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LRCOL1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near LRCOL1
chr12:132,503,150..132,710,582, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr12_132524442_T_G | chr12:132524442 | 1.000 | 0.972 | 1.000 | — |
| chr12_132524560_G_C | chr12:132524560 | 0.958 | 0.596 | 1.000 | — |
| chr12_132524553_G_A | chr12:132524553 | 0.770 | 0.599 | 0.912 | — |
| chr12_132524518_G_C | chr12:132524518 | -0.502 | -0.439 | -1.000 | — |
| chr12_132524509_C_T | chr12:132524509 | 0.391 | 0.216 | 1.000 | 1.51% |
| chr12_132524521_A_G | chr12:132524521 | -0.571 | -0.419 | -1.000 | — |
| chr12_132524524_C_G | chr12:132524524 | 0.614 | 0.633 | 0.706 | — |
| chr12_132524518_G_A | chr12:132524518 | -0.501 | -0.400 | -1.000 | — |
| chr12_132524520_C_G | chr12:132524520 | -0.476 | -0.372 | -1.000 | — |
| chr12_132524520_C_T | chr12:132524520 | -0.454 | -0.354 | -1.000 | — |
| chr12_132524500_G_C | chr12:132524500 | 0.584 | 0.492 | 0.753 | <0.001% |
| chr12_132524510_G_C | chr12:132524510 | -0.517 | -0.424 | -1.000 | — |
| chr12_132524510_G_T | chr12:132524510 | -0.511 | -0.407 | -0.994 | — |
| chr12_132524512_C_G | chr12:132524512 | -0.449 | -0.350 | -0.988 | — |
| chr12_132524512_C_T | chr12:132524512 | -0.448 | -0.335 | -0.965 | — |
| chr12_132524480_C_A | chr12:132524480 | 0.541 | 0.490 | 0.682 | — |
| chr12_132524520_C_A | chr12:132524520 | -0.424 | -0.268 | -0.947 | — |
| chr12_132524521_A_C | chr12:132524521 | -0.453 | -0.348 | -0.929 | <0.001% |
| chr12_132524503_G_A | chr12:132524503 | 0.517 | 0.549 | 0.712 | 0.049% |
| chr12_132524499_A_G | chr12:132524499 | 0.512 | 0.546 | 0.753 | — |
| chr12_132524512_C_A | chr12:132524512 | -0.414 | -0.311 | -0.894 | — |
| chr12_132524521_A_T | chr12:132524521 | -0.494 | -0.353 | -0.888 | — |
| chr12_132524544_C_A | chr12:132524544 | 0.499 | 0.355 | 0.571 | — |
| chr12_132524505_A_G | chr12:132524505 | -0.491 | -0.467 | -0.771 | — |
| chr12_132524519_C_A | chr12:132524519 | -0.391 | -0.308 | -0.853 | 0.0013% |
| chr12_132524519_C_T | chr12:132524519 | -0.399 | -0.296 | -0.853 | — |
| chr12_132524508_T_G | chr12:132524508 | -0.458 | -0.390 | -0.847 | — |
| chr12_132524449_C_G | chr12:132524449 | 0.473 | 0.330 | 0.600 | — |
| chr12_132524522_G_T | chr12:132524522 | -0.459 | -0.338 | -0.835 | — |
| chr12_132524508_T_A | chr12:132524508 | -0.448 | -0.362 | -0.818 | 0.0026% |
| chr12_132524519_C_G | chr12:132524519 | -0.384 | -0.283 | -0.812 | — |
| chr12_132524541_C_T | chr12:132524541 | 0.286 | 0.093 | 0.812 | <0.001% |
| chr12_132524522_G_C | chr12:132524522 | -0.456 | -0.330 | -0.794 | — |
| chr12_132524511_G_T | chr12:132524511 | -0.408 | -0.302 | -0.794 | — |
| chr12_132524510_G_A | chr12:132524510 | -0.443 | -0.303 | -0.694 | 0.0026% |
| chr12_132524548_A_C | chr12:132524548 | 0.156 | 0.027 | 0.776 | — |
| chr12_132524505_A_T | chr12:132524505 | -0.434 | -0.400 | -0.641 | — |
| chr12_132524527_A_T | chr12:132524527 | 0.434 | 0.299 | 0.459 | — |
| chr12_132524471_G_A | chr12:132524471 | 0.433 | 0.364 | 0.624 | — |
| chr12_132524511_G_C | chr12:132524511 | -0.381 | -0.273 | -0.741 | — |
| chr12_132524511_G_A | chr12:132524511 | -0.388 | -0.284 | -0.729 | — |
| chr12_132524545_A_G | chr12:132524545 | 0.398 | 0.246 | 0.471 | — |
| chr12_132524567_T_C | chr12:132524567 | -0.356 | -0.307 | -0.682 | — |
| chr12_132524508_T_C | chr12:132524508 | -0.384 | -0.311 | -0.606 | <0.001% |
| chr12_132524505_A_C | chr12:132524505 | -0.373 | -0.344 | -0.529 | — |
| chr12_132524562_C_G | chr12:132524562 | 0.373 | 0.209 | 0.471 | <0.001% |
| chr12_132524488_G_A | chr12:132524488 | 0.366 | 0.310 | 0.459 | — |
| chr12_132524489_C_T | chr12:132524489 | -0.363 | -0.310 | -0.624 | — |
| chr12_132524529_G_T | chr12:132524529 | 0.356 | 0.332 | 0.359 | — |
| chr12_132524513_A_G | chr12:132524513 | -0.329 | -0.263 | -0.624 | — |
| chr12_132524494_G_T | chr12:132524494 | -0.351 | -0.211 | -0.494 | — |
| chr12_132524518_G_T | chr12:132524518 | -0.258 | -0.232 | -0.594 | — |
| chr12_132524558_G_T | chr12:132524558 | 0.329 | 0.145 | 0.100 | — |
| chr12_132524485_C_G | chr12:132524485 | -0.300 | -0.216 | -0.571 | — |
| chr12_132524504_A_T | chr12:132524504 | -0.318 | -0.280 | -0.441 | — |
| chr12_132524527_A_C | chr12:132524527 | 0.318 | 0.232 | 0.441 | — |
| chr12_132524502_C_G | chr12:132524502 | -0.316 | -0.244 | -0.365 | — |
| chr12_132524494_G_C | chr12:132524494 | -0.314 | -0.190 | -0.388 | — |
| chr12_132524566_T_A | chr12:132524566 | 0.314 | 0.119 | 0.394 | — |
| chr12_132524492_C_A | chr12:132524492 | -0.311 | -0.250 | -0.482 | — |
| chr12_132524538_G_C | chr12:132524538 | 0.311 | 0.195 | 0.412 | — |
| chr12_132524531_C_A | chr12:132524531 | -0.251 | -0.179 | -0.535 | — |
| chr12_132524486_G_T | chr12:132524486 | 0.285 | 0.201 | 0.376 | — |
| chr12_132524559_G_T | chr12:132524559 | 0.240 | 0.232 | 0.500 | — |
| chr12_132524489_C_G | chr12:132524489 | -0.280 | -0.239 | -0.471 | — |
| chr12_132524567_T_A | chr12:132524567 | -0.271 | -0.227 | -0.494 | — |
| chr12_132524560_G_A | chr12:132524560 | 0.278 | 0.203 | 0.400 | — |
| chr12_132524478_C_G | chr12:132524478 | 0.276 | 0.162 | 0.259 | — |
| chr12_132524566_T_G | chr12:132524566 | -0.231 | -0.240 | -0.488 | — |
| chr12_132524506_G_C | chr12:132524506 | -0.275 | -0.240 | -0.435 | — |
| chr12_132524456_A_G | chr12:132524456 | -0.236 | -0.188 | -0.471 | — |
| chr12_132524524_C_T | chr12:132524524 | 0.266 | 0.247 | 0.353 | — |
| chr12_132524556_C_A | chr12:132524556 | 0.261 | 0.226 | 0.429 | — |
| chr12_132524504_A_G | chr12:132524504 | -0.260 | -0.228 | -0.288 | — |
| chr12_132524561_A_C | chr12:132524561 | 0.258 | 0.118 | 0.188 | — |
| chr12_132524526_C_A | chr12:132524526 | -0.256 | -0.171 | -0.288 | — |
| chr12_132524578_G_A | chr12:132524578 | 0.048 | 0.028 | 0.441 | — |
| chr12_132524494_G_A | chr12:132524494 | -0.246 | -0.175 | -0.412 | — |
| chr12_132524506_G_T | chr12:132524506 | -0.246 | -0.185 | -0.241 | — |
| chr12_132524517_A_C | chr12:132524517 | 0.246 | 0.206 | 0.347 | — |
| chr12_132524556_C_T | chr12:132524556 | -0.186 | -0.162 | -0.435 | — |
| chr12_132524562_C_T | chr12:132524562 | -0.245 | -0.207 | -0.341 | <0.001% |
| chr12_132524537_C_G | chr12:132524537 | -0.243 | -0.110 | -0.229 | — |
| chr12_132524502_C_A | chr12:132524502 | -0.240 | -0.198 | -0.294 | — |
| chr12_132524509_C_A | chr12:132524509 | -0.236 | -0.204 | -0.376 | — |
| chr12_132524568_T_G | chr12:132524568 | 0.032 | 0.032 | 0.418 | <0.001% |
| chr12_132524485_C_T | chr12:132524485 | -0.226 | -0.204 | -0.412 | 0.0013% |
| chr12_132524501_C_A | chr12:132524501 | -0.228 | -0.202 | -0.412 | — |
| chr12_132524507_G_A | chr12:132524507 | -0.225 | -0.170 | -0.412 | — |
| chr12_132524513_A_C | chr12:132524513 | -0.193 | -0.185 | -0.412 | — |
| chr12_132524529_G_A | chr12:132524529 | 0.223 | 0.161 | 0.141 | — |
| chr12_132524473_A_G | chr12:132524473 | -0.221 | -0.178 | -0.329 | — |
| chr12_132524540_G_C | chr12:132524540 | -0.218 | -0.133 | -0.282 | — |
| chr12_132524471_G_C | chr12:132524471 | 0.216 | 0.129 | 0.376 | — |
| chr12_132524495_G_T | chr12:132524495 | -0.216 | -0.168 | -0.335 | — |
| chr12_132524499_A_T | chr12:132524499 | 0.216 | 0.244 | 0.353 | — |
| chr12_132524501_C_T | chr12:132524501 | 0.216 | 0.183 | 0.200 | — |
| chr12_132524507_G_C | chr12:132524507 | -0.216 | -0.122 | -0.106 | — |
| chr12_132524543_A_C | chr12:132524543 | -0.215 | -0.150 | -0.382 | — |
| chr12_132524530_G_A | chr12:132524530 | 0.215 | 0.184 | 0.271 | — |
| chr12_132524483_A_G | chr12:132524483 | 0.138 | 0.162 | 0.376 | — |
| chr12_132524525_T_A | chr12:132524525 | 0.213 | 0.162 | 0.271 | — |
| chr12_132524488_G_C | chr12:132524488 | 0.210 | 0.168 | 0.306 | — |
| chr12_132524506_G_A | chr12:132524506 | -0.210 | -0.129 | -0.082 | — |
| chr12_132524477_G_A | chr12:132524477 | 0.205 | 0.154 | 0.188 | — |
| chr12_132524523_G_T | chr12:132524523 | -0.148 | -0.109 | -0.359 | — |
| chr12_132524504_A_C | chr12:132524504 | -0.201 | -0.187 | -0.159 | — |
| chr12_132524517_A_G | chr12:132524517 | -0.201 | -0.114 | -0.318 | — |
| chr12_132524445_G_C | chr12:132524445 | -0.185 | -0.180 | -0.353 | — |
| chr12_132524493_T_C | chr12:132524493 | -0.200 | -0.140 | -0.271 | — |
| chr12_132524536_G_T | chr12:132524536 | -0.165 | -0.117 | -0.353 | — |
| chr12_132524474_G_A | chr12:132524474 | 0.020 | 0.061 | 0.341 | — |
| chr12_132524477_G_T | chr12:132524477 | 0.193 | 0.159 | 0.188 | — |
| chr12_132524490_C_T | chr12:132524490 | -0.193 | -0.157 | -0.282 | — |
| chr12_132524493_T_G | chr12:132524493 | -0.191 | -0.165 | -0.271 | — |
| chr12_132524580_G_C | chr12:132524580 | 0.191 | 0.157 | 0.247 | — |
| chr12_132524571_C_A | chr12:132524571 | -0.085 | -0.039 | -0.335 | — |
| chr12_132524490_C_G | chr12:132524490 | -0.188 | -0.135 | -0.212 | — |
| chr12_132524526_C_T | chr12:132524526 | -0.186 | -0.133 | -0.253 | <0.001% |
| chr12_132524490_C_A | chr12:132524490 | -0.185 | -0.148 | -0.247 | — |
| chr12_132524577_T_G | chr12:132524577 | 0.183 | 0.241 | 0.112 | — |
| chr12_132524492_C_G | chr12:132524492 | -0.180 | -0.154 | -0.165 | — |
| chr12_132524493_T_A | chr12:132524493 | -0.180 | -0.146 | -0.235 | — |
| chr12_132524448_A_C | chr12:132524448 | -0.176 | -0.137 | -0.306 | — |
| chr12_132524487_G_T | chr12:132524487 | 0.176 | 0.146 | 0.306 | — |
| chr12_132524513_A_T | chr12:132524513 | -0.141 | -0.122 | -0.312 | — |
| chr12_132524527_A_G | chr12:132524527 | 0.141 | 0.104 | 0.312 | — |
| chr12_132524544_C_G | chr12:132524544 | 0.176 | 0.108 | 0.229 | — |
| chr12_132524457_G_T | chr12:132524457 | -0.161 | -0.168 | -0.306 | — |
| chr12_132524472_G_C | chr12:132524472 | -0.171 | -0.094 | -0.306 | — |
| chr12_132524478_C_T | chr12:132524478 | 0.173 | 0.121 | 0.153 | — |
| chr12_132524498_G_T | chr12:132524498 | -0.173 | -0.148 | -0.235 | — |
| chr12_132524546_C_G | chr12:132524546 | 0.171 | 0.098 | 0.235 | 0.0013% |
| chr12_132524491_T_C | chr12:132524491 | -0.170 | -0.128 | -0.271 | — |
| chr12_132524495_G_C | chr12:132524495 | -0.170 | -0.124 | -0.300 | — |
| chr12_132524552_A_G | chr12:132524552 | -0.133 | -0.096 | -0.300 | <0.001% |
| chr12_132524463_T_A | chr12:132524463 | -0.155 | -0.131 | -0.294 | — |
| chr12_132524473_A_C | chr12:132524473 | 0.130 | 0.104 | 0.294 | — |
| chr12_132524503_G_T | chr12:132524503 | -0.166 | -0.147 | -0.224 | — |
| chr12_132524516_G_T | chr12:132524516 | -0.093 | -0.085 | -0.294 | — |
| chr12_132524517_A_T | chr12:132524517 | 0.140 | 0.192 | 0.294 | — |
| chr12_132524554_T_G | chr12:132524554 | 0.140 | 0.058 | 0.288 | — |
| chr12_132524438_C_T | chr12:132524438 | 0.138 | 0.119 | 0.282 | <0.001% |
| chr12_132524469_C_A | chr12:132524469 | -0.126 | -0.118 | -0.282 | — |
| chr12_132524497_T_A | chr12:132524497 | 0.160 | 0.148 | 0.224 | — |
| chr12_132524564_G_A | chr12:132524564 | -0.158 | -0.143 | -0.188 | — |
| chr12_132524509_C_G | chr12:132524509 | 0.072 | 0.028 | 0.276 | — |
| chr12_132524453_G_A | chr12:132524453 | -0.095 | -0.110 | -0.271 | — |
| chr12_132524462_G_T | chr12:132524462 | -0.153 | -0.124 | -0.259 | — |
| chr12_132524534_C_G | chr12:132524534 | 0.153 | 0.100 | 0.147 | — |
| chr12_132524486_G_C | chr12:132524486 | 0.151 | 0.098 | 0.176 | — |
| chr12_132524499_A_C | chr12:132524499 | -0.150 | -0.133 | -0.153 | — |
| chr12_132524500_G_A | chr12:132524500 | 0.148 | 0.137 | 0.141 | — |
| chr12_132524501_C_G | chr12:132524501 | -0.148 | -0.136 | -0.259 | — |
| chr12_132524549_G_T | chr12:132524549 | -0.148 | -0.109 | -0.253 | — |
| chr12_132524552_A_C | chr12:132524552 | -0.148 | -0.096 | -0.235 | — |
| chr12_132524565_G_T | chr12:132524565 | -0.148 | -0.164 | -0.247 | — |
| chr12_132524401_C_A | chr12:132524401 | 0.083 | 0.081 | 0.259 | — |
| chr12_132524409_C_G | chr12:132524409 | 0.128 | 0.145 | 0.259 | — |
| chr12_132524434_G_A | chr12:132524434 | 0.131 | 0.117 | 0.259 | — |
| chr12_132524538_G_T | chr12:132524538 | 0.141 | 0.086 | 0.259 | — |
| chr12_132524495_G_A | chr12:132524495 | -0.141 | -0.102 | -0.218 | — |
| chr12_132524438_C_A | chr12:132524438 | 0.110 | 0.102 | 0.247 | — |
| chr12_132524440_T_C | chr12:132524440 | -0.133 | -0.121 | -0.247 | — |
| chr12_132524496_C_A | chr12:132524496 | -0.130 | -0.076 | -0.247 | — |
| chr12_132524496_C_T | chr12:132524496 | -0.128 | -0.090 | -0.247 | — |
| chr12_132524551_C_G | chr12:132524551 | -0.140 | -0.081 | -0.235 | — |
| chr12_132524436_A_C | chr12:132524436 | -0.138 | -0.143 | -0.235 | — |
| chr12_132524497_T_C | chr12:132524497 | 0.138 | 0.082 | 0.176 | <0.001% |
| chr12_132524555_C_T | chr12:132524555 | 0.138 | 0.086 | 0.171 | — |
| chr12_132524516_G_C | chr12:132524516 | 0.136 | 0.060 | 0.000 | — |
| chr12_132524536_G_C | chr12:132524536 | -0.125 | -0.066 | -0.241 | — |
| chr12_132524570_C_T | chr12:132524570 | -0.136 | -0.103 | -0.224 | <0.001% |
| chr12_132524449_C_A | chr12:132524449 | 0.135 | 0.066 | 0.118 | — |
| chr12_132524484_G_T | chr12:132524484 | 0.135 | 0.084 | 0.118 | — |
| chr12_132524563_G_C | chr12:132524563 | -0.135 | -0.063 | -0.135 | — |
| chr12_132524564_G_T | chr12:132524564 | -0.135 | -0.114 | -0.041 | — |
| chr12_132524455_G_T | chr12:132524455 | -0.120 | -0.093 | -0.235 | — |
| chr12_132524464_T_A | chr12:132524464 | -0.126 | -0.072 | -0.235 | — |
| chr12_132524553_G_T | chr12:132524553 | -0.133 | -0.076 | -0.065 | — |
| chr12_132524567_T_G | chr12:132524567 | -0.133 | -0.132 | -0.118 | — |
| chr12_132524551_C_A | chr12:132524551 | -0.128 | -0.052 | -0.188 | — |
| chr12_132524487_G_C | chr12:132524487 | 0.063 | 0.080 | 0.224 | — |
| chr12_132524466_C_A | chr12:132524466 | -0.125 | -0.088 | -0.212 | — |
| chr12_132524528_T_G | chr12:132524528 | 0.123 | 0.079 | 0.094 | — |
| chr12_132524569_C_A | chr12:132524569 | -0.123 | -0.060 | -0.165 | — |
| chr12_132524393_G_C | chr12:132524393 | 0.097 | 0.089 | 0.212 | — |
| chr12_132524475_G_A | chr12:132524475 | -0.070 | -0.090 | -0.212 | 0.0072% |
| chr12_132524574_G_A | chr12:132524574 | -0.118 | -0.074 | -0.212 | — |
| chr12_132524464_T_G | chr12:132524464 | -0.118 | -0.096 | -0.165 | — |
| chr12_132524514_G_C | chr12:132524514 | 0.111 | 0.067 | 0.206 | — |
| chr12_132524572_C_G | chr12:132524572 | -0.116 | -0.075 | -0.129 | — |
| chr12_132524462_G_C | chr12:132524462 | -0.115 | -0.093 | -0.165 | <0.001% |
| chr12_132524507_G_T | chr12:132524507 | -0.115 | -0.107 | -0.200 | — |
| chr12_132524403_T_G | chr12:132524403 | 0.100 | 0.076 | 0.200 | — |
| chr12_132524437_C_G | chr12:132524437 | 0.082 | 0.066 | 0.200 | — |
| chr12_132524455_G_C | chr12:132524455 | 0.113 | 0.057 | 0.141 | — |
| chr12_132524476_T_G | chr12:132524476 | -0.093 | -0.091 | -0.200 | — |
| chr12_132524571_C_T | chr12:132524571 | -0.103 | -0.086 | -0.200 | — |
| chr12_132524572_C_T | chr12:132524572 | -0.113 | -0.082 | -0.141 | 0.0013% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.