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LOC728613

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near LOC728613

chr5:1,497,556..1,734,005, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr5_1524130_G_T	chr5:1524130	0.180	0.218	1.000	—
chr5_1516331_A_C	chr5:1516331	-0.483	-0.312	-1.000	0.0033%
chr5_1524114_G_A	chr5:1524114	0.166	0.200	1.000	<0.001%
chr5_1524108_G_A	chr5:1524108	0.193	0.202	1.000	0.069%
chr5_1524132_G_T	chr5:1524132	0.156	0.185	1.000	—
chr5_1524130_G_A	chr5:1524130	0.301	0.216	1.000	—
chr5_1524132_G_A	chr5:1524132	0.195	0.187	1.000	—
chr5_1524131_G_T	chr5:1524131	0.290	0.230	1.000	0.011%
chr5_1524131_G_A	chr5:1524131	0.175	0.195	1.000	—
chr5_1524130_G_C	chr5:1524130	0.300	0.201	1.000	—
chr5_1524131_G_C	chr5:1524131	0.208	0.197	1.000	—
chr5_1524129_G_T	chr5:1524129	0.188	0.188	1.000	—
chr5_1524129_G_C	chr5:1524129	0.140	0.168	1.000	—
chr5_1524132_G_C	chr5:1524132	0.173	0.155	1.000	—
chr5_1502272_C_A	chr5:1502272	-0.391	-0.212	-1.000	<0.001%
chr5_1524129_G_A	chr5:1524129	0.143	0.159	1.000	—
chr5_1524125_G_T	chr5:1524125	0.093	0.157	0.988	—
chr5_1502228_T_C	chr5:1502228	-0.276	-0.275	-0.953	<0.001%
chr5_1502272_C_T	chr5:1502272	-0.443	-0.283	-0.935	0.015%
chr5_1524125_G_C	chr5:1524125	0.120	0.151	0.912	—
chr5_1524125_G_A	chr5:1524125	0.080	0.139	0.871	—
chr5_1524126_A_G	chr5:1524126	-0.083	-0.123	-0.800	—
chr5_1502264_C_T	chr5:1502264	0.206	0.222	0.782	0.0013%
chr5_1524199_C_A	chr5:1524199	0.155	0.220	0.779	—
chr5_1502259_C_A	chr5:1502259	-0.433	-0.244	-0.700	0.0059%
chr5_1524193_G_T	chr5:1524193	0.298	0.235	0.762	—
chr5_1502265_C_T	chr5:1502265	0.195	0.140	0.741	0.0020%
chr5_1524052_C_A	chr5:1524052	-0.140	0.093	0.738	0.0092%
chr5_1502260_C_T	chr5:1502260	-0.416	-0.223	-0.582	<0.001%
chr5_1524128_C_G	chr5:1524128	-0.116	-0.100	-0.726	—
chr5_1524133_G_T	chr5:1524133	0.010	0.097	0.722	—
chr5_1524196_G_T	chr5:1524196	0.161	0.209	0.709	—
chr5_1516341_C_G	chr5:1516341	0.332	0.042	0.659	0.0020%
chr5_1502266_C_A	chr5:1502266	0.180	0.154	0.641	0.0059%
chr5_1502266_C_G	chr5:1502266	0.160	0.133	0.629	41.2%
chr5_1524098_G_C	chr5:1524098	0.226	0.149	0.606	<0.001%
chr5_1502151_C_A	chr5:1502151	0.336	0.216	0.494	0.0020%
chr5_1502243_G_A	chr5:1502243	0.203	0.072	0.594	0.0053%
chr5_1524133_G_A	chr5:1524133	0.028	0.061	0.563	—
chr5_1502242_C_T	chr5:1502242	-0.248	-0.112	-0.559	0.014%
chr5_1524000_G_A	chr5:1524000	-0.040	0.064	0.537	0.0013%
chr5_1502195_C_A	chr5:1502195	0.303	0.173	0.471	<0.001%
chr5_1524133_G_C	chr5:1524133	0.053	0.059	0.526	—
chr5_1502203_C_T	chr5:1502203	-0.290	-0.108	-0.441	0.016%
chr5_1522488_C_T	chr5:1522488	0.266	0.148	0.506	<0.001%
chr5_1524135_G_C	chr5:1524135	0.037	0.076	0.491	—
chr5_1516430_A_G	chr5:1516430	-0.265	-0.184	-0.488	0.0026%
chr5_1502194_C_T	chr5:1502194	0.271	0.324	0.453	<0.001%
chr5_1502286_C_A	chr5:1502286	0.156	0.109	0.476	<0.001%
chr5_1511849_C_T	chr5:1511849	-0.166	-0.193	-0.465	<0.001%
chr5_1524197_T_A	chr5:1524197	-0.255	-0.117	-0.376	—
chr5_1502270_G_A	chr5:1502270	-0.165	-0.080	-0.447	<0.001%
chr5_1516332_C_T	chr5:1516332	0.253	0.121	0.418	0.0020%
chr5_1524207_C_A	chr5:1524207	0.045	0.036	0.447	—
chr5_1524198_C_T	chr5:1524198	0.013	0.065	0.441	—
chr5_1524126_A_T	chr5:1524126	-0.063	-0.064	-0.440	—
chr5_1502277_C_G	chr5:1502277	0.043	0.032	0.435	0.0059%
chr5_1502240_G_C	chr5:1502240	-0.195	-0.155	-0.429	<0.001%
chr5_1502313_G_A	chr5:1502313	-0.193	-0.137	-0.429	<0.001%
chr5_1516390_A_G	chr5:1516390	0.176	0.062	0.429	0.0026%
chr5_1524205_G_T	chr5:1524205	0.078	0.079	0.429	0.0072%
chr5_1502193_G_C	chr5:1502193	-0.241	-0.145	-0.400	<0.001%
chr5_1523850_C_T	chr5:1523850	0.106	0.036	0.419	<0.001%
chr5_1524174_G_C	chr5:1524174	0.220	0.098	0.418	<0.001%
chr5_1524194_A_T	chr5:1524194	-0.136	-0.098	-0.418	—
chr5_1524199_C_G	chr5:1524199	0.037	0.076	0.412	—
chr5_1502155_G_T	chr5:1502155	0.228	0.164	0.324	<0.001%
chr5_1523815_G_A	chr5:1523815	0.109	0.033	0.399	0.039%
chr5_1524016_G_C	chr5:1524016	-0.008	-0.005	-0.397	<0.001%
chr5_1524120_C_T	chr5:1524120	-0.098	-0.080	-0.395	12.1%
chr5_1524134_C_G	chr5:1524134	-0.116	-0.036	-0.393	—
chr5_1502264_C_A	chr5:1502264	-0.221	-0.060	-0.024	0.0013%
chr5_1523813_G_A	chr5:1523813	0.114	0.029	0.391	<0.001%
chr5_1502239_G_A	chr5:1502239	-0.161	-0.136	-0.388	<0.001%
chr5_1523784_C_A	chr5:1523784	0.066	0.031	0.385	0.0047%
chr5_1516336_G_A	chr5:1516336	0.216	0.058	0.253	0.021%
chr5_1516388_A_G	chr5:1516388	0.163	0.145	0.382	0.0013%
chr5_1523917_G_A	chr5:1523917	0.216	0.040	0.310	0.110%
chr5_1502232_C_A	chr5:1502232	-0.205	-0.096	-0.376	<0.001%
chr5_1524194_A_G	chr5:1524194	-0.146	-0.063	-0.376	—
chr5_1523983_T_A	chr5:1523983	0.018	-0.046	-0.376	<0.001%
chr5_1523991_G_A	chr5:1523991	0.052	0.087	0.374	<0.001%
chr5_1523929_G_A	chr5:1523929	0.173	0.024	0.374	<0.001%
chr5_1524195_G_A	chr5:1524195	0.027	0.096	0.374	—
chr5_1524173_G_C	chr5:1524173	0.208	0.085	0.010	—
chr5_1523918_G_A	chr5:1523918	0.206	0.031	0.253	0.0027%
chr5_1524198_C_G	chr5:1524198	0.015	0.057	0.365	—
chr5_1502203_C_G	chr5:1502203	-0.205	-0.063	-0.224	<0.001%
chr5_1523876_G_A	chr5:1523876	0.131	0.030	0.359	0.0014%
chr5_1523861_G_A	chr5:1523861	0.110	0.035	0.357	<0.001%
chr5_1523612_C_T	chr5:1523612	0.089	0.018	0.356	0.0013%
chr5_1523929_G_T	chr5:1523929	0.201	0.048	0.347	<0.001%
chr5_1502291_G_T	chr5:1502291	-0.098	-0.055	-0.353	0.0020%
chr5_1516364_A_G	chr5:1516364	0.199	0.202	0.271	0.0013%
chr5_1524135_G_T	chr5:1524135	0.007	0.043	0.351	—
chr5_1523816_G_A	chr5:1523816	0.074	0.030	0.350	0.0014%
chr5_1524173_G_T	chr5:1524173	0.198	0.105	0.215	—
chr5_1523539_G_A	chr5:1523539	0.037	0.020	0.347	0.0013%
chr5_1524100_T_C	chr5:1524100	0.196	0.060	0.253	0.050%
chr5_1516424_A_G	chr5:1516424	-0.196	-0.132	-0.306	0.0020%
chr5_1524161_G_T	chr5:1524161	0.048	0.125	0.344	—
chr5_1516319_C_G	chr5:1516319	-0.193	-0.103	-0.047	<0.001%
chr5_1522124_A_G	chr5:1522124	-0.101	-0.082	-0.341	0.0046%
chr5_1516475_G_A	chr5:1516475	-0.080	-0.003	-0.335	0.0046%
chr5_1523872_C_A	chr5:1523872	0.083	0.025	0.335	<0.001%
chr5_1523900_C_A	chr5:1523900	0.073	0.026	0.335	<0.001%
chr5_1502048_G_A	chr5:1502048	0.188	0.168	0.135	0.019%
chr5_1523781_G_A	chr5:1523781	0.047	0.026	0.332	<0.001%
chr5_1511851_A_G	chr5:1511851	-0.130	-0.147	-0.329	<0.001%
chr5_1524128_C_T	chr5:1524128	-0.063	-0.050	-0.329	0.0020%
chr5_1524206_C_A	chr5:1524206	0.185	0.078	0.306	—
chr5_1523930_C_T	chr5:1523930	0.108	0.003	0.321	<0.001%
chr5_1524119_G_T	chr5:1524119	0.062	0.047	0.318	0.0013%
chr5_1502261_G_A	chr5:1502261	-0.093	-0.047	-0.318	<0.001%
chr5_1524171_A_T	chr5:1524171	0.180	0.060	0.235	—
chr5_1523771_G_A	chr5:1523771	0.042	0.025	0.316	0.0020%
chr5_1516297_C_G	chr5:1516297	0.177	0.099	0.235	<0.001%
chr5_1523942_G_C	chr5:1523942	0.176	0.083	0.240	<0.001%
chr5_1524197_T_C	chr5:1524197	-0.176	-0.073	-0.276	—
chr5_1524207_C_T	chr5:1524207	0.062	0.042	0.312	0.0013%
chr5_1523853_C_T	chr5:1523853	0.103	0.027	0.310	0.0020%
chr5_1523593_G_T	chr5:1523593	0.022	0.019	0.307	<0.001%
chr5_1524009_C_A	chr5:1524009	0.053	0.040	0.307	<0.001%
chr5_1523915_G_A	chr5:1523915	0.165	0.024	0.306	<0.001%
chr5_1523965_G_A	chr5:1523965	0.082	0.046	0.306	0.0020%
chr5_1524082_C_G	chr5:1524082	-0.035	0.013	0.303	<0.001%
chr5_1516295_T_C	chr5:1516295	0.171	0.109	0.176	0.014%
chr5_1523914_C_A	chr5:1523914	0.168	0.031	0.297	<0.001%
chr5_1524144_A_T	chr5:1524144	0.032	0.037	0.297	—
chr5_1523931_G_T	chr5:1523931	0.166	0.027	0.263	<0.001%
chr5_1523827_G_A	chr5:1523827	0.047	0.027	0.291	0.0034%
chr5_1524141_T_C	chr5:1524141	-0.012	0.011	0.288	—
chr5_1523629_C_T	chr5:1523629	0.072	0.016	0.287	<0.001%
chr5_1523873_C_A	chr5:1523873	0.093	0.021	0.287	<0.001%
chr5_1523792_G_A	chr5:1523792	0.051	0.025	0.285	<0.001%
chr5_1524163_T_C	chr5:1524163	-0.116	-0.039	-0.285	—
chr5_1523946_G_A	chr5:1523946	0.146	0.035	0.284	<0.001%
chr5_1523957_C_T	chr5:1523957	0.050	0.032	0.284	<0.001%
chr5_1502157_A_G	chr5:1502157	-0.146	-0.075	-0.282	0.0072%
chr5_1516371_C_T	chr5:1516371	-0.032	-0.062	-0.282	<0.001%
chr5_1524145_G_C	chr5:1524145	-0.033	0.036	0.279	—
chr5_1523609_C_T	chr5:1523609	0.059	0.025	0.279	<0.001%
chr5_1516334_T_A	chr5:1516334	0.103	0.067	0.276	0.011%
chr5_1524175_T_C	chr5:1524175	0.156	0.067	0.168	—
chr5_1523600_C_T	chr5:1523600	0.029	0.022	0.275	0.0020%
chr5_1524196_G_A	chr5:1524196	-0.018	0.067	0.274	0.018%
chr5_1502333_G_A	chr5:1502333	0.101	0.089	0.271	<0.001%
chr5_1522204_A_G	chr5:1522204	-0.029	-0.023	-0.271	<0.001%
chr5_1524176_C_A	chr5:1524176	0.015	0.058	0.271	—
chr5_1524195_G_C	chr5:1524195	0.025	0.066	0.271	—
chr5_1523979_G_A	chr5:1523979	0.012	0.029	0.269	<0.001%
chr5_1524126_A_C	chr5:1524126	0.088	0.054	0.269	—
chr5_1524144_A_C	chr5:1524144	0.027	0.028	0.268	—
chr5_1524173_G_A	chr5:1524173	0.151	0.084	0.153	—
chr5_1523536_C_T	chr5:1523536	0.014	0.017	0.266	<0.001%
chr5_1524164_C_G	chr5:1524164	-0.083	-0.062	-0.266	—
chr5_1523927_G_A	chr5:1523927	0.135	0.028	0.265	<0.001%
chr5_1524204_G_T	chr5:1524204	-0.072	0.032	0.265	—
chr5_1524208_C_A	chr5:1524208	0.028	0.032	0.265	<0.001%
chr5_1524210_C_T	chr5:1524210	0.048	0.027	0.265	0.0059%
chr5_1523905_C_A	chr5:1523905	0.087	0.024	0.262	0.0061%
chr5_1522167_C_T	chr5:1522167	0.032	0.037	-0.259	<0.001%
chr5_1522168_G_T	chr5:1522168	0.085	0.104	-0.259	<0.001%
chr5_1523903_G_A	chr5:1523903	0.146	0.020	0.184	0.126%
chr5_1524144_A_G	chr5:1524144	0.040	0.043	0.259	—
chr5_1523630_C_T	chr5:1523630	0.068	0.015	0.257	<0.001%
chr5_1523944_G_C	chr5:1523944	0.145	0.036	0.178	0.0013%
chr5_1524174_G_A	chr5:1524174	0.145	0.049	0.226	—
chr5_1523641_G_T	chr5:1523641	0.025	0.017	0.254	<0.001%
chr5_1524162_A_G	chr5:1524162	-0.060	-0.029	-0.254	<0.001%
chr5_1502204_G_A	chr5:1502204	-0.143	-0.022	-0.188	0.0026%
chr5_1502319_G_A	chr5:1502319	-0.103	-0.061	-0.253	<0.001%
chr5_1516080_G_A	chr5:1516080	-0.143	-0.137	-0.188	0.0039%
chr5_1523560_G_A	chr5:1523560	0.052	0.023	0.253	<0.001%
chr5_1524191_G_T	chr5:1524191	-0.033	-0.072	-0.253	—
chr5_1524171_A_G	chr5:1524171	-0.018	-0.034	-0.250	—
chr5_1524187_G_C	chr5:1524187	0.007	-0.020	-0.250	—
chr5_1524200_C_T	chr5:1524200	-0.027	0.027	0.250	—
chr5_1524105_G_C	chr5:1524105	0.072	0.022	0.249	0.0026%
chr5_1523542_G_A	chr5:1523542	0.027	0.015	0.247	<0.001%
chr5_1524201_C_T	chr5:1524201	0.083	0.037	0.247	—
chr5_1524076_C_T	chr5:1524076	0.072	-0.026	-0.244	<0.001%
chr5_1523576_G_A	chr5:1523576	0.031	0.014	0.243	<0.001%
chr5_1516434_G_A	chr5:1516434	0.110	0.091	0.241	<0.001%
chr5_1523674_C_A	chr5:1523674	0.035	0.016	0.241	<0.001%
chr5_1523675_G_A	chr5:1523675	0.019	0.017	0.241	<0.001%
chr5_1523880_C_T	chr5:1523880	0.057	0.023	0.241	0.0014%
chr5_1523904_G_A	chr5:1523904	0.136	0.022	0.194	0.039%
chr5_1523939_G_A	chr5:1523939	0.098	0.073	0.241	0.0020%
chr5_1524165_C_A	chr5:1524165	0.023	0.047	0.241	<0.001%
chr5_1524176_C_T	chr5:1524176	0.085	0.073	0.241	—
chr5_1524206_C_G	chr5:1524206	0.111	0.047	0.241	—
chr5_1523797_T_C	chr5:1523797	-0.060	-0.020	-0.240	<0.001%
chr5_1523862_G_A	chr5:1523862	0.070	0.020	0.238	<0.001%
chr5_1523912_G_T	chr5:1523912	0.135	0.003	0.047	<0.001%
chr5_1523950_G_T	chr5:1523950	0.077	0.023	0.238	0.0013%
chr5_1523678_G_A	chr5:1523678	0.024	0.020	0.237	<0.001%
chr5_1523782_A_C	chr5:1523782	-0.072	-0.016	-0.237	<0.001%
chr5_1502343_A_C	chr5:1502343	-0.113	-0.067	-0.235	<0.001%
chr5_1522130_T_C	chr5:1522130	0.116	0.263	0.235	<0.001%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.