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PDE6B

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near PDE6B

chr4:525,572..770,782, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr4_577660_G_T	chr4:577660	-0.077	-0.032	-1.000	0.0059%
chr4_577664_C_T	chr4:577664	-0.122	-0.084	-1.000	0.0026%
chr4_577663_T_A	chr4:577663	-0.126	-0.082	-1.000	<0.001%
chr4_577662_C_T	chr4:577662	-0.092	-0.057	-1.000	<0.001%
chr4_577664_C_A	chr4:577664	-0.100	-0.084	-1.000	<0.001%
chr4_577658_A_G	chr4:577658	-0.068	-0.039	-0.747	0.0039%
chr4_577473_G_T	chr4:577473	0.060	0.156	0.671	0.0026%
chr4_577677_A_G	chr4:577677	0.161	0.069	0.624	0.841%
chr4_577456_G_C	chr4:577456	0.042	0.123	0.600	<0.001%
chr4_577577_G_A	chr4:577577	-0.053	-0.013	-0.465	0.0013%
chr4_577469_G_C	chr4:577469	0.034	0.074	0.394	0.0013%
chr4_577553_G_A	chr4:577553	-0.060	-0.019	-0.388	0.0013%
chr4_577572_G_A	chr4:577572	-0.030	-0.016	-0.376	0.011%
chr4_577553_G_T	chr4:577553	-0.050	-0.018	-0.371	<0.001%
chr4_577685_C_T	chr4:577685	0.033	0.005	0.365	<0.001%
chr4_579081_C_G	chr4:579081	0.078	0.096	0.365	<0.001%
chr4_582086_A_G	chr4:582086	-0.072	-0.091	-0.356	<0.001%
chr4_577448_A_G	chr4:577448	-0.034	-0.081	-0.353	<0.001%
chr4_577561_G_A	chr4:577561	-0.055	-0.033	-0.353	0.023%
chr4_577646_G_A	chr4:577646	-0.006	0.015	-0.353	<0.001%
chr4_577572_G_T	chr4:577572	-0.033	-0.013	-0.335	0.0039%
chr4_578928_T_C	chr4:578928	-0.022	-0.135	-0.335	0.0039%
chr4_577474_G_A	chr4:577474	0.000	0.102	0.329	<0.001%
chr4_577495_G_C	chr4:577495	0.022	0.053	0.329	<0.001%
chr4_577709_C_A	chr4:577709	-0.046	-0.003	0.318	0.0046%
chr4_577623_C_T	chr4:577623	0.004	0.013	0.306	<0.001%
chr4_577468_C_T	chr4:577468	0.024	0.071	0.300	0.0039%
chr4_577701_G_A	chr4:577701	0.007	0.051	0.288	<0.001%
chr4_577572_G_C	chr4:577572	-0.016	-0.005	-0.271	<0.001%
chr4_577631_C_T	chr4:577631	0.002	-0.032	-0.271	<0.001%
chr4_581651_C_T	chr4:581651	-0.080	-0.094	-0.262	<0.001%
chr4_577755_G_T	chr4:577755	0.017	0.006	-0.247	<0.001%
chr4_532869_C_G	chr4:532869	-0.014	-0.052	-0.244	0.013%
chr4_582026_G_C	chr4:582026	-0.034	-0.160	-0.244	<0.001%
chr4_577562_G_A	chr4:577562	-0.049	-0.018	-0.241	0.0026%
chr4_577669_T_A	chr4:577669	-0.020	-0.016	-0.241	<0.001%
chr4_577702_C_A	chr4:577702	-0.027	0.006	-0.235	<0.001%
chr4_577774_C_T	chr4:577774	0.011	0.006	-0.229	<0.001%
chr4_577514_G_T	chr4:577514	0.001	-0.006	-0.224	<0.001%
chr4_577607_C_T	chr4:577607	0.038	0.025	0.224	<0.001%
chr4_577809_C_T	chr4:577809	-0.052	0.001	-0.224	0.0059%
chr4_578921_G_C	chr4:578921	-0.022	-0.062	-0.224	<0.001%
chr4_577570_C_G	chr4:577570	-0.004	-0.009	-0.218	<0.001%
chr4_581688_C_T	chr4:581688	0.043	0.020	0.218	<0.001%
chr4_577479_G_A	chr4:577479	0.027	0.072	0.206	<0.001%
chr4_577721_C_T	chr4:577721	-0.012	-0.008	-0.206	<0.001%
chr4_577579_C_A	chr4:577579	0.038	0.061	0.200	<0.001%
chr4_577741_C_T	chr4:577741	-0.022	-0.014	-0.194	<0.001%
chr4_577779_G_A	chr4:577779	-0.013	0.005	-0.194	0.0013%
chr4_577651_G_A	chr4:577651	0.012	0.001	0.188	0.0026%
chr4_577747_G_T	chr4:577747	0.032	0.019	-0.188	<0.001%
chr4_577574_A_G	chr4:577574	-0.010	-0.004	-0.182	0.0059%
chr4_577627_T_C	chr4:577627	0.004	-0.004	0.182	<0.001%
chr4_532897_A_G	chr4:532897	-0.019	-0.058	-0.176	0.0020%
chr4_532919_G_A	chr4:532919	-0.027	0.004	0.176	<0.001%
chr4_533048_G_A	chr4:533048	0.017	0.016	0.176	<0.001%
chr4_532918_A_G	chr4:532918	-0.006	-0.047	-0.171	<0.001%
chr4_577485_T_C	chr4:577485	-0.024	-0.013	-0.171	<0.001%
chr4_577799_C_G	chr4:577799	-0.066	-0.029	-0.171	<0.001%
chr4_577851_A_C	chr4:577851	0.025	0.020	0.159	<0.001%
chr4_581686_C_T	chr4:581686	0.037	0.030	0.156	0.0013%
chr4_577781_C_A	chr4:577781	0.031	0.011	0.153	0.014%
chr4_570184_G_A	chr4:570184	-0.009	0.024	-0.147	0.0053%
chr4_577771_G_A	chr4:577771	-0.011	0.032	0.147	<0.001%
chr4_577812_G_T	chr4:577812	-0.047	0.004	-0.147	0.0013%
chr4_582031_C_T	chr4:582031	-0.041	-0.099	-0.147	<0.001%
chr4_577480_G_C	chr4:577480	0.002	0.037	0.141	<0.001%
chr4_577634_C_T	chr4:577634	-0.005	-0.006	-0.141	0.0039%
chr4_581687_C_A	chr4:581687	0.033	0.041	0.141	0.0092%
chr4_582137_T_C	chr4:582137	0.077	0.150	0.141	<0.001%
chr4_560887_G_T	chr4:560887	-0.079	0.065	0.094	<0.001%
chr4_581690_C_G	chr4:581690	0.021	-0.013	0.138	0.0013%
chr4_532923_G_T	chr4:532923	0.021	0.016	0.129	<0.001%
chr4_577599_C_T	chr4:577599	-0.017	0.020	-0.129	<0.001%
chr4_577835_C_T	chr4:577835	0.012	0.006	0.129	0.0013%
chr4_577850_G_T	chr4:577850	-0.015	-0.003	0.129	0.0079%
chr4_579127_C_T	chr4:579127	-0.065	-0.038	-0.129	0.0020%
chr4_581984_T_C	chr4:581984	0.038	0.061	0.126	0.0013%
chr4_570183_C_T	chr4:570183	-0.002	0.009	-0.124	<0.001%
chr4_577582_C_T	chr4:577582	0.012	0.024	0.124	0.0013%
chr4_577589_G_T	chr4:577589	0.006	0.018	-0.124	<0.001%
chr4_577726_A_T	chr4:577726	0.006	-0.005	-0.124	<0.001%
chr4_532974_A_G	chr4:532974	-0.009	-0.034	-0.118	<0.001%
chr4_532981_A_G	chr4:532981	-0.007	-0.032	-0.118	<0.001%
chr4_533044_A_T	chr4:533044	0.005	-0.008	0.118	<0.001%
chr4_582034_T_A	chr4:582034	-0.007	-0.061	-0.118	0.060%
chr4_582144_T_C	chr4:582144	0.064	0.107	0.088	0.0039%
chr4_532916_A_G	chr4:532916	-0.007	-0.028	-0.112	0.030%
chr4_532926_C_T	chr4:532926	-0.018	-0.009	-0.112	<0.001%
chr4_533006_A_G	chr4:533006	-0.007	-0.001	-0.112	0.0030%
chr4_560792_G_T	chr4:560792	0.059	-0.003	-0.112	<0.001%
chr4_570223_A_T	chr4:570223	0.000	0.025	0.112	<0.001%
chr4_577607_C_G	chr4:577607	0.011	-0.019	-0.112	0.0046%
chr4_577700_C_A	chr4:577700	-0.007	0.016	0.112	<0.001%
chr4_560924_A_G	chr4:560924	-0.063	-0.027	0.006	0.0013%
chr4_532898_G_A	chr4:532898	-0.038	0.003	-0.106	<0.001%
chr4_577515_C_T	chr4:577515	0.007	0.000	-0.106	<0.001%
chr4_577529_G_A	chr4:577529	0.003	0.001	-0.106	0.0033%
chr4_577592_G_A	chr4:577592	-0.001	-0.001	-0.106	0.0020%
chr4_578991_G_T	chr4:578991	-0.016	-0.015	-0.106	0.0020%
chr4_581919_A_G	chr4:581919	0.040	0.069	0.106	0.0013%
chr4_581962_C_A	chr4:581962	0.010	-0.084	-0.106	<0.001%
chr4_581946_G_T	chr4:581946	-0.016	-0.071	-0.103	<0.001%
chr4_532879_C_T	chr4:532879	-0.002	-0.004	-0.100	<0.001%
chr4_532924_G_T	chr4:532924	0.019	0.018	0.100	<0.001%
chr4_577502_C_T	chr4:577502	-0.013	-0.025	-0.100	0.0013%
chr4_577550_T_C	chr4:577550	0.005	0.004	0.100	0.0026%
chr4_577638_G_A	chr4:577638	0.004	0.030	0.100	<0.001%
chr4_602511_G_T	chr4:602511	-0.010	-0.004	-0.100	0.0026%
chr4_560792_G_A	chr4:560792	0.056	0.000	-0.088	0.0013%
chr4_560794_G_A	chr4:560794	0.055	0.003	-0.041	0.0053%
chr4_581878_A_G	chr4:581878	0.000	-0.008	0.097	0.0026%
chr4_532986_G_T	chr4:532986	0.016	0.003	0.094	<0.001%
chr4_570183_C_G	chr4:570183	-0.012	-0.020	-0.094	<0.001%
chr4_560765_C_A	chr4:560765	-0.052	-0.013	-0.038	0.043%
chr4_560890_G_A	chr4:560890	-0.051	0.041	0.000	0.0020%
chr4_560891_G_T	chr4:560891	0.025	0.032	0.088	<0.001%
chr4_577870_T_C	chr4:577870	0.019	-0.009	0.088	0.0013%
chr4_579048_C_T	chr4:579048	0.018	0.033	0.088	<0.001%
chr4_581879_T_G	chr4:581879	-0.047	-0.056	-0.038	<0.001%
chr4_582158_T_C	chr4:582158	-0.047	-0.070	-0.037	<0.001%
chr4_579121_G_C	chr4:579121	0.047	0.016	0.071	0.012%
chr4_581816_C_T	chr4:581816	-0.012	-0.020	-0.082	0.0026%
chr4_581925_T_C	chr4:581925	-0.035	-0.103	-0.082	<0.001%
chr4_582054_G_T	chr4:582054	-0.017	-0.103	-0.082	0.0013%
chr4_582181_G_A	chr4:582181	-0.008	-0.011	-0.081	<0.001%
chr4_560991_G_A	chr4:560991	0.000	0.001	-0.079	0.020%
chr4_581638_C_T	chr4:581638	-0.007	0.000	-0.079	<0.001%
chr4_581683_A_G	chr4:581683	0.016	0.010	0.079	0.0013%
chr4_581709_C_T	chr4:581709	-0.028	-0.018	-0.079	0.011%
chr4_581923_G_A	chr4:581923	-0.010	-0.033	-0.079	0.0099%
chr4_581983_A_G	chr4:581983	0.042	0.071	0.079	<0.001%
chr4_532953_A_G	chr4:532953	-0.004	-0.015	-0.076	<0.001%
chr4_560798_C_A	chr4:560798	0.017	0.020	-0.076	<0.001%
chr4_570072_G_A	chr4:570072	0.017	0.019	0.076	0.0020%
chr4_570111_C_G	chr4:570111	-0.002	0.006	0.076	<0.001%
chr4_570178_C_T	chr4:570178	0.030	-0.018	0.076	2.40%
chr4_577635_G_C	chr4:577635	0.012	0.015	-0.076	<0.001%
chr4_577761_C_T	chr4:577761	0.017	0.008	-0.076	0.0013%
chr4_578833_G_T	chr4:578833	0.013	0.001	-0.076	<0.001%
chr4_581910_T_C	chr4:581910	-0.042	-0.051	-0.076	<0.001%
chr4_582158_T_G	chr4:582158	0.017	0.114	0.075	0.0020%
chr4_581969_G_T	chr4:581969	0.041	0.023	-0.012	0.0020%
chr4_533031_T_G	chr4:533031	0.004	0.005	0.071	0.0014%
chr4_570250_C_T	chr4:570250	-0.002	0.005	-0.071	0.731%
chr4_577638_G_T	chr4:577638	0.007	0.009	0.071	<0.001%
chr4_577698_T_C	chr4:577698	0.029	0.003	0.071	0.0039%
chr4_577854_G_A	chr4:577854	0.014	0.009	-0.071	0.014%
chr4_581773_A_G	chr4:581773	0.002	0.010	0.071	0.0013%
chr4_560810_T_C	chr4:560810	-0.039	0.001	0.003	<0.001%
chr4_577688_T_G	chr4:577688	0.039	0.009	-0.065	0.0013%
chr4_577768_A_G	chr4:577768	-0.039	-0.036	0.012	0.0026%
chr4_560807_G_T	chr4:560807	0.013	0.003	-0.068	0.0013%
chr4_560861_G_A	chr4:560861	0.034	0.046	0.068	0.0013%
chr4_560862_G_A	chr4:560862	0.023	0.043	0.068	<0.001%
chr4_581914_C_T	chr4:581914	-0.018	-0.028	-0.068	<0.001%
chr4_532945_G_A	chr4:532945	-0.007	0.006	-0.065	<0.001%
chr4_569980_A_G	chr4:569980	0.001	0.000	0.065	<0.001%
chr4_569993_C_A	chr4:569993	0.007	-0.003	-0.065	<0.001%
chr4_570197_C_T	chr4:570197	0.003	-0.009	-0.065	<0.001%
chr4_570224_T_G	chr4:570224	0.008	0.004	0.065	<0.001%
chr4_577490_T_C	chr4:577490	0.000	0.010	0.065	<0.001%
chr4_577498_C_T	chr4:577498	0.004	0.005	-0.065	<0.001%
chr4_577528_G_A	chr4:577528	-0.001	0.005	-0.065	0.0013%
chr4_577544_C_A	chr4:577544	0.017	0.010	0.065	<0.001%
chr4_577546_T_G	chr4:577546	0.034	-0.006	0.065	<0.001%
chr4_577595_G_A	chr4:577595	0.013	-0.006	-0.065	<0.001%
chr4_581582_G_C	chr4:581582	-0.002	-0.015	-0.065	0.0013%
chr4_581862_G_A	chr4:581862	-0.008	-0.025	-0.065	0.053%
chr4_582159_G_A	chr4:582159	-0.003	0.025	-0.063	0.0013%
chr4_560956_G_A	chr4:560956	0.035	-0.010	0.006	<0.001%
chr4_560999_A_T	chr4:560999	-0.002	-0.003	-0.062	<0.001%
chr4_581772_T_C	chr4:581772	0.002	0.001	0.062	0.020%
chr4_581838_C_A	chr4:581838	-0.029	-0.015	-0.062	<0.001%
chr4_532837_A_G	chr4:532837	-0.014	-0.023	-0.059	0.0033%
chr4_532932_A_G	chr4:532932	-0.001	-0.018	-0.059	0.0073%
chr4_532966_G_A	chr4:532966	0.009	0.016	0.059	<0.001%
chr4_560909_G_A	chr4:560909	-0.012	0.001	-0.059	<0.001%
chr4_570010_G_C	chr4:570010	-0.012	-0.024	-0.059	0.0020%
chr4_570072_G_C	chr4:570072	0.000	-0.009	-0.059	0.0020%
chr4_570132_G_A	chr4:570132	0.003	-0.005	-0.059	<0.001%
chr4_570238_C_T	chr4:570238	0.002	0.008	-0.059	0.0053%
chr4_577518_C_T	chr4:577518	-0.006	0.001	-0.059	<0.001%
chr4_577798_G_A	chr4:577798	0.020	0.000	0.059	<0.001%
chr4_577830_G_A	chr4:577830	0.000	0.006	-0.059	0.0013%
chr4_577860_G_T	chr4:577860	0.008	0.000	-0.059	<0.001%
chr4_577869_G_A	chr4:577869	-0.003	-0.001	-0.059	<0.001%
chr4_581971_T_C	chr4:581971	0.022	0.008	0.059	0.028%
chr4_560814_A_C	chr4:560814	0.032	0.013	0.032	<0.001%
chr4_570042_C_T	chr4:570042	0.002	-0.005	-0.056	0.0013%
chr4_581661_G_A	chr4:581661	-0.011	-0.003	-0.056	0.0020%
chr4_581771_G_T	chr4:581771	-0.008	-0.013	-0.056	0.0013%
chr4_581786_T_C	chr4:581786	0.007	-0.009	0.056	0.0020%
chr4_581866_C_A	chr4:581866	0.000	-0.005	-0.056	<0.001%
chr4_532887_G_A	chr4:532887	0.007	0.019	0.053	0.0013%
chr4_533056_C_T	chr4:533056	0.012	0.019	-0.053	0.015%
chr4_533065_G_T	chr4:533065	0.005	0.008	-0.053	<0.001%
chr4_560866_G_A	chr4:560866	-0.006	0.019	0.053	<0.001%
chr4_570334_G_T	chr4:570334	0.005	0.005	-0.053	<0.001%
chr4_570356_G_T	chr4:570356	0.003	-0.003	-0.053	<0.001%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.