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PTK2B

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near PTK2B

chr8:27,211,477..27,559,391, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr8_27274470_T_G	chr8:27274470	-0.443	-0.079	-0.803	0.0013%
chr8_27274484_A_G	chr8:27274484	0.373	-0.028	0.621	0.0020%
chr8_27274471_G_A	chr8:27274471	-0.263	0.015	-0.647	0.0013%
chr8_27274794_T_G	chr8:27274794	0.233	0.249	0.612	<0.001%
chr8_27274525_T_G	chr8:27274525	-0.038	0.155	0.594	0.0033%
chr8_27274560_T_A	chr8:27274560	0.230	0.152	-0.594	<0.001%
chr8_27274483_C_T	chr8:27274483	-0.246	0.056	-0.588	0.0013%
chr8_27280334_C_T	chr8:27280334	0.068	0.293	0.588	9.38%
chr8_27242229_C_A	chr8:27242229	0.304	0.180	0.312	<0.001%
chr8_27274678_T_C	chr8:27274678	0.002	-0.198	-0.529	0.0079%
chr8_27249875_A_G	chr8:27249875	0.121	0.006	0.521	<0.001%
chr8_27280340_C_T	chr8:27280340	0.069	0.230	0.488	<0.001%
chr8_27274574_G_C	chr8:27274574	0.261	0.150	0.059	<0.001%
chr8_27274570_G_A	chr8:27274570	-0.260	0.051	-0.241	<0.001%
chr8_27242229_C_T	chr8:27242229	0.253	0.165	0.282	<0.001%
chr8_27274850_C_G	chr8:27274850	-0.047	0.036	-0.441	0.0026%
chr8_27274589_C_A	chr8:27274589	0.246	0.117	0.224	<0.001%
chr8_27274776_T_A	chr8:27274776	0.002	-0.086	-0.429	<0.001%
chr8_27280342_C_G	chr8:27280342	0.068	0.184	0.424	0.0020%
chr8_27280341_C_A	chr8:27280341	0.046	0.169	0.394	0.0020%
chr8_27274419_A_G	chr8:27274419	-0.115	0.112	-0.391	0.0046%
chr8_27274469_T_C	chr8:27274469	-0.216	0.003	-0.391	0.0026%
chr8_27274419_A_C	chr8:27274419	-0.113	0.109	-0.359	1.36%
chr8_27250208_G_T	chr8:27250208	-0.133	-0.044	-0.338	<0.001%
chr8_27274542_C_G	chr8:27274542	-0.186	-0.234	-0.241	0.0026%
chr8_27274590_G_T	chr8:27274590	-0.183	0.033	-0.171	0.0013%
chr8_27274548_C_T	chr8:27274548	0.115	0.086	0.318	<0.001%
chr8_27274795_T_C	chr8:27274795	0.032	0.117	0.318	0.0013%
chr8_27280232_C_G	chr8:27280232	0.175	0.179	0.309	0.0020%
chr8_27280335_C_A	chr8:27280335	0.051	0.161	0.309	0.0066%
chr8_27274335_A_G	chr8:27274335	0.102	0.084	0.306	0.0033%
chr8_27241643_G_C	chr8:27241643	0.026	0.036	-0.294	0.0026%
chr8_27274710_G_C	chr8:27274710	-0.028	0.000	-0.288	0.0079%
chr8_27274892_A_T	chr8:27274892	-0.011	-0.048	-0.285	0.0013%
chr8_27274543_G_A	chr8:27274543	-0.105	-0.058	-0.276	0.076%
chr8_27274618_G_T	chr8:27274618	0.156	0.102	0.124	0.0013%
chr8_27249803_G_C	chr8:27249803	0.116	0.061	0.274	<0.001%
chr8_27280319_C_A	chr8:27280319	0.047	0.145	0.274	0.0013%
chr8_27274364_T_A	chr8:27274364	0.051	0.063	0.272	0.0013%
chr8_27274589_C_G	chr8:27274589	0.095	0.112	0.271	0.0013%
chr8_27242245_C_G	chr8:27242245	0.150	0.087	0.147	<0.001%
chr8_27274454_G_A	chr8:27274454	-0.150	0.005	-0.197	0.0013%
chr8_27258427_A_T	chr8:27258427	-0.149	0.047	-0.076	0.0033%
chr8_27250204_A_G	chr8:27250204	0.112	-0.008	0.262	0.014%
chr8_27274533_C_T	chr8:27274533	-0.148	-0.069	-0.082	<0.001%
chr8_27241674_T_C	chr8:27241674	-0.041	-0.036	-0.259	<0.001%
chr8_27274547_G_A	chr8:27274547	-0.002	0.069	-0.259	<0.001%
chr8_27274697_C_G	chr8:27274697	0.037	0.020	0.259	0.0013%
chr8_27242207_T_A	chr8:27242207	-0.143	-0.089	-0.141	0.0059%
chr8_27245507_A_G	chr8:27245507	-0.042	-0.060	-0.250	31.3%
chr8_27274377_G_A	chr8:27274377	0.141	0.018	0.128	<0.001%
chr8_27258500_T_C	chr8:27258500	0.140	0.046	0.179	0.0013%
chr8_27274500_G_A	chr8:27274500	-0.140	0.058	-0.106	<0.001%
chr8_27242213_T_A	chr8:27242213	-0.138	-0.098	-0.171	<0.001%
chr8_27274490_C_A	chr8:27274490	-0.138	-0.030	-0.144	<0.001%
chr8_27242214_A_C	chr8:27242214	-0.136	-0.110	-0.147	<0.001%
chr8_27274479_G_C	chr8:27274479	-0.123	0.023	-0.235	<0.001%
chr8_27281153_C_T	chr8:27281153	-0.018	-0.089	-0.235	0.0020%
chr8_27274329_A_G	chr8:27274329	0.109	0.058	0.232	<0.001%
chr8_27295402_T_C	chr8:27295402	0.108	0.180	0.226	—
chr8_27281179_T_C	chr8:27281179	0.068	0.084	0.224	<0.001%
chr8_27245718_G_A	chr8:27245718	0.125	0.077	0.209	0.0066%
chr8_27241670_C_T	chr8:27241670	0.022	0.008	0.218	<0.001%
chr8_27274474_T_C	chr8:27274474	0.025	0.005	0.218	<0.001%
chr8_27274594_T_G	chr8:27274594	-0.033	0.008	0.218	<0.001%
chr8_27280514_T_G	chr8:27280514	0.123	0.202	0.141	0.0013%
chr8_27295400_C_G	chr8:27295400	0.123	0.145	0.197	—
chr8_27249914_C_A	chr8:27249914	-0.121	-0.005	0.085	<0.001%
chr8_27274565_C_T	chr8:27274565	-0.121	0.119	-0.053	<0.001%
chr8_27242208_C_G	chr8:27242208	-0.118	-0.077	-0.056	0.0013%
chr8_27274397_C_G	chr8:27274397	0.118	0.135	0.044	<0.001%
chr8_27280873_C_T	chr8:27280873	0.113	0.193	0.206	<0.001%
chr8_27281173_A_C	chr8:27281173	0.070	0.063	0.206	0.0020%
chr8_27241747_C_G	chr8:27241747	0.116	0.016	0.179	<0.001%
chr8_27274378_A_C	chr8:27274378	0.100	0.086	0.200	<0.001%
chr8_27241643_G_A	chr8:27241643	-0.010	0.024	-0.197	0.0020%
chr8_27241663_T_C	chr8:27241663	0.017	-0.008	-0.197	0.0079%
chr8_27274664_G_C	chr8:27274664	0.111	0.063	0.082	<0.001%
chr8_27258405_A_G	chr8:27258405	0.085	-0.005	0.194	<0.001%
chr8_27274768_C_T	chr8:27274768	0.057	0.046	-0.194	<0.001%
chr8_27274796_C_A	chr8:27274796	0.110	0.096	-0.124	<0.001%
chr8_27241718_T_C	chr8:27241718	0.108	-0.004	0.024	<0.001%
chr8_27280319_C_G	chr8:27280319	0.036	0.079	0.191	4.77%
chr8_27258493_T_G	chr8:27258493	-0.105	-0.029	0.000	<0.001%
chr8_27274765_C_A	chr8:27274765	0.003	0.018	-0.182	<0.001%
chr8_27245695_C_T	chr8:27245695	-0.050	-0.011	-0.179	0.011%
chr8_27274442_A_G	chr8:27274442	0.100	0.046	0.044	<0.001%
chr8_27274807_A_G	chr8:27274807	0.043	0.028	0.176	0.0033%
chr8_27242245_C_T	chr8:27242245	0.098	0.072	0.062	<0.001%
chr8_27274411_G_A	chr8:27274411	0.077	0.028	0.174	<0.001%
chr8_27274590_G_A	chr8:27274590	-0.098	0.079	-0.106	0.0039%
chr8_27274618_G_A	chr8:27274618	0.002	0.005	-0.171	0.0092%
chr8_27274629_C_T	chr8:27274629	-0.052	-0.003	-0.171	<0.001%
chr8_27274725_C_T	chr8:27274725	0.005	0.043	0.171	1.38%
chr8_27274809_A_G	chr8:27274809	0.012	0.084	0.171	<0.001%
chr8_27250061_T_C	chr8:27250061	0.096	0.069	0.132	<0.001%
chr8_27241644_G_C	chr8:27241644	-0.016	-0.001	-0.168	0.0053%
chr8_27258440_G_C	chr8:27258440	-0.095	-0.003	-0.082	<0.001%
chr8_27274381_A_G	chr8:27274381	-0.057	-0.010	-0.165	0.0013%
chr8_27274581_G_T	chr8:27274581	-0.093	-0.038	-0.129	0.0033%
chr8_27274395_T_C	chr8:27274395	0.065	0.018	0.159	<0.001%
chr8_27281071_T_C	chr8:27281071	0.002	0.005	0.159	<0.001%
chr8_27274977_C_G	chr8:27274977	0.042	0.039	0.157	<0.001%
chr8_27274611_G_T	chr8:27274611	-0.070	-0.013	-0.153	<0.001%
chr8_27274652_T_C	chr8:27274652	0.007	0.005	0.153	<0.001%
chr8_27274715_A_G	chr8:27274715	-0.033	-0.041	0.153	0.0026%
chr8_27280915_C_G	chr8:27280915	-0.087	-0.048	0.082	0.0020%
chr8_27258431_C_T	chr8:27258431	-0.085	0.060	-0.009	<0.001%
chr8_27258493_T_A	chr8:27258493	-0.084	-0.001	-0.065	0.0013%
chr8_27242195_A_G	chr8:27242195	0.030	0.032	0.147	0.0046%
chr8_27258432_C_G	chr8:27258432	-0.025	0.051	0.147	0.0013%
chr8_27274437_G_A	chr8:27274437	-0.042	-0.025	-0.147	0.0013%
chr8_27274594_T_C	chr8:27274594	0.017	0.036	0.147	<0.001%
chr8_27274646_C_G	chr8:27274646	0.075	0.056	0.147	0.0013%
chr8_27274667_C_A	chr8:27274667	0.083	0.063	-0.006	0.0020%
chr8_27281174_G_A	chr8:27281174	-0.007	0.048	0.147	<0.001%
chr8_27241664_G_C	chr8:27241664	0.021	-0.003	-0.144	0.0013%
chr8_27274735_C_T	chr8:27274735	0.082	0.104	0.012	<0.001%
chr8_27258440_G_A	chr8:27258440	-0.081	0.015	-0.091	<0.001%
chr8_27280346_C_G	chr8:27280346	0.027	0.053	0.141	<0.001%
chr8_27274868_G_A	chr8:27274868	-0.079	-0.076	-0.126	0.0020%
chr8_27280477_A_G	chr8:27280477	-0.079	-0.132	-0.112	0.0013%
chr8_27245728_T_C	chr8:27245728	0.045	0.020	0.138	0.0039%
chr8_27274844_G_C	chr8:27274844	0.077	0.028	0.062	0.047%
chr8_27250201_T_A	chr8:27250201	-0.042	-0.005	-0.135	<0.001%
chr8_27274618_G_C	chr8:27274618	0.077	-0.028	-0.053	0.494%
chr8_27274646_C_T	chr8:27274646	-0.047	-0.015	-0.135	0.0059%
chr8_27274889_G_C	chr8:27274889	-0.038	-0.046	-0.135	<0.001%
chr8_27280813_C_T	chr8:27280813	0.015	0.063	0.135	1.23%
chr8_27280858_T_G	chr8:27280858	0.053	0.155	0.135	<0.001%
chr8_27274312_T_G	chr8:27274312	0.073	0.005	0.133	<0.001%
chr8_27258474_T_C	chr8:27258474	-0.068	0.069	-0.132	<0.001%
chr8_27280716_T_C	chr8:27280716	0.012	0.023	0.132	<0.001%
chr8_27258396_A_G	chr8:27258396	0.074	0.006	0.109	0.0033%
chr8_27280541_T_C	chr8:27280541	0.074	0.080	0.103	<0.001%
chr8_27274520_G_C	chr8:27274520	0.073	0.033	0.024	0.0013%
chr8_27274640_G_C	chr8:27274640	-0.073	-0.005	-0.024	<0.001%
chr8_27280918_T_C	chr8:27280918	-0.062	-0.020	0.129	0.0066%
chr8_27274256_C_T	chr8:27274256	-0.048	-0.030	-0.128	<0.001%
chr8_27241674_T_G	chr8:27241674	0.000	-0.013	0.126	<0.001%
chr8_27241780_G_A	chr8:27241780	-0.003	0.009	-0.126	0.0026%
chr8_27274277_A_G	chr8:27274277	0.045	0.020	0.126	<0.001%
chr8_27242246_C_T	chr8:27242246	0.070	0.048	0.056	<0.001%
chr8_27274345_T_G	chr8:27274345	0.000	0.015	0.124	0.0013%
chr8_27274573_G_A	chr8:27274573	0.038	0.081	-0.124	<0.001%
chr8_27274604_C_T	chr8:27274604	-0.033	0.038	-0.124	0.013%
chr8_27274698_C_T	chr8:27274698	0.008	0.030	0.124	<0.001%
chr8_27280494_C_A	chr8:27280494	-0.070	-0.100	-0.106	<0.001%
chr8_27241781_G_A	chr8:27241781	0.019	0.011	-0.121	0.0013%
chr8_27249857_C_G	chr8:27249857	-0.027	-0.003	-0.121	0.236%
chr8_27274280_T_C	chr8:27274280	0.039	0.033	0.120	4.48%
chr8_27274825_C_G	chr8:27274825	-0.067	-0.020	0.032	<0.001%
chr8_27274886_C_G	chr8:27274886	0.032	0.025	0.118	0.0020%
chr8_27280489_T_C	chr8:27280489	-0.048	-0.089	-0.118	<0.001%
chr8_27280878_C_T	chr8:27280878	-0.067	-0.051	-0.018	0.0066%
chr8_27274569_C_G	chr8:27274569	0.065	-0.013	-0.082	<0.001%
chr8_27250240_T_C	chr8:27250240	0.042	0.020	0.112	<0.001%
chr8_27274662_G_A	chr8:27274662	-0.025	0.020	-0.112	<0.001%
chr8_27241649_C_A	chr8:27241649	-0.029	-0.015	-0.109	<0.001%
chr8_27258501_T_C	chr8:27258501	0.062	0.009	0.097	<0.001%
chr8_27258547_C_A	chr8:27258547	-0.036	-0.004	-0.109	0.012%
chr8_27274579_T_C	chr8:27274579	0.062	0.015	0.059	<0.001%
chr8_27274921_C_T	chr8:27274921	-0.002	-0.019	-0.109	<0.001%
chr8_27241675_A_G	chr8:27241675	-0.015	-0.010	0.106	0.0013%
chr8_27241677_C_T	chr8:27241677	-0.020	0.013	-0.106	<0.001%
chr8_27249915_C_T	chr8:27249915	-0.060	0.014	-0.050	0.014%
chr8_27274603_C_T	chr8:27274603	-0.055	0.020	-0.106	<0.001%
chr8_27274779_G_C	chr8:27274779	-0.013	0.023	0.106	<0.001%
chr8_27274811_T_A	chr8:27274811	0.060	0.043	-0.065	<0.001%
chr8_27274915_C_G	chr8:27274915	0.017	0.032	-0.106	<0.001%
chr8_27280876_T_C	chr8:27280876	0.058	0.058	0.106	0.011%
chr8_27281100_C_A	chr8:27281100	-0.035	-0.033	-0.106	0.0046%
chr8_27281154_G_A	chr8:27281154	-0.008	-0.041	-0.106	0.0020%
chr8_27295402_T_A	chr8:27295402	0.059	0.066	0.091	—
chr8_27241807_T_C	chr8:27241807	-0.018	0.055	0.103	0.0099%
chr8_27274599_G_A	chr8:27274599	-0.058	-0.071	0.000	<0.001%
chr8_27280485_G_A	chr8:27280485	-0.035	-0.066	-0.103	<0.001%
chr8_27274285_A_G	chr8:27274285	0.057	0.048	0.083	0.0013%
chr8_27274369_A_G	chr8:27274369	-0.057	0.020	0.024	0.0059%
chr8_27245591_C_T	chr8:27245591	0.027	0.046	0.100	0.011%
chr8_27274612_C_A	chr8:27274612	-0.057	-0.028	0.029	<0.001%
chr8_27280618_T_G	chr8:27280618	0.035	0.030	0.100	<0.001%
chr8_27280850_G_A	chr8:27280850	0.047	0.071	0.100	<0.001%
chr8_27280858_T_C	chr8:27280858	-0.010	0.066	0.100	0.0053%
chr8_27280973_C_T	chr8:27280973	0.018	0.048	0.100	0.546%
chr8_27242187_T_C	chr8:27242187	0.053	0.033	0.097	<0.001%
chr8_27242196_C_T	chr8:27242196	0.055	0.059	0.068	0.0046%
chr8_27242221_A_T	chr8:27242221	-0.055	-0.060	-0.082	<0.001%
chr8_27245486_G_A	chr8:27245486	-0.010	-0.006	-0.097	<0.001%
chr8_27245726_A_C	chr8:27245726	0.037	0.016	0.097	<0.001%
chr8_27258427_A_G	chr8:27258427	-0.020	0.042	0.097	<0.001%
chr8_27258466_C_T	chr8:27258466	-0.055	0.014	-0.068	0.0013%
chr8_27258502_G_T	chr8:27258502	0.045	0.024	0.097	<0.001%
chr8_27274732_G_A	chr8:27274732	-0.055	-0.053	0.065	0.0013%
chr8_27249841_C_T	chr8:27249841	0.053	0.001	0.088	0.0033%
chr8_27274993_T_C	chr8:27274993	0.002	-0.009	0.094	0.0013%
chr8_27280166_C_G	chr8:27280166	-0.042	-0.051	-0.094	<0.001%
chr8_27281135_T_C	chr8:27281135	0.001	0.008	0.094	0.0013%
chr8_27274364_T_C	chr8:27274364	0.003	0.020	0.093	0.0046%
chr8_27295426_G_C	chr8:27295426	0.052	0.046	0.071	—

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.