Home / Gene

NXN

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near NXN

chr17:699,310..1,079,776, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr17_715810_T_C	chr17:715810	-0.912	-0.992	-1.000	<0.001%
chr17_714940_T_C	chr17:714940	0.439	0.345	1.000	<0.001%
chr17_714731_G_C	chr17:714731	-0.263	-0.373	-1.000	<0.001%
chr17_732297_C_T	chr17:732297	0.428	0.170	1.000	0.0013%
chr17_715737_G_A	chr17:715737	-0.622	-0.655	-0.653	0.0026%
chr17_715821_C_T	chr17:715821	-0.594	-0.477	-0.676	0.0020%
chr17_715755_T_C	chr17:715755	0.527	0.470	0.453	0.0046%
chr17_714952_C_T	chr17:714952	0.398	0.218	0.894	0.013%
chr17_714876_C_G	chr17:714876	0.100	-0.277	-0.882	0.156%
chr17_732590_C_G	chr17:732590	-0.461	-0.045	-0.459	<0.001%
chr17_714723_C_T	chr17:714723	0.201	0.216	0.788	<0.001%
chr17_714727_T_C	chr17:714727	-0.153	-0.213	-0.788	0.0066%
chr17_732592_C_T	chr17:732592	0.391	0.071	0.787	<0.001%
chr17_715758_A_G	chr17:715758	-0.443	-0.419	-0.424	0.0033%
chr17_715685_A_C	chr17:715685	-0.436	-0.406	-0.612	<0.001%
chr17_732623_C_A	chr17:732623	0.419	0.064	0.605	—
chr17_715759_T_A	chr17:715759	-0.418	-0.335	-0.371	0.108%
chr17_715779_A_T	chr17:715779	-0.416	-0.396	-0.324	<0.001%
chr17_714957_T_C	chr17:714957	-0.090	-0.259	-0.729	<0.001%
chr17_732620_C_T	chr17:732620	0.403	0.047	0.579	—
chr17_714857_C_G	chr17:714857	0.206	-0.185	-0.706	<0.001%
chr17_714726_C_G	chr17:714726	0.181	0.152	0.682	<0.001%
chr17_714888_A_C	chr17:714888	0.379	0.261	0.318	0.0020%
chr17_732614_C_A	chr17:732614	0.125	0.055	0.645	0.0027%
chr17_715543_A_T	chr17:715543	0.189	0.094	0.635	0.0033%
chr17_715815_C_T	chr17:715815	-0.359	-0.327	-0.418	<0.001%
chr17_732464_C_A	chr17:732464	-0.351	-0.005	-0.236	<0.001%
chr17_715830_G_A	chr17:715830	-0.348	-0.203	-0.453	0.0059%
chr17_714936_G_A	chr17:714936	-0.290	-0.089	-0.612	0.0013%
chr17_714947_G_A	chr17:714947	0.216	0.102	0.612	<0.001%
chr17_714853_C_A	chr17:714853	0.339	0.000	-0.235	0.0013%
chr17_715697_C_A	chr17:715697	-0.339	-0.302	-0.482	0.098%
chr17_715860_T_G	chr17:715860	0.336	0.282	0.506	<0.001%
chr17_732623_C_T	chr17:732623	0.336	0.063	0.560	—
chr17_714740_C_T	chr17:714740	0.083	0.180	0.588	<0.001%
chr17_714548_G_C	chr17:714548	-0.037	-0.091	-0.576	0.0046%
chr17_715861_G_C	chr17:715861	0.323	0.274	0.335	0.0013%
chr17_732399_C_A	chr17:732399	0.323	0.051	0.210	0.024%
chr17_732622_G_T	chr17:732622	0.058	0.044	0.570	—
chr17_732460_C_G	chr17:732460	0.321	0.011	0.177	0.0020%
chr17_715542_G_C	chr17:715542	0.139	0.046	0.565	0.0066%
chr17_732599_C_T	chr17:732599	0.125	0.057	0.565	<0.001%
chr17_732591_G_A	chr17:732591	0.233	0.058	0.561	0.0080%
chr17_715829_T_C	chr17:715829	0.316	0.322	0.365	0.0013%
chr17_714737_C_T	chr17:714737	0.131	0.178	0.553	<0.001%
chr17_714857_C_T	chr17:714857	0.256	-0.122	-0.553	<0.001%
chr17_714882_C_A	chr17:714882	0.313	0.180	0.306	<0.001%
chr17_732132_T_C	chr17:732132	-0.050	-0.049	-0.551	0.0053%
chr17_732619_C_T	chr17:732619	0.083	0.048	0.545	—
chr17_714932_G_T	chr17:714932	-0.171	-0.079	-0.541	0.0013%
chr17_715526_T_C	chr17:715526	0.141	0.074	0.541	<0.001%
chr17_715160_C_T	chr17:715160	0.016	0.203	0.518	0.0014%
chr17_726258_A_G	chr17:726258	0.166	0.204	0.518	0.0013%
chr17_732523_G_A	chr17:732523	-0.291	-0.027	-0.149	<0.001%
chr17_732616_G_A	chr17:732616	0.100	0.060	0.507	—
chr17_732596_G_T	chr17:732596	0.231	0.042	0.506	<0.001%
chr17_714934_C_G	chr17:714934	-0.270	-0.025	0.494	<0.001%
chr17_715582_T_C	chr17:715582	0.194	0.041	0.494	<0.001%
chr17_732458_A_G	chr17:732458	0.278	0.010	0.166	<0.001%
chr17_732619_C_A	chr17:732619	0.032	0.030	0.489	—
chr17_732610_C_T	chr17:732610	0.235	0.053	0.487	1.13%
chr17_714750_A_C	chr17:714750	-0.203	-0.119	-0.482	0.0026%
chr17_714815_G_A	chr17:714815	0.273	0.277	0.294	0.0020%
chr17_732617_C_T	chr17:732617	-0.030	0.044	0.479	—
chr17_715757_G_A	chr17:715757	-0.268	-0.236	-0.118	0.0046%
chr17_732584_C_G	chr17:732584	0.268	0.040	0.455	<0.001%
chr17_715551_T_G	chr17:715551	0.169	0.008	0.471	0.0013%
chr17_732534_G_A	chr17:732534	0.266	0.057	0.431	0.0040%
chr17_714856_C_T	chr17:714856	0.246	-0.063	-0.459	<0.001%
chr17_715533_T_G	chr17:715533	0.117	0.048	0.459	0.014%
chr17_732613_G_A	chr17:732613	0.087	0.039	0.459	0.0040%
chr17_732564_G_T	chr17:732564	-0.259	-0.003	-0.358	0.0027%
chr17_732573_G_A	chr17:732573	0.213	0.056	0.457	<0.001%
chr17_732558_C_A	chr17:732558	0.258	0.029	0.340	<0.001%
chr17_732564_G_C	chr17:732564	0.258	0.028	0.186	<0.001%
chr17_715827_G_A	chr17:715827	0.255	0.269	0.188	<0.001%
chr17_714805_G_T	chr17:714805	-0.093	-0.145	-0.447	<0.001%
chr17_732547_G_A	chr17:732547	0.248	0.029	0.293	<0.001%
chr17_714739_C_T	chr17:714739	0.090	0.157	0.435	<0.001%
chr17_714766_G_C	chr17:714766	-0.231	-0.076	-0.424	<0.001%
chr17_714858_G_C	chr17:714858	0.097	-0.188	-0.424	0.0026%
chr17_714979_C_T	chr17:714979	-0.211	-0.155	-0.424	0.117%
chr17_715759_T_C	chr17:715759	-0.235	-0.201	-0.165	<0.001%
chr17_715635_C_T	chr17:715635	-0.149	-0.145	-0.412	<0.001%
chr17_726873_G_T	chr17:726873	0.205	-0.023	0.400	<0.001%
chr17_732296_C_T	chr17:732296	0.115	0.041	0.400	<0.001%
chr17_732360_G_A	chr17:732360	-0.225	-0.011	-0.316	0.010%
chr17_732497_G_A	chr17:732497	-0.225	-0.006	-0.102	0.030%
chr17_732616_G_T	chr17:732616	0.115	0.044	0.397	—
chr17_732587_G_A	chr17:732587	0.223	0.041	0.369	<0.001%
chr17_715557_C_G	chr17:715557	0.166	-0.005	0.388	<0.001%
chr17_715859_G_A	chr17:715859	-0.220	-0.206	-0.253	<0.001%
chr17_715044_C_T	chr17:715044	0.215	0.079	0.329	0.0033%
chr17_732347_C_T	chr17:732347	0.101	0.015	0.379	<0.001%
chr17_732615_G_T	chr17:732615	0.042	0.026	0.379	—
chr17_714878_G_A	chr17:714878	0.203	-0.069	-0.376	0.0013%
chr17_715616_A_G	chr17:715616	0.184	0.104	0.376	0.0026%
chr17_732553_G_A	chr17:732553	0.211	0.028	0.354	<0.001%
chr17_731868_T_C	chr17:731868	0.141	0.014	0.371	0.0013%
chr17_732618_G_T	chr17:732618	-0.043	0.030	0.365	—
chr17_732504_G_C	chr17:732504	-0.205	-0.015	-0.168	<0.001%
chr17_732621_A_G	chr17:732621	-0.205	-0.031	-0.361	—
chr17_732574_C_A	chr17:732574	0.095	0.023	0.356	<0.001%
chr17_732195_C_A	chr17:732195	0.060	0.055	0.354	<0.001%
chr17_715533_T_C	chr17:715533	0.067	0.043	0.353	0.0026%
chr17_715626_G_C	chr17:715626	0.169	0.079	0.353	<0.001%
chr17_726656_G_T	chr17:726656	0.096	0.003	0.353	48.4%
chr17_732219_G_C	chr17:732219	-0.058	-0.048	-0.348	0.212%
chr17_714881_C_G	chr17:714881	-0.196	-0.036	-0.259	<0.001%
chr17_714924_C_T	chr17:714924	-0.196	0.046	-0.024	<0.001%
chr17_715725_T_C	chr17:715725	-0.118	-0.251	-0.347	45.4%
chr17_714555_C_A	chr17:714555	0.040	0.043	0.341	<0.001%
chr17_726828_C_G	chr17:726828	0.122	0.081	0.338	<0.001%
chr17_732622_G_A	chr17:732622	-0.018	0.033	0.338	—
chr17_732618_G_A	chr17:732618	-0.038	0.026	0.337	—
chr17_715034_A_C	chr17:715034	0.189	0.109	0.318	<0.001%
chr17_714804_C_T	chr17:714804	0.186	0.236	0.282	0.0020%
chr17_732443_C_T	chr17:732443	0.186	0.012	0.237	0.0014%
chr17_714837_G_A	chr17:714837	0.183	-0.008	0.000	0.015%
chr17_732197_C_T	chr17:732197	0.022	0.061	0.323	<0.001%
chr17_715045_C_G	chr17:715045	0.182	0.056	0.165	<0.001%
chr17_732192_C_T	chr17:732192	0.027	0.045	0.310	<0.001%
chr17_714866_A_C	chr17:714866	-0.146	-0.102	-0.306	<0.001%
chr17_714929_C_T	chr17:714929	-0.121	0.046	-0.306	0.0013%
chr17_732392_C_T	chr17:732392	0.173	0.034	0.251	0.0047%
chr17_732620_C_A	chr17:732620	-0.005	0.032	0.306	—
chr17_732338_C_A	chr17:732338	0.095	0.032	0.304	0.0027%
chr17_732471_C_G	chr17:732471	-0.171	-0.015	-0.136	0.028%
chr17_714860_C_G	chr17:714860	-0.170	-0.018	-0.118	60.0%
chr17_714522_C_T	chr17:714522	0.062	0.081	0.294	0.0026%
chr17_714526_C_T	chr17:714526	0.045	0.043	0.294	0.0053%
chr17_714959_T_C	chr17:714959	0.120	0.127	0.294	<0.001%
chr17_715584_T_C	chr17:715584	-0.085	-0.173	-0.294	0.0013%
chr17_726571_G_T	chr17:726571	-0.009	-0.080	-0.294	<0.001%
chr17_731871_C_T	chr17:731871	0.041	0.039	0.294	<0.001%
chr17_732615_G_A	chr17:732615	0.048	0.028	0.292	<0.001%
chr17_732206_C_T	chr17:732206	-0.008	0.007	0.290	<0.001%
chr17_732617_C_A	chr17:732617	-0.023	0.020	0.290	—
chr17_732490_T_C	chr17:732490	-0.163	-0.024	-0.194	<0.001%
chr17_715760_A_G	chr17:715760	-0.162	-0.198	0.018	<0.001%
chr17_732216_C_T	chr17:732216	0.045	0.061	0.283	<0.001%
chr17_732270_G_A	chr17:732270	-0.045	-0.041	-0.283	<0.001%
chr17_714506_T_C	chr17:714506	0.020	-0.036	-0.282	0.016%
chr17_714712_C_T	chr17:714712	0.050	0.084	0.282	0.0033%
chr17_714966_G_A	chr17:714966	-0.158	0.043	-0.035	<0.001%
chr17_732512_G_T	chr17:732512	0.158	0.036	0.250	<0.001%
chr17_732513_C_G	chr17:732513	-0.158	-0.026	-0.140	0.0013%
chr17_715809_A_T	chr17:715809	-0.153	-0.091	-0.165	0.0020%
chr17_732554_G_C	chr17:732554	-0.153	-0.020	-0.096	<0.001%
chr17_732485_G_A	chr17:732485	0.151	0.018	0.166	<0.001%
chr17_726985_A_T	chr17:726985	0.131	0.148	0.260	<0.001%
chr17_714540_C_T	chr17:714540	0.022	0.038	0.259	<0.001%
chr17_714824_C_G	chr17:714824	0.146	0.038	0.200	0.0026%
chr17_715313_C_A	chr17:715313	0.019	-0.020	-0.259	0.0089%
chr17_732451_G_T	chr17:732451	0.146	0.024	0.208	0.0037%
chr17_732552_C_G	chr17:732552	-0.146	-0.000	-0.053	0.0093%
chr17_732621_A_C	chr17:732621	-0.038	-0.027	-0.256	—
chr17_714775_G_A	chr17:714775	-0.143	-0.023	-0.200	<0.001%
chr17_731962_C_G	chr17:731962	0.085	0.032	0.253	0.0013%
chr17_732333_G_A	chr17:732333	0.048	0.023	0.250	0.0047%
chr17_732455_G_A	chr17:732455	-0.141	-0.013	-0.096	<0.001%
chr17_732520_G_A	chr17:732520	0.141	0.028	0.221	0.0027%
chr17_715060_G_C	chr17:715060	0.141	0.003	0.165	<0.001%
chr17_732190_G_C	chr17:732190	-0.053	-0.031	-0.248	0.0026%
chr17_726038_T_G	chr17:726038	0.010	0.008	0.247	0.032%
chr17_726090_A_G	chr17:726090	0.050	0.032	0.247	<0.001%
chr17_726571_G_A	chr17:726571	-0.012	-0.075	-0.247	<0.001%
chr17_732115_G_A	chr17:732115	-0.040	-0.027	-0.244	<0.001%
chr17_715764_T_C	chr17:715764	0.101	0.155	0.241	0.0013%
chr17_726110_C_T	chr17:726110	0.002	-0.036	-0.241	0.0035%
chr17_732250_G_A	chr17:732250	0.042	0.015	0.241	<0.001%
chr17_715626_G_A	chr17:715626	0.136	0.094	0.224	<0.001%
chr17_732026_A_G	chr17:732026	0.045	0.021	0.240	<0.001%
chr17_732185_T_C	chr17:732185	-0.033	-0.030	-0.237	<0.001%
chr17_732205_C_G	chr17:732205	0.057	0.021	0.236	<0.001%
chr17_715560_G_C	chr17:715560	0.011	0.020	0.235	<0.001%
chr17_726033_G_T	chr17:726033	0.005	0.005	-0.235	47.5%
chr17_726040_T_G	chr17:726040	0.005	-0.004	0.235	1.19%
chr17_726438_C_T	chr17:726438	-0.074	-0.037	-0.235	<0.001%
chr17_726042_T_G	chr17:726042	0.005	-0.003	0.229	0.0014%
chr17_732617_C_G	chr17:732617	-0.130	-0.007	0.000	—
chr17_715060_G_T	chr17:715060	0.129	0.015	0.094	<0.001%
chr17_714542_C_A	chr17:714542	0.027	0.053	0.224	0.0039%
chr17_714731_G_A	chr17:714731	0.126	0.043	0.153	<0.001%
chr17_714993_A_G	chr17:714993	0.047	0.084	0.224	0.307%
chr17_715055_G_A	chr17:715055	0.126	0.071	0.153	0.0013%
chr17_715687_C_G	chr17:715687	-0.101	-0.071	-0.224	<0.001%
chr17_715973_G_T	chr17:715973	0.126	0.155	0.106	<0.001%
chr17_726041_T_G	chr17:726041	0.007	-0.006	0.224	<0.001%
chr17_726043_T_G	chr17:726043	0.000	0.005	0.224	<0.001%
chr17_726435_T_C	chr17:726435	-0.048	-0.057	-0.224	7.18%
chr17_726436_G_A	chr17:726436	-0.027	-0.028	-0.224	<0.001%
chr17_732397_C_T	chr17:732397	0.126	-0.011	0.131	<0.001%
chr17_715803_G_A	chr17:715803	-0.103	-0.124	-0.218	<0.001%
chr17_714787_C_A	chr17:714787	-0.121	0.005	0.035	0.0033%
chr17_714757_C_A	chr17:714757	-0.022	-0.048	-0.212	<0.001%
chr17_714808_C_G	chr17:714808	-0.015	0.033	0.212	<0.001%
chr17_714886_G_A	chr17:714886	0.050	0.010	0.212	0.0013%
chr17_714901_G_A	chr17:714901	-0.003	-0.023	-0.212	<0.001%
chr17_715122_A_G	chr17:715122	0.002	-0.038	-0.212	<0.001%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.