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PHRF1

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near PHRF1

chr11:476,469..712,222, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr11_506418_T_A	chr11:506418	-0.215	-0.485	-1.000	0.020%
chr11_506969_C_T	chr11:506969	0.446	0.670	1.000	0.0020%
chr11_506962_C_T	chr11:506962	0.153	0.325	1.000	<0.001%
chr11_506415_A_G	chr11:506415	-0.125	-0.459	-1.000	<0.001%
chr11_507471_G_T	chr11:507471	0.215	0.142	1.000	0.0020%
chr11_506957_C_A	chr11:506957	0.336	0.386	1.000	0.0013%
chr11_507339_G_A	chr11:507339	0.303	0.154	1.000	<0.001%
chr11_507476_G_A	chr11:507476	0.378	0.170	1.000	<0.001%
chr11_518704_G_A	chr11:518704	-0.598	-0.198	-0.494	<0.001%
chr11_518641_T_C	chr11:518641	0.572	0.282	0.612	0.0020%
chr11_507471_G_C	chr11:507471	0.231	0.119	0.982	<0.001%
chr11_518800_C_T	chr11:518800	-0.220	0.016	0.976	<0.001%
chr11_507305_G_C	chr11:507305	0.210	0.256	0.947	<0.001%
chr11_507434_G_A	chr11:507434	0.062	0.165	0.941	0.0042%
chr11_507475_G_A	chr11:507475	0.270	0.165	0.924	0.092%
chr11_507293_G_T	chr11:507293	0.253	0.236	0.912	<0.001%
chr11_507288_G_A	chr11:507288	0.256	0.263	0.900	<0.001%
chr11_518746_A_T	chr11:518746	0.493	0.187	0.400	<0.001%
chr11_518705_T_G	chr11:518705	-0.408	-0.028	-0.812	0.0013%
chr11_507338_G_C	chr11:507338	-0.040	0.034	0.776	<0.001%
chr11_518511_T_C	chr11:518511	0.439	0.363	0.765	0.0020%
chr11_506958_C_A	chr11:506958	0.180	0.190	0.765	<0.001%
chr11_507476_G_C	chr11:507476	0.308	0.109	0.741	<0.001%
chr11_506950_C_A	chr11:506950	0.153	0.211	0.729	0.0020%
chr11_507275_G_T	chr11:507275	0.140	0.217	0.718	<0.001%
chr11_506404_G_A	chr11:506404	-0.215	-0.282	-0.706	0.0013%
chr11_507477_G_C	chr11:507477	0.266	0.123	0.706	<0.001%
chr11_507469_G_A	chr11:507469	0.251	0.147	0.694	0.0020%
chr11_506397_G_A	chr11:506397	-0.093	-0.155	-0.682	<0.001%
chr11_518605_G_A	chr11:518605	0.376	-0.025	0.318	0.0013%
chr11_506956_C_A	chr11:506956	0.200	0.216	0.659	<0.001%
chr11_518709_G_C	chr11:518709	-0.371	-0.048	-0.235	<0.001%
chr11_507318_C_G	chr11:507318	-0.130	-0.133	-0.653	0.0036%
chr11_506958_C_G	chr11:506958	0.329	0.155	0.647	<0.001%
chr11_518875_T_G	chr11:518875	-0.366	-0.044	-0.388	0.013%
chr11_518623_G_A	chr11:518623	0.363	0.117	0.612	<0.001%
chr11_506354_C_G	chr11:506354	0.361	0.216	0.365	<0.001%
chr11_506949_C_T	chr11:506949	0.116	0.173	0.624	<0.001%
chr11_507113_C_T	chr11:507113	-0.349	-0.093	-0.176	0.011%
chr11_506793_A_C	chr11:506793	0.150	-0.043	-0.612	0.0026%
chr11_506896_A_C	chr11:506896	0.063	-0.168	-0.612	<0.001%
chr11_518636_A_G	chr11:518636	0.128	0.222	0.612	<0.001%
chr11_506792_C_T	chr11:506792	0.183	-0.020	-0.588	<0.001%
chr11_506949_C_G	chr11:506949	0.196	0.193	0.565	0.0039%
chr11_518688_G_C	chr11:518688	0.319	0.082	-0.082	0.018%
chr11_518880_C_A	chr11:518880	-0.319	-0.011	-0.071	0.0047%
chr11_506968_C_G	chr11:506968	0.043	0.201	0.553	0.0020%
chr11_518549_T_A	chr11:518549	0.219	0.140	0.553	0.047%
chr11_518796_C_T	chr11:518796	0.087	-0.030	0.553	0.0020%
chr11_506976_G_A	chr11:506976	-0.309	-0.203	-0.235	0.0060%
chr11_507454_G_A	chr11:507454	-0.058	0.079	0.541	<0.001%
chr11_507501_G_A	chr11:507501	0.055	0.112	0.541	0.0026%
chr11_518803_C_T	chr11:518803	-0.306	-0.052	-0.176	<0.001%
chr11_507458_G_A	chr11:507458	0.123	0.096	0.535	0.0020%
chr11_506923_G_A	chr11:506923	0.050	0.155	0.529	0.0046%
chr11_506962_C_G	chr11:506962	0.020	0.117	0.529	<0.001%
chr11_518862_G_T	chr11:518862	0.296	0.075	0.376	0.128%
chr11_507333_G_T	chr11:507333	0.115	0.105	0.518	0.0013%
chr11_506906_G_T	chr11:506906	-0.017	0.122	0.494	0.0020%
chr11_506936_C_T	chr11:506936	0.097	0.122	0.494	<0.001%
chr11_518800_C_G	chr11:518800	-0.210	-0.122	0.494	<0.001%
chr11_507439_G_C	chr11:507439	0.030	0.098	0.488	0.0057%
chr11_507527_G_T	chr11:507527	-0.028	-0.051	-0.488	<0.001%
chr11_518872_C_T	chr11:518872	-0.270	0.009	-0.082	<0.001%
chr11_518776_G_T	chr11:518776	0.067	0.095	0.471	0.0020%
chr11_507273_G_A	chr11:507273	0.113	0.113	0.465	0.743%
chr11_506373_G_A	chr11:506373	-0.072	-0.147	-0.459	<0.001%
chr11_518767_G_T	chr11:518767	0.030	0.098	0.459	0.0013%
chr11_506394_C_T	chr11:506394	-0.105	-0.114	-0.447	0.0020%
chr11_506797_G_A	chr11:506797	0.233	0.051	-0.447	<0.001%
chr11_507337_G_C	chr11:507337	0.060	0.072	0.441	0.0013%
chr11_506877_G_A	chr11:506877	0.206	-0.198	-0.435	0.0033%
chr11_518769_C_G	chr11:518769	-0.243	0.013	-0.059	0.0013%
chr11_507256_G_A	chr11:507256	-0.140	0.058	0.424	<0.001%
chr11_518621_C_T	chr11:518621	0.236	0.094	0.365	<0.001%
chr11_506880_G_A	chr11:506880	-0.077	-0.183	-0.412	0.851%
chr11_507152_A_C	chr11:507152	-0.226	-0.132	-0.176	0.0020%
chr11_518799_C_A	chr11:518799	-0.226	-0.089	0.200	0.0013%
chr11_518790_G_T	chr11:518790	0.223	0.090	0.188	0.0013%
chr11_507353_G_T	chr11:507353	0.055	0.038	0.388	<0.001%
chr11_507356_G_C	chr11:507356	0.110	0.061	0.388	0.0040%
chr11_518625_C_G	chr11:518625	0.025	-0.003	0.388	0.0026%
chr11_518838_C_A	chr11:518838	0.073	0.091	0.388	<0.001%
chr11_507005_G_A	chr11:507005	-0.216	-0.113	0.088	<0.001%
chr11_506386_T_C	chr11:506386	-0.116	-0.162	-0.376	0.0013%
chr11_507432_G_A	chr11:507432	0.083	0.055	0.376	0.036%
chr11_507452_A_G	chr11:507452	-0.083	-0.066	-0.376	<0.001%
chr11_518613_C_T	chr11:518613	0.211	0.093	0.271	0.0020%
chr11_494828_C_T	chr11:494828	-0.007	0.058	0.365	0.0039%
chr11_506996_C_G	chr11:506996	-0.047	-0.049	-0.365	<0.001%
chr11_518847_C_T	chr11:518847	-0.030	0.020	0.365	<0.001%
chr11_507233_G_A	chr11:507233	0.203	0.121	0.200	0.0013%
chr11_518591_G_C	chr11:518591	-0.200	-0.061	-0.118	<0.001%
chr11_494863_C_T	chr11:494863	0.007	0.072	0.353	0.0033%
chr11_507265_A_G	chr11:507265	-0.017	-0.093	-0.353	<0.001%
chr11_507455_C_T	chr11:507455	0.068	0.056	0.353	<0.001%
chr11_507474_C_A	chr11:507474	0.042	0.025	0.353	0.0013%
chr11_518863_A_G	chr11:518863	-0.180	-0.084	-0.353	0.0013%
chr11_518867_G_C	chr11:518867	-0.200	-0.051	-0.282	<0.001%
chr11_518881_G_C	chr11:518881	-0.200	0.036	-0.235	0.050%
chr11_507109_T_C	chr11:507109	-0.196	-0.065	0.000	<0.001%
chr11_506303_G_T	chr11:506303	-0.085	-0.079	-0.341	<0.001%
chr11_506416_T_C	chr11:506416	0.116	0.084	0.341	0.0026%
chr11_506936_C_A	chr11:506936	-0.017	0.053	0.341	0.0013%
chr11_507460_C_A	chr11:507460	0.077	0.075	0.341	<0.001%
chr11_518784_G_C	chr11:518784	-0.176	-0.086	-0.341	<0.001%
chr11_518792_G_A	chr11:518792	0.020	0.063	0.341	0.0053%
chr11_506879_C_A	chr11:506879	0.023	-0.449	-0.329	<0.001%
chr11_507216_C_A	chr11:507216	0.037	0.015	0.329	<0.001%
chr11_518748_C_T	chr11:518748	0.111	0.090	0.329	<0.001%
chr11_518773_G_A	chr11:518773	0.050	0.067	0.329	<0.001%
chr11_518802_C_A	chr11:518802	-0.087	0.088	0.329	0.0026%
chr11_518818_G_T	chr11:518818	0.123	0.058	0.329	<0.001%
chr11_518844_A_C	chr11:518844	-0.087	-0.075	-0.329	<0.001%
chr11_506841_T_C	chr11:506841	0.183	-0.117	-0.118	0.018%
chr11_507238_T_G	chr11:507238	-0.183	-0.056	-0.188	0.0034%
chr11_518738_C_T	chr11:518738	-0.183	0.024	-0.012	<0.001%
chr11_518846_G_C	chr11:518846	-0.183	-0.008	-0.094	<0.001%
chr11_506826_G_C	chr11:506826	0.180	0.071	0.071	11.4%
chr11_507131_C_A	chr11:507131	0.180	0.222	0.118	0.0020%
chr11_518752_C_A	chr11:518752	-0.002	0.081	0.318	0.099%
chr11_518793_G_A	chr11:518793	-0.180	0.011	0.235	<0.001%
chr11_518767_G_C	chr11:518767	-0.178	-0.048	0.071	<0.001%
chr11_506845_G_A	chr11:506845	0.176	-0.051	0.141	<0.001%
chr11_507301_G_C	chr11:507301	0.027	0.067	0.306	0.0079%
chr11_507528_C_T	chr11:507528	0.008	0.049	0.306	<0.001%
chr11_518750_G_A	chr11:518750	0.033	0.062	0.306	<0.001%
chr11_518777_C_T	chr11:518777	0.100	0.091	0.306	0.0026%
chr11_518849_C_A	chr11:518849	-0.003	0.066	0.306	<0.001%
chr11_518593_G_A	chr11:518593	0.172	0.038	0.271	<0.001%
chr11_507034_C_T	chr11:507034	0.043	0.029	0.300	0.0099%
chr11_507263_T_G	chr11:507263	-0.170	-0.033	-0.088	<0.001%
chr11_518691_C_G	chr11:518691	0.170	-0.020	0.141	0.0013%
chr11_494811_G_C	chr11:494811	-0.037	-0.070	-0.294	0.0013%
chr11_506357_G_A	chr11:506357	0.145	0.249	0.294	<0.001%
chr11_507486_G_A	chr11:507486	0.088	0.049	0.294	<0.001%
chr11_518542_C_G	chr11:518542	0.113	0.135	0.294	0.0020%
chr11_518681_C_G	chr11:518681	0.064	0.095	0.294	0.0013%
chr11_518714_A_G	chr11:518714	-0.166	-0.036	-0.106	0.0072%
chr11_518735_G_C	chr11:518735	-0.077	-0.155	-0.294	0.0039%
chr11_518749_C_T	chr11:518749	0.043	0.060	0.294	0.035%
chr11_518768_A_G	chr11:518768	-0.060	-0.055	-0.294	<0.001%
chr11_518807_A_G	chr11:518807	-0.070	-0.084	-0.294	<0.001%
chr11_518860_G_A	chr11:518860	0.130	0.065	0.294	0.0013%
chr11_494822_C_G	chr11:494822	-0.013	0.024	0.288	0.0033%
chr11_507002_C_T	chr11:507002	0.057	0.047	0.288	0.017%
chr11_507030_A_G	chr11:507030	-0.073	-0.079	-0.288	0.0020%
chr11_507553_C_G	chr11:507553	0.092	0.052	0.288	0.0033%
chr11_506430_G_A	chr11:506430	-0.073	-0.094	-0.282	0.0013%
chr11_506808_A_T	chr11:506808	-0.042	-0.239	0.282	<0.001%
chr11_518769_C_T	chr11:518769	-0.023	0.027	0.282	0.0020%
chr11_518789_C_T	chr11:518789	0.077	0.075	0.282	0.0046%
chr11_518850_G_T	chr11:518850	0.030	0.053	0.282	0.0013%
chr11_518859_C_G	chr11:518859	-0.156	-0.038	-0.129	0.800%
chr11_494913_C_T	chr11:494913	0.067	0.077	0.271	0.011%
chr11_507078_T_C	chr11:507078	-0.053	-0.089	-0.271	0.0013%
chr11_518622_C_T	chr11:518622	0.093	0.070	0.271	0.0013%
chr11_518667_C_A	chr11:518667	-0.153	-0.104	-0.094	<0.001%
chr11_518688_G_A	chr11:518688	0.153	0.029	-0.106	0.014%
chr11_518755_C_T	chr11:518755	0.002	0.041	0.271	0.0026%
chr11_518795_G_C	chr11:518795	-0.073	0.096	0.271	<0.001%
chr11_494914_G_A	chr11:494914	0.060	0.053	0.265	0.0053%
chr11_518798_C_T	chr11:518798	-0.150	-0.082	0.082	0.0013%
chr11_506330_G_A	chr11:506330	0.101	0.221	0.259	<0.001%
chr11_506538_C_A	chr11:506538	0.062	0.028	0.259	<0.001%
chr11_506697_G_A	chr11:506697	-0.038	-0.076	-0.259	0.0013%
chr11_506885_C_G	chr11:506885	-0.077	-0.086	-0.259	<0.001%
chr11_506954_G_A	chr11:506954	0.083	0.030	0.259	0.0026%
chr11_506955_A_G	chr11:506955	0.146	-0.018	0.071	0.0013%
chr11_507218_G_A	chr11:507218	0.146	0.058	0.082	<0.001%
chr11_507286_T_G	chr11:507286	-0.023	-0.032	-0.259	0.122%
chr11_507441_T_C	chr11:507441	-0.045	-0.038	-0.259	0.0090%
chr11_507493_G_C	chr11:507493	-0.003	0.011	0.259	<0.001%
chr11_518772_G_T	chr11:518772	0.057	0.042	0.259	<0.001%
chr11_518779_G_T	chr11:518779	0.133	0.049	0.259	0.0039%
chr11_518880_C_T	chr11:518880	0.100	0.065	0.259	0.0020%
chr11_518709_G_A	chr11:518709	-0.145	0.018	0.059	<0.001%
chr11_495021_C_T	chr11:495021	0.000	-0.055	-0.253	<0.001%
chr11_507033_C_T	chr11:507033	-0.027	0.013	0.253	0.0020%
chr11_507184_G_A	chr11:507184	0.143	0.088	0.129	<0.001%
chr11_507199_C_A	chr11:507199	-0.050	0.011	-0.253	<0.001%
chr11_507266_G_T	chr11:507266	0.003	0.001	0.253	<0.001%
chr11_507482_G_A	chr11:507482	0.055	0.043	0.253	<0.001%
chr11_506377_C_T	chr11:506377	-0.065	-0.091	-0.247	<0.001%
chr11_506747_C_T	chr11:506747	-0.048	-0.074	-0.247	0.669%
chr11_506902_G_A	chr11:506902	-0.013	-0.018	0.247	<0.001%
chr11_507171_C_T	chr11:507171	0.140	0.100	0.076	<0.001%
chr11_507180_G_A	chr11:507180	-0.100	-0.062	-0.247	0.0013%
chr11_518541_T_G	chr11:518541	0.045	0.053	0.247	0.0013%
chr11_518754_C_T	chr11:518754	0.097	0.048	0.247	<0.001%
chr11_518779_G_A	chr11:518779	0.080	0.060	0.247	0.0085%
chr11_518816_G_A	chr11:518816	0.103	0.058	0.247	0.018%
chr11_518885_G_A	chr11:518885	0.033	0.058	0.247	0.0028%
chr11_518650_G_A	chr11:518650	-0.137	-0.042	-0.235	0.0053%
chr11_518575_C_T	chr11:518575	0.137	-0.048	0.047	0.0013%
chr11_507319_G_T	chr11:507319	0.053	0.056	0.241	<0.001%
chr11_518808_T_C	chr11:518808	0.136	0.042	0.059	9.78%
chr11_518820_C_G	chr11:518820	-0.136	-0.030	-0.047	0.0013%
chr11_518632_C_A	chr11:518632	0.135	0.099	0.082	0.585%
chr11_518654_T_A	chr11:518654	-0.135	-0.082	-0.200	0.0013%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.