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PRPF4
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near PRPF4
chr9:113,175,657..113,392,905, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr9_113221418_C_T | chr9:113221418 | 1.000 | 0.843 | 0.929 | <0.001% |
| chr9_113221456_G_C | chr9:113221456 | 1.000 | 0.571 | 0.306 | — |
| chr9_113221405_G_A | chr9:113221405 | 1.000 | 0.721 | 0.906 | — |
| chr9_113221405_G_T | chr9:113221405 | 0.913 | 0.576 | 0.847 | — |
| chr9_113221408_G_A | chr9:113221408 | 0.712 | 0.350 | 0.647 | — |
| chr9_113221411_G_T | chr9:113221411 | 0.661 | 0.444 | 0.682 | — |
| chr9_113221540_C_G | chr9:113221540 | -0.459 | -0.467 | -1.000 | — |
| chr9_113221541_G_C | chr9:113221541 | -0.105 | 0.779 | 1.000 | — |
| chr9_113221455_C_G | chr9:113221455 | 0.531 | 0.264 | -0.094 | — |
| chr9_113221532_G_T | chr9:113221532 | 0.090 | 0.571 | 0.929 | — |
| chr9_113221405_G_C | chr9:113221405 | 0.521 | 0.251 | 0.706 | — |
| chr9_113221533_G_T | chr9:113221533 | 0.180 | 0.546 | 0.906 | — |
| chr9_113221539_G_A | chr9:113221539 | 0.115 | 0.680 | 0.906 | — |
| chr9_113221408_G_C | chr9:113221408 | 0.496 | 0.259 | 0.553 | — |
| chr9_113221541_G_T | chr9:113221541 | 0.240 | 0.518 | 0.859 | — |
| chr9_113221404_A_C | chr9:113221404 | 0.481 | 0.221 | 0.435 | — |
| chr9_113221531_G_A | chr9:113221531 | 0.163 | 0.586 | 0.847 | — |
| chr9_113221404_A_T | chr9:113221404 | 0.474 | 0.246 | 0.459 | — |
| chr9_113221534_A_G | chr9:113221534 | -0.285 | -0.292 | -0.835 | — |
| chr9_113221406_G_T | chr9:113221406 | 0.471 | 0.239 | 0.494 | — |
| chr9_113221541_G_A | chr9:113221541 | 0.013 | 0.718 | 0.824 | — |
| chr9_113221443_A_T | chr9:113221443 | -0.240 | 0.096 | 0.812 | — |
| chr9_113221532_G_C | chr9:113221532 | -0.010 | 0.556 | 0.812 | — |
| chr9_113221533_G_C | chr9:113221533 | 0.032 | 0.470 | 0.812 | — |
| chr9_113221406_G_C | chr9:113221406 | 0.446 | 0.102 | 0.412 | — |
| chr9_113221533_G_A | chr9:113221533 | 0.053 | 0.571 | 0.788 | — |
| chr9_113221531_G_C | chr9:113221531 | 0.185 | 0.556 | 0.776 | <0.001% |
| chr9_113221425_G_T | chr9:113221425 | -0.416 | -0.043 | -0.341 | — |
| chr9_113221538_G_T | chr9:113221538 | 0.161 | 0.467 | 0.729 | — |
| chr9_113221539_G_T | chr9:113221539 | 0.175 | 0.449 | 0.729 | — |
| chr9_113221539_G_C | chr9:113221539 | 0.220 | 0.515 | 0.718 | — |
| chr9_113221528_G_T | chr9:113221528 | 0.195 | 0.513 | 0.694 | — |
| chr9_113221529_G_C | chr9:113221529 | 0.190 | 0.442 | 0.694 | — |
| chr9_113221529_G_T | chr9:113221529 | 0.143 | 0.464 | 0.694 | — |
| chr9_113221409_G_A | chr9:113221409 | 0.323 | 0.074 | 0.682 | — |
| chr9_113221528_G_C | chr9:113221528 | 0.170 | 0.505 | 0.682 | — |
| chr9_113221457_T_G | chr9:113221457 | -0.293 | -0.076 | -0.659 | — |
| chr9_113221532_G_A | chr9:113221532 | -0.058 | 0.530 | 0.659 | — |
| chr9_113275692_C_T | chr9:113275692 | 0.037 | 0.053 | -0.659 | <0.001% |
| chr9_113275578_C_G | chr9:113275578 | -0.093 | 0.010 | 0.647 | — |
| chr9_113221527_G_T | chr9:113221527 | 0.161 | 0.543 | 0.635 | — |
| chr9_113221531_G_T | chr9:113221531 | 0.058 | 0.454 | 0.635 | — |
| chr9_113221528_G_A | chr9:113221528 | 0.196 | 0.487 | 0.624 | — |
| chr9_113221529_G_A | chr9:113221529 | 0.141 | 0.409 | 0.624 | — |
| chr9_113275578_C_A | chr9:113275578 | -0.045 | -0.056 | 0.624 | — |
| chr9_113221426_A_T | chr9:113221426 | -0.346 | -0.030 | -0.188 | — |
| chr9_113221527_G_A | chr9:113221527 | 0.251 | 0.459 | 0.612 | — |
| chr9_113221534_A_T | chr9:113221534 | -0.181 | -0.305 | -0.612 | — |
| chr9_113221433_C_T | chr9:113221433 | 0.092 | 0.152 | 0.600 | — |
| chr9_113221538_G_A | chr9:113221538 | 0.052 | 0.503 | 0.600 | <0.001% |
| chr9_113221438_G_T | chr9:113221438 | -0.329 | 0.117 | 0.094 | — |
| chr9_113221537_G_A | chr9:113221537 | 0.158 | 0.586 | 0.576 | — |
| chr9_113275646_C_T | chr9:113275646 | -0.183 | -0.058 | -0.576 | — |
| chr9_113275678_G_A | chr9:113275678 | -0.047 | -0.041 | 0.576 | — |
| chr9_113221410_G_A | chr9:113221410 | -0.319 | -0.173 | -0.247 | — |
| chr9_113221453_G_T | chr9:113221453 | 0.319 | 0.226 | 0.200 | — |
| chr9_113221527_G_C | chr9:113221527 | 0.201 | 0.520 | 0.565 | — |
| chr9_113275645_T_C | chr9:113275645 | -0.185 | -0.056 | -0.541 | — |
| chr9_113221415_A_C | chr9:113221415 | -0.303 | -0.084 | -0.188 | — |
| chr9_113221439_C_A | chr9:113221439 | -0.240 | -0.074 | -0.529 | — |
| chr9_113221453_G_A | chr9:113221453 | 0.288 | 0.096 | -0.212 | — |
| chr9_113221429_C_G | chr9:113221429 | 0.072 | 0.066 | 0.506 | — |
| chr9_113221456_G_T | chr9:113221456 | 0.200 | -0.053 | -0.506 | — |
| chr9_113275681_C_T | chr9:113275681 | -0.057 | -0.033 | 0.506 | 0.225% |
| chr9_113275629_T_A | chr9:113275629 | -0.280 | -0.074 | -0.094 | <0.001% |
| chr9_113275646_C_A | chr9:113275646 | -0.156 | -0.028 | -0.494 | — |
| chr9_113221434_G_C | chr9:113221434 | 0.271 | 0.063 | 0.047 | <0.001% |
| chr9_113221540_C_A | chr9:113221540 | 0.271 | 0.241 | 0.459 | — |
| chr9_113275558_G_C | chr9:113275558 | -0.266 | -0.013 | -0.294 | — |
| chr9_113275647_C_T | chr9:113275647 | -0.123 | -0.048 | -0.471 | — |
| chr9_113275514_C_A | chr9:113275514 | 0.261 | 0.094 | 0.000 | — |
| chr9_113221407_T_C | chr9:113221407 | -0.260 | -0.223 | -0.318 | — |
| chr9_113275527_T_G | chr9:113275527 | -0.260 | -0.107 | -0.035 | — |
| chr9_113221413_A_G | chr9:113221413 | -0.255 | -0.178 | -0.106 | — |
| chr9_113221406_G_A | chr9:113221406 | 0.251 | 0.094 | 0.282 | — |
| chr9_113275604_G_T | chr9:113275604 | 0.250 | 0.419 | 0.212 | <0.001% |
| chr9_113221426_A_G | chr9:113221426 | -0.248 | -0.056 | 0.165 | — |
| chr9_113221413_A_C | chr9:113221413 | -0.246 | -0.170 | -0.047 | — |
| chr9_113221452_T_A | chr9:113221452 | -0.017 | -0.086 | -0.435 | — |
| chr9_113221507_G_T | chr9:113221507 | 0.160 | 0.180 | 0.435 | — |
| chr9_113221536_G_A | chr9:113221536 | 0.000 | 0.464 | 0.424 | — |
| chr9_113275647_C_A | chr9:113275647 | -0.143 | -0.041 | -0.424 | — |
| chr9_113275647_C_G | chr9:113275647 | -0.108 | -0.030 | -0.424 | — |
| chr9_113275661_C_A | chr9:113275661 | 0.238 | 0.173 | 0.282 | — |
| chr9_113221446_G_C | chr9:113221446 | 0.236 | 0.117 | 0.059 | — |
| chr9_113275524_A_G | chr9:113275524 | -0.236 | -0.081 | -0.176 | — |
| chr9_113221452_T_C | chr9:113221452 | -0.140 | -0.127 | -0.412 | — |
| chr9_113275646_C_G | chr9:113275646 | -0.115 | -0.028 | -0.412 | — |
| chr9_113221408_G_T | chr9:113221408 | 0.231 | 0.053 | 0.271 | — |
| chr9_113221415_A_T | chr9:113221415 | -0.230 | -0.036 | -0.094 | — |
| chr9_113221440_A_T | chr9:113221440 | -0.150 | -0.038 | -0.400 | 0.0086% |
| chr9_113221455_C_A | chr9:113221455 | 0.211 | -0.046 | -0.400 | — |
| chr9_113221459_A_C | chr9:113221459 | -0.205 | -0.056 | -0.400 | — |
| chr9_113221459_A_G | chr9:113221459 | -0.218 | -0.061 | -0.400 | — |
| chr9_113275644_T_C | chr9:113275644 | -0.140 | -0.003 | -0.400 | — |
| chr9_113275645_T_A | chr9:113275645 | -0.165 | 0.005 | -0.400 | — |
| chr9_113275579_C_G | chr9:113275579 | -0.225 | -0.426 | 0.329 | — |
| chr9_113221413_A_T | chr9:113221413 | -0.223 | -0.168 | -0.176 | — |
| chr9_113221423_G_A | chr9:113221423 | 0.221 | 0.135 | 0.165 | <0.001% |
| chr9_113221454_A_C | chr9:113221454 | 0.221 | -0.058 | -0.306 | — |
| chr9_113221530_C_A | chr9:113221530 | 0.221 | 0.221 | 0.247 | — |
| chr9_113275688_C_G | chr9:113275688 | -0.221 | -0.051 | -0.047 | — |
| chr9_113221414_A_T | chr9:113221414 | -0.220 | -0.152 | -0.129 | — |
| chr9_113221441_C_G | chr9:113221441 | -0.145 | -0.025 | -0.388 | — |
| chr9_113275509_G_T | chr9:113275509 | -0.220 | -0.218 | -0.200 | — |
| chr9_113275654_T_A | chr9:113275654 | 0.126 | -0.145 | -0.388 | — |
| chr9_113275676_G_C | chr9:113275676 | -0.018 | -0.048 | 0.388 | — |
| chr9_113275541_C_A | chr9:113275541 | 0.218 | 0.330 | 0.212 | — |
| chr9_113275672_C_G | chr9:113275672 | -0.215 | -0.079 | -0.071 | <0.001% |
| chr9_113221439_C_G | chr9:113221439 | -0.161 | -0.020 | -0.376 | — |
| chr9_113221439_C_T | chr9:113221439 | -0.123 | 0.033 | -0.376 | — |
| chr9_113221460_G_T | chr9:113221460 | 0.198 | 0.020 | 0.376 | — |
| chr9_113275628_C_G | chr9:113275628 | -0.213 | -0.145 | 0.329 | — |
| chr9_113275649_G_A | chr9:113275649 | -0.088 | 0.010 | -0.376 | — |
| chr9_113221419_A_T | chr9:113221419 | 0.211 | 0.213 | 0.212 | — |
| chr9_113221435_C_T | chr9:113221435 | -0.211 | 0.028 | 0.294 | 0.0080% |
| chr9_113221459_A_T | chr9:113221459 | -0.211 | -0.061 | -0.353 | — |
| chr9_113221416_G_T | chr9:113221416 | -0.208 | -0.218 | -0.271 | — |
| chr9_113275701_A_G | chr9:113275701 | -0.208 | -0.061 | -0.259 | — |
| chr9_113221441_C_A | chr9:113221441 | -0.058 | 0.081 | -0.365 | <0.001% |
| chr9_113275560_C_G | chr9:113275560 | -0.070 | -0.109 | -0.365 | — |
| chr9_113275645_T_G | chr9:113275645 | -0.156 | -0.028 | -0.365 | — |
| chr9_113275648_T_A | chr9:113275648 | -0.175 | -0.010 | -0.365 | — |
| chr9_113275657_C_A | chr9:113275657 | -0.002 | -0.168 | -0.365 | — |
| chr9_113221484_G_T | chr9:113221484 | -0.205 | 0.137 | 0.059 | — |
| chr9_113221438_G_C | chr9:113221438 | -0.201 | -0.008 | -0.188 | — |
| chr9_113221424_A_T | chr9:113221424 | 0.198 | 0.129 | 0.235 | — |
| chr9_113221418_C_A | chr9:113221418 | -0.196 | -0.117 | -0.176 | — |
| chr9_113275540_G_T | chr9:113275540 | 0.196 | 0.071 | 0.071 | <0.001% |
| chr9_113275557_C_T | chr9:113275557 | -0.196 | -0.155 | -0.247 | — |
| chr9_113221432_G_A | chr9:113221432 | 0.128 | 0.201 | 0.341 | — |
| chr9_113221437_G_A | chr9:113221437 | -0.193 | -0.127 | -0.094 | — |
| chr9_113221440_A_G | chr9:113221440 | -0.193 | -0.010 | -0.318 | — |
| chr9_113221457_T_C | chr9:113221457 | -0.038 | -0.015 | -0.341 | — |
| chr9_113221420_A_T | chr9:113221420 | -0.188 | 0.069 | 0.000 | — |
| chr9_113275620_G_A | chr9:113275620 | 0.188 | 0.381 | 0.188 | <0.001% |
| chr9_113221440_A_C | chr9:113221440 | -0.116 | -0.003 | -0.329 | — |
| chr9_113221484_G_C | chr9:113221484 | -0.186 | 0.135 | 0.094 | — |
| chr9_113275515_T_G | chr9:113275515 | 0.186 | 0.284 | 0.094 | — |
| chr9_113275518_T_A | chr9:113275518 | 0.155 | 0.020 | 0.329 | — |
| chr9_113275643_C_A | chr9:113275643 | 0.043 | 0.041 | -0.329 | — |
| chr9_113275643_C_G | chr9:113275643 | -0.092 | -0.038 | -0.329 | — |
| chr9_113275679_C_T | chr9:113275679 | 0.053 | 0.023 | 0.329 | <0.001% |
| chr9_113221484_G_A | chr9:113221484 | -0.185 | 0.168 | 0.012 | — |
| chr9_113275639_C_A | chr9:113275639 | 0.185 | -0.109 | -0.235 | — |
| chr9_113221537_G_T | chr9:113221537 | 0.013 | 0.558 | 0.118 | — |
| chr9_113275640_G_T | chr9:113275640 | 0.183 | 0.053 | 0.082 | — |
| chr9_113221420_A_C | chr9:113221420 | -0.181 | 0.094 | 0.247 | — |
| chr9_113221427_G_T | chr9:113221427 | -0.181 | -0.127 | -0.224 | — |
| chr9_113221452_T_G | chr9:113221452 | 0.047 | -0.117 | -0.318 | — |
| chr9_113221481_G_C | chr9:113221481 | -0.180 | 0.028 | -0.118 | — |
| chr9_113221530_C_G | chr9:113221530 | 0.110 | -0.023 | -0.318 | — |
| chr9_113221536_G_T | chr9:113221536 | 0.037 | 0.259 | 0.318 | — |
| chr9_113275522_G_T | chr9:113275522 | -0.180 | -0.104 | -0.118 | — |
| chr9_113275654_T_G | chr9:113275654 | 0.180 | -0.173 | -0.282 | <0.001% |
| chr9_113221426_A_C | chr9:113221426 | -0.178 | -0.084 | -0.071 | <0.001% |
| chr9_113221470_G_T | chr9:113221470 | -0.178 | -0.094 | -0.165 | — |
| chr9_113221537_G_C | chr9:113221537 | 0.052 | 0.541 | 0.306 | — |
| chr9_113275521_T_G | chr9:113275521 | 0.176 | 0.297 | 0.047 | — |
| chr9_113221407_T_A | chr9:113221407 | -0.175 | -0.109 | -0.188 | — |
| chr9_113221422_T_C | chr9:113221422 | 0.175 | 0.069 | 0.153 | — |
| chr9_113221432_G_C | chr9:113221432 | 0.175 | 0.119 | 0.129 | — |
| chr9_113221485_G_A | chr9:113221485 | -0.175 | 0.117 | 0.024 | — |
| chr9_113275509_G_A | chr9:113275509 | -0.175 | -0.246 | -0.165 | — |
| chr9_113221435_C_A | chr9:113221435 | 0.070 | 0.251 | 0.306 | — |
| chr9_113221481_G_A | chr9:113221481 | -0.173 | 0.005 | -0.153 | — |
| chr9_113221536_G_C | chr9:113221536 | 0.032 | 0.345 | 0.306 | — |
| chr9_113275509_G_C | chr9:113275509 | -0.173 | -0.185 | -0.165 | — |
| chr9_113275676_G_A | chr9:113275676 | 0.063 | -0.023 | 0.306 | <0.001% |
| chr9_113275678_G_C | chr9:113275678 | 0.090 | 0.018 | 0.306 | — |
| chr9_113221417_G_A | chr9:113221417 | -0.171 | -0.063 | -0.188 | — |
| chr9_113221512_G_A | chr9:113221512 | 0.170 | -0.041 | 0.188 | — |
| chr9_113221538_G_C | chr9:113221538 | 0.048 | 0.518 | 0.000 | — |
| chr9_113275541_C_G | chr9:113275541 | 0.170 | 0.206 | 0.106 | — |
| chr9_113275544_C_T | chr9:113275544 | 0.170 | 0.142 | 0.176 | <0.001% |
| chr9_113275664_C_G | chr9:113275664 | 0.170 | 0.063 | 0.271 | — |
| chr9_113221433_C_A | chr9:113221433 | 0.168 | 0.127 | 0.200 | — |
| chr9_113275656_A_T | chr9:113275656 | 0.168 | -0.061 | -0.118 | — |
| chr9_113221409_G_C | chr9:113221409 | 0.048 | -0.137 | 0.294 | — |
| chr9_113275559_C_A | chr9:113275559 | -0.088 | -0.043 | -0.294 | — |
| chr9_113275571_A_G | chr9:113275571 | 0.095 | -0.145 | 0.294 | — |
| chr9_113275679_C_A | chr9:113275679 | 0.131 | 0.015 | 0.294 | — |
| chr9_113275541_C_T | chr9:113275541 | 0.165 | 0.173 | 0.071 | — |
| chr9_113275579_C_A | chr9:113275579 | -0.165 | -0.297 | 0.153 | — |
| chr9_113275539_T_A | chr9:113275539 | -0.163 | -0.102 | -0.024 | — |
| chr9_113221437_G_C | chr9:113221437 | -0.161 | -0.094 | -0.200 | — |
| chr9_113221451_G_T | chr9:113221451 | -0.161 | 0.127 | -0.200 | — |
| chr9_113275663_T_C | chr9:113275663 | 0.161 | -0.023 | 0.047 | — |
| chr9_113221442_G_A | chr9:113221442 | 0.068 | 0.183 | -0.282 | — |
| chr9_113221478_C_G | chr9:113221478 | 0.160 | 0.046 | 0.082 | — |
| chr9_113275534_A_T | chr9:113275534 | -0.160 | -0.081 | -0.035 | — |
| chr9_113275560_C_T | chr9:113275560 | -0.015 | -0.010 | -0.282 | — |
| chr9_113275578_C_T | chr9:113275578 | -0.065 | -0.155 | 0.282 | — |
| chr9_113275642_A_T | chr9:113275642 | -0.033 | -0.058 | -0.282 | — |
| chr9_113275655_G_A | chr9:113275655 | 0.115 | -0.178 | -0.282 | — |
| chr9_113275660_A_T | chr9:113275660 | 0.078 | -0.096 | -0.282 | — |
| chr9_113275693_T_G | chr9:113275693 | 0.007 | 0.046 | 0.282 | <0.001% |
| chr9_113221509_T_A | chr9:113221509 | -0.156 | -0.185 | -0.059 | — |
| chr9_113221516_G_A | chr9:113221516 | 0.155 | 0.079 | 0.024 | — |
| chr9_113221424_A_C | chr9:113221424 | 0.125 | 0.061 | 0.271 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.