MEGF6

Scored variants near MEGF6

chr1:3,387,950..3,711,508, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr1_3410329_C_G	chr1:3410329	-1.000	-0.265	-1.000	<0.001%
chr1_3410334_G_A	chr1:3410334	-1.000	-0.223	-1.000	0.0013%
chr1_3423671_G_A	chr1:3423671	0.899	0.997	1.000	0.0033%
chr1_3410332_C_T	chr1:3410332	-0.835	-0.255	-0.918	<0.001%
chr1_3424883_G_T	chr1:3424883	-0.679	-0.536	-1.000	0.0013%
chr1_3410322_C_T	chr1:3410322	-0.765	-0.217	-0.894	0.449%
chr1_3423635_G_C	chr1:3423635	-0.499	-0.747	-1.000	<0.001%
chr1_3423640_G_A	chr1:3423640	0.671	0.693	1.000	<0.001%
chr1_3424873_G_A	chr1:3424873	-0.459	-0.405	-1.000	<0.001%
chr1_3423573_G_C	chr1:3423573	-0.225	-0.340	-0.929	<0.001%
chr1_3423572_T_C	chr1:3423572	0.483	0.461	0.776	<0.001%
chr1_3423636_G_T	chr1:3423636	-0.348	-0.421	-0.835	0.0020%
chr1_3424822_C_G	chr1:3424822	0.433	0.105	0.435	0.0014%
chr1_3423695_C_T	chr1:3423695	-0.393	-0.448	-0.765	0.508%
chr1_3423636_G_C	chr1:3423636	-0.331	-0.406	-0.747	0.0026%
chr1_3423624_G_T	chr1:3423624	-0.404	-0.330	-0.441	<0.001%
chr1_3423522_C_A	chr1:3423522	-0.359	-0.484	-0.712	<0.001%
chr1_3424821_C_T	chr1:3424821	0.391	0.076	0.250	<0.001%
chr1_3423591_C_G	chr1:3423591	-0.389	-0.444	-0.671	<0.001%
chr1_3424823_C_A	chr1:3424823	0.369	0.067	0.244	<0.001%
chr1_3423620_C_T	chr1:3423620	-0.231	-0.425	-0.624	<0.001%
chr1_3423610_G_T	chr1:3423610	0.286	0.293	0.600	<0.001%
chr1_3423707_G_A	chr1:3423707	-0.173	-0.241	-0.547	0.0072%
chr1_3403540_C_G	chr1:3403540	0.190	0.148	0.538	<0.001%
chr1_3410317_C_T	chr1:3410317	-0.296	-0.081	-0.359	0.0013%
chr1_3423561_G_A	chr1:3423561	-0.240	-0.324	-0.524	0.0033%
chr1_3423670_C_T	chr1:3423670	-0.288	-0.435	-0.524	<0.001%
chr1_3410292_G_C	chr1:3410292	-0.293	-0.051	-0.297	<0.001%
chr1_3423495_G_A	chr1:3423495	0.288	0.142	0.406	0.014%
chr1_3403556_G_A	chr1:3403556	0.217	0.171	0.506	0.0020%
chr1_3410285_C_G	chr1:3410285	0.276	0.060	0.241	0.0013%
chr1_3423560_C_G	chr1:3423560	-0.153	-0.189	-0.488	<0.001%
chr1_3423609_C_T	chr1:3423609	-0.120	-0.164	-0.465	0.0046%
chr1_3423466_G_A	chr1:3423466	-0.261	-0.345	-0.388	<0.001%
chr1_3410282_C_T	chr1:3410282	0.256	0.032	0.209	<0.001%
chr1_3423667_G_A	chr1:3423667	-0.238	-0.368	-0.447	0.0026%
chr1_3423523_G_A	chr1:3423523	0.251	0.288	0.418	0.011%
chr1_3423632_C_T	chr1:3423632	-0.233	-0.207	-0.435	0.0046%
chr1_3423701_C_T	chr1:3423701	-0.138	-0.180	-0.424	<0.001%
chr1_3424824_T_G	chr1:3424824	0.237	0.060	0.229	<0.001%
chr1_3424882_A_C	chr1:3424882	0.149	0.135	0.412	<0.001%
chr1_3423397_C_G	chr1:3423397	0.172	0.056	0.400	<0.001%
chr1_3414219_G_C	chr1:3414219	0.065	0.093	0.397	<0.001%
chr1_3424827_G_C	chr1:3424827	0.219	0.057	0.215	<0.001%
chr1_3423624_G_A	chr1:3423624	0.218	0.168	0.335	0.028%
chr1_3423382_C_T	chr1:3423382	-0.131	-0.212	-0.382	0.0013%
chr1_3423628_G_A	chr1:3423628	0.116	0.253	0.382	0.016%
chr1_3423544_C_T	chr1:3423544	-0.211	-0.001	-0.188	0.0033%
chr1_3423722_G_A	chr1:3423722	-0.211	-0.234	-0.329	<0.001%
chr1_3423522_C_T	chr1:3423522	-0.191	-0.274	-0.371	0.0013%
chr1_3423534_C_G	chr1:3423534	0.210	0.187	0.282	<0.001%
chr1_3423666_G_C	chr1:3423666	-0.196	-0.334	-0.371	0.0020%
chr1_3423669_A_G	chr1:3423669	0.200	0.330	0.294	<0.001%
chr1_3423567_A_T	chr1:3423567	0.198	0.150	0.341	0.065%
chr1_3423381_C_T	chr1:3423381	-0.089	-0.145	-0.335	<0.001%
chr1_3423569_C_T	chr1:3423569	0.140	0.183	0.318	<0.001%
chr1_3423552_A_G	chr1:3423552	-0.135	-0.260	-0.312	96.3%
chr1_3423488_C_T	chr1:3423488	-0.142	-0.242	-0.306	<0.001%
chr1_3410439_G_T	chr1:3410439	-0.033	-0.033	-0.300	<0.001%
chr1_3423633_G_A	chr1:3423633	-0.168	-0.203	-0.206	0.0059%
chr1_3423545_G_A	chr1:3423545	-0.116	-0.145	-0.282	<0.001%
chr1_3423550_T_C	chr1:3423550	-0.131	-0.223	-0.282	<0.001%
chr1_3423557_G_A	chr1:3423557	-0.156	-0.155	-0.065	0.0013%
chr1_3423610_G_A	chr1:3423610	0.070	0.187	0.276	0.0053%
chr1_3423632_C_G	chr1:3423632	0.150	0.311	-0.059	<0.001%
chr1_3423617_C_T	chr1:3423617	0.145	0.061	0.129	0.0013%
chr1_3410404_T_A	chr1:3410404	-0.078	-0.009	-0.253	<0.001%
chr1_3423399_C_A	chr1:3423399	-0.141	-0.160	-0.253	0.0013%
chr1_3423479_A_G	chr1:3423479	0.142	0.042	0.176	<0.001%
chr1_3423357_C_G	chr1:3423357	-0.078	-0.162	-0.247	3.25%
chr1_3423493_C_T	chr1:3423493	-0.112	-0.108	-0.247	<0.001%
chr1_3423609_C_A	chr1:3423609	-0.073	-0.077	-0.241	<0.001%
chr1_3423671_G_T	chr1:3423671	-0.133	-0.201	-0.241	4.55%
chr1_3410339_G_C	chr1:3410339	-0.131	-0.060	-0.118	0.011%
chr1_3423403_G_A	chr1:3423403	0.023	-0.199	-0.229	0.014%
chr1_3423658_C_T	chr1:3423658	-0.128	-0.211	-0.206	0.0085%
chr1_3423364_G_A	chr1:3423364	-0.042	-0.075	-0.224	<0.001%
chr1_3423547_G_A	chr1:3423547	-0.123	-0.058	-0.194	<0.001%
chr1_3389548_G_A	chr1:3389548	0.088	0.095	0.213	0.0013%
chr1_3423499_A_C	chr1:3423499	-0.120	-0.180	-0.159	<0.001%
chr1_3423621_A_G	chr1:3423621	0.033	-0.044	0.212	<0.001%
chr1_3423432_C_T	chr1:3423432	0.117	0.085	0.094	0.0026%
chr1_3403571_G_A	chr1:3403571	0.106	0.058	0.206	<0.001%
chr1_3423416_G_C	chr1:3423416	0.116	0.065	0.112	<0.001%
chr1_3423436_A_T	chr1:3423436	0.010	-0.006	0.206	<0.001%
chr1_3423936_G_A	chr1:3423936	0.106	0.079	0.206	—
chr1_3414363_A_G	chr1:3414363	-0.025	-0.044	-0.203	<0.001%
chr1_3423985_C_A	chr1:3423985	0.105	0.063	0.200	—
chr1_3410318_G_A	chr1:3410318	0.111	0.030	0.106	0.0020%
chr1_3423971_C_A	chr1:3423971	0.111	0.080	0.153	—
chr1_3403541_C_G	chr1:3403541	-0.073	-0.030	-0.194	0.0013%
chr1_3423359_G_A	chr1:3423359	-0.102	-0.160	-0.194	1.27%
chr1_3423316_G_T	chr1:3423316	-0.041	-0.076	-0.188	2.44%
chr1_3423532_G_A	chr1:3423532	-0.106	-0.164	-0.159	<0.001%
chr1_3423590_C_T	chr1:3423590	0.106	0.084	-0.094	0.0020%
chr1_3403546_A_G	chr1:3403546	-0.065	-0.019	-0.185	0.016%
chr1_3410229_A_C	chr1:3410229	0.105	0.018	0.076	<0.001%
chr1_3423508_C_A	chr1:3423508	-0.067	-0.142	-0.182	<0.001%
chr1_3423528_G_A	chr1:3423528	-0.042	-0.067	-0.182	<0.001%
chr1_3423898_C_G	chr1:3423898	-0.042	-0.028	-0.182	0.0026%
chr1_3389710_C_A	chr1:3389710	0.102	0.096	0.041	0.108%
chr1_3414238_G_T	chr1:3414238	-0.021	-0.026	-0.179	0.0026%
chr1_3423394_G_A	chr1:3423394	0.101	0.020	0.124	<0.001%
chr1_3423560_C_T	chr1:3423560	0.013	0.047	-0.176	<0.001%
chr1_3423647_C_T	chr1:3423647	-0.100	-0.138	-0.124	<0.001%
chr1_3410292_G_A	chr1:3410292	-0.093	-0.011	-0.112	0.083%
chr1_3423312_C_A	chr1:3423312	0.082	0.109	0.165	<0.001%
chr1_3423320_G_A	chr1:3423320	-0.032	-0.074	-0.165	<0.001%
chr1_3423319_C_T	chr1:3423319	-0.014	-0.072	-0.159	0.0046%
chr1_3423733_G_A	chr1:3423733	-0.065	-0.082	-0.159	<0.001%
chr1_3423547_G_C	chr1:3423547	0.088	0.074	0.076	<0.001%
chr1_3423493_C_G	chr1:3423493	-0.087	-0.065	-0.118	<0.001%
chr1_3423414_T_C	chr1:3423414	0.087	0.132	0.147	<0.001%
chr1_3423602_T_C	chr1:3423602	0.025	0.195	0.153	<0.001%
chr1_3423826_T_C	chr1:3423826	-0.015	-0.030	-0.153	<0.001%
chr1_3423898_C_A	chr1:3423898	-0.056	-0.038	-0.153	—
chr1_3423489_C_T	chr1:3423489	0.085	0.076	0.141	0.0013%
chr1_3410265_T_C	chr1:3410265	0.083	0.020	0.053	<0.001%
chr1_3423490_G_A	chr1:3423490	-0.046	-0.094	-0.147	0.0013%
chr1_3423774_C_T	chr1:3423774	-0.065	-0.046	-0.147	<0.001%
chr1_3423474_T_G	chr1:3423474	-0.080	-0.199	-0.082	0.0013%
chr1_3423458_C_A	chr1:3423458	0.078	0.063	0.129	<0.001%
chr1_3424903_C_A	chr1:3424903	0.056	0.039	0.135	0.0020%
chr1_3423868_T_A	chr1:3423868	0.075	0.022	0.118	—
chr1_3423405_G_T	chr1:3423405	0.073	0.109	0.041	<0.001%
chr1_3423417_C_T	chr1:3423417	-0.032	-0.049	-0.129	<0.001%
chr1_3423864_G_T	chr1:3423864	-0.054	-0.009	-0.129	—
chr1_3424813_T_C	chr1:3424813	0.005	0.000	0.129	0.0013%
chr1_3389799_G_C	chr1:3389799	-0.046	-0.048	0.126	0.0013%
chr1_3414251_G_C	chr1:3414251	0.031	0.018	0.126	<0.001%
chr1_3423581_G_A	chr1:3423581	-0.072	-0.096	-0.094	<0.001%
chr1_3389717_C_T	chr1:3389717	0.042	0.034	-0.125	0.0013%
chr1_3410291_C_T	chr1:3410291	-0.010	-0.008	-0.124	<0.001%
chr1_3410314_G_A	chr1:3410314	-0.058	-0.018	-0.124	0.0013%
chr1_3423345_C_T	chr1:3423345	0.062	0.066	0.124	0.026%
chr1_3423944_C_A	chr1:3423944	-0.017	-0.018	-0.124	—
chr1_3424764_T_G	chr1:3424764	0.057	0.001	0.124	<0.001%
chr1_3424819_G_C	chr1:3424819	-0.069	-0.005	-0.074	<0.001%
chr1_3424872_C_T	chr1:3424872	0.047	0.055	0.121	0.0039%
chr1_3423398_C_G	chr1:3423398	-0.067	-0.143	-0.041	0.013%
chr1_3389630_G_A	chr1:3389630	0.067	0.053	0.071	0.0013%
chr1_3423931_C_A	chr1:3423931	-0.006	-0.019	-0.118	—
chr1_3423934_A_C	chr1:3423934	0.012	0.008	0.118	—
chr1_3423944_C_T	chr1:3423944	-0.022	-0.011	-0.118	—
chr1_3410380_G_A	chr1:3410380	-0.066	0.006	-0.088	0.0013%
chr1_3389678_G_C	chr1:3389678	-0.010	-0.019	-0.115	0.0013%
chr1_3423358_C_T	chr1:3423358	-0.065	-0.165	-0.094	0.0020%
chr1_3424815_T_C	chr1:3424815	0.015	0.019	0.115	0.0014%
chr1_3410358_C_A	chr1:3410358	0.064	0.018	0.009	0.0020%
chr1_3423402_C_G	chr1:3423402	-0.064	-0.004	-0.076	0.0079%
chr1_3410238_A_G	chr1:3410238	-0.063	-0.016	-0.079	0.0046%
chr1_3410371_G_A	chr1:3410371	0.063	-0.010	0.026	<0.001%
chr1_3423872_A_T	chr1:3423872	-0.012	-0.023	-0.112	—
chr1_3423878_A_C	chr1:3423878	0.016	0.009	0.112	—
chr1_3423898_C_T	chr1:3423898	-0.060	0.005	-0.112	0.0013%
chr1_3424848_G_A	chr1:3424848	-0.046	-0.036	-0.112	0.0053%
chr1_3423391_G_T	chr1:3423391	-0.062	-0.008	-0.035	<0.001%
chr1_3410261_C_A	chr1:3410261	0.062	0.014	-0.088	0.021%
chr1_3389762_T_A	chr1:3389762	0.060	0.065	-0.069	<0.001%
chr1_3403612_G_C	chr1:3403612	0.000	0.018	-0.106	<0.001%
chr1_3423433_G_C	chr1:3423433	-0.045	-0.022	-0.106	0.0053%
chr1_3423864_G_A	chr1:3423864	-0.015	-0.001	-0.106	—
chr1_3423944_C_G	chr1:3423944	-0.023	-0.009	-0.106	—
chr1_3423983_C_T	chr1:3423983	0.044	0.023	0.106	—
chr1_3424771_G_A	chr1:3424771	0.001	-0.016	-0.106	<0.001%
chr1_3424840_G_T	chr1:3424840	-0.011	-0.014	-0.106	<0.001%
chr1_3424847_C_T	chr1:3424847	0.001	-0.020	-0.106	0.141%
chr1_3389668_C_A	chr1:3389668	0.057	0.075	-0.104	<0.001%
chr1_3423469_C_T	chr1:3423469	-0.058	-0.077	-0.065	<0.001%
chr1_3423762_C_T	chr1:3423762	0.058	0.057	0.076	0.020%
chr1_3423892_T_A	chr1:3423892	0.058	0.066	0.029	—
chr1_3410207_A_C	chr1:3410207	-0.057	-0.003	0.050	0.015%
chr1_3410242_G_C	chr1:3410242	0.000	-0.034	-0.100	<0.001%
chr1_3423494_C_T	chr1:3423494	-0.042	-0.049	-0.100	0.0072%
chr1_3423977_A_G	chr1:3423977	0.011	0.038	0.100	—
chr1_3424885_C_T	chr1:3424885	-0.016	-0.024	-0.100	<0.001%
chr1_3403556_G_C	chr1:3403556	0.042	0.022	0.097	<0.001%
chr1_3410232_C_G	chr1:3410232	-0.055	-0.013	-0.056	13.4%
chr1_3414252_G_A	chr1:3414252	0.030	0.016	0.097	<0.001%
chr1_3423406_T_C	chr1:3423406	0.055	0.091	0.094	<0.001%
chr1_3423142_T_G	chr1:3423142	-0.001	0.020	0.094	0.0046%
chr1_3423705_C_T	chr1:3423705	-0.052	-0.103	-0.094	78.3%
chr1_3423733_G_C	chr1:3423733	0.047	0.025	0.094	0.0020%
chr1_3423914_G_C	chr1:3423914	0.000	0.008	0.094	—
chr1_3423931_C_G	chr1:3423931	-0.032	-0.028	-0.094	—
chr1_3424901_G_A	chr1:3424901	0.019	0.046	0.094	<0.001%
chr1_3410186_T_G	chr1:3410186	-0.052	-0.010	-0.059	0.0013%
chr1_3423402_C_A	chr1:3423402	-0.052	-0.011	-0.047	0.0046%
chr1_3410267_G_A	chr1:3410267	0.050	0.025	-0.021	<0.001%
chr1_3410300_C_G	chr1:3410300	-0.050	0.000	0.006	<0.001%
chr1_3410370_G_A	chr1:3410370	0.050	0.001	0.026	0.0092%
chr1_3423618_G_A	chr1:3423618	-0.050	-0.036	0.029	0.0046%
chr1_3423901_A_G	chr1:3423901	0.035	0.051	-0.088	—
chr1_3423921_C_T	chr1:3423921	-0.002	0.004	-0.088	0.0013%
chr1_3423925_T_A	chr1:3423925	0.011	0.009	0.088	—
chr1_3423974_A_T	chr1:3423974	-0.017	-0.018	-0.088	—
chr1_3389610_G_C	chr1:3389610	0.034	0.053	0.087	0.0013%
chr1_3410310_G_A	chr1:3410310	0.048	0.022	0.032	<0.001%
chr1_3410361_G_A	chr1:3410361	-0.020	-0.011	-0.085	<0.001%
chr1_3423706_C_T	chr1:3423706	-0.048	-0.060	-0.082	0.0020%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.