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LRRC46
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near LRRC46
chr17:47,731,669..47,937,718, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_47841361_C_T | chr17:47841361 | -1.000 | -0.261 | -1.000 | — |
| chr17_47841365_A_C | chr17:47841365 | -1.000 | -0.292 | -1.000 | — |
| chr17_47841361_C_G | chr17:47841361 | -1.000 | -0.241 | -1.000 | — |
| chr17_47841361_C_A | chr17:47841361 | -1.000 | -0.152 | -1.000 | — |
| chr17_47841366_G_A | chr17:47841366 | -1.000 | -0.518 | -1.000 | — |
| chr17_47841367_G_C | chr17:47841367 | -1.000 | 0.056 | -1.000 | — |
| chr17_47841362_A_C | chr17:47841362 | -1.000 | 0.020 | -1.000 | — |
| chr17_47841360_C_T | chr17:47841360 | -1.000 | -0.028 | -0.918 | — |
| chr17_47841366_G_C | chr17:47841366 | -1.000 | -0.294 | -1.000 | — |
| chr17_47841365_A_T | chr17:47841365 | -1.000 | 0.020 | -1.000 | — |
| chr17_47841366_G_T | chr17:47841366 | -1.000 | -0.061 | -1.000 | — |
| chr17_47841360_C_G | chr17:47841360 | -1.000 | 0.069 | -0.835 | — |
| chr17_47841367_G_T | chr17:47841367 | -1.000 | 0.317 | -0.294 | — |
| chr17_47841365_A_G | chr17:47841365 | -1.000 | 0.091 | -0.376 | — |
| chr17_47841372_G_C | chr17:47841372 | -1.000 | 0.208 | -0.306 | — |
| chr17_47841363_C_T | chr17:47841363 | -1.000 | 0.091 | -0.176 | — |
| chr17_47841283_C_G | chr17:47841283 | -1.000 | -0.820 | -1.000 | — |
| chr17_47841368_G_C | chr17:47841368 | -1.000 | 0.137 | -0.412 | — |
| chr17_47841344_G_C | chr17:47841344 | -1.000 | -0.127 | -0.965 | — |
| chr17_47841345_C_G | chr17:47841345 | -1.000 | 0.086 | -0.600 | — |
| chr17_47841372_G_T | chr17:47841372 | -1.000 | 0.193 | -0.247 | — |
| chr17_47841360_C_A | chr17:47841360 | -1.000 | 0.056 | -0.482 | — |
| chr17_47841290_T_C | chr17:47841290 | -1.000 | -0.563 | -1.000 | — |
| chr17_47841309_C_A | chr17:47841309 | 1.000 | 0.802 | 0.435 | — |
| chr17_47841371_C_G | chr17:47841371 | -1.000 | 0.236 | -0.094 | 0.0020% |
| chr17_47841344_G_T | chr17:47841344 | -1.000 | -0.157 | -0.812 | — |
| chr17_47841363_C_A | chr17:47841363 | -1.000 | 0.066 | -0.271 | — |
| chr17_47841222_A_T | chr17:47841222 | 1.000 | 0.980 | 0.553 | — |
| chr17_47841370_G_C | chr17:47841370 | -1.000 | 0.183 | -0.412 | — |
| chr17_47841223_G_C | chr17:47841223 | 0.962 | 0.645 | 0.659 | — |
| chr17_47841223_G_T | chr17:47841223 | 0.938 | 0.576 | 0.565 | — |
| chr17_47841280_G_C | chr17:47841280 | -0.912 | -0.736 | -1.000 | — |
| chr17_47841281_G_T | chr17:47841281 | -0.908 | -0.655 | -1.000 | — |
| chr17_47841281_G_A | chr17:47841281 | -0.899 | -0.741 | -1.000 | — |
| chr17_47841368_G_A | chr17:47841368 | -0.885 | 0.020 | -0.471 | — |
| chr17_47841300_C_G | chr17:47841300 | -0.735 | -0.810 | -1.000 | — |
| chr17_47841417_C_G | chr17:47841417 | 0.348 | -0.132 | 1.000 | — |
| chr17_47841364_C_G | chr17:47841364 | -0.854 | 0.010 | -0.306 | — |
| chr17_47841272_G_C | chr17:47841272 | -0.842 | -0.426 | -0.918 | — |
| chr17_47841362_A_T | chr17:47841362 | -0.837 | -0.033 | -0.459 | — |
| chr17_47841281_G_C | chr17:47841281 | -0.815 | -0.652 | -1.000 | — |
| chr17_47841298_G_A | chr17:47841298 | -0.626 | -0.759 | -1.000 | — |
| chr17_47841344_G_A | chr17:47841344 | -0.812 | 0.005 | -0.612 | 0.0033% |
| chr17_47841280_G_T | chr17:47841280 | -0.802 | -0.736 | -1.000 | — |
| chr17_47841224_A_T | chr17:47841224 | 0.792 | 0.467 | 0.329 | <0.001% |
| chr17_47841298_G_T | chr17:47841298 | -0.449 | -0.665 | -1.000 | — |
| chr17_47841372_G_A | chr17:47841372 | -0.770 | 0.160 | -0.329 | <0.001% |
| chr17_47841284_G_T | chr17:47841284 | -0.769 | -0.629 | -1.000 | — |
| chr17_47841299_A_T | chr17:47841299 | -0.636 | -0.728 | -1.000 | — |
| chr17_47841224_A_G | chr17:47841224 | 0.762 | 0.523 | 0.482 | — |
| chr17_47841225_C_G | chr17:47841225 | 0.762 | 0.457 | 0.459 | — |
| chr17_47841223_G_A | chr17:47841223 | 0.752 | 0.492 | 0.553 | <0.001% |
| chr17_47841299_A_C | chr17:47841299 | -0.752 | -0.731 | -1.000 | — |
| chr17_47841302_T_C | chr17:47841302 | -0.233 | 0.294 | 1.000 | — |
| chr17_47841299_A_G | chr17:47841299 | -0.729 | -0.815 | -1.000 | — |
| chr17_47841270_C_T | chr17:47841270 | -0.705 | -0.477 | -0.988 | — |
| chr17_47841308_G_A | chr17:47841308 | 0.699 | 0.957 | 0.224 | — |
| chr17_47841297_T_G | chr17:47841297 | -0.696 | -0.799 | -0.859 | — |
| chr17_47841297_T_A | chr17:47841297 | -0.686 | -0.827 | -0.906 | — |
| chr17_47841225_C_T | chr17:47841225 | 0.679 | 0.277 | 0.329 | — |
| chr17_47841300_C_A | chr17:47841300 | -0.532 | -0.624 | -1.000 | — |
| chr17_47841284_G_A | chr17:47841284 | -0.649 | -0.477 | -0.788 | — |
| chr17_47841370_G_A | chr17:47841370 | -0.644 | 0.274 | -0.200 | — |
| chr17_47841298_G_C | chr17:47841298 | -0.373 | -0.398 | -1.000 | — |
| chr17_47841285_G_A | chr17:47841285 | -0.636 | -0.482 | -1.000 | <0.001% |
| chr17_47841225_C_A | chr17:47841225 | 0.632 | 0.320 | 0.318 | — |
| chr17_47841284_G_C | chr17:47841284 | -0.622 | -0.444 | -0.588 | — |
| chr17_47841368_G_T | chr17:47841368 | -0.616 | 0.069 | -0.494 | — |
| chr17_47841285_G_C | chr17:47841285 | -0.614 | -0.513 | -0.882 | — |
| chr17_47841270_C_G | chr17:47841270 | -0.599 | -0.452 | -0.859 | — |
| chr17_47841283_C_A | chr17:47841283 | -0.526 | -0.437 | -1.000 | — |
| chr17_47841280_G_A | chr17:47841280 | -0.596 | -0.518 | -0.824 | <0.001% |
| chr17_47841226_C_G | chr17:47841226 | 0.591 | 0.340 | 0.482 | — |
| chr17_47841279_T_C | chr17:47841279 | -0.586 | -0.510 | -1.000 | — |
| chr17_47841226_C_T | chr17:47841226 | 0.577 | 0.246 | 0.188 | — |
| chr17_47841373_C_A | chr17:47841373 | -0.571 | 0.122 | -0.094 | — |
| chr17_47841247_A_C | chr17:47841247 | -0.569 | -0.234 | -0.459 | — |
| chr17_47841227_C_G | chr17:47841227 | 0.566 | 0.231 | 0.282 | — |
| chr17_47841226_C_A | chr17:47841226 | 0.564 | 0.277 | 0.188 | — |
| chr17_47841227_C_T | chr17:47841227 | 0.532 | 0.269 | 0.212 | — |
| chr17_47841228_C_A | chr17:47841228 | 0.532 | 0.325 | 0.235 | — |
| chr17_47841371_C_T | chr17:47841371 | -0.532 | 0.127 | -0.212 | — |
| chr17_47841297_T_C | chr17:47841297 | -0.526 | -0.655 | -0.600 | — |
| chr17_47841228_C_G | chr17:47841228 | 0.522 | 0.330 | 0.435 | — |
| chr17_47841422_T_C | chr17:47841422 | -0.522 | 0.058 | -0.035 | — |
| chr17_47841303_G_T | chr17:47841303 | -0.516 | -0.221 | -0.518 | — |
| chr17_47841345_C_A | chr17:47841345 | -0.512 | 0.084 | -0.388 | <0.001% |
| chr17_47841306_A_T | chr17:47841306 | 0.509 | 0.457 | 0.059 | — |
| chr17_47841294_A_G | chr17:47841294 | -0.506 | -0.350 | -0.247 | — |
| chr17_47841381_C_G | chr17:47841381 | -0.494 | 0.063 | 0.024 | — |
| chr17_47841399_C_G | chr17:47841399 | -0.491 | -0.018 | -0.188 | — |
| chr17_47841295_G_A | chr17:47841295 | -0.489 | -0.396 | -0.424 | — |
| chr17_47841416_C_A | chr17:47841416 | 0.489 | 0.010 | 0.212 | — |
| chr17_47841303_G_C | chr17:47841303 | -0.223 | -0.297 | -0.859 | — |
| chr17_47841313_C_T | chr17:47841313 | 0.483 | 0.492 | 0.106 | — |
| chr17_47841416_C_G | chr17:47841416 | 0.483 | -0.053 | 0.094 | — |
| chr17_47841287_G_A | chr17:47841287 | -0.479 | -0.206 | -0.329 | — |
| chr17_47841315_G_A | chr17:47841315 | 0.479 | 0.673 | 0.259 | — |
| chr17_47841441_C_G | chr17:47841441 | 0.401 | 0.069 | 0.847 | — |
| chr17_47841252_C_T | chr17:47841252 | 0.060 | 0.332 | 0.812 | — |
| chr17_47841243_T_G | chr17:47841243 | -0.456 | -0.175 | -0.224 | — |
| chr17_47841282_G_C | chr17:47841282 | -0.456 | -0.170 | -0.024 | — |
| chr17_47841383_A_C | chr17:47841383 | -0.451 | 0.109 | -0.059 | — |
| chr17_47841287_G_C | chr17:47841287 | -0.449 | -0.274 | -0.647 | — |
| chr17_47841287_G_T | chr17:47841287 | -0.383 | -0.292 | -0.788 | — |
| chr17_47841348_C_T | chr17:47841348 | 0.032 | 0.109 | 0.788 | — |
| chr17_47841389_C_G | chr17:47841389 | -0.446 | 0.211 | 0.588 | — |
| chr17_47841417_C_A | chr17:47841417 | 0.343 | -0.147 | 0.788 | <0.001% |
| chr17_47841294_A_C | chr17:47841294 | -0.439 | -0.343 | -0.341 | — |
| chr17_47841440_G_C | chr17:47841440 | -0.436 | -0.051 | -0.294 | — |
| chr17_47841292_T_A | chr17:47841292 | 0.020 | -0.119 | -0.765 | — |
| chr17_47841409_A_G | chr17:47841409 | -0.431 | -0.094 | -0.176 | — |
| chr17_47841283_C_T | chr17:47841283 | -0.429 | -0.274 | -0.729 | — |
| chr17_47841371_C_A | chr17:47841371 | -0.429 | 0.132 | -0.282 | — |
| chr17_47841324_T_G | chr17:47841324 | 0.238 | -0.147 | 0.753 | — |
| chr17_47841343_T_G | chr17:47841343 | -0.416 | 0.066 | -0.376 | — |
| chr17_47841351_C_G | chr17:47841351 | -0.413 | 0.117 | -0.306 | — |
| chr17_47841285_G_T | chr17:47841285 | -0.399 | -0.353 | -0.682 | — |
| chr17_47841288_A_G | chr17:47841288 | -0.399 | -0.269 | -0.259 | <0.001% |
| chr17_47841227_C_A | chr17:47841227 | 0.396 | 0.150 | 0.082 | — |
| chr17_47841246_C_G | chr17:47841246 | -0.393 | -0.137 | 0.071 | — |
| chr17_47841261_T_C | chr17:47841261 | 0.339 | 0.452 | 0.694 | — |
| chr17_47841275_C_A | chr17:47841275 | -0.393 | -0.297 | -0.306 | — |
| chr17_47841326_G_C | chr17:47841326 | -0.393 | -0.272 | -0.271 | — |
| chr17_47841272_G_A | chr17:47841272 | -0.389 | -0.256 | -0.518 | — |
| chr17_47841272_G_T | chr17:47841272 | -0.386 | -0.226 | -0.471 | — |
| chr17_47841282_G_A | chr17:47841282 | -0.386 | -0.244 | -0.259 | — |
| chr17_47841282_G_T | chr17:47841282 | -0.386 | -0.081 | 0.118 | — |
| chr17_47841293_C_T | chr17:47841293 | -0.316 | -0.317 | -0.682 | — |
| chr17_47841316_C_G | chr17:47841316 | -0.386 | -0.282 | -0.212 | — |
| chr17_47841415_A_C | chr17:47841415 | -0.376 | -0.046 | 0.129 | — |
| chr17_47841414_C_G | chr17:47841414 | 0.374 | 0.135 | 0.529 | — |
| chr17_47841431_T_C | chr17:47841431 | -0.374 | -0.003 | -0.012 | — |
| chr17_47841204_T_C | chr17:47841204 | -0.216 | -0.185 | -0.659 | <0.001% |
| chr17_47841240_G_A | chr17:47841240 | -0.146 | -0.119 | -0.659 | — |
| chr17_47841373_C_G | chr17:47841373 | -0.371 | 0.063 | -0.035 | — |
| chr17_47841275_C_G | chr17:47841275 | -0.369 | -0.327 | -0.506 | — |
| chr17_47841293_C_A | chr17:47841293 | -0.369 | -0.310 | -0.612 | — |
| chr17_47841370_G_T | chr17:47841370 | -0.369 | 0.099 | -0.282 | — |
| chr17_47841302_T_A | chr17:47841302 | -0.366 | -0.102 | 0.494 | — |
| chr17_47841414_C_A | chr17:47841414 | 0.366 | 0.018 | 0.212 | — |
| chr17_47841268_G_C | chr17:47841268 | 0.359 | 0.203 | 0.506 | — |
| chr17_47841271_C_T | chr17:47841271 | -0.309 | -0.292 | -0.635 | — |
| chr17_47841289_C_A | chr17:47841289 | -0.343 | -0.292 | -0.635 | — |
| chr17_47841294_A_T | chr17:47841294 | -0.359 | -0.284 | -0.212 | — |
| chr17_47841321_G_T | chr17:47841321 | 0.140 | -0.236 | 0.635 | — |
| chr17_47841306_A_C | chr17:47841306 | 0.356 | 0.249 | 0.153 | — |
| chr17_47841293_C_G | chr17:47841293 | -0.290 | -0.297 | -0.624 | — |
| chr17_47841343_T_A | chr17:47841343 | -0.353 | 0.155 | -0.353 | — |
| chr17_47841286_A_C | chr17:47841286 | -0.349 | -0.234 | -0.294 | — |
| chr17_47841381_C_A | chr17:47841381 | -0.349 | 0.066 | 0.012 | — |
| chr17_47841249_C_G | chr17:47841249 | 0.053 | 0.221 | 0.612 | — |
| chr17_47841463_C_A | chr17:47841463 | -0.130 | -0.142 | -0.612 | — |
| chr17_47841220_C_G | chr17:47841220 | -0.135 | -0.208 | -0.600 | — |
| chr17_47841323_G_T | chr17:47841323 | -0.336 | -0.320 | -0.412 | — |
| chr17_47841237_C_T | chr17:47841237 | 0.140 | 0.307 | 0.588 | — |
| chr17_47841334_A_T | chr17:47841334 | 0.120 | -0.175 | -0.588 | — |
| chr17_47841359_T_C | chr17:47841359 | -0.333 | -0.015 | -0.165 | — |
| chr17_47841279_T_A | chr17:47841279 | -0.270 | -0.256 | -0.576 | — |
| chr17_47841306_A_G | chr17:47841306 | -0.326 | -0.241 | -0.318 | — |
| chr17_47841310_C_T | chr17:47841310 | -0.326 | -0.269 | 0.047 | — |
| chr17_47841232_T_C | chr17:47841232 | -0.323 | -0.216 | -0.365 | — |
| chr17_47841286_A_T | chr17:47841286 | -0.323 | -0.193 | -0.388 | — |
| chr17_47841271_C_A | chr17:47841271 | -0.309 | -0.269 | -0.565 | — |
| chr17_47841317_C_G | chr17:47841317 | -0.319 | -0.310 | -0.306 | — |
| chr17_47841369_C_G | chr17:47841369 | 0.105 | 0.145 | 0.565 | — |
| chr17_47841326_G_A | chr17:47841326 | 0.313 | 0.332 | 0.129 | — |
| chr17_47841336_C_G | chr17:47841336 | -0.156 | 0.107 | 0.553 | — |
| chr17_47841221_A_C | chr17:47841221 | 0.309 | 0.259 | 0.176 | — |
| chr17_47841352_G_C | chr17:47841352 | -0.309 | -0.051 | -0.282 | — |
| chr17_47841377_T_C | chr17:47841377 | -0.309 | 0.140 | 0.082 | — |
| chr17_47841310_C_G | chr17:47841310 | -0.306 | -0.284 | 0.094 | — |
| chr17_47841346_A_C | chr17:47841346 | -0.306 | 0.063 | -0.306 | — |
| chr17_47841413_C_A | chr17:47841413 | 0.303 | 0.041 | 0.047 | <0.001% |
| chr17_47841249_C_A | chr17:47841249 | -0.261 | -0.236 | -0.529 | — |
| chr17_47841295_G_C | chr17:47841295 | -0.300 | -0.414 | 0.471 | — |
| chr17_47841269_G_A | chr17:47841269 | 0.293 | 0.124 | 0.200 | — |
| chr17_47841244_G_C | chr17:47841244 | -0.286 | -0.147 | -0.365 | 0.0066% |
| chr17_47841278_T_G | chr17:47841278 | 0.286 | 0.142 | 0.376 | — |
| chr17_47841296_G_A | chr17:47841296 | -0.286 | -0.274 | -0.224 | — |
| chr17_47841349_T_C | chr17:47841349 | -0.286 | 0.013 | -0.188 | — |
| chr17_47841296_G_T | chr17:47841296 | -0.283 | -0.363 | -0.376 | — |
| chr17_47841358_T_G | chr17:47841358 | 0.281 | 0.066 | 0.376 | — |
| chr17_47841411_T_G | chr17:47841411 | -0.281 | -0.005 | 0.129 | — |
| chr17_47841206_A_C | chr17:47841206 | 0.220 | 0.066 | -0.494 | — |
| chr17_47841279_T_G | chr17:47841279 | -0.216 | -0.246 | -0.494 | — |
| chr17_47841291_C_T | chr17:47841291 | -0.220 | -0.127 | -0.494 | <0.001% |
| chr17_47841416_C_T | chr17:47841416 | 0.280 | -0.124 | 0.000 | 0.044% |
| chr17_47841244_G_A | chr17:47841244 | -0.276 | -0.190 | -0.353 | — |
| chr17_47841218_T_G | chr17:47841218 | 0.100 | 0.284 | 0.482 | — |
| chr17_47841314_G_C | chr17:47841314 | -0.240 | -0.114 | 0.482 | — |
| chr17_47841337_G_T | chr17:47841337 | -0.003 | 0.259 | 0.482 | — |
| chr17_47841414_C_T | chr17:47841414 | 0.273 | 0.094 | 0.000 | — |
| chr17_47841428_T_C | chr17:47841428 | 0.273 | 0.107 | 0.459 | — |
| chr17_47841275_C_T | chr17:47841275 | -0.266 | -0.193 | -0.447 | — |
| chr17_47841377_T_G | chr17:47841377 | -0.265 | 0.119 | 0.118 | — |
| chr17_47841491_A_C | chr17:47841491 | 0.265 | 0.015 | 0.176 | — |
| chr17_47841349_T_G | chr17:47841349 | -0.263 | 0.051 | -0.035 | — |
| chr17_47841381_C_T | chr17:47841381 | -0.261 | 0.008 | -0.024 | — |
| chr17_47841355_G_A | chr17:47841355 | -0.030 | 0.099 | 0.459 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.