — |
| chr4_499300_T_C | chr4:499300 | 0.279 | 0.104 | 0.318 | <0.001% |
| chr4_499167_C_G | chr4:499167 | 0.275 | 0.071 | -0.094 | — |
| chr4_499167_C_T | chr4:499167 | 0.275 | 0.071 | -0.224 | <0.001% |
| chr4_499268_G_C | chr4:499268 | -0.061 | -0.320 | -0.482 | — |
| chr4_499123_C_A | chr4:499123 | 0.264 | 0.165 | 0.471 | 0.017% |
| chr4_499132_T_A | chr4:499132 | -0.265 | -0.140 | -0.435 | — |
| chr4_499317_C_T | chr4:499317 | 0.261 | 0.173 | 0.282 | — |
| chr4_499265_C_T | chr4:499265 | -0.210 | -0.266 | -0.459 | — |
| chr4_498928_G_A | chr4:498928 | 0.057 | 0.051 | 0.447 | 0.023% |
| chr4_498934_C_G | chr4:498934 | 0.078 | 0.018 | 0.435 | <0.001% |
| chr4_499271_G_C | chr4:499271 | -0.125 | -0.274 | -0.435 | — |
| chr4_499135_G_T | chr4:499135 | -0.245 | -0.056 | -0.259 | — |
| chr4_499258_C_T | chr4:499258 | 0.245 | 0.046 | 0.329 | — |
| chr4_499264_G_A | chr4:499264 | 0.244 | 0.175 | 0.329 | <0.001% |
| chr4_499133_A_T | chr4:499133 | -0.211 | -0.135 | -0.424 | 0.0026% |
| chr4_499175_A_C | chr4:499175 | 0.236 | -0.074 | -0.247 | — |
| chr4_499306_C_T | chr4:499306 | 0.236 | 0.119 | 0.059 | <0.001% |
| chr4_499178_C_G | chr4:499178 | 0.235 | 0.043 | 0.071 | — |
| chr4_499205_A_G | chr4:499205 | 0.235 | 0.081 | 0.353 | — |
| chr4_498912_G_C | chr4:498912 | 0.101 | 0.025 | 0.412 | <0.001% |
| chr4_499133_A_C | chr4:499133 | -0.215 | -0.147 | -0.412 | 0.0020% |
| chr4_499291_G_T | chr4:499291 | -0.152 | -0.147 | -0.412 | — |
| chr4_499308_G_C | chr4:499308 | 0.201 | 0.297 | 0.412 | — |
| chr4_499173_T_C | chr4:499173 | 0.230 | -0.015 | -0.306 | — |
| chr4_499122_C_A | chr4:499122 | 0.019 | -0.003 | 0.400 | — |
| chr4_499294_T_G | chr4:499294 | 0.226 | 0.178 | 0.176 | — |
| chr4_499223_C_A | chr4:499223 | 0.225 | 0.005 | 0.176 | — |
| chr4_499227_A_G | chr4:499227 | -0.223 | -0.091 | -0.129 | — |
| chr4_499301_G_C | chr4:499301 | 0.223 | 0.107 | 0.176 | — |
| chr4_499324_A_C | chr4:499324 | -0.223 | -0.051 | 0.071 | — |
| chr4_498807_C_T | chr4:498807 | 0.032 | 0.173 | 0.388 | <0.001% |
| chr4_499265_C_A | chr4:499265 | -0.136 | -0.162 | -0.388 | — |
| chr4_499307_G_A | chr4:499307 | 0.220 | 0.266 | 0.259 | — |
| chr4_499204_G_C | chr4:499204 | 0.218 | -0.030 | -0.224 | — |
| chr4_499176_C_T | chr4:499176 | 0.215 | 0.114 | 0.106 | — |
| chr4_498937_G_C | chr4:498937 | 0.034 | 0.023 | 0.376 | <0.001% |
| chr4_499270_A_T | chr4:499270 | -0.057 | -0.277 | -0.376 | — |
| chr4_499098_G_A | chr4:499098 | -0.209 | -0.061 | -0.129 | — |
| chr4_499191_C_T | chr4:499191 | 0.133 | 0.135 | 0.365 | — |
| chr4_499240_A_G | chr4:499240 | -0.128 | -0.160 | -0.365 | — |
| chr4_499239_T_C | chr4:499239 | -0.205 | -0.043 | -0.012 | — |
| chr4_499301_G_T | chr4:499301 | 0.203 | 0.119 | 0.118 | — |
| chr4_499130_C_G | chr4:499130 | 0.202 | -0.061 | 0.106 | <0.001% |
| chr4_499149_C_G | chr4:499149 | -0.201 | -0.058 | -0.059 | — |
| chr4_499145_A_C | chr4:499145 | -0.181 | -0.170 | -0.353 | — |
| chr4_499297_A_G | chr4:499297 | 0.078 | -0.018 | 0.353 | <0.001% |
| chr4_499315_A_C | chr4:499315 | 0.196 | 0.188 | 0.353 | — |
| chr4_499142_G_T | chr4:499142 | -0.194 | -0.028 | -0.271 | <0.001% |
| chr4_499272_C_T | chr4:499272 | 0.159 | 0.188 | 0.341 | 0.0046% |
| chr4_499150_C_A | chr4:499150 | -0.190 | 0.051 | 0.247 | 0.0020% |
| chr4_499149_C_A | chr4:499149 | -0.189 | 0.079 | 0.271 | — |
| chr4_499178_C_A | chr4:499178 | 0.188 | 0.038 | 0.071 | — |
| chr4_499209_C_T | chr4:499209 | 0.188 | 0.010 | 0.024 | <0.001% |
| chr4_499228_A_G | chr4:499228 | -0.188 | -0.096 | -0.271 | — |
| chr4_499287_G_A | chr4:499287 | -0.187 | -0.091 | -0.165 | <0.001% |
| chr4_498906_A_C | chr4:498906 | 0.094 | 0.015 | 0.329 | <0.001% |
| chr4_499071_G_C | chr4:499071 | -0.186 | -0.025 | -0.106 | — |
| chr4_499251_G_A | chr4:499251 | -0.154 | -0.048 | -0.329 | <0.001% |
| chr4_499347_C_G | chr4:499347 | -0.186 | -0.051 | 0.000 | — |
| chr4_499094_G_A | chr4:499094 | -0.183 | -0.074 | 0.047 | — |
| chr4_498860_G_C | chr4:498860 | 0.060 | 0.023 | 0.324 | <0.001% |
| chr4_499134_T_C | chr4:499134 | -0.183 | -0.066 | -0.165 | <0.001% |
| chr4_499150_C_G | chr4:499150 | -0.183 | 0.013 | 0.000 | — |
| chr4_499208_C_G | chr4:499208 | 0.183 | 0.058 | 0.129 | <0.001% |
| chr4_499285_G_C | chr4:499285 | -0.183 | -0.046 | -0.059 | <0.001% |
| chr4_499148_C_T | chr4:499148 | -0.182 | 0.129 | 0.294 | — |
| chr4_499236_C_G | chr4:499236 | 0.181 | 0.137 | 0.106 | — |
| chr4_498988_T_C | chr4:498988 | 0.030 | 0.025 | 0.318 | 0.0013% |
| chr4_499161_G_T | chr4:499161 | 0.023 | 0.058 | 0.318 | — |
| chr4_499163_C_G | chr4:499163 | 0.073 | 0.155 | 0.318 | — |
| chr4_499190_G_A | chr4:499190 | 0.110 | 0.119 | 0.318 | — |
| chr4_499286_G_A | chr4:499286 | -0.111 | -0.051 | -0.318 | — |
| chr4_499141_G_C | chr4:499141 | -0.178 | -0.063 | -0.224 | — |
| chr4_499171_A_T | chr4:499171 | 0.178 | 0.102 | 0.106 | — |
| chr4_499217_C_A | chr4:499217 | 0.178 | -0.028 | 0.106 | — |
| chr4_499227_A_T | chr4:499227 | -0.178 | -0.043 | -0.247 | — |
| chr4_499075_G_C | chr4:499075 | -0.176 | -0.025 | 0.000 | — |
| chr4_499091_G_T | chr4:499091 | 0.175 | 0.030 | -0.141 | — |
| chr4_499225_A_C | chr4:499225 | -0.175 | -0.076 | -0.247 | — |
| chr4_499242_T_C | chr4:499242 | 0.175 | -0.076 | 0.071 | — |
| chr4_499141_G_A | chr4:499141 | -0.174 | -0.061 | -0.165 | — |
| chr4_498897_T_G | chr4:498897 | 0.071 | 0.030 | 0.306 | <0.001% |
| chr4_498732_T_C | chr4:498732 | -0.004 | 0.023 | 0.300 | 0.0053% |
| chr4_499143_T_A | chr4:499143 | -0.170 | -0.160 | -0.259 | — |
| chr4_499284_A_T | chr4:499284 | 0.170 | 0.033 | -0.012 | — |
| chr4_499287_G_C | chr4:499287 | -0.169 | -0.056 | -0.047 | <0.001% |
| chr4_499256_T_G | chr4:499256 | 0.168 | 0.074 | 0.224 | — |
| chr4_499288_C_A | chr4:499288 | -0.168 | -0.043 | -0.212 | — |
| chr4_499305_T_C | chr4:499305 | 0.168 | -0.010 | 0.035 | — |
| chr4_499286_G_C | chr4:499286 | -0.167 | -0.071 | -0.176 | — |
| chr4_498699_G_T | chr4:498699 | -0.121 | -0.122 | -0.294 | 0.0040% |
| chr4_498702_G_T | chr4:498702 | -0.096 | -0.018 | -0.294 | 0.0020% |
| chr4_498981_C_T | chr4:498981 | 0.057 | 0.051 | 0.294 | <0.001% |
| chr4_499158_G_T | chr4:499158 | 0.041 | 0.122 | 0.294 | — |
| chr4_499160_G_A | chr4:499160 | 0.121 | 0.104 | 0.294 | 0.0033% |
| chr4_499192_G_A | chr4:499192 | 0.002 | 0.079 | 0.294 | — |
| chr4_499245_T_A | chr4:499245 | 0.072 | 0.058 | 0.294 | — |
| chr4_499298_G_T | chr4:499298 | -0.166 | -0.015 | 0.141 | — |
| chr4_499320_G_T | chr4:499320 | -0.087 | -0.089 | -0.294 | — |
| chr4_499098_G_C | chr4:499098 | -0.162 | -0.076 | -0.165 | — |
| chr4_499067_C_T | chr4:499067 | -0.161 | -0.018 | -0.012 | — |
| chr4_499287_G_T | chr4:499287 | -0.161 | -0.079 | -0.106 | — |
| chr4_499299_G_A | chr4:499299 | 0.161 | 0.000 | 0.153 | — |
| chr4_499209_C_A | chr4:499209 | 0.133 | 0.180 | 0.282 | — |
| chr4_499229_G_T | chr4:499229 | -0.160 | -0.058 | -0.188 | — |
| chr4_499321_C_A | chr4:499321 | -0.160 | -0.025 | -0.094 | — |
| chr4_499337_T_G | chr4:499337 | 0.015 | 0.069 | 0.282 | — |
| chr4_499111_G_T | chr4:499111 | 0.158 | 0.099 | 0.118 | — |
| chr4_499306_C_A | chr4:499306 | 0.156 | 0.081 | 0.012 | — |
| chr4_499295_C_G | chr4:499295 | 0.156 | 0.084 | 0.141 | — |
| chr4_499200_A_C | chr4:499200 | 0.155 | -0.137 | -0.200 | — |
| chr4_499116_C_A | chr4:499116 | -0.154 | -0.028 | -0.235 | — |
| chr4_499087_C_G | chr4:499087 | -0.153 | -0.063 | -0.024 | — |
| chr4_498917_G_A | chr4:498917 | 0.047 | 0.020 | 0.271 | <0.001% |
| chr4_498954_G_C | chr4:498954 | -0.007 | -0.015 | 0.271 | <0.001% |
| chr4_498990_C_A | chr4:498990 | 0.088 | 0.041 | 0.271 | <0.001% |
| chr4_499088_C_G | chr4:499088 | -0.153 | -0.033 | 0.000 | — |
| chr4_499140_A_C | chr4:499140 | -0.092 | -0.119 | -0.271 | — |
| chr4_499160_G_C | chr4:499160 | 0.153 | -0.008 | 0.153 | <0.001% |
| chr4_499164_T_A | chr4:499164 | -0.005 | 0.069 | 0.271 | — |
| chr4_499257_A_T | chr4:499257 | 0.057 | 0.094 | 0.271 | — |
| chr4_499274_C_T | chr4:499274 | -0.040 | 0.018 | 0.271 | — |
| chr4_499285_G_A | chr4:499285 | -0.153 | -0.003 | -0.118 | — |
| chr4_499177_G_A | chr4:499177 | 0.151 | 0.086 | 0.141 | — |
| chr4_499325_G_A | chr4:499325 | -0.151 | -0.010 | -0.106 | — |
| chr4_498689_A_G | chr4:498689 | 0.148 | 0.063 | 0.265 | 0.0013% |
| chr4_499054_A_C | chr4:499054 | -0.150 | -0.091 | -0.059 | — |
| chr4_499232_C_G | chr4:499232 | -0.150 | -0.119 | -0.153 | — |
| chr4_499302_G_C | chr4:499302 | 0.150 | -0.086 | -0.094 | — |
| chr4_499086_G_C | chr4:499086 | -0.149 | -0.020 | -0.129 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.