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PTDSS2
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near PTDSS2
chr11:348,267..591,400, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr11_356049_G_C | chr11:356049 | -1.000 | -0.706 | -0.776 | — |
| chr11_356050_G_C | chr11:356050 | -1.000 | -0.652 | -0.824 | — |
| chr11_353664_G_T | chr11:353664 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr11_356046_G_T | chr11:356046 | -1.000 | -0.532 | -0.647 | — |
| chr11_356109_G_C | chr11:356109 | -1.000 | -0.307 | -0.418 | — |
| chr11_356050_G_A | chr11:356050 | -1.000 | -0.589 | -0.753 | — |
| chr11_353519_C_T | chr11:353519 | 1.000 | 0.596 | 1.000 | <0.001% |
| chr11_356108_T_G | chr11:356108 | -1.000 | -0.192 | -0.900 | — |
| chr11_356047_G_C | chr11:356047 | -1.000 | -0.533 | -0.671 | — |
| chr11_353543_G_A | chr11:353543 | 1.000 | 0.546 | 1.000 | 5.75% |
| chr11_356046_G_A | chr11:356046 | -1.000 | -0.556 | -0.647 | <0.001% |
| chr11_356007_A_G | chr11:356007 | -1.000 | -0.523 | -0.776 | <0.001% |
| chr11_356008_G_T | chr11:356008 | -1.000 | -0.563 | -0.818 | — |
| chr11_356047_G_T | chr11:356047 | -1.000 | -0.456 | -0.682 | — |
| chr11_356380_G_A | chr11:356380 | -1.000 | -0.256 | -1.000 | 0.0045% |
| chr11_356046_G_C | chr11:356046 | -1.000 | -0.510 | -0.706 | — |
| chr11_356107_G_A | chr11:356107 | -1.000 | -0.298 | -0.359 | — |
| chr11_356008_G_C | chr11:356008 | -1.000 | -0.505 | -0.676 | — |
| chr11_356049_G_A | chr11:356049 | -1.000 | -0.485 | -0.447 | — |
| chr11_353701_T_G | chr11:353701 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr11_356047_G_A | chr11:356047 | -1.000 | -0.414 | -0.647 | — |
| chr11_356106_G_A | chr11:356106 | -1.000 | -0.255 | -0.282 | — |
| chr11_356104_G_C | chr11:356104 | -1.000 | -0.242 | -0.235 | — |
| chr11_356051_G_C | chr11:356051 | -1.000 | -0.383 | -0.529 | — |
| chr11_353697_G_C | chr11:353697 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr11_356053_C_G | chr11:356053 | -1.000 | -0.242 | -0.906 | — |
| chr11_356106_G_T | chr11:356106 | -1.000 | -0.160 | -0.241 | — |
| chr11_356048_C_G | chr11:356048 | -1.000 | -0.140 | -0.859 | — |
| chr11_355996_G_A | chr11:355996 | -0.988 | -0.495 | -0.688 | 0.011% |
| chr11_356107_G_C | chr11:356107 | -0.980 | -0.192 | -0.194 | — |
| chr11_356049_G_T | chr11:356049 | -0.975 | -0.464 | -0.353 | — |
| chr11_356105_G_T | chr11:356105 | -0.967 | -0.230 | -0.141 | 0.0020% |
| chr11_355990_T_C | chr11:355990 | -0.955 | -0.239 | -0.418 | 0.012% |
| chr11_356092_C_A | chr11:356092 | -0.955 | -0.400 | -0.471 | — |
| chr11_356107_G_T | chr11:356107 | -0.952 | -0.183 | -0.224 | — |
| chr11_356045_G_T | chr11:356045 | -0.947 | -0.335 | -0.376 | — |
| chr11_364642_C_A | chr11:364642 | -0.785 | -0.481 | -1.000 | <0.001% |
| chr11_355998_C_G | chr11:355998 | -0.940 | -0.312 | -0.524 | <0.001% |
| chr11_356110_G_A | chr11:356110 | -0.930 | -0.119 | -0.271 | — |
| chr11_355997_G_A | chr11:355997 | -0.920 | -0.435 | -0.665 | 0.0013% |
| chr11_356106_G_C | chr11:356106 | -0.900 | -0.156 | -0.082 | — |
| chr11_356105_G_A | chr11:356105 | -0.899 | -0.199 | -0.159 | 0.014% |
| chr11_356007_A_T | chr11:356007 | -0.885 | -0.442 | -0.594 | — |
| chr11_356010_A_T | chr11:356010 | 0.885 | 1.000 | 1.000 | — |
| chr11_353486_C_T | chr11:353486 | -0.882 | -0.297 | -0.594 | 0.0098% |
| chr11_356052_G_T | chr11:356052 | -0.864 | -0.288 | -0.412 | — |
| chr11_356112_G_C | chr11:356112 | -0.857 | -0.141 | -0.294 | — |
| chr11_353463_C_T | chr11:353463 | 0.854 | 0.695 | 0.594 | 0.0046% |
| chr11_356396_G_A | chr11:356396 | -0.852 | -0.374 | -0.765 | 0.0032% |
| chr11_356110_G_C | chr11:356110 | -0.840 | -0.047 | -0.065 | — |
| chr11_356052_G_C | chr11:356052 | -0.814 | -0.293 | -0.447 | — |
| chr11_353477_G_T | chr11:353477 | -0.809 | -0.418 | -0.665 | <0.001% |
| chr11_356062_G_T | chr11:356062 | -0.809 | -0.326 | -0.506 | — |
| chr11_364639_C_A | chr11:364639 | -0.641 | -0.392 | -1.000 | <0.001% |
| chr11_353479_C_T | chr11:353479 | -0.797 | -0.392 | -0.771 | <0.001% |
| chr11_356051_G_T | chr11:356051 | -0.792 | -0.211 | -0.224 | — |
| chr11_356105_G_C | chr11:356105 | -0.787 | -0.208 | -0.012 | — |
| chr11_356183_G_C | chr11:356183 | 0.368 | 0.283 | 1.000 | <0.001% |
| chr11_356182_G_C | chr11:356182 | 0.316 | 0.391 | 1.000 | 0.0069% |
| chr11_356185_G_A | chr11:356185 | 0.391 | 0.330 | 1.000 | 0.0026% |
| chr11_356007_A_C | chr11:356007 | -0.754 | -0.246 | -0.371 | — |
| chr11_356104_G_A | chr11:356104 | -0.745 | -0.147 | -0.082 | — |
| chr11_356103_G_T | chr11:356103 | -0.737 | -0.162 | -0.053 | — |
| chr11_364639_C_T | chr11:364639 | -0.612 | -0.346 | -1.000 | 0.0013% |
| chr11_356103_G_C | chr11:356103 | -0.720 | -0.140 | -0.029 | — |
| chr11_353630_G_A | chr11:353630 | -0.712 | -0.774 | -0.818 | 7.22% |
| chr11_356140_G_C | chr11:356140 | -0.710 | -0.085 | -0.218 | — |
| chr11_356052_G_A | chr11:356052 | -0.704 | -0.198 | -0.318 | — |
| chr11_356045_G_C | chr11:356045 | -0.702 | -0.209 | -0.329 | — |
| chr11_356070_A_T | chr11:356070 | 0.686 | 0.466 | 0.729 | — |
| chr11_356062_G_C | chr11:356062 | -0.672 | -0.164 | -0.282 | — |
| chr11_356113_C_G | chr11:356113 | -0.672 | -0.019 | -0.635 | — |
| chr11_368490_C_A | chr11:368490 | 0.502 | 0.284 | 1.000 | <0.001% |
| chr11_356391_C_A | chr11:356391 | -0.659 | -0.235 | -0.835 | 0.0011% |
| chr11_356092_C_G | chr11:356092 | -0.652 | -0.273 | -0.253 | — |
| chr11_356017_T_C | chr11:356017 | -0.646 | -0.379 | -0.412 | — |
| chr11_356044_G_C | chr11:356044 | -0.646 | -0.223 | -0.235 | — |
| chr11_356029_G_T | chr11:356029 | 0.637 | 0.359 | 0.459 | — |
| chr11_353651_C_T | chr11:353651 | 0.622 | 0.812 | 0.741 | 0.728% |
| chr11_356136_A_G | chr11:356136 | -0.621 | -0.141 | -0.559 | — |
| chr11_356162_G_A | chr11:356162 | 0.358 | 0.321 | 1.000 | 0.0055% |
| chr11_356207_G_A | chr11:356207 | 0.283 | 0.249 | 1.000 | 0.0045% |
| chr11_364633_C_T | chr11:364633 | -0.616 | -0.280 | -0.918 | 0.0060% |
| chr11_356012_A_G | chr11:356012 | -0.612 | -0.434 | -0.447 | — |
| chr11_356207_G_C | chr11:356207 | 0.243 | 0.208 | 1.000 | 0.016% |
| chr11_356076_G_C | chr11:356076 | -0.606 | -0.100 | -0.229 | — |
| chr11_356103_G_A | chr11:356103 | -0.602 | -0.129 | 0.047 | — |
| chr11_356013_A_C | chr11:356013 | -0.597 | -0.388 | -0.235 | — |
| chr11_356112_G_T | chr11:356112 | -0.591 | -0.086 | -0.288 | — |
| chr11_356160_G_A | chr11:356160 | 0.393 | 0.230 | 1.000 | <0.001% |
| chr11_356028_C_A | chr11:356028 | 0.571 | 0.458 | 0.494 | — |
| chr11_356395_C_T | chr11:356395 | -0.571 | -0.255 | -0.682 | 0.0035% |
| chr11_356112_G_A | chr11:356112 | -0.569 | -0.086 | -0.271 | — |
| chr11_356048_C_T | chr11:356048 | -0.567 | -0.184 | -0.259 | — |
| chr11_356050_G_T | chr11:356050 | -0.567 | -0.307 | -0.141 | — |
| chr11_356397_G_A | chr11:356397 | -0.564 | -0.173 | -0.706 | 0.017% |
| chr11_353683_G_T | chr11:353683 | -0.559 | -0.655 | -0.747 | <0.001% |
| chr11_356026_G_C | chr11:356026 | -0.559 | -0.095 | -0.082 | — |
| chr11_356184_G_A | chr11:356184 | 0.376 | 0.185 | 0.988 | <0.001% |
| chr11_353520_G_T | chr11:353520 | -0.547 | -0.381 | -0.253 | <0.001% |
| chr11_356017_T_A | chr11:356017 | -0.546 | -0.246 | -0.024 | <0.001% |
| chr11_356104_G_T | chr11:356104 | -0.542 | -0.067 | -0.018 | — |
| chr11_356159_G_A | chr11:356159 | 0.418 | 0.199 | 0.953 | <0.001% |
| chr11_356041_A_G | chr11:356041 | -0.527 | -0.204 | -0.294 | — |
| chr11_356042_A_C | chr11:356042 | -0.527 | -0.176 | -0.282 | — |
| chr11_356091_C_A | chr11:356091 | -0.522 | -0.171 | -0.159 | — |
| chr11_356308_C_T | chr11:356308 | 0.514 | 0.339 | 0.059 | 0.0033% |
| chr11_356041_A_T | chr11:356041 | -0.504 | -0.072 | -0.059 | — |
| chr11_356055_T_C | chr11:356055 | -0.496 | -0.213 | -0.153 | <0.001% |
| chr11_353520_G_C | chr11:353520 | -0.494 | -0.266 | -0.159 | <0.001% |
| chr11_356014_C_G | chr11:356014 | -0.493 | -0.339 | -0.371 | — |
| chr11_356181_G_A | chr11:356181 | 0.235 | 0.264 | 0.871 | 0.0043% |
| chr11_356018_C_A | chr11:356018 | 0.481 | 0.254 | 0.476 | 0.0033% |
| chr11_356074_C_G | chr11:356074 | -0.479 | -0.187 | -0.276 | — |
| chr11_356092_C_T | chr11:356092 | -0.479 | -0.207 | -0.247 | — |
| chr11_356096_A_G | chr11:356096 | -0.476 | -0.218 | -0.412 | — |
| chr11_353637_C_G | chr11:353637 | -0.473 | -0.452 | -0.500 | <0.001% |
| chr11_356089_G_T | chr11:356089 | 0.473 | 0.105 | 0.159 | — |
| chr11_356090_G_A | chr11:356090 | -0.473 | -0.121 | -0.065 | 4.44% |
| chr11_353520_G_A | chr11:353520 | -0.469 | -0.327 | 0.129 | <0.001% |
| chr11_356076_G_T | chr11:356076 | -0.463 | -0.164 | -0.335 | — |
| chr11_356013_A_G | chr11:356013 | -0.461 | -0.306 | -0.194 | <0.001% |
| chr11_356158_G_A | chr11:356158 | 0.328 | 0.232 | 0.812 | <0.001% |
| chr11_356084_A_G | chr11:356084 | -0.456 | -0.350 | -0.371 | <0.001% |
| chr11_356072_A_G | chr11:356072 | -0.444 | -0.319 | -0.300 | — |
| chr11_355957_G_T | chr11:355957 | 0.443 | 0.298 | 0.118 | 17.2% |
| chr11_356082_A_T | chr11:356082 | 0.439 | 0.138 | 0.265 | — |
| chr11_356387_C_T | chr11:356387 | -0.438 | -0.126 | -0.376 | 0.0061% |
| chr11_356009_G_T | chr11:356009 | -0.436 | -0.269 | -0.253 | — |
| chr11_356070_A_C | chr11:356070 | 0.436 | 0.140 | 0.282 | — |
| chr11_355948_C_G | chr11:355948 | 0.429 | 0.240 | 0.129 | 0.170% |
| chr11_356001_T_G | chr11:356001 | -0.429 | -0.115 | -0.165 | <0.001% |
| chr11_356211_G_C | chr11:356211 | 0.143 | 0.179 | 0.753 | <0.001% |
| chr11_356094_G_C | chr11:356094 | -0.419 | -0.168 | -0.118 | 0.0027% |
| chr11_356158_G_C | chr11:356158 | 0.261 | 0.212 | 0.741 | 0.491% |
| chr11_356036_A_G | chr11:356036 | -0.416 | -0.164 | -0.224 | — |
| chr11_356123_C_A | chr11:356123 | -0.416 | -0.165 | -0.400 | — |
| chr11_356135_G_T | chr11:356135 | 0.108 | 0.381 | 0.724 | — |
| chr11_356163_G_A | chr11:356163 | 0.146 | 0.240 | 0.718 | 0.0015% |
| chr11_356109_G_A | chr11:356109 | -0.403 | -0.057 | 0.047 | — |
| chr11_356388_C_G | chr11:356388 | -0.399 | -0.126 | -0.353 | 0.0021% |
| chr11_353674_C_A | chr11:353674 | -0.398 | -0.584 | -0.600 | <0.001% |
| chr11_356018_C_G | chr11:356018 | 0.396 | 0.146 | 0.359 | — |
| chr11_356110_G_T | chr11:356110 | -0.396 | -0.084 | 0.018 | — |
| chr11_356159_G_T | chr11:356159 | 0.110 | 0.048 | 0.694 | <0.001% |
| chr11_356020_C_T | chr11:356020 | 0.391 | 0.199 | -0.106 | — |
| chr11_356029_G_C | chr11:356029 | 0.389 | 0.226 | 0.329 | — |
| chr11_356033_G_A | chr11:356033 | 0.389 | 0.115 | 0.271 | — |
| chr11_353568_G_C | chr11:353568 | 0.386 | 0.183 | 0.071 | <0.001% |
| chr11_356053_C_T | chr11:356053 | -0.386 | -0.121 | -0.271 | — |
| chr11_356082_A_C | chr11:356082 | 0.386 | 0.063 | 0.135 | — |
| chr11_356096_A_T | chr11:356096 | -0.156 | 0.451 | 0.682 | — |
| chr11_356091_C_G | chr11:356091 | -0.383 | -0.043 | -0.129 | — |
| chr11_356157_G_T | chr11:356157 | 0.070 | 0.260 | 0.671 | 0.0050% |
| chr11_356093_A_G | chr11:356093 | -0.376 | -0.142 | -0.135 | — |
| chr11_356011_A_T | chr11:356011 | -0.374 | -0.249 | -0.312 | — |
| chr11_356085_G_A | chr11:356085 | 0.373 | 0.137 | 0.229 | — |
| chr11_356094_G_T | chr11:356094 | -0.373 | -0.199 | -0.194 | — |
| chr11_356060_C_T | chr11:356060 | -0.371 | -0.249 | -0.235 | — |
| chr11_356081_G_A | chr11:356081 | -0.369 | -0.081 | -0.035 | — |
| chr11_356135_G_C | chr11:356135 | 0.369 | 0.018 | 0.124 | — |
| chr11_356314_G_C | chr11:356314 | -0.311 | -0.080 | -0.647 | <0.001% |
| chr11_356009_G_C | chr11:356009 | -0.364 | -0.225 | -0.176 | <0.001% |
| chr11_356027_A_C | chr11:356027 | 0.364 | 0.109 | 0.247 | — |
| chr11_353635_T_C | chr11:353635 | 0.363 | 0.330 | 0.412 | 0.683% |
| chr11_356091_C_T | chr11:356091 | -0.363 | -0.090 | -0.124 | — |
| chr11_356060_C_G | chr11:356060 | -0.359 | -0.156 | -0.200 | — |
| chr11_356038_T_G | chr11:356038 | -0.358 | -0.140 | -0.118 | — |
| chr11_356062_G_A | chr11:356062 | 0.353 | 0.438 | 0.447 | — |
| chr11_356122_G_C | chr11:356122 | -0.351 | 0.189 | 0.453 | — |
| chr11_356013_A_T | chr11:356013 | -0.348 | -0.199 | -0.124 | — |
| chr11_356009_G_A | chr11:356009 | -0.346 | -0.216 | -0.282 | — |
| chr11_356042_A_T | chr11:356042 | -0.346 | -0.099 | -0.165 | — |
| chr11_364634_G_A | chr11:364634 | 0.344 | 0.127 | 0.365 | 0.022% |
| chr11_355973_T_C | chr11:355973 | -0.343 | -0.226 | -0.329 | 0.0040% |
| chr11_356083_A_T | chr11:356083 | 0.339 | 0.166 | 0.218 | — |
| chr11_356080_T_A | chr11:356080 | 0.336 | 0.093 | 0.059 | <0.001% |
| chr11_356045_G_A | chr11:356045 | -0.333 | -0.100 | -0.188 | — |
| chr11_356090_G_T | chr11:356090 | -0.333 | -0.151 | -0.247 | — |
| chr11_356042_A_G | chr11:356042 | -0.329 | -0.150 | -0.188 | 88.4% |
| chr11_356068_G_A | chr11:356068 | -0.329 | -0.173 | -0.371 | — |
| chr11_356141_C_T | chr11:356141 | -0.243 | -0.192 | -0.582 | — |
| chr11_356111_G_C | chr11:356111 | -0.328 | 0.074 | 0.059 | — |
| chr11_356020_C_A | chr11:356020 | 0.326 | 0.142 | -0.176 | — |
| chr11_356039_G_C | chr11:356039 | 0.324 | 0.324 | 0.447 | — |
| chr11_356025_C_T | chr11:356025 | 0.323 | 0.103 | 0.282 | — |
| chr11_356093_A_C | chr11:356093 | -0.319 | -0.091 | -0.088 | — |
| chr11_356014_C_T | chr11:356014 | -0.316 | -0.156 | -0.106 | 0.0026% |
| chr11_356071_A_C | chr11:356071 | 0.311 | 0.154 | 0.171 | — |
| chr11_356015_A_T | chr11:356015 | -0.306 | -0.126 | -0.182 | — |
| chr11_356021_G_C | chr11:356021 | 0.306 | 0.067 | 0.012 | — |
| chr11_356066_G_T | chr11:356066 | 0.306 | 0.270 | 0.200 | — |
| chr11_353588_G_C | chr11:353588 | 0.304 | 0.330 | 0.259 | 0.012% |
| chr11_364695_C_T | chr11:364695 | 0.304 | 0.112 | 0.365 | 0.0033% |
| chr11_353634_T_C | chr11:353634 | -0.301 | -0.360 | -0.429 | <0.001% |
| chr11_356156_G_A | chr11:356156 | 0.111 | 0.180 | 0.529 | 0.0015% |
| chr11_356383_C_T | chr11:356383 | -0.300 | -0.129 | -0.182 | 0.010% |
| chr11_356123_C_G | chr11:356123 | -0.195 | 0.310 | 0.524 | — |
| chr11_356134_G_T | chr11:356134 | 0.295 | -0.013 | -0.082 | — |
| chr11_356015_A_G | chr11:356015 | -0.293 | -0.221 | -0.041 | <0.001% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.