Home / Gene
PLPP2
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near PLPP2
chr19:181,043..391,403, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr19_267297_A_G | chr19:267297 | 0.737 | 0.332 | 1.000 | — |
| chr19_267554_G_C | chr19:267554 | -1.000 | -0.494 | -1.000 | 0.0013% |
| chr19_267544_G_C | chr19:267544 | -1.000 | -0.424 | -1.000 | <0.001% |
| chr19_267549_C_T | chr19:267549 | -1.000 | -0.467 | -1.000 | <0.001% |
| chr19_267156_C_G | chr19:267156 | 0.532 | -0.076 | 1.000 | — |
| chr19_267151_T_C | chr19:267151 | -0.383 | -0.036 | -1.000 | — |
| chr19_267218_G_A | chr19:267218 | 0.150 | -0.028 | 0.812 | — |
| chr19_267269_C_G | chr19:267269 | -0.201 | 0.033 | -0.759 | — |
| chr19_267293_T_A | chr19:267293 | 0.346 | 0.048 | 0.741 | — |
| chr19_267514_C_G | chr19:267514 | -0.282 | -0.051 | -0.676 | <0.001% |
| chr19_267292_T_A | chr19:267292 | 0.163 | 0.051 | 0.612 | — |
| chr19_267294_T_C | chr19:267294 | 0.138 | 0.147 | 0.600 | — |
| chr19_267267_T_C | chr19:267267 | 0.250 | -0.015 | 0.576 | — |
| chr19_267292_T_G | chr19:267292 | 0.138 | 0.058 | 0.576 | — |
| chr19_267269_C_T | chr19:267269 | -0.140 | 0.020 | -0.565 | — |
| chr19_267517_G_A | chr19:267517 | 0.115 | 0.246 | 0.541 | 0.0026% |
| chr19_267151_T_G | chr19:267151 | -0.218 | -0.030 | -0.524 | — |
| chr19_267155_G_A | chr19:267155 | -0.181 | -0.005 | -0.524 | — |
| chr19_267287_A_C | chr19:267287 | -0.145 | -0.086 | -0.506 | — |
| chr19_267270_C_G | chr19:267270 | 0.228 | -0.005 | 0.494 | — |
| chr19_267295_A_C | chr19:267295 | -0.181 | -0.114 | -0.482 | — |
| chr19_267043_T_G | chr19:267043 | 0.023 | 0.069 | 0.476 | — |
| chr19_267237_G_A | chr19:267237 | 0.195 | 0.028 | 0.471 | — |
| chr19_267237_G_T | chr19:267237 | -0.168 | 0.013 | -0.465 | — |
| chr19_267283_G_A | chr19:267283 | -0.042 | 0.008 | -0.459 | — |
| chr19_267197_A_C | chr19:267197 | 0.256 | -0.005 | 0.447 | — |
| chr19_267285_A_T | chr19:267285 | -0.201 | 0.015 | -0.447 | — |
| chr19_267303_C_A | chr19:267303 | -0.103 | 0.066 | -0.447 | — |
| chr19_267217_A_G | chr19:267217 | -0.175 | 0.000 | -0.435 | 0.0020% |
| chr19_267266_T_G | chr19:267266 | 0.093 | -0.020 | 0.435 | — |
| chr19_267175_C_G | chr19:267175 | 0.245 | -0.071 | 0.100 | — |
| chr19_267269_C_A | chr19:267269 | -0.023 | 0.013 | -0.424 | — |
| chr19_267271_G_A | chr19:267271 | -0.118 | -0.003 | -0.424 | — |
| chr19_267157_C_G | chr19:267157 | -0.145 | -0.018 | -0.418 | — |
| chr19_267044_T_G | chr19:267044 | 0.085 | 0.038 | 0.412 | — |
| chr19_267151_T_A | chr19:267151 | -0.171 | -0.036 | -0.412 | — |
| chr19_267250_C_A | chr19:267250 | -0.153 | 0.000 | -0.412 | — |
| chr19_267273_C_A | chr19:267273 | -0.047 | -0.038 | -0.412 | — |
| chr19_267309_A_C | chr19:267309 | -0.073 | 0.063 | -0.412 | — |
| chr19_267173_T_A | chr19:267173 | -0.090 | -0.025 | -0.406 | — |
| chr19_267250_C_G | chr19:267250 | -0.166 | 0.000 | -0.406 | — |
| chr19_267043_T_C | chr19:267043 | 0.048 | 0.048 | 0.400 | 0.0020% |
| chr19_267153_G_C | chr19:267153 | -0.166 | -0.015 | -0.394 | — |
| chr19_267270_C_A | chr19:267270 | -0.043 | -0.005 | -0.382 | — |
| chr19_267281_A_T | chr19:267281 | -0.077 | 0.000 | -0.376 | — |
| chr19_267301_C_A | chr19:267301 | -0.083 | -0.003 | -0.376 | — |
| chr19_267301_C_G | chr19:267301 | -0.140 | 0.015 | -0.376 | — |
| chr19_267305_G_T | chr19:267305 | -0.073 | 0.015 | -0.376 | — |
| chr19_267160_T_G | chr19:267160 | -0.097 | -0.074 | -0.365 | — |
| chr19_267234_G_C | chr19:267234 | -0.206 | -0.008 | -0.271 | — |
| chr19_267242_G_C | chr19:267242 | -0.116 | -0.028 | -0.365 | — |
| chr19_267281_A_C | chr19:267281 | -0.002 | 0.086 | 0.365 | — |
| chr19_267284_G_A | chr19:267284 | -0.082 | 0.000 | -0.365 | — |
| chr19_267134_C_T | chr19:267134 | 0.128 | 0.000 | 0.359 | — |
| chr19_267148_C_A | chr19:267148 | 0.203 | -0.096 | 0.288 | — |
| chr19_267153_G_T | chr19:267153 | -0.128 | 0.023 | -0.359 | — |
| chr19_267055_A_C | chr19:267055 | 0.062 | 0.046 | 0.353 | — |
| chr19_267146_C_A | chr19:267146 | 0.067 | 0.005 | 0.353 | — |
| chr19_267211_A_T | chr19:267211 | 0.130 | -0.038 | 0.353 | — |
| chr19_267242_G_T | chr19:267242 | -0.110 | 0.000 | -0.353 | — |
| chr19_267265_G_A | chr19:267265 | -0.073 | 0.000 | -0.353 | — |
| chr19_267287_A_G | chr19:267287 | 0.131 | 0.018 | 0.353 | — |
| chr19_267297_A_C | chr19:267297 | -0.120 | -0.013 | -0.353 | — |
| chr19_267300_A_T | chr19:267300 | -0.148 | 0.030 | -0.353 | — |
| chr19_267256_G_T | chr19:267256 | 0.156 | 0.030 | 0.347 | — |
| chr19_267268_C_G | chr19:267268 | -0.003 | 0.018 | -0.347 | — |
| chr19_267052_T_G | chr19:267052 | 0.085 | 0.000 | 0.341 | — |
| chr19_267148_C_T | chr19:267148 | 0.153 | -0.036 | 0.341 | — |
| chr19_267155_G_C | chr19:267155 | -0.140 | -0.015 | -0.341 | — |
| chr19_267260_G_C | chr19:267260 | -0.072 | -0.003 | -0.341 | — |
| chr19_267271_G_C | chr19:267271 | -0.083 | 0.013 | -0.341 | — |
| chr19_267272_C_A | chr19:267272 | -0.030 | -0.015 | -0.341 | 0.0020% |
| chr19_267273_C_G | chr19:267273 | -0.055 | -0.005 | -0.341 | — |
| chr19_267274_C_A | chr19:267274 | -0.037 | 0.018 | -0.341 | — |
| chr19_267275_C_G | chr19:267275 | -0.092 | -0.020 | -0.341 | — |
| chr19_267299_C_A | chr19:267299 | -0.053 | 0.020 | -0.341 | <0.001% |
| chr19_267234_G_T | chr19:267234 | -0.190 | -0.003 | -0.253 | — |
| chr19_267157_C_A | chr19:267157 | -0.080 | 0.020 | -0.329 | — |
| chr19_267179_G_A | chr19:267179 | -0.136 | 0.086 | -0.329 | — |
| chr19_267299_C_T | chr19:267299 | 0.080 | -0.033 | -0.329 | <0.001% |
| chr19_267302_G_C | chr19:267302 | -0.060 | -0.010 | -0.329 | — |
| chr19_267303_C_G | chr19:267303 | -0.110 | 0.025 | -0.329 | — |
| chr19_267268_C_T | chr19:267268 | 0.185 | 0.056 | 0.294 | — |
| chr19_267084_C_G | chr19:267084 | -0.072 | -0.053 | -0.318 | — |
| chr19_267129_G_C | chr19:267129 | 0.045 | -0.018 | 0.318 | — |
| chr19_267129_G_T | chr19:267129 | -0.065 | -0.041 | -0.318 | — |
| chr19_267150_A_T | chr19:267150 | -0.088 | -0.033 | -0.318 | — |
| chr19_267259_C_T | chr19:267259 | -0.133 | -0.010 | -0.318 | — |
| chr19_267299_C_G | chr19:267299 | -0.131 | -0.036 | -0.318 | — |
| chr19_267304_C_A | chr19:267304 | -0.057 | 0.020 | -0.318 | — |
| chr19_267306_C_G | chr19:267306 | -0.097 | 0.018 | -0.318 | — |
| chr19_267306_C_T | chr19:267306 | -0.103 | 0.003 | -0.318 | — |
| chr19_267307_G_C | chr19:267307 | -0.065 | -0.020 | -0.318 | — |
| chr19_267310_G_T | chr19:267310 | -0.150 | 0.015 | -0.318 | — |
| chr19_267047_A_T | chr19:267047 | 0.073 | 0.030 | 0.312 | — |
| chr19_267409_G_A | chr19:267409 | -0.022 | 0.005 | 0.312 | <0.001% |
| chr19_267080_A_C | chr19:267080 | -0.095 | -0.053 | -0.306 | — |
| chr19_267149_G_A | chr19:267149 | 0.150 | 0.018 | 0.306 | <0.001% |
| chr19_267157_C_T | chr19:267157 | -0.097 | 0.015 | -0.306 | — |
| chr19_267264_A_G | chr19:267264 | -0.048 | -0.020 | -0.306 | — |
| chr19_267307_G_A | chr19:267307 | -0.082 | -0.013 | -0.306 | — |
| chr19_267251_T_A | chr19:267251 | 0.080 | 0.033 | 0.300 | — |
| chr19_267317_A_G | chr19:267317 | -0.105 | -0.051 | -0.300 | 0.0013% |
| chr19_267492_T_G | chr19:267492 | -0.019 | -0.010 | 0.300 | 0.0013% |
| chr19_267252_G_C | chr19:267252 | -0.168 | -0.010 | -0.229 | — |
| chr19_267150_A_C | chr19:267150 | -0.090 | -0.048 | -0.294 | — |
| chr19_267210_G_C | chr19:267210 | 0.000 | -0.025 | 0.294 | — |
| chr19_267232_G_C | chr19:267232 | -0.116 | 0.008 | -0.294 | — |
| chr19_267272_C_G | chr19:267272 | -0.015 | -0.036 | -0.294 | — |
| chr19_267286_C_A | chr19:267286 | 0.141 | 0.099 | 0.294 | — |
| chr19_267303_C_T | chr19:267303 | -0.087 | 0.043 | -0.294 | — |
| chr19_267307_G_T | chr19:267307 | -0.068 | -0.013 | -0.294 | — |
| chr19_267082_A_G | chr19:267082 | 0.063 | 0.036 | 0.288 | — |
| chr19_267091_G_C | chr19:267091 | -0.007 | 0.008 | -0.282 | — |
| chr19_267118_G_C | chr19:267118 | 0.070 | -0.025 | 0.282 | — |
| chr19_267190_T_C | chr19:267190 | 0.123 | -0.010 | 0.282 | — |
| chr19_267252_G_T | chr19:267252 | -0.160 | 0.010 | -0.224 | — |
| chr19_267282_G_T | chr19:267282 | -0.018 | -0.036 | -0.282 | — |
| chr19_267302_G_A | chr19:267302 | -0.095 | 0.036 | -0.282 | — |
| chr19_267093_A_C | chr19:267093 | 0.158 | 0.023 | 0.059 | — |
| chr19_267079_T_C | chr19:267079 | -0.095 | -0.003 | -0.276 | <0.001% |
| chr19_267232_G_A | chr19:267232 | 0.087 | 0.025 | 0.276 | — |
| chr19_267147_C_A | chr19:267147 | 0.138 | 0.038 | 0.271 | — |
| chr19_267161_C_A | chr19:267161 | 0.123 | 0.008 | 0.271 | <0.001% |
| chr19_267167_G_C | chr19:267167 | 0.095 | -0.020 | 0.271 | — |
| chr19_267177_C_G | chr19:267177 | -0.153 | 0.003 | -0.259 | — |
| chr19_267210_G_T | chr19:267210 | 0.067 | 0.000 | 0.271 | — |
| chr19_267247_G_T | chr19:267247 | -0.065 | -0.003 | -0.271 | — |
| chr19_267274_C_G | chr19:267274 | -0.007 | -0.008 | -0.271 | — |
| chr19_267281_A_G | chr19:267281 | -0.111 | -0.015 | -0.271 | — |
| chr19_267305_G_C | chr19:267305 | -0.121 | 0.018 | -0.271 | 0.0020% |
| chr19_267324_A_G | chr19:267324 | 0.048 | -0.066 | -0.271 | 0.0013% |
| chr19_267285_A_G | chr19:267285 | -0.151 | 0.030 | -0.218 | — |
| chr19_267193_C_A | chr19:267193 | 0.126 | 0.053 | 0.265 | — |
| chr19_267227_G_A | chr19:267227 | 0.118 | 0.036 | 0.265 | — |
| chr19_267235_C_A | chr19:267235 | -0.135 | 0.025 | -0.265 | — |
| chr19_267237_G_C | chr19:267237 | -0.092 | -0.013 | -0.265 | — |
| chr19_267240_C_A | chr19:267240 | -0.058 | 0.008 | -0.265 | — |
| chr19_267245_C_A | chr19:267245 | -0.060 | -0.013 | -0.265 | — |
| chr19_267245_C_G | chr19:267245 | -0.085 | -0.018 | -0.265 | — |
| chr19_267261_C_G | chr19:267261 | -0.150 | 0.008 | -0.176 | — |
| chr19_267616_T_A | chr19:267616 | -0.148 | -0.028 | -0.212 | 0.0013% |
| chr19_267220_C_G | chr19:267220 | -0.078 | 0.015 | -0.259 | — |
| chr19_267263_C_T | chr19:267263 | 0.055 | 0.003 | 0.259 | — |
| chr19_267301_C_T | chr19:267301 | -0.088 | 0.005 | -0.259 | — |
| chr19_267525_G_C | chr19:267525 | -0.078 | -0.018 | -0.259 | <0.001% |
| chr19_267071_T_G | chr19:267071 | 0.145 | -0.079 | 0.206 | — |
| chr19_267047_A_C | chr19:267047 | 0.065 | 0.010 | 0.253 | — |
| chr19_267133_T_A | chr19:267133 | 0.083 | 0.013 | 0.253 | — |
| chr19_267144_G_C | chr19:267144 | 0.095 | 0.000 | 0.253 | — |
| chr19_267169_T_A | chr19:267169 | 0.126 | 0.023 | 0.253 | — |
| chr19_267242_G_A | chr19:267242 | 0.121 | 0.010 | 0.253 | — |
| chr19_267247_G_A | chr19:267247 | 0.105 | 0.020 | 0.253 | <0.001% |
| chr19_267474_A_G | chr19:267474 | -0.093 | -0.048 | 0.253 | 66.6% |
| chr19_267504_G_C | chr19:267504 | -0.143 | 0.025 | -0.018 | <0.001% |
| chr19_266905_A_C | chr19:266905 | 0.141 | 0.010 | 0.197 | 0.0013% |
| chr19_267231_T_G | chr19:267231 | 0.141 | -0.074 | 0.129 | — |
| chr19_267079_T_A | chr19:267079 | -0.080 | -0.023 | -0.247 | — |
| chr19_267091_G_T | chr19:267091 | -0.018 | -0.028 | -0.247 | — |
| chr19_267273_C_T | chr19:267273 | -0.035 | 0.003 | -0.247 | — |
| chr19_267277_C_A | chr19:267277 | -0.111 | 0.015 | -0.247 | — |
| chr19_267278_T_A | chr19:267278 | -0.097 | -0.010 | -0.247 | — |
| chr19_267284_G_C | chr19:267284 | -0.063 | 0.010 | -0.247 | — |
| chr19_267305_G_A | chr19:267305 | -0.140 | 0.008 | -0.118 | — |
| chr19_267333_C_T | chr19:267333 | 0.040 | 0.058 | 0.247 | <0.001% |
| chr19_267084_C_T | chr19:267084 | -0.085 | -0.053 | -0.241 | — |
| chr19_267106_T_A | chr19:267106 | 0.080 | 0.028 | 0.241 | — |
| chr19_267125_C_G | chr19:267125 | 0.090 | 0.013 | 0.241 | — |
| chr19_267168_C_T | chr19:267168 | 0.072 | 0.020 | 0.241 | 0.471% |
| chr19_267221_C_G | chr19:267221 | 0.136 | 0.005 | 0.053 | — |
| chr19_267247_G_C | chr19:267247 | -0.067 | -0.020 | -0.241 | — |
| chr19_267472_C_T | chr19:267472 | 0.035 | 0.023 | 0.241 | 0.0020% |
| chr19_267085_A_T | chr19:267085 | -0.092 | -0.010 | -0.235 | — |
| chr19_267238_C_G | chr19:267238 | -0.115 | 0.010 | -0.235 | — |
| chr19_267266_T_C | chr19:267266 | 0.003 | -0.043 | -0.235 | — |
| chr19_267290_G_A | chr19:267290 | 0.108 | 0.018 | 0.235 | — |
| chr19_267080_A_G | chr19:267080 | 0.045 | 0.051 | 0.229 | — |
| chr19_267110_C_G | chr19:267110 | -0.048 | -0.005 | -0.229 | — |
| chr19_267132_A_C | chr19:267132 | 0.030 | -0.018 | 0.229 | — |
| chr19_267141_G_C | chr19:267141 | 0.070 | 0.010 | 0.229 | — |
| chr19_267156_C_T | chr19:267156 | 0.118 | 0.005 | 0.229 | — |
| chr19_267194_C_G | chr19:267194 | 0.130 | 0.010 | 0.153 | — |
| chr19_267233_C_A | chr19:267233 | -0.130 | 0.015 | -0.159 | 0.0014% |
| chr19_267199_G_C | chr19:267199 | 0.128 | -0.008 | 0.147 | — |
| chr19_267466_C_G | chr19:267466 | 0.127 | -0.013 | -0.088 | 0.0013% |
| chr19_267078_T_C | chr19:267078 | -0.053 | -0.020 | -0.224 | — |
| chr19_267078_T_G | chr19:267078 | -0.075 | -0.013 | -0.224 | — |
| chr19_267079_T_G | chr19:267079 | -0.045 | -0.008 | -0.224 | — |
| chr19_267086_C_G | chr19:267086 | -0.126 | -0.030 | -0.112 | 0.0020% |
| chr19_267096_C_T | chr19:267096 | 0.012 | 0.058 | 0.224 | — |
| chr19_267142_C_A | chr19:267142 | -0.032 | 0.028 | -0.224 | — |
| chr19_267150_A_G | chr19:267150 | -0.070 | -0.041 | -0.224 | <0.001% |
| chr19_267166_T_A | chr19:267166 | 0.077 | 0.013 | 0.224 | — |
| chr19_267252_G_A | chr19:267252 | -0.013 | -0.041 | -0.224 | — |
| chr19_267258_A_G | chr19:267258 | -0.125 | -0.013 | -0.224 | — |
| chr19_267284_G_T | chr19:267284 | -0.030 | 0.033 | -0.224 | — |
| chr19_267286_C_T | chr19:267286 | -0.065 | -0.003 | -0.224 | — |
| chr19_267309_A_T | chr19:267309 | -0.080 | -0.038 | -0.224 | — |
| chr19_267205_G_C | chr19:267205 | -0.125 | -0.005 | -0.135 | — |
| chr19_267041_G_A | chr19:267041 | -0.055 | -0.005 | -0.218 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.