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PCDH1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near PCDH1
chr5:141,753,089..141,978,410, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr5_141876085_C_G | chr5:141876085 | 19,328 | 2,064 | 12,800 | — |
| chr5_141876063_C_G | chr5:141876063 | -17,792 | -1,744 | -8,192 | — |
| chr5_141876059_C_A | chr5:141876059 | 14,272 | 2,768 | 6,144 | — |
| chr5_141876066_T_C | chr5:141876066 | -13,952 | -1,376 | -8,704 | — |
| chr5_141876075_A_C | chr5:141876075 | -13,312 | -448 | -2,944 | — |
| chr5_141876045_A_C | chr5:141876045 | 12,608 | 496 | 4,480 | — |
| chr5_141876060_G_T | chr5:141876060 | 12,608 | 1,008 | 4,992 | — |
| chr5_141876059_C_G | chr5:141876059 | -12,160 | -1,744 | -4,864 | — |
| chr5_141876050_C_A | chr5:141876050 | 11,840 | 1,728 | 7,808 | — |
| chr5_141876033_G_T | chr5:141876033 | -10,880 | -1,456 | -12,160 | — |
| chr5_141876071_G_T | chr5:141876071 | -10,880 | -880 | -9,344 | — |
| chr5_141876079_C_T | chr5:141876079 | -10,304 | -128 | -5,504 | — |
| chr5_141876062_G_C | chr5:141876062 | 9,664 | -400 | 3,072 | — |
| chr5_141876079_C_G | chr5:141876079 | -9,472 | -384 | -3,712 | — |
| chr5_141876071_G_C | chr5:141876071 | -9,280 | -560 | -4,864 | — |
| chr5_141876042_C_A | chr5:141876042 | 9,216 | -32 | -384 | — |
| chr5_141876048_G_T | chr5:141876048 | -9,216 | -576 | -6,912 | — |
| chr5_141876065_C_T | chr5:141876065 | 9,152 | 576 | 6,400 | — |
| chr5_141876075_A_T | chr5:141876075 | -9,024 | 224 | -4,992 | — |
| chr5_141876031_C_G | chr5:141876031 | -8,640 | -1,040 | -4,352 | — |
| chr5_141876033_G_C | chr5:141876033 | -8,576 | -560 | -4,480 | — |
| chr5_141876065_C_G | chr5:141876065 | 8,192 | 400 | 7,040 | — |
| chr5_141876048_G_C | chr5:141876048 | -8,128 | -32 | -3,584 | — |
| chr5_141876075_A_G | chr5:141876075 | -8,128 | -112 | -512 | — |
| chr5_141876076_C_T | chr5:141876076 | -7,936 | 256 | -5,504 | — |
| chr5_141876080_C_T | chr5:141876080 | -7,936 | 1,136 | -4,992 | — |
| chr5_141876038_A_C | chr5:141876038 | -7,872 | -1,312 | -6,400 | — |
| chr5_141876057_A_C | chr5:141876057 | -7,808 | -1,216 | -6,656 | — |
| chr5_141876080_C_A | chr5:141876080 | -7,616 | -320 | -6,272 | — |
| chr5_141876030_G_T | chr5:141876030 | 7,488 | 1,200 | 3,328 | — |
| chr5_141876076_C_G | chr5:141876076 | -7,360 | -384 | -4,224 | — |
| chr5_141876059_C_T | chr5:141876059 | -7,168 | -240 | -2,944 | — |
| chr5_141876051_T_C | chr5:141876051 | 7,040 | 1,040 | 6,016 | — |
| chr5_141876074_C_T | chr5:141876074 | 7,040 | 400 | 6,528 | — |
| chr5_141876043_G_C | chr5:141876043 | -6,848 | -896 | -3,072 | — |
| chr5_141876057_A_T | chr5:141876057 | -6,848 | -1,344 | -6,272 | — |
| chr5_141876036_C_G | chr5:141876036 | 6,784 | 320 | 2,176 | — |
| chr5_141876079_C_A | chr5:141876079 | -6,784 | -288 | -5,504 | — |
| chr5_141876055_T_G | chr5:141876055 | -6,592 | -784 | -4,608 | — |
| chr5_141852869_A_G | chr5:141852869 | -6,576 | -1,676 | -17,536 | — |
| chr5_141876031_C_A | chr5:141876031 | -6,336 | -832 | -4,096 | — |
| chr5_141876072_C_G | chr5:141876072 | 6,272 | 800 | 9,472 | — |
| chr5_141876077_A_C | chr5:141876077 | -6,272 | -16 | -3,200 | — |
| chr5_141876030_G_C | chr5:141876030 | 6,208 | 992 | 128 | — |
| chr5_141876078_C_A | chr5:141876078 | -6,144 | -112 | -4,352 | — |
| chr5_141876056_C_A | chr5:141876056 | -6,016 | -1,472 | -9,728 | — |
| chr5_141876057_A_G | chr5:141876057 | -5,952 | -1,344 | -6,400 | — |
| chr5_141876073_A_G | chr5:141876073 | -5,952 | -272 | -2,432 | — |
| chr5_141876080_C_G | chr5:141876080 | -5,760 | -112 | -3,968 | — |
| chr5_141876035_C_T | chr5:141876035 | 5,696 | 592 | 1,536 | — |
| chr5_141876056_C_G | chr5:141876056 | -5,632 | -896 | -6,144 | — |
| chr5_141876070_A_C | chr5:141876070 | -5,568 | -336 | -3,712 | — |
| chr5_141876039_G_C | chr5:141876039 | -5,376 | -784 | -4,352 | — |
| chr5_141876049_C_T | chr5:141876049 | -5,376 | -496 | -3,456 | — |
| chr5_141852878_A_G | chr5:141852878 | -5,312 | -928 | -12,736 | — |
| chr5_141876077_A_G | chr5:141876077 | 5,312 | 672 | 5,888 | — |
| chr5_141876078_C_T | chr5:141876078 | -5,312 | -352 | -5,504 | — |
| chr5_141876041_C_A | chr5:141876041 | -5,248 | -240 | -6,656 | — |
| chr5_141876034_C_T | chr5:141876034 | 5,184 | 784 | 3,840 | — |
| chr5_141876041_C_G | chr5:141876041 | -5,120 | -368 | -4,608 | — |
| chr5_141876066_T_G | chr5:141876066 | 5,120 | 0 | 5,120 | — |
| chr5_141876056_C_T | chr5:141876056 | -5,056 | -1,088 | -3,584 | — |
| chr5_141876076_C_A | chr5:141876076 | -4,992 | -256 | -4,608 | — |
| chr5_141876071_G_A | chr5:141876071 | -4,736 | 288 | -2,560 | — |
| chr5_141876035_C_A | chr5:141876035 | 4,672 | 848 | 2,304 | — |
| chr5_141876035_C_G | chr5:141876035 | 4,672 | 1,088 | 3,072 | — |
| chr5_141876046_C_T | chr5:141876046 | -4,672 | -288 | -3,968 | — |
| chr5_141876043_G_T | chr5:141876043 | -4,544 | -384 | -4,608 | — |
| chr5_141876039_G_T | chr5:141876039 | -4,544 | -720 | -2,816 | — |
| chr5_141876047_C_G | chr5:141876047 | 4,480 | 592 | 3,072 | — |
| chr5_141876036_C_A | chr5:141876036 | 4,416 | 592 | 3,200 | — |
| chr5_141876041_C_T | chr5:141876041 | -4,352 | -256 | -2,816 | — |
| chr5_141876032_A_T | chr5:141876032 | 4,160 | 928 | 3,072 | — |
| chr5_141876077_A_T | chr5:141876077 | -4,160 | -160 | -2,304 | — |
| chr5_141876064_G_C | chr5:141876064 | 4,032 | 96 | 2,304 | — |
| chr5_141852874_A_G | chr5:141852874 | -3,936 | -1,244 | -11,328 | — |
| chr5_141876052_T_A | chr5:141876052 | 3,904 | 768 | 2,560 | — |
| chr5_141876045_A_T | chr5:141876045 | 3,776 | 480 | 2,304 | — |
| chr5_141876062_G_T | chr5:141876062 | 3,712 | 224 | 512 | — |
| chr5_141876067_C_T | chr5:141876067 | -3,712 | -448 | -1,920 | — |
| chr5_141876069_C_A | chr5:141876069 | -3,712 | -432 | -2,944 | — |
| chr5_141852873_C_G | chr5:141852873 | -3,696 | -1,052 | -10,944 | — |
| chr5_141876039_G_A | chr5:141876039 | -3,584 | -560 | -3,840 | — |
| chr5_141876073_A_T | chr5:141876073 | -3,584 | 16 | -2,304 | — |
| chr5_141876029_A_C | chr5:141876029 | -3,520 | -80 | 512 | — |
| chr5_141876081_A_C | chr5:141876081 | -3,520 | -128 | -1,152 | — |
| chr5_141876034_C_G | chr5:141876034 | 3,456 | 864 | 3,456 | — |
| chr5_141876048_G_A | chr5:141876048 | -3,328 | 448 | -3,840 | — |
| chr5_141852855_G_T | chr5:141852855 | 3,232 | 772 | 6,624 | — |
| chr5_141876054_G_C | chr5:141876054 | -3,200 | -992 | -1,792 | — |
| chr5_141876084_G_C | chr5:141876084 | 3,200 | 384 | 3,072 | — |
| chr5_141852858_T_G | chr5:141852858 | -3,136 | -940 | -8,608 | — |
| chr5_141876051_T_A | chr5:141876051 | -3,136 | -752 | -896 | — |
| chr5_141876060_G_C | chr5:141876060 | 3,136 | -672 | -256 | — |
| chr5_141876040_T_G | chr5:141876040 | -3,072 | -272 | -1,792 | — |
| chr5_141876078_C_G | chr5:141876078 | -3,072 | -160 | -1,792 | — |
| chr5_141852857_C_G | chr5:141852857 | -3,040 | -852 | -9,120 | — |
| chr5_141876084_G_T | chr5:141876084 | 3,008 | 592 | 3,840 | — |
| chr5_141852867_A_G | chr5:141852867 | -2,880 | -1,108 | -9,184 | — |
| chr5_141876064_G_A | chr5:141876064 | 2,880 | 1,088 | 4,352 | — |
| chr5_141876038_A_T | chr5:141876038 | -2,816 | -208 | -1,408 | — |
| chr5_141876042_C_G | chr5:141876042 | 2,752 | 704 | 2,816 | — |
| chr5_141876069_C_G | chr5:141876069 | -2,752 | -240 | -1,792 | — |
| chr5_141876038_A_G | chr5:141876038 | -2,688 | -240 | -1,664 | — |
| chr5_141876049_C_G | chr5:141876049 | 2,688 | 384 | 384 | — |
| chr5_141876085_C_A | chr5:141876085 | 2,688 | 384 | 1,280 | — |
| chr5_141876081_A_G | chr5:141876081 | -2,624 | -352 | -3,456 | — |
| chr5_141876060_G_A | chr5:141876060 | 2,624 | -80 | 256 | — |
| chr5_141852861_G_T | chr5:141852861 | 2,560 | 860 | 7,552 | — |
| chr5_141876040_T_C | chr5:141876040 | -2,560 | -336 | -1,536 | — |
| chr5_141876049_C_A | chr5:141876049 | -2,560 | 144 | -2,048 | — |
| chr5_141876054_G_A | chr5:141876054 | -2,496 | -704 | -2,816 | — |
| chr5_141852861_G_C | chr5:141852861 | 2,432 | 708 | 8,192 | — |
| chr5_141852861_G_A | chr5:141852861 | 2,432 | 852 | 7,296 | — |
| chr5_141876062_G_A | chr5:141876062 | 2,432 | -128 | -768 | — |
| chr5_141876047_C_A | chr5:141876047 | 2,368 | 368 | 1,792 | — |
| chr5_141876051_T_G | chr5:141876051 | -2,368 | -240 | 0 | — |
| chr5_141876083_C_G | chr5:141876083 | -2,368 | 288 | 256 | — |
| chr5_141852853_G_C | chr5:141852853 | 2,352 | 660 | 7,936 | — |
| chr5_141876070_A_G | chr5:141876070 | -2,304 | 144 | 640 | — |
| chr5_141852885_A_G | chr5:141852885 | -2,224 | -640 | -5,792 | — |
| chr5_141852852_A_G | chr5:141852852 | -2,224 | -736 | -4,896 | — |
| chr5_141852880_G_C | chr5:141852880 | 2,176 | 644 | 9,408 | — |
| chr5_141876058_G_C | chr5:141876058 | -2,176 | -432 | -2,816 | — |
| chr5_141852881_G_T | chr5:141852881 | 2,160 | 644 | 7,872 | — |
| chr5_141852879_G_C | chr5:141852879 | 2,112 | 492 | 7,424 | — |
| chr5_141852880_G_A | chr5:141852880 | 2,064 | 756 | 7,872 | — |
| chr5_141852853_G_T | chr5:141852853 | 2,064 | 664 | 6,560 | — |
| chr5_141852881_G_C | chr5:141852881 | 2,048 | 576 | 8,512 | — |
| chr5_141852879_G_T | chr5:141852879 | 2,048 | 544 | 6,880 | — |
| chr5_141852855_G_C | chr5:141852855 | 2,048 | 500 | 5,504 | — |
| chr5_141852860_G_C | chr5:141852860 | 2,016 | 580 | 7,072 | — |
| chr5_141852853_G_A | chr5:141852853 | 1,968 | 672 | 6,144 | — |
| chr5_141852881_G_A | chr5:141852881 | 1,952 | 672 | 7,616 | — |
| chr5_141852877_G_A | chr5:141852877 | 1,952 | 728 | 6,816 | — |
| chr5_141852798_A_C | chr5:141852798 | -1,888 | 92 | -3,648 | — |
| chr5_141852851_C_G | chr5:141852851 | -1,856 | -568 | -5,408 | — |
| chr5_141876058_G_T | chr5:141876058 | -1,856 | -320 | -2,560 | — |
| chr5_141852860_G_A | chr5:141852860 | 1,840 | 648 | 6,080 | — |
| chr5_141852855_G_A | chr5:141852855 | 1,840 | 568 | 4,864 | — |
| chr5_141852854_G_T | chr5:141852854 | 1,824 | 572 | 5,504 | — |
| chr5_141852854_G_C | chr5:141852854 | 1,792 | 476 | 6,560 | — |
| chr5_141852880_G_T | chr5:141852880 | 1,712 | 740 | 8,256 | — |
| chr5_141852860_G_T | chr5:141852860 | 1,696 | 624 | 6,208 | — |
| chr5_141852854_G_A | chr5:141852854 | 1,680 | 580 | 5,248 | — |
| chr5_141852862_G_C | chr5:141852862 | 1,664 | 548 | 6,816 | — |
| chr5_141852875_G_C | chr5:141852875 | 1,664 | 408 | 4,992 | — |
| chr5_141876067_C_G | chr5:141876067 | 1,664 | 560 | 3,968 | — |
| chr5_141852876_G_C | chr5:141852876 | 1,616 | 412 | 5,792 | — |
| chr5_141852862_G_T | chr5:141852862 | 1,584 | 612 | 5,536 | — |
| chr5_141852876_G_A | chr5:141852876 | 1,552 | 484 | 3,968 | — |
| chr5_141852856_G_T | chr5:141852856 | 1,520 | 524 | 5,024 | — |
| chr5_141852856_G_C | chr5:141852856 | 1,504 | 576 | 6,528 | — |
| chr5_141852794_T_C | chr5:141852794 | -1,504 | 48 | -3,904 | — |
| chr5_141852856_G_A | chr5:141852856 | 1,488 | 652 | 5,504 | — |
| chr5_141852875_G_T | chr5:141852875 | 1,488 | 376 | 3,712 | — |
| chr5_141852879_G_A | chr5:141852879 | 1,472 | 524 | 6,432 | — |
| chr5_141876074_C_A | chr5:141876074 | -1,472 | 48 | -2,560 | — |
| chr5_141852862_G_A | chr5:141852862 | 1,456 | 608 | 5,440 | — |
| chr5_141852877_G_C | chr5:141852877 | 1,360 | 388 | 4,512 | — |
| chr5_141876058_G_A | chr5:141876058 | 1,344 | 352 | -2,304 | — |
| chr5_141852871_G_T | chr5:141852871 | 1,296 | 452 | 3,776 | — |
| chr5_141852872_G_C | chr5:141852872 | 1,280 | 408 | 3,680 | — |
| chr5_141852875_G_A | chr5:141852875 | 1,280 | 396 | 3,328 | — |
| chr5_141852882_G_T | chr5:141852882 | 1,264 | 500 | 5,280 | — |
| chr5_141852882_G_C | chr5:141852882 | 1,248 | 400 | 6,528 | — |
| chr5_141852871_G_A | chr5:141852871 | 1,248 | 356 | 2,912 | — |
| chr5_141852864_T_G | chr5:141852864 | -1,232 | -328 | -4,064 | — |
| chr5_141852876_G_T | chr5:141852876 | 1,232 | 396 | 4,064 | — |
| chr5_141852883_G_T | chr5:141852883 | 1,232 | 364 | 2,976 | — |
| chr5_141852883_G_C | chr5:141852883 | 1,200 | 280 | 3,456 | — |
| chr5_141852871_G_C | chr5:141852871 | 1,136 | 376 | 4,416 | — |
| chr5_141852883_G_A | chr5:141852883 | 1,136 | 316 | 3,872 | — |
| chr5_141852837_C_G | chr5:141852837 | -1,120 | -276 | -3,136 | — |
| chr5_141852859_G_A | chr5:141852859 | 1,072 | 380 | 3,456 | — |
| chr5_141852857_C_A | chr5:141852857 | 1,040 | 476 | 3,104 | — |
| chr5_141852872_G_A | chr5:141852872 | 1,024 | 412 | 2,816 | — |
| chr5_141852863_G_C | chr5:141852863 | 960 | 280 | 3,200 | — |
| chr5_141852863_G_T | chr5:141852863 | 960 | 392 | 3,200 | — |
| chr5_141852882_G_A | chr5:141852882 | 912 | 480 | 5,120 | — |
| chr5_141852863_G_A | chr5:141852863 | 912 | 460 | 3,808 | — |
| chr5_141852884_C_G | chr5:141852884 | -912 | -224 | -3,328 | — |
| chr5_141852870_G_A | chr5:141852870 | 912 | 376 | 2,944 | — |
| chr5_141852870_G_C | chr5:141852870 | 880 | 264 | 3,072 | — |
| chr5_141852859_G_T | chr5:141852859 | 848 | 376 | 3,296 | — |
| chr5_141852794_T_A | chr5:141852794 | -832 | -280 | -3,072 | — |
| chr5_141852859_G_C | chr5:141852859 | 784 | 256 | 2,528 | — |
| chr5_141852878_A_T | chr5:141852878 | -768 | -352 | -2,816 | — |
| chr5_141852874_A_T | chr5:141852874 | -672 | -336 | -3,072 | — |
| chr5_141852891_C_G | chr5:141852891 | -672 | -224 | -2,560 | — |
| chr5_141852795_C_G | chr5:141852795 | 544 | 232 | 2,944 | — |
| chr5_141852796_C_G | chr5:141852796 | 480 | 48 | 3,136 | — |
| chr5_141876084_G_A | chr5:141876084 | 448 | 656 | 2,688 | — |
| chr5_141876054_G_T | chr5:141876054 | -384 | -928 | -2,816 | — |
| chr5_141852815_C_T | chr5:141852815 | -384 | -80 | -2,496 | — |
| chr5_141876053_G_T | chr5:141876053 | -320 | -1,552 | -4,224 | — |
| chr5_141852800_C_G | chr5:141852800 | -320 | 60 | 2,432 | — |
| chr5_141876055_T_A | chr5:141876055 | 192 | -896 | -4,736 | — |
| chr5_141852802_C_G | chr5:141852802 | 64 | 216 | 2,752 | — |
| chr5_141876061_G_C | chr5:141876061 | 0 | -304 | -2,560 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.