PRDM16

Scored variants near PRDM16

chr1:2,969,202..3,538,621, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr1_3066348_G_A	chr1:3066348	-1.000	-0.673	-1.000	0.0039%
chr1_3066352_G_A	chr1:3066352	-1.000	-0.655	-1.000	0.0013%
chr1_3066347_C_A	chr1:3066347	0.832	0.411	0.612	0.0013%
chr1_3012662_C_T	chr1:3012662	-0.443	-0.262	-1.000	<0.001%
chr1_3066345_C_T	chr1:3066345	-0.742	-0.421	-1.000	0.0046%
chr1_3012607_C_T	chr1:3012607	0.366	0.266	1.000	0.047%
chr1_3066340_G_A	chr1:3066340	-0.552	-0.355	-0.729	<0.001%
chr1_3031440_C_G	chr1:3031440	0.250	0.170	0.924	0.0013%
chr1_3012608_C_G	chr1:3012608	0.300	0.230	0.903	<0.001%
chr1_3070090_A_C	chr1:3070090	-0.055	-0.209	-0.876	<0.001%
chr1_3012599_C_T	chr1:3012599	0.265	0.203	0.850	<0.001%
chr1_3012650_G_C	chr1:3012650	-0.252	-0.160	-0.803	<0.001%
chr1_3066584_G_A	chr1:3066584	0.435	0.439	0.529	0.0013%
chr1_3070219_C_T	chr1:3070219	-0.193	-0.115	-0.765	0.0013%
chr1_3069869_G_A	chr1:3069869	0.015	0.146	0.735	0.0092%
chr1_3069778_C_T	chr1:3069778	-0.416	-0.039	-0.260	<0.001%
chr1_3012613_C_T	chr1:3012613	0.238	0.197	0.726	<0.001%
chr1_3069878_G_A	chr1:3069878	0.000	0.124	0.724	<0.001%
chr1_3061140_A_T	chr1:3061140	-0.246	-0.195	-0.688	<0.001%
chr1_3069897_A_G	chr1:3069897	-0.052	-0.160	-0.676	<0.001%
chr1_3069883_G_A	chr1:3069883	0.007	0.133	0.671	0.0020%
chr1_3012605_C_T	chr1:3012605	0.247	0.148	0.653	<0.001%
chr1_3070101_C_T	chr1:3070101	0.037	0.152	0.637	<0.001%
chr1_3061109_G_A	chr1:3061109	0.195	0.038	0.576	0.011%
chr1_3069886_G_A	chr1:3069886	0.005	0.110	0.565	<0.001%
chr1_3031182_G_C	chr1:3031182	0.156	0.141	0.547	0.014%
chr1_3069862_G_A	chr1:3069862	0.015	0.115	0.547	0.0013%
chr1_3070123_G_A	chr1:3070123	0.039	0.126	0.527	0.016%
chr1_3069889_G_A	chr1:3069889	-0.010	0.119	0.524	<0.001%
chr1_3069901_G_A	chr1:3069901	-0.027	0.113	0.512	<0.001%
chr1_3070085_C_A	chr1:3070085	0.030	0.126	0.502	<0.001%
chr1_3012609_C_A	chr1:3012609	0.169	0.103	0.494	0.0013%
chr1_3069647_A_C	chr1:3069647	-0.127	-0.088	-0.491	<0.001%
chr1_3012685_C_T	chr1:3012685	-0.204	-0.097	-0.491	0.018%
chr1_3070048_G_A	chr1:3070048	0.008	0.120	0.490	0.0085%
chr1_3070292_G_T	chr1:3070292	0.081	0.083	0.489	<0.001%
chr1_3061139_C_A	chr1:3061139	-0.170	-0.081	-0.488	<0.001%
chr1_3070111_G_A	chr1:3070111	0.024	0.125	0.487	0.0013%
chr1_3061159_A_T	chr1:3061159	0.271	0.124	0.312	0.0033%
chr1_3012614_C_T	chr1:3012614	0.174	0.110	0.465	0.067%
chr1_3069909_G_A	chr1:3069909	0.018	0.086	0.465	0.0013%
chr1_3012668_A_G	chr1:3012668	-0.181	-0.103	-0.459	<0.001%
chr1_3070120_C_A	chr1:3070120	0.008	0.112	0.453	0.0013%
chr1_3069900_G_A	chr1:3069900	0.008	0.098	0.447	<0.001%
chr1_3070122_C_T	chr1:3070122	0.027	0.092	0.439	0.0013%
chr1_3012623_C_A	chr1:3012623	0.159	0.107	0.438	<0.001%
chr1_3070110_C_T	chr1:3070110	0.008	0.096	0.430	0.0013%
chr1_3069979_A_C	chr1:3069979	0.018	0.091	0.429	0.0013%
chr1_3012609_C_G	chr1:3012609	0.131	0.092	0.426	0.035%
chr1_3012687_C_G	chr1:3012687	0.135	0.051	0.424	<0.001%
chr1_3031670_G_A	chr1:3031670	0.007	0.082	0.424	0.0026%
chr1_3070116_C_T	chr1:3070116	0.003	0.083	0.418	0.0013%
chr1_3066328_G_A	chr1:3066328	0.233	0.152	0.229	0.0033%
chr1_3069865_C_T	chr1:3069865	-0.002	0.084	0.412	0.022%
chr1_3069905_C_T	chr1:3069905	0.025	0.109	0.412	<0.001%
chr1_3070287_G_A	chr1:3070287	0.104	0.088	0.406	<0.001%
chr1_3069830_C_T	chr1:3069830	0.220	0.121	0.403	<0.001%
chr1_3070050_C_T	chr1:3070050	0.022	0.086	0.401	0.0046%
chr1_3031238_A_G	chr1:3031238	-0.007	-0.042	-0.400	0.0013%
chr1_3069840_G_A	chr1:3069840	0.025	0.084	0.400	0.0020%
chr1_3070099_C_A	chr1:3070099	0.007	0.089	0.399	<0.001%
chr1_3069844_G_A	chr1:3069844	0.037	0.088	0.397	<0.001%
chr1_3066347_C_T	chr1:3066347	0.220	0.112	0.271	0.0033%
chr1_3069837_G_A	chr1:3069837	0.016	0.083	0.388	<0.001%
chr1_3069899_G_T	chr1:3069899	0.017	0.107	0.388	0.0013%
chr1_3012597_C_T	chr1:3012597	0.067	0.075	0.385	0.0059%
chr1_3070317_G_T	chr1:3070317	0.092	0.063	0.384	<0.001%
chr1_3070076_G_A	chr1:3070076	0.011	0.070	0.379	<0.001%
chr1_3070100_C_T	chr1:3070100	0.024	0.116	0.376	0.0013%
chr1_3070118_G_A	chr1:3070118	0.005	0.089	0.365	<0.001%
chr1_3070085_C_T	chr1:3070085	-0.010	0.111	0.362	<0.001%
chr1_3070043_G_A	chr1:3070043	0.032	0.070	0.361	<0.001%
chr1_3069919_C_A	chr1:3069919	0.005	0.071	0.359	0.0020%
chr1_3012635_G_A	chr1:3012635	-0.116	-0.084	-0.356	0.237%
chr1_3070285_G_A	chr1:3070285	0.039	0.085	0.355	<0.001%
chr1_3070143_G_A	chr1:3070143	0.005	0.081	0.355	<0.001%
chr1_3070130_C_T	chr1:3070130	0.013	0.088	0.349	0.0013%
chr1_3012805_G_T	chr1:3012805	-0.003	-0.041	-0.347	<0.001%
chr1_3070282_G_A	chr1:3070282	0.030	0.071	0.345	0.0013%
chr1_3070046_C_T	chr1:3070046	0.012	0.100	0.344	0.0046%
chr1_3066399_T_C	chr1:3066399	-0.193	-0.234	-0.153	0.0013%
chr1_3070205_C_G	chr1:3070205	-0.090	-0.056	-0.335	0.0013%
chr1_3069618_G_A	chr1:3069618	0.131	0.087	0.334	0.0020%
chr1_3012602_C_T	chr1:3012602	0.092	0.091	0.329	0.0026%
chr1_3012695_C_G	chr1:3012695	-0.098	-0.046	-0.324	0.0020%
chr1_3070139_A_G	chr1:3070139	-0.024	-0.054	-0.322	<0.001%
chr1_3069619_G_C	chr1:3069619	0.084	0.065	0.320	0.0099%
chr1_3066320_T_C	chr1:3066320	-0.180	-0.185	-0.282	<0.001%
chr1_3070028_G_A	chr1:3070028	0.008	0.081	0.315	0.024%
chr1_3031661_G_C	chr1:3031661	0.126	0.082	0.312	<0.001%
chr1_3070299_C_A	chr1:3070299	0.032	0.055	0.310	2.50%
chr1_3070251_C_T	chr1:3070251	0.045	0.073	0.309	<0.001%
chr1_3031207_T_A	chr1:3031207	0.090	-0.004	0.306	0.757%
chr1_3070056_G_T	chr1:3070056	0.008	0.071	0.301	<0.001%
chr1_3070050_C_G	chr1:3070050	-0.002	0.053	0.296	<0.001%
chr1_3070055_C_T	chr1:3070055	-0.023	0.082	0.291	0.0046%
chr1_3012701_C_G	chr1:3012701	0.020	0.030	0.285	0.0033%
chr1_3070034_A_C	chr1:3070034	-0.010	-0.066	-0.284	<0.001%
chr1_3070073_G_C	chr1:3070073	-0.025	-0.066	-0.280	<0.001%
chr1_3066313_C_T	chr1:3066313	-0.158	-0.089	-0.194	0.0026%
chr1_3031182_G_A	chr1:3031182	0.055	0.025	0.276	0.0033%
chr1_3070293_G_A	chr1:3070293	0.035	0.052	0.274	<0.001%
chr1_3012822_A_C	chr1:3012822	0.048	0.046	0.274	0.0013%
chr1_3070065_T_C	chr1:3070065	0.032	-0.069	-0.274	0.0020%
chr1_3069851_G_C	chr1:3069851	0.065	-0.043	-0.271	<0.001%
chr1_3066396_G_A	chr1:3066396	0.140	0.464	0.218	<0.001%
chr1_3012767_A_G	chr1:3012767	0.091	0.030	0.268	<0.001%
chr1_3070184_C_T	chr1:3070184	0.039	0.048	0.263	0.0013%
chr1_3070168_C_A	chr1:3070168	-0.019	0.046	0.263	0.0033%
chr1_3066424_C_T	chr1:3066424	-0.148	-0.114	-0.212	0.017%
chr1_3070051_G_A	chr1:3070051	0.038	0.047	0.260	0.0013%
chr1_3069835_C_T	chr1:3069835	-0.027	0.060	0.259	0.0020%
chr1_3069619_G_A	chr1:3069619	0.048	0.055	0.256	0.012%
chr1_3031268_G_A	chr1:3031268	0.072	-0.037	0.253	<0.001%
chr1_3085781_G_T	chr1:3085781	0.098	0.117	0.253	<0.001%
chr1_3070112_C_T	chr1:3070112	-0.006	0.054	0.252	0.0046%
chr1_3061065_C_T	chr1:3061065	-0.141	-0.132	-0.088	<0.001%
chr1_3070113_C_T	chr1:3070113	-0.005	0.050	0.249	<0.001%
chr1_3031649_C_T	chr1:3031649	-0.027	-0.019	-0.247	<0.001%
chr1_3069924_G_A	chr1:3069924	0.018	0.061	0.247	<0.001%
chr1_3012625_C_T	chr1:3012625	0.081	0.052	0.244	<0.001%
chr1_3069809_C_T	chr1:3069809	0.002	0.067	0.243	0.0020%
chr1_3070370_G_T	chr1:3070370	0.072	0.045	0.242	<0.001%
chr1_3070083_C_G	chr1:3070083	0.002	-0.039	-0.240	<0.001%
chr1_3070238_G_C	chr1:3070238	0.075	0.052	0.238	<0.001%
chr1_3061061_C_T	chr1:3061061	0.133	0.053	0.124	0.0020%
chr1_3061189_C_A	chr1:3061189	-0.087	-0.056	-0.235	<0.001%
chr1_3066401_G_A	chr1:3066401	-0.133	-0.122	-0.100	<0.001%
chr1_3070349_C_T	chr1:3070349	0.036	0.037	0.233	<0.001%
chr1_3012603_C_A	chr1:3012603	0.065	0.057	0.226	0.0013%
chr1_3066388_G_C	chr1:3066388	-0.126	-0.129	-0.106	0.0013%
chr1_3066468_T_G	chr1:3066468	-0.126	-0.122	-0.106	0.037%
chr1_3069921_G_A	chr1:3069921	0.005	0.039	0.224	0.0046%
chr1_3069759_G_C	chr1:3069759	0.125	0.006	0.150	<0.001%
chr1_3061059_G_A	chr1:3061059	-0.125	-0.128	0.024	0.0013%
chr1_3070330_C_T	chr1:3070330	-0.012	0.031	0.219	0.0087%
chr1_3012686_C_T	chr1:3012686	0.083	0.031	0.218	0.0013%
chr1_3070374_C_T	chr1:3070374	0.033	0.038	0.218	<0.001%
chr1_3066305_C_T	chr1:3066305	0.121	0.089	0.153	<0.001%
chr1_3066467_G_A	chr1:3066467	-0.121	-0.036	-0.141	0.0033%
chr1_3086046_C_T	chr1:3086046	0.121	0.133	0.141	30.5%
chr1_3012592_C_T	chr1:3012592	0.065	0.048	0.212	<0.001%
chr1_3012765_G_T	chr1:3012765	0.105	0.040	0.212	0.0013%
chr1_3069789_C_A	chr1:3069789	-0.120	-0.008	-0.066	<0.001%
chr1_3069816_A_G	chr1:3069816	0.016	-0.038	-0.212	0.076%
chr1_3070164_C_T	chr1:3070164	0.010	0.049	0.210	<0.001%
chr1_3070330_C_A	chr1:3070330	-0.003	0.032	0.205	0.0013%
chr1_3070241_C_T	chr1:3070241	0.015	0.047	0.204	0.0066%
chr1_3070066_C_T	chr1:3070066	-0.032	0.036	0.204	0.0013%
chr1_3012831_C_T	chr1:3012831	0.028	0.043	0.203	0.0092%
chr1_3069610_G_C	chr1:3069610	0.073	0.033	0.200	0.025%
chr1_3061168_A_C	chr1:3061168	0.072	0.025	0.200	<0.001%
chr1_3066475_C_G	chr1:3066475	0.113	0.112	0.082	<0.001%
chr1_3066654_A_T	chr1:3066654	-0.058	-0.074	-0.200	<0.001%
chr1_3069896_C_G	chr1:3069896	0.025	0.005	0.200	<0.001%
chr1_3070189_C_T	chr1:3070189	0.018	0.035	0.199	0.0026%
chr1_3070031_G_T	chr1:3070031	0.032	0.076	0.199	<0.001%
chr1_3070144_C_T	chr1:3070144	0.019	0.038	0.198	<0.001%
chr1_3070136_T_C	chr1:3070136	0.007	-0.040	-0.196	<0.001%
chr1_3070347_C_A	chr1:3070347	0.037	0.030	0.196	<0.001%
chr1_3070013_G_A	chr1:3070013	-0.005	0.040	0.196	<0.001%
chr1_3070278_C_T	chr1:3070278	0.027	0.039	0.196	<0.001%
chr1_3061199_G_A	chr1:3061199	-0.082	-0.048	-0.194	0.0020%
chr1_3070256_G_A	chr1:3070256	-0.021	0.050	0.190	0.0013%
chr1_3012684_G_A	chr1:3012684	-0.086	-0.031	-0.182	0.0053%
chr1_3012867_C_T	chr1:3012867	0.095	0.041	0.182	0.0013%
chr1_3031271_C_A	chr1:3031271	-0.024	-0.051	-0.182	0.0013%
chr1_3069791_C_A	chr1:3069791	-0.103	0.012	-0.047	<0.001%
chr1_3012674_T_C	chr1:3012674	-0.095	-0.041	-0.179	0.0020%
chr1_3070359_C_T	chr1:3070359	0.047	0.026	0.177	0.0014%
chr1_3066540_A_T	chr1:3066540	0.100	0.117	0.094	0.0020%
chr1_3066613_C_A	chr1:3066613	0.100	0.122	0.153	<0.001%
chr1_3070355_G_A	chr1:3070355	0.023	0.027	0.176	<0.001%
chr1_3061066_C_T	chr1:3061066	-0.099	-0.102	-0.065	<0.001%
chr1_3012648_G_C	chr1:3012648	-0.061	-0.030	-0.174	<0.001%
chr1_3012868_C_T	chr1:3012868	0.073	0.041	0.174	<0.001%
chr1_3061030_G_T	chr1:3061030	0.098	0.096	-0.059	<0.001%
chr1_3066299_G_A	chr1:3066299	-0.098	-0.046	-0.135	2.14%
chr1_3012780_G_C	chr1:3012780	0.097	0.045	-0.041	<0.001%
chr1_3012831_C_A	chr1:3012831	0.047	0.069	0.171	<0.001%
chr1_3066456_G_A	chr1:3066456	-0.097	-0.084	-0.141	<0.001%
chr1_3066610_T_C	chr1:3066610	-0.097	-0.071	-0.129	<0.001%
chr1_3070314_C_T	chr1:3070314	0.000	0.030	0.171	0.0027%
chr1_3070014_C_A	chr1:3070014	-0.008	0.036	0.168	<0.001%
chr1_3070149_C_T	chr1:3070149	0.012	0.042	0.167	0.0020%
chr1_3066285_C_T	chr1:3066285	-0.073	-0.061	-0.165	<0.001%
chr1_3070073_G_T	chr1:3070073	-0.017	0.022	0.165	0.0039%
chr1_3069620_G_T	chr1:3069620	0.013	0.043	0.164	0.0013%
chr1_3012669_G_A	chr1:3012669	-0.065	-0.025	-0.162	<0.001%
chr1_3066324_C_T	chr1:3066324	0.092	-0.003	0.018	0.0039%
chr1_3070059_A_T	chr1:3070059	-0.020	-0.022	-0.160	0.214%
chr1_3070075_G_A	chr1:3070075	0.032	0.028	0.160	0.0079%
chr1_3012789_G_C	chr1:3012789	-0.090	-0.051	-0.068	0.0013%
chr1_3066299_G_C	chr1:3066299	-0.075	-0.043	-0.159	<0.001%
chr1_3066425_G_A	chr1:3066425	-0.090	-0.056	-0.124	0.0013%
chr1_3066482_G_A	chr1:3066482	0.090	0.030	-0.153	<0.001%
chr1_3066369_C_T	chr1:3066369	0.088	0.000	0.000	<0.001%
chr1_3070259_C_A	chr1:3070259	0.031	0.026	0.156	0.110%
chr1_3070346_G_A	chr1:3070346	0.017	0.025	0.154	<0.001%
chr1_3066307_T_C	chr1:3066307	-0.087	0.000	-0.053	<0.001%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.