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POLRMT
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near POLRMT
chr19:517,220..733,537, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr19_524191_C_T | chr19:524191 | 1.000 | 1.000 | 1.000 | 0.0013% |
| chr19_530914_G_A | chr19:530914 | 1.000 | 1.000 | 1.000 | 0.097% |
| chr19_524194_A_G | chr19:524194 | 0.630 | 1.000 | 1.000 | <0.001% |
| chr19_524192_C_T | chr19:524192 | 0.639 | 1.000 | 1.000 | 0.0020% |
| chr19_524192_C_A | chr19:524192 | 0.494 | 0.959 | 1.000 | <0.001% |
| chr19_531096_C_T | chr19:531096 | -0.013 | 0.379 | 1.000 | 0.0026% |
| chr19_530916_T_A | chr19:530916 | 0.587 | 0.693 | 0.871 | 0.0053% |
| chr19_531213_T_C | chr19:531213 | -0.080 | -0.170 | -1.000 | <0.001% |
| chr19_531201_G_C | chr19:531201 | -0.093 | -0.124 | -0.941 | — |
| chr19_530907_G_C | chr19:530907 | 0.444 | 0.519 | 0.929 | <0.001% |
| chr19_530915_C_T | chr19:530915 | 0.524 | 0.543 | 0.635 | 0.0046% |
| chr19_524193_C_T | chr19:524193 | 0.330 | 0.805 | 0.903 | 0.0013% |
| chr19_530926_T_C | chr19:530926 | -0.496 | -0.470 | -0.624 | <0.001% |
| chr19_524281_C_G | chr19:524281 | 0.085 | 0.301 | 0.806 | <0.001% |
| chr19_531199_T_C | chr19:531199 | -0.003 | -0.129 | -0.765 | — |
| chr19_524196_C_A | chr19:524196 | 0.149 | 0.582 | 0.747 | <0.001% |
| chr19_524282_C_T | chr19:524282 | 0.082 | 0.391 | 0.747 | 0.131% |
| chr19_524281_C_A | chr19:524281 | 0.106 | 0.291 | 0.712 | 0.012% |
| chr19_531212_T_C | chr19:531212 | -0.106 | -0.122 | -0.706 | — |
| chr19_531091_C_T | chr19:531091 | -0.396 | 0.176 | 0.435 | <0.001% |
| chr19_530918_C_T | chr19:530918 | 0.393 | 0.409 | 0.282 | 0.0020% |
| chr19_531115_C_T | chr19:531115 | 0.220 | 0.284 | 0.694 | 93.3% |
| chr19_524200_C_T | chr19:524200 | 0.060 | 0.402 | 0.682 | 0.0013% |
| chr19_524685_G_T | chr19:524685 | 0.074 | 0.075 | 0.640 | 0.027% |
| chr19_524283_C_T | chr19:524283 | 0.128 | 0.350 | 0.635 | <0.001% |
| chr19_531203_T_C | chr19:531203 | -0.080 | -0.063 | -0.612 | — |
| chr19_530815_T_C | chr19:530815 | -0.343 | -0.348 | -0.506 | <0.001% |
| chr19_531173_T_C | chr19:531173 | 0.296 | 0.376 | 0.588 | — |
| chr19_531101_C_T | chr19:531101 | 0.130 | 0.173 | 0.576 | 0.0020% |
| chr19_531207_G_C | chr19:531207 | -0.070 | 0.014 | -0.576 | — |
| chr19_524208_G_A | chr19:524208 | -0.039 | -0.298 | -0.574 | 0.0033% |
| chr19_531033_G_C | chr19:531033 | -0.283 | -0.168 | -0.565 | <0.001% |
| chr19_531115_C_A | chr19:531115 | 0.193 | 0.136 | 0.565 | 0.0079% |
| chr19_530893_C_G | chr19:530893 | -0.255 | -0.246 | -0.553 | 0.0046% |
| chr19_531216_T_G | chr19:531216 | 0.193 | 0.138 | 0.553 | — |
| chr19_524224_C_T | chr19:524224 | -0.064 | -0.383 | -0.550 | 0.0027% |
| chr19_531057_G_A | chr19:531057 | -0.040 | -0.039 | -0.529 | <0.001% |
| chr19_531216_T_C | chr19:531216 | -0.017 | -0.076 | -0.518 | — |
| chr19_531304_G_A | chr19:531304 | 0.060 | 0.123 | 0.518 | — |
| chr19_531160_G_C | chr19:531160 | 0.290 | 0.088 | 0.118 | — |
| chr19_531108_C_G | chr19:531108 | 0.060 | 0.084 | 0.494 | <0.001% |
| chr19_531174_G_C | chr19:531174 | -0.276 | -0.099 | -0.376 | — |
| chr19_524379_T_C | chr19:524379 | -0.037 | -0.145 | -0.482 | <0.001% |
| chr19_524225_C_T | chr19:524225 | 0.038 | 0.146 | 0.476 | 0.0013% |
| chr19_524323_C_T | chr19:524323 | -0.014 | -0.322 | -0.471 | 0.0013% |
| chr19_530923_G_C | chr19:530923 | 0.200 | 0.216 | 0.471 | <0.001% |
| chr19_530941_G_C | chr19:530941 | -0.266 | -0.316 | -0.424 | <0.001% |
| chr19_531303_C_A | chr19:531303 | 0.023 | 0.070 | 0.471 | — |
| chr19_524324_C_T | chr19:524324 | -0.005 | -0.345 | -0.459 | 0.0013% |
| chr19_524325_G_A | chr19:524325 | -0.016 | -0.362 | -0.459 | 0.0046% |
| chr19_531196_G_C | chr19:531196 | -0.156 | -0.024 | -0.459 | — |
| chr19_530827_A_T | chr19:530827 | -0.256 | -0.385 | -0.400 | 0.0011% |
| chr19_531182_G_T | chr19:531182 | 0.067 | 0.066 | 0.447 | — |
| chr19_531167_C_A | chr19:531167 | 0.250 | 0.027 | 0.165 | 0.0013% |
| chr19_531303_C_T | chr19:531303 | 0.033 | 0.070 | 0.441 | — |
| chr19_531084_C_T | chr19:531084 | 0.213 | 0.057 | 0.435 | 0.0053% |
| chr19_524262_C_T | chr19:524262 | -0.032 | -0.321 | -0.424 | 0.0020% |
| chr19_531143_C_T | chr19:531143 | -0.136 | -0.052 | -0.424 | <0.001% |
| chr19_531254_C_G | chr19:531254 | 0.143 | 0.090 | 0.424 | — |
| chr19_531190_G_C | chr19:531190 | -0.100 | -0.102 | -0.412 | — |
| chr19_524054_G_T | chr19:524054 | 0.071 | 0.251 | 0.409 | 0.0013% |
| chr19_531119_C_G | chr19:531119 | -0.226 | 0.136 | 0.129 | 0.0013% |
| chr19_524522_C_G | chr19:524522 | -0.010 | 0.026 | 0.399 | 0.0020% |
| chr19_531300_G_T | chr19:531300 | 0.033 | 0.030 | 0.394 | <0.001% |
| chr19_524231_T_C | chr19:524231 | -0.093 | -0.297 | -0.388 | 0.013% |
| chr19_524249_C_T | chr19:524249 | -0.042 | -0.349 | -0.388 | <0.001% |
| chr19_518755_G_C | chr19:518755 | 0.035 | 0.052 | 0.384 | 0.012% |
| chr19_531160_G_A | chr19:531160 | 0.216 | 0.041 | -0.035 | — |
| chr19_531165_G_C | chr19:531165 | -0.216 | -0.016 | -0.271 | — |
| chr19_524334_C_T | chr19:524334 | -0.017 | -0.202 | -0.376 | <0.001% |
| chr19_524376_C_G | chr19:524376 | -0.005 | -0.003 | 0.376 | <0.001% |
| chr19_524417_C_T | chr19:524417 | 0.021 | 0.051 | 0.376 | <0.001% |
| chr19_531109_C_A | chr19:531109 | -0.047 | 0.067 | 0.376 | 0.0013% |
| chr19_531185_C_G | chr19:531185 | 0.093 | 0.052 | 0.376 | — |
| chr19_531215_C_A | chr19:531215 | -0.053 | -0.090 | -0.376 | — |
| chr19_531217_C_T | chr19:531217 | 0.106 | 0.094 | 0.376 | — |
| chr19_531241_C_T | chr19:531241 | 0.213 | 0.170 | 0.353 | — |
| chr19_524440_T_C | chr19:524440 | -0.045 | -0.067 | -0.374 | 0.0013% |
| chr19_524262_C_G | chr19:524262 | -0.029 | -0.278 | -0.371 | 0.0039% |
| chr19_524312_A_G | chr19:524312 | 0.051 | 0.335 | 0.371 | 0.0020% |
| chr19_524369_G_A | chr19:524369 | -0.003 | -0.147 | -0.371 | 0.014% |
| chr19_530943_C_T | chr19:530943 | -0.205 | -0.223 | -0.365 | <0.001% |
| chr19_531210_C_A | chr19:531210 | -0.003 | 0.044 | 0.365 | — |
| chr19_531220_T_A | chr19:531220 | -0.097 | -0.065 | -0.365 | — |
| chr19_531243_A_C | chr19:531243 | -0.146 | -0.090 | -0.365 | — |
| chr19_531299_G_T | chr19:531299 | 0.000 | 0.013 | 0.365 | <0.001% |
| chr19_524247_G_A | chr19:524247 | 0.072 | 0.212 | 0.359 | <0.001% |
| chr19_524515_C_T | chr19:524515 | 0.035 | -0.015 | 0.359 | <0.001% |
| chr19_530876_G_A | chr19:530876 | -0.203 | -0.171 | -0.129 | <0.001% |
| chr19_531158_A_C | chr19:531158 | 0.203 | 0.082 | 0.141 | — |
| chr19_531182_G_C | chr19:531182 | -0.057 | 0.048 | 0.353 | — |
| chr19_531202_C_G | chr19:531202 | 0.113 | 0.086 | 0.353 | — |
| chr19_518755_G_T | chr19:518755 | 0.042 | 0.047 | 0.340 | 0.020% |
| chr19_530850_G_A | chr19:530850 | -0.191 | -0.277 | -0.259 | <0.001% |
| chr19_531300_G_A | chr19:531300 | 0.070 | 0.046 | 0.335 | — |
| chr19_524265_C_T | chr19:524265 | -0.045 | -0.313 | -0.329 | <0.001% |
| chr19_531033_G_T | chr19:531033 | -0.126 | -0.113 | -0.329 | <0.001% |
| chr19_531195_C_G | chr19:531195 | 0.100 | 0.123 | 0.329 | — |
| chr19_531217_C_G | chr19:531217 | 0.080 | 0.055 | 0.329 | — |
| chr19_531296_G_A | chr19:531296 | 0.047 | 0.074 | 0.329 | — |
| chr19_524562_C_T | chr19:524562 | -0.002 | -0.011 | 0.323 | <0.001% |
| chr19_518754_G_A | chr19:518754 | 0.042 | 0.042 | 0.322 | <0.001% |
| chr19_530991_C_G | chr19:530991 | 0.156 | 0.140 | 0.318 | <0.001% |
| chr19_531157_G_T | chr19:531157 | 0.180 | 0.055 | 0.153 | — |
| chr19_531189_G_T | chr19:531189 | 0.097 | 0.080 | 0.318 | — |
| chr19_531224_G_A | chr19:531224 | -0.126 | 0.003 | 0.318 | — |
| chr19_531066_A_C | chr19:531066 | -0.176 | -0.118 | -0.082 | <0.001% |
| chr19_531069_G_C | chr19:531069 | 0.176 | 0.074 | 0.294 | 0.0026% |
| chr19_531301_G_T | chr19:531301 | 0.063 | 0.046 | 0.312 | — |
| chr19_524344_C_G | chr19:524344 | 0.003 | -0.160 | -0.306 | 0.0013% |
| chr19_530993_G_C | chr19:530993 | 0.105 | 0.178 | 0.306 | 0.0033% |
| chr19_531151_G_A | chr19:531151 | 0.173 | 0.003 | 0.071 | 0.0026% |
| chr19_531192_T_C | chr19:531192 | -0.136 | -0.052 | -0.306 | — |
| chr19_531236_C_T | chr19:531236 | 0.110 | 0.119 | 0.306 | — |
| chr19_531242_T_C | chr19:531242 | -0.020 | -0.030 | -0.306 | — |
| chr19_531297_C_T | chr19:531297 | -0.037 | 0.047 | 0.306 | 0.0013% |
| chr19_531039_A_G | chr19:531039 | 0.170 | 0.199 | 0.294 | <0.001% |
| chr19_531229_G_A | chr19:531229 | 0.170 | 0.155 | 0.188 | — |
| chr19_531298_G_T | chr19:531298 | 0.090 | 0.055 | 0.300 | — |
| chr19_530826_A_T | chr19:530826 | -0.156 | -0.230 | -0.294 | 0.065% |
| chr19_531153_A_T | chr19:531153 | -0.166 | -0.003 | -0.259 | — |
| chr19_531186_T_A | chr19:531186 | 0.103 | 0.077 | 0.294 | — |
| chr19_531221_T_C | chr19:531221 | -0.017 | -0.041 | -0.294 | — |
| chr19_531292_G_T | chr19:531292 | -0.003 | 0.072 | 0.294 | — |
| chr19_531298_G_A | chr19:531298 | 0.033 | 0.052 | 0.294 | — |
| chr19_531301_G_A | chr19:531301 | 0.073 | 0.038 | 0.294 | 0.0020% |
| chr19_524515_C_G | chr19:524515 | 0.018 | 0.027 | 0.291 | 6.59% |
| chr19_523993_A_C | chr19:523993 | 0.010 | 0.044 | 0.290 | 0.0013% |
| chr19_524355_G_C | chr19:524355 | 0.057 | 0.171 | 0.288 | <0.001% |
| chr19_530934_C_T | chr19:530934 | 0.163 | 0.142 | 0.200 | <0.001% |
| chr19_531036_T_C | chr19:531036 | -0.163 | -0.056 | -0.165 | 0.0026% |
| chr19_531299_G_A | chr19:531299 | 0.063 | 0.051 | 0.288 | 0.373% |
| chr19_524250_G_A | chr19:524250 | -0.034 | -0.241 | -0.282 | 0.0020% |
| chr19_530863_G_T | chr19:530863 | -0.103 | -0.201 | -0.282 | 0.0013% |
| chr19_531211_C_T | chr19:531211 | 0.040 | 0.030 | 0.282 | — |
| chr19_531220_T_C | chr19:531220 | -0.063 | -0.055 | -0.282 | — |
| chr19_531277_G_C | chr19:531277 | 0.143 | 0.141 | 0.282 | — |
| chr19_524526_C_T | chr19:524526 | -0.012 | -0.053 | -0.279 | <0.001% |
| chr19_524383_G_A | chr19:524383 | 0.012 | -0.015 | -0.276 | 0.0039% |
| chr19_531161_C_T | chr19:531161 | 0.156 | 0.070 | 0.176 | — |
| chr19_524218_C_T | chr19:524218 | 0.014 | 0.091 | 0.271 | 0.0013% |
| chr19_531159_G_T | chr19:531159 | 0.077 | -0.014 | -0.271 | — |
| chr19_531161_C_A | chr19:531161 | 0.153 | -0.001 | -0.024 | — |
| chr19_531185_C_A | chr19:531185 | 0.153 | -0.047 | -0.035 | — |
| chr19_531228_G_C | chr19:531228 | 0.000 | 0.016 | -0.271 | — |
| chr19_531293_G_T | chr19:531293 | 0.017 | 0.043 | 0.271 | — |
| chr19_530849_C_A | chr19:530849 | -0.151 | -0.124 | -0.224 | 0.0048% |
| chr19_524251_C_T | chr19:524251 | 0.027 | -0.080 | -0.265 | 0.0013% |
| chr19_524382_G_A | chr19:524382 | -0.005 | -0.058 | -0.265 | <0.001% |
| chr19_524402_G_A | chr19:524402 | 0.027 | -0.063 | -0.265 | 0.073% |
| chr19_531159_G_C | chr19:531159 | 0.150 | 0.065 | 0.106 | — |
| chr19_524261_C_T | chr19:524261 | -0.028 | -0.253 | -0.259 | <0.001% |
| chr19_530807_C_G | chr19:530807 | -0.097 | -0.142 | -0.259 | 0.942% |
| chr19_530951_G_A | chr19:530951 | -0.120 | -0.124 | -0.259 | 0.0039% |
| chr19_531056_T_G | chr19:531056 | -0.047 | 0.046 | -0.259 | 0.0033% |
| chr19_531212_T_A | chr19:531212 | 0.007 | -0.062 | -0.259 | — |
| chr19_531227_T_C | chr19:531227 | 0.073 | -0.010 | -0.259 | — |
| chr19_531291_G_A | chr19:531291 | 0.007 | 0.046 | 0.259 | — |
| chr19_531294_A_C | chr19:531294 | -0.017 | -0.039 | -0.259 | — |
| chr19_531294_A_G | chr19:531294 | -0.050 | -0.036 | -0.259 | — |
| chr19_524189_A_G | chr19:524189 | 0.076 | 0.221 | 0.253 | 0.0013% |
| chr19_524287_C_T | chr19:524287 | -0.032 | -0.183 | -0.253 | <0.001% |
| chr19_531155_C_G | chr19:531155 | 0.143 | -0.001 | 0.024 | <0.001% |
| chr19_524203_G_A | chr19:524203 | -0.006 | -0.138 | -0.250 | 0.0013% |
| chr19_523994_A_C | chr19:523994 | 0.005 | 0.030 | 0.249 | 0.0027% |
| chr19_524158_G_A | chr19:524158 | 0.006 | -0.156 | -0.247 | 0.0013% |
| chr19_530825_A_C | chr19:530825 | 0.073 | 0.145 | 0.247 | 0.014% |
| chr19_530839_A_G | chr19:530839 | -0.140 | -0.121 | 0.200 | <0.001% |
| chr19_530850_G_C | chr19:530850 | 0.121 | 0.157 | 0.247 | <0.001% |
| chr19_530910_G_A | chr19:530910 | -0.140 | -0.096 | -0.035 | <0.001% |
| chr19_531068_C_T | chr19:531068 | -0.136 | -0.051 | -0.247 | <0.001% |
| chr19_531157_G_C | chr19:531157 | 0.140 | 0.075 | 0.047 | 8.96% |
| chr19_531170_G_A | chr19:531170 | -0.060 | 0.011 | -0.247 | — |
| chr19_531224_G_C | chr19:531224 | -0.017 | -0.030 | -0.247 | — |
| chr19_531226_G_T | chr19:531226 | 0.140 | 0.074 | 0.082 | — |
| chr19_531232_A_C | chr19:531232 | -0.033 | -0.025 | -0.247 | — |
| chr19_531286_A_C | chr19:531286 | -0.037 | -0.046 | -0.247 | — |
| chr19_531291_G_T | chr19:531291 | -0.013 | 0.022 | 0.247 | — |
| chr19_523995_A_C | chr19:523995 | 0.003 | 0.019 | 0.241 | 0.0033% |
| chr19_524275_C_G | chr19:524275 | 0.015 | 0.102 | 0.241 | 0.0020% |
| chr19_531134_G_A | chr19:531134 | -0.135 | -0.039 | -0.141 | 0.017% |
| chr19_524168_C_T | chr19:524168 | 0.041 | 0.197 | 0.235 | <0.001% |
| chr19_530987_T_C | chr19:530987 | 0.075 | 0.121 | 0.235 | <0.001% |
| chr19_531069_G_T | chr19:531069 | 0.133 | 0.010 | 0.106 | <0.001% |
| chr19_531165_G_A | chr19:531165 | -0.133 | -0.048 | -0.153 | — |
| chr19_531226_G_C | chr19:531226 | 0.133 | 0.051 | 0.012 | — |
| chr19_531295_C_G | chr19:531295 | 0.133 | 0.089 | 0.235 | — |
| chr19_531297_C_A | chr19:531297 | -0.023 | 0.058 | 0.235 | — |
| chr19_524564_C_G | chr19:524564 | 0.012 | -0.030 | 0.235 | <0.001% |
| chr19_518351_G_C | chr19:518351 | 0.052 | 0.043 | 0.232 | 0.0012% |
| chr19_524176_C_T | chr19:524176 | -0.049 | -0.231 | -0.229 | 0.0026% |
| chr19_524198_C_T | chr19:524198 | 0.009 | -0.001 | 0.229 | <0.001% |
| chr19_524276_G_C | chr19:524276 | -0.003 | -0.091 | -0.229 | <0.001% |
| chr19_531040_C_A | chr19:531040 | 0.130 | 0.029 | 0.094 | <0.001% |
| chr19_531153_A_G | chr19:531153 | -0.130 | 0.029 | -0.141 | — |
| chr19_531165_G_T | chr19:531165 | -0.130 | -0.019 | -0.176 | — |
| chr19_531288_A_C | chr19:531288 | 0.003 | -0.038 | -0.229 | — |
| chr19_518751_A_G | chr19:518751 | -0.040 | -0.030 | -0.227 | 0.0050% |
| chr19_518182_G_A | chr19:518182 | 0.045 | 0.042 | 0.226 | 0.0011% |
| chr19_518770_G_A | chr19:518770 | 0.030 | 0.036 | 0.224 | <0.001% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.