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SCAANT1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SCAANT1
chr3:63,811,517..64,011,772, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr3_63911864_T_A | chr3:63911864 | 21,120 | 3,936 | 5,632 | — |
| chr3_63911898_C_G | chr3:63911898 | -19,840 | -5,600 | -12,544 | — |
| chr3_63911898_C_A | chr3:63911898 | -18,304 | -5,824 | -13,056 | — |
| chr3_63911898_C_T | chr3:63911898 | -15,488 | -4,608 | -10,496 | — |
| chr3_63911895_G_A | chr3:63911895 | -14,976 | -5,024 | -9,472 | — |
| chr3_63911897_G_T | chr3:63911897 | 14,848 | 4,576 | 1,024 | — |
| chr3_63911895_G_C | chr3:63911895 | -14,720 | -5,440 | -12,288 | — |
| chr3_63911899_A_T | chr3:63911899 | -13,824 | -3,968 | -7,424 | — |
| chr3_63911899_A_C | chr3:63911899 | -13,696 | -3,936 | -6,400 | — |
| chr3_63911888_A_C | chr3:63911888 | 13,568 | 3,520 | 5,632 | — |
| chr3_63911868_A_T | chr3:63911868 | 13,056 | 2,720 | 1,792 | — |
| chr3_63911895_G_T | chr3:63911895 | -12,416 | -3,712 | -6,144 | — |
| chr3_63911892_C_A | chr3:63911892 | 12,288 | 4,320 | 4,864 | — |
| chr3_63911894_A_T | chr3:63911894 | -11,264 | -2,624 | -3,840 | — |
| chr3_63911897_G_A | chr3:63911897 | -11,008 | -4,480 | -9,984 | 4.6e-5 |
| chr3_63911868_A_C | chr3:63911868 | 10,624 | 3,616 | 3,840 | 6.6e-6 |
| chr3_63911882_G_C | chr3:63911882 | -10,624 | -2,336 | -5,376 | — |
| chr3_63911901_A_G | chr3:63911901 | -10,368 | -3,520 | -4,096 | — |
| chr3_63911899_A_G | chr3:63911899 | -10,112 | -3,392 | -4,608 | 6.6e-6 |
| chr3_63911900_A_T | chr3:63911900 | -10,112 | -2,848 | -6,144 | — |
| chr3_63911902_G_A | chr3:63911902 | -9,984 | -2,688 | -4,352 | — |
| chr3_63911901_A_T | chr3:63911901 | -9,856 | -3,264 | -4,096 | — |
| chr3_63911897_G_C | chr3:63911897 | -9,728 | -4,192 | -5,632 | — |
| chr3_63911864_T_G | chr3:63911864 | 9,088 | 1,792 | 5,888 | — |
| chr3_63911900_A_G | chr3:63911900 | -8,960 | -3,424 | -7,936 | — |
| chr3_63911896_G_C | chr3:63911896 | -8,704 | -4,032 | -10,496 | — |
| chr3_63911894_A_C | chr3:63911894 | -8,448 | -3,424 | -6,400 | — |
| chr3_63911901_A_C | chr3:63911901 | -8,320 | -3,552 | -1,792 | — |
| chr3_63911900_A_C | chr3:63911900 | -7,936 | -2,688 | -5,120 | — |
| chr3_63911884_C_G | chr3:63911884 | 7,808 | 2,176 | 5,120 | — |
| chr3_63911861_G_A | chr3:63911861 | -7,680 | -1,696 | -5,632 | 9.9e-5 |
| chr3_63911883_C_A | chr3:63911883 | 7,552 | 2,272 | 3,328 | — |
| chr3_63911869_C_T | chr3:63911869 | 7,424 | 2,304 | -256 | — |
| chr3_63911889_A_G | chr3:63911889 | 6,912 | 1,632 | 3,328 | — |
| chr3_63911867_G_C | chr3:63911867 | 6,784 | 1,760 | 1,792 | — |
| chr3_63911886_G_A | chr3:63911886 | 6,784 | 2,912 | 2,816 | — |
| chr3_63875979_A_C | chr3:63875979 | 6,688 | 3,104 | 5,376 | — |
| chr3_63911846_C_G | chr3:63911846 | -6,400 | -1,536 | -4,864 | — |
| chr3_63911873_T_A | chr3:63911873 | 6,400 | 1,792 | 3,840 | — |
| chr3_63911894_A_G | chr3:63911894 | -6,144 | -1,504 | -3,584 | — |
| chr3_63911893_G_T | chr3:63911893 | -5,888 | -1,792 | -3,072 | — |
| chr3_63911886_G_C | chr3:63911886 | -5,760 | -448 | -2,560 | — |
| chr3_63911855_A_G | chr3:63911855 | 5,632 | 1,216 | 1,536 | — |
| chr3_63911887_C_A | chr3:63911887 | -5,504 | -1,376 | -4,352 | 6.6e-6 |
| chr3_63911896_G_T | chr3:63911896 | -5,376 | -3,232 | -9,472 | — |
| chr3_63911883_C_G | chr3:63911883 | 5,376 | 1,408 | 2,048 | — |
| chr3_63911885_C_A | chr3:63911885 | 5,248 | 1,440 | 1,280 | 6.6e-6 |
| chr3_63911865_T_G | chr3:63911865 | 5,120 | 1,184 | 2,304 | — |
| chr3_63911859_A_T | chr3:63911859 | -4,992 | -1,472 | -3,584 | — |
| chr3_63911882_G_A | chr3:63911882 | -4,992 | -800 | -768 | — |
| chr3_63911885_C_T | chr3:63911885 | 4,992 | 1,120 | -768 | — |
| chr3_63911888_A_T | chr3:63911888 | 4,992 | 1,344 | 2,304 | — |
| chr3_63911869_C_A | chr3:63911869 | -4,736 | -256 | -5,888 | — |
| chr3_63911862_C_T | chr3:63911862 | -4,608 | -960 | -5,376 | 6.6e-6 |
| chr3_63911866_T_C | chr3:63911866 | 4,608 | 1,056 | 3,584 | — |
| chr3_63911896_G_A | chr3:63911896 | -4,480 | -2,560 | -7,680 | — |
| chr3_63911862_C_A | chr3:63911862 | -4,352 | -1,216 | -5,632 | — |
| chr3_63911868_A_G | chr3:63911868 | 4,096 | 1,472 | 2,048 | — |
| chr3_63911865_T_A | chr3:63911865 | 3,968 | 1,312 | 1,536 | — |
| chr3_63911879_G_A | chr3:63911879 | -3,968 | -512 | -2,560 | — |
| chr3_63911864_T_C | chr3:63911864 | 3,840 | 512 | 2,560 | — |
| chr3_63911867_G_T | chr3:63911867 | 3,840 | 736 | -2,560 | — |
| chr3_63911880_C_G | chr3:63911880 | -3,840 | -256 | -3,328 | — |
| chr3_63911887_C_G | chr3:63911887 | 3,840 | 2,368 | -768 | — |
| chr3_63911891_C_A | chr3:63911891 | -3,840 | -1,024 | -2,816 | — |
| chr3_63911884_C_A | chr3:63911884 | 3,712 | 1,248 | 3,840 | — |
| chr3_63911885_C_G | chr3:63911885 | 3,712 | 768 | 768 | — |
| chr3_63911888_A_G | chr3:63911888 | 3,712 | 704 | 2,816 | — |
| chr3_63911855_A_T | chr3:63911855 | 3,584 | 1,920 | 0 | — |
| chr3_63911871_A_C | chr3:63911871 | -3,584 | -896 | 768 | — |
| chr3_63911856_T_G | chr3:63911856 | 3,456 | 832 | 2,816 | — |
| chr3_63911863_T_G | chr3:63911863 | 3,456 | 480 | 1,792 | — |
| chr3_63911876_G_T | chr3:63911876 | -3,456 | -800 | -256 | — |
| chr3_63911890_G_A | chr3:63911890 | -3,456 | -864 | -3,072 | — |
| chr3_63875946_A_T | chr3:63875946 | 3,264 | 1,088 | 2,688 | — |
| chr3_63911889_A_C | chr3:63911889 | 3,200 | 384 | 3,840 | — |
| chr3_63911854_C_G | chr3:63911854 | 3,200 | 768 | 768 | — |
| chr3_63911863_T_A | chr3:63911863 | 3,200 | -192 | -2,048 | — |
| chr3_63911886_G_T | chr3:63911886 | 3,200 | 2,240 | 512 | — |
| chr3_63911849_C_G | chr3:63911849 | -3,072 | -672 | -2,304 | 6.6e-6 |
| chr3_63911850_T_G | chr3:63911850 | 3,072 | 544 | 3,072 | — |
| chr3_63911851_T_C | chr3:63911851 | -2,944 | -608 | -1,792 | — |
| chr3_63911870_A_T | chr3:63911870 | 2,816 | 576 | 256 | — |
| chr3_63911857_T_A | chr3:63911857 | -2,688 | -736 | -768 | — |
| chr3_63911877_C_G | chr3:63911877 | -2,688 | -32 | -1,024 | — |
| chr3_63911880_C_A | chr3:63911880 | -2,688 | -288 | -2,048 | — |
| chr3_63911859_A_C | chr3:63911859 | -2,560 | -768 | -1,536 | — |
| chr3_63911878_G_T | chr3:63911878 | 2,560 | 1,056 | 1,536 | — |
| chr3_63911858_C_T | chr3:63911858 | -2,432 | -416 | -3,072 | — |
| chr3_63911857_T_C | chr3:63911857 | -2,432 | -1,408 | -768 | — |
| chr3_63911869_C_G | chr3:63911869 | -2,304 | -288 | -3,840 | — |
| chr3_63875959_T_C | chr3:63875959 | 2,304 | 800 | 1,728 | — |
| chr3_63911872_C_T | chr3:63911872 | -2,304 | -576 | -2,304 | 6.6e-6 |
| chr3_63911874_C_T | chr3:63911874 | -2,304 | -448 | -512 | — |
| chr3_63911881_C_T | chr3:63911881 | 2,304 | 1,056 | 1,792 | 6.6e-6 |
| chr3_63911873_T_C | chr3:63911873 | -2,176 | -608 | -256 | 6.6e-6 |
| chr3_63911875_T_A | chr3:63911875 | 2,176 | 608 | 1,024 | — |
| chr3_63911875_T_C | chr3:63911875 | -2,176 | -864 | -256 | — |
| chr3_63876007_T_A | chr3:63876007 | 2,112 | 160 | 640 | — |
| chr3_63858164_T_A | chr3:63858164 | 2,080 | 0 | 256 | — |
| chr3_63911889_A_T | chr3:63911889 | 2,048 | 288 | 3,584 | — |
| chr3_63858244_T_A | chr3:63858244 | 2,048 | -192 | 1,600 | — |
| chr3_63911851_T_A | chr3:63911851 | -2,048 | -448 | -1,280 | — |
| chr3_63911856_T_C | chr3:63911856 | -2,048 | -160 | 512 | — |
| chr3_63858235_A_C | chr3:63858235 | 1,984 | -352 | -192 | — |
| chr3_63911858_C_G | chr3:63911858 | 1,920 | 352 | -2,304 | — |
| chr3_63911870_A_G | chr3:63911870 | 1,920 | -64 | 1,280 | — |
| chr3_63911890_G_C | chr3:63911890 | 1,920 | 1,632 | -512 | — |
| chr3_63858161_C_A | chr3:63858161 | 1,888 | 160 | -128 | — |
| chr3_63911861_G_T | chr3:63911861 | -1,792 | -864 | -4,864 | — |
| chr3_63911879_G_C | chr3:63911879 | -1,792 | 256 | 256 | — |
| chr3_63911884_C_T | chr3:63911884 | 1,792 | 544 | 256 | — |
| chr3_63911893_G_A | chr3:63911893 | -1,792 | -352 | -512 | 1.3e-5 |
| chr3_63858161_C_G | chr3:63858161 | 1,760 | 160 | 704 | — |
| chr3_63911862_C_G | chr3:63911862 | -1,664 | -896 | -3,328 | — |
| chr3_63911852_C_A | chr3:63911852 | 1,664 | -576 | -2,304 | 2.6e-5 |
| chr3_63911881_C_G | chr3:63911881 | -1,664 | -160 | -256 | — |
| chr3_63911892_C_T | chr3:63911892 | 1,664 | 1,248 | 1,024 | 1.3e-5 |
| chr3_63876014_T_C | chr3:63876014 | 1,632 | 224 | 768 | — |
| chr3_63876034_T_G | chr3:63876034 | 1,600 | 320 | 1,664 | — |
| chr3_63858147_C_A | chr3:63858147 | -1,568 | -32 | -896 | — |
| chr3_63911873_T_G | chr3:63911873 | 1,536 | -192 | 2,560 | — |
| chr3_63875963_G_T | chr3:63875963 | 1,536 | 576 | 896 | 6.6e-6 |
| chr3_63876021_A_T | chr3:63876021 | 1,536 | 160 | 768 | — |
| chr3_63875946_A_C | chr3:63875946 | 1,440 | 544 | 1,472 | — |
| chr3_63858124_T_G | chr3:63858124 | -1,440 | -32 | 0 | — |
| chr3_63858208_C_G | chr3:63858208 | 1,408 | -320 | 2,496 | — |
| chr3_63911853_C_T | chr3:63911853 | -1,408 | -32 | -2,304 | — |
| chr3_63858232_T_G | chr3:63858232 | 1,408 | -480 | 384 | — |
| chr3_63875946_A_G | chr3:63875946 | 1,408 | 448 | 1,152 | — |
| chr3_63911850_T_A | chr3:63911850 | -1,408 | -544 | -1,024 | — |
| chr3_63911857_T_G | chr3:63911857 | -1,408 | -1,088 | -768 | — |
| chr3_63911866_T_G | chr3:63911866 | 1,408 | -32 | 256 | — |
| chr3_63875924_T_G | chr3:63875924 | 1,376 | 288 | 704 | — |
| chr3_63858197_A_T | chr3:63858197 | 1,344 | 192 | 192 | — |
| chr3_63858203_A_T | chr3:63858203 | 1,344 | 64 | 256 | — |
| chr3_63875924_T_A | chr3:63875924 | 1,344 | 352 | 256 | — |
| chr3_63858121_T_G | chr3:63858121 | -1,280 | 64 | 1,024 | — |
| chr3_63911865_T_C | chr3:63911865 | 1,280 | -64 | 768 | — |
| chr3_63858135_T_G | chr3:63858135 | -1,248 | 96 | 320 | — |
| chr3_63875928_G_T | chr3:63875928 | -1,248 | -64 | -1,024 | — |
| chr3_63858134_G_A | chr3:63858134 | 1,216 | 288 | 576 | — |
| chr3_63858159_T_A | chr3:63858159 | 1,216 | 224 | 64 | — |
| chr3_63858165_T_A | chr3:63858165 | 1,216 | 160 | 0 | — |
| chr3_63876025_A_G | chr3:63876025 | -1,216 | -128 | -384 | — |
| chr3_63876029_A_C | chr3:63876029 | -1,216 | -384 | -128 | — |
| chr3_63858236_T_G | chr3:63858236 | -1,184 | -416 | 768 | — |
| chr3_63876030_T_C | chr3:63876030 | -1,184 | -448 | -576 | — |
| chr3_63911846_C_A | chr3:63911846 | -1,152 | -640 | -2,048 | — |
| chr3_63911863_T_C | chr3:63911863 | 1,152 | 640 | 2,048 | — |
| chr3_63858184_G_T | chr3:63858184 | 1,152 | -640 | 1,280 | — |
| chr3_63875947_G_T | chr3:63875947 | 1,152 | 384 | 320 | — |
| chr3_63858221_A_C | chr3:63858221 | 1,088 | 64 | 1,344 | — |
| chr3_63911845_G_C | chr3:63911845 | -1,024 | -480 | -2,304 | — |
| chr3_63911872_C_A | chr3:63911872 | 1,024 | 320 | -1,792 | — |
| chr3_63875943_C_G | chr3:63875943 | 1,024 | 416 | 1,344 | — |
| chr3_63911861_G_C | chr3:63911861 | -1,024 | -96 | -1,280 | — |
| chr3_63875981_T_G | chr3:63875981 | 1,024 | 704 | 1,216 | — |
| chr3_63876008_T_G | chr3:63876008 | 960 | 224 | 1,152 | — |
| chr3_63858191_A_G | chr3:63858191 | 928 | -64 | 1,664 | — |
| chr3_63911878_G_A | chr3:63911878 | 896 | 32 | -2,816 | — |
| chr3_63911852_C_G | chr3:63911852 | 896 | 512 | 2,560 | — |
| chr3_63911854_C_A | chr3:63911854 | 896 | -288 | -2,560 | — |
| chr3_63858157_G_T | chr3:63858157 | -896 | -64 | -1,216 | 6.6e-6 |
| chr3_63858245_T_G | chr3:63858245 | 832 | 0 | 1,216 | — |
| chr3_63911849_C_T | chr3:63911849 | -768 | -320 | -2,560 | — |
| chr3_63911852_C_T | chr3:63911852 | -768 | -192 | -1,792 | — |
| chr3_63911853_C_G | chr3:63911853 | 768 | 256 | 1,280 | — |
| chr3_63875942_C_G | chr3:63875942 | 736 | 32 | 1,408 | — |
| chr3_63875987_C_A | chr3:63875987 | -736 | -160 | -1,344 | — |
| chr3_63858197_A_C | chr3:63858197 | 736 | 32 | 1,216 | — |
| chr3_63858128_A_C | chr3:63858128 | -672 | -224 | -1,664 | — |
| chr3_63911858_C_A | chr3:63911858 | -640 | -160 | -3,584 | — |
| chr3_63911854_C_T | chr3:63911854 | 512 | 416 | -3,072 | — |
| chr3_63911871_A_G | chr3:63911871 | 512 | -32 | 1,792 | — |
| chr3_63875902_T_C | chr3:63875902 | -512 | -96 | 1,408 | — |
| chr3_63911874_C_G | chr3:63911874 | -512 | -96 | 1,280 | — |
| chr3_63858199_T_G | chr3:63858199 | -448 | -256 | 1,472 | — |
| chr3_63911853_C_A | chr3:63911853 | -384 | 128 | -2,304 | — |
| chr3_63911879_G_T | chr3:63911879 | -384 | 32 | 1,280 | — |
| chr3_63858195_T_C | chr3:63858195 | 352 | -128 | 1,216 | — |
| chr3_63858216_T_G | chr3:63858216 | 320 | 128 | 1,408 | 1.3e-5 |
| chr3_63911851_T_G | chr3:63911851 | 256 | 512 | 2,816 | — |
| chr3_63911847_G_A | chr3:63911847 | 256 | 64 | 2,048 | 9.2e-5 |
| chr3_63911882_G_T | chr3:63911882 | -256 | 32 | 1,280 | — |
| chr3_63858229_A_G | chr3:63858229 | 256 | 96 | 1,216 | — |
| chr3_63858239_T_G | chr3:63858239 | -160 | 128 | 1,600 | — |
| chr3_63911860_T_A | chr3:63911860 | 128 | 352 | -2,304 | — |
| chr3_63911870_A_C | chr3:63911870 | 128 | 544 | 2,304 | — |
| chr3_63911867_G_A | chr3:63911867 | -128 | 480 | -1,792 | — |
| chr3_63876019_T_C | chr3:63876019 | 128 | -32 | 1,664 | — |
| chr3_63911855_A_C | chr3:63911855 | 128 | -352 | -1,536 | — |
| chr3_63911891_C_T | chr3:63911891 | -128 | -32 | -1,280 | — |
| chr3_63876005_T_G | chr3:63876005 | -96 | -64 | 1,920 | — |
| chr3_63858200_T_G | chr3:63858200 | 64 | -160 | 1,216 | — |
| chr3_63858201_A_G | chr3:63858201 | 64 | 0 | 1,152 | — |
| chr3_63875956_A_C | chr3:63875956 | 64 | 32 | 1,152 | — |
| chr3_63911887_C_T | chr3:63911887 | 0 | -192 | -2,048 | — |
| chr3_63911848_G_T | chr3:63911848 | 0 | -352 | -1,280 | — |
| chr3_63875934_A_G | chr3:63875934 | 0 | 224 | 1,152 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.