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SCARA3

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near SCARA3

chr8:27,533,901..27,776,769, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr8_27566806_A_G	chr8:27566806	0.222	0.448	0.468	<0.001%
chr8_27558906_A_C	chr8:27558906	-0.145	-0.346	-0.447	<0.001%
chr8_27558981_A_G	chr8:27558981	0.141	0.297	0.435	0.0013%
chr8_27558902_G_C	chr8:27558902	-0.149	-0.352	-0.371	0.0085%
chr8_27566268_C_A	chr8:27566268	0.053	0.033	0.359	—
chr8_27558412_A_T	chr8:27558412	0.028	0.044	-0.329	<0.001%
chr8_27566251_A_C	chr8:27566251	0.046	0.115	0.329	—
chr8_27558991_T_G	chr8:27558991	-0.111	-0.207	-0.312	<0.001%
chr8_27566261_T_C	chr8:27566261	-0.042	0.018	-0.312	—
chr8_27558963_C_T	chr8:27558963	-0.092	-0.173	-0.282	<0.001%
chr8_27558164_C_G	chr8:27558164	0.020	0.020	0.271	0.0013%
chr8_27566843_T_C	chr8:27566843	0.112	0.188	0.271	0.0013%
chr8_27558168_A_C	chr8:27558168	-0.018	-0.072	-0.259	<0.001%
chr8_27567035_A_C	chr8:27567035	0.016	0.014	0.247	0.0033%
chr8_27566332_A_T	chr8:27566332	0.037	0.028	0.241	—
chr8_27558868_G_T	chr8:27558868	0.112	0.169	0.235	0.0013%
chr8_27566332_A_C	chr8:27566332	-0.041	-0.030	-0.235	—
chr8_27558865_G_T	chr8:27558865	0.072	0.133	0.229	0.0013%
chr8_27558880_G_T	chr8:27558880	-0.055	-0.138	-0.229	<0.001%
chr8_27566886_G_C	chr8:27566886	0.123	0.255	0.224	<0.001%
chr8_27559201_G_A	chr8:27559201	0.071	0.090	0.212	<0.001%
chr8_27558841_T_C	chr8:27558841	0.062	0.115	0.206	<0.001%
chr8_27558867_G_T	chr8:27558867	0.073	0.110	0.200	<0.001%
chr8_27566253_G_T	chr8:27566253	0.012	0.056	0.200	—
chr8_27558812_C_T	chr8:27558812	0.017	0.030	0.194	<0.001%
chr8_27558392_A_G	chr8:27558392	0.050	0.072	0.188	0.0026%
chr8_27566253_G_C	chr8:27566253	0.010	0.013	0.188	—
chr8_27566300_G_C	chr8:27566300	0.009	0.018	0.188	—
chr8_27566308_A_C	chr8:27566308	-0.032	-0.032	-0.188	—
chr8_27567031_A_C	chr8:27567031	0.007	0.001	0.188	0.0033%
chr8_27566802_A_G	chr8:27566802	0.069	0.137	0.182	0.102%
chr8_27558265_T_C	chr8:27558265	0.057	0.025	0.176	<0.001%
chr8_27558414_G_C	chr8:27558414	0.050	0.029	-0.165	<0.001%
chr8_27558924_C_A	chr8:27558924	-0.048	-0.075	-0.165	<0.001%
chr8_27559204_C_G	chr8:27559204	0.043	0.063	0.165	<0.001%
chr8_27559227_C_A	chr8:27559227	-0.025	-0.028	-0.165	<0.001%
chr8_27558266_G_T	chr8:27558266	-0.017	0.011	-0.159	0.0013%
chr8_27559239_T_C	chr8:27559239	0.038	0.055	0.159	<0.001%
chr8_27567074_A_G	chr8:27567074	0.000	0.005	0.159	0.0026%
chr8_27558933_C_T	chr8:27558933	0.087	0.133	0.124	<0.001%
chr8_27559056_C_T	chr8:27559056	0.068	0.128	0.153	<0.001%
chr8_27566276_G_C	chr8:27566276	-0.013	-0.013	-0.153	—
chr8_27566308_A_G	chr8:27566308	-0.021	-0.034	-0.153	—
chr8_27566820_G_A	chr8:27566820	0.075	0.175	0.150	0.326%
chr8_27566252_G_C	chr8:27566252	0.017	0.014	0.147	—
chr8_27566308_A_T	chr8:27566308	-0.021	-0.016	-0.147	—
chr8_27542159_T_C	chr8:27542159	0.045	0.039	0.141	0.0099%
chr8_27559009_C_A	chr8:27559009	-0.027	-0.058	-0.141	5.01%
chr8_27559022_G_A	chr8:27559022	-0.034	-0.071	-0.141	0.0013%
chr8_27559057_C_G	chr8:27559057	0.044	0.065	0.141	0.0033%
chr8_27566242_A_T	chr8:27566242	-0.013	-0.023	-0.141	—
chr8_27566277_C_G	chr8:27566277	0.005	-0.013	-0.141	—
chr8_27566277_C_T	chr8:27566277	0.011	-0.003	-0.141	—
chr8_27566300_G_A	chr8:27566300	0.017	0.018	0.141	—
chr8_27558829_C_A	chr8:27558829	0.008	0.038	0.135	0.0039%
chr8_27558855_T_C	chr8:27558855	0.037	0.067	0.135	<0.001%
chr8_27559202_G_A	chr8:27559202	0.046	0.065	0.135	0.0039%
chr8_27559580_C_G	chr8:27559580	-0.040	-0.023	-0.135	0.0013%
chr8_27559580_C_T	chr8:27559580	-0.022	-0.018	-0.135	0.036%
chr8_27566254_G_C	chr8:27566254	0.011	0.019	0.135	—
chr8_27566257_T_C	chr8:27566257	-0.024	-0.016	-0.135	—
chr8_27566299_G_C	chr8:27566299	0.005	0.015	0.135	—
chr8_27566915_A_G	chr8:27566915	0.055	0.103	0.135	0.0033%
chr8_27558222_C_A	chr8:27558222	0.073	0.121	0.035	<0.001%
chr8_27558809_C_A	chr8:27558809	0.020	0.044	0.129	0.0013%
chr8_27566239_T_G	chr8:27566239	0.044	0.037	0.129	—
chr8_27566246_T_G	chr8:27566246	0.006	0.032	0.129	—
chr8_27566268_C_G	chr8:27566268	0.016	0.011	0.129	—
chr8_27558366_C_G	chr8:27558366	0.016	0.025	0.124	0.0013%
chr8_27559581_G_A	chr8:27559581	-0.030	-0.022	-0.124	0.0026%
chr8_27566252_G_T	chr8:27566252	0.023	0.018	0.124	—
chr8_27566255_G_A	chr8:27566255	0.010	0.029	0.124	—
chr8_27558924_C_T	chr8:27558924	-0.035	-0.077	-0.118	0.0020%
chr8_27566277_C_A	chr8:27566277	0.009	0.001	-0.118	—
chr8_27566293_T_C	chr8:27566293	0.002	-0.004	0.118	—
chr8_27542138_T_C	chr8:27542138	0.004	-0.018	0.112	0.069%
chr8_27558840_A_T	chr8:27558840	0.037	0.150	0.112	0.013%
chr8_27558849_A_T	chr8:27558849	0.025	0.057	0.112	0.622%
chr8_27559055_C_T	chr8:27559055	0.052	0.079	0.112	0.0026%
chr8_27559123_C_T	chr8:27559123	-0.012	-0.004	-0.112	<0.001%
chr8_27566236_G_T	chr8:27566236	0.027	0.013	0.112	—
chr8_27566251_A_T	chr8:27566251	0.012	0.047	0.112	—
chr8_27566276_G_T	chr8:27566276	0.008	0.000	-0.112	—
chr8_27566866_C_T	chr8:27566866	-0.035	-0.086	-0.112	0.0033%
chr8_27558133_C_G	chr8:27558133	0.062	0.070	0.071	<0.001%
chr8_27542143_A_G	chr8:27542143	0.012	-0.010	0.106	<0.001%
chr8_27558114_A_G	chr8:27558114	0.012	0.024	-0.106	<0.001%
chr8_27559002_A_G	chr8:27559002	-0.011	-0.028	-0.106	<0.001%
chr8_27566261_T_A	chr8:27566261	-0.001	-0.015	-0.106	—
chr8_27566286_A_C	chr8:27566286	0.000	-0.003	0.106	—
chr8_27566298_G_C	chr8:27566298	-0.005	0.004	0.106	—
chr8_27566856_C_G	chr8:27566856	-0.047	-0.132	-0.106	<0.001%
chr8_27558234_G_T	chr8:27558234	-0.013	-0.004	-0.100	<0.001%
chr8_27558294_C_T	chr8:27558294	-0.021	-0.011	-0.100	0.032%
chr8_27558472_G_A	chr8:27558472	-0.031	-0.008	-0.100	0.0026%
chr8_27558800_C_G	chr8:27558800	-0.005	-0.003	0.100	0.0079%
chr8_27566242_A_G	chr8:27566242	-0.003	0.014	0.100	0.181%
chr8_27566276_G_A	chr8:27566276	0.009	0.000	-0.100	0.0020%
chr8_27566326_T_G	chr8:27566326	-0.019	0.004	-0.100	—
chr8_27558195_G_T	chr8:27558195	0.053	0.069	-0.012	<0.001%
chr8_27558394_A_G	chr8:27558394	-0.010	-0.023	0.094	0.0013%
chr8_27558448_T_G	chr8:27558448	0.007	-0.027	0.094	<0.001%
chr8_27558479_G_A	chr8:27558479	-0.010	0.001	-0.094	<0.001%
chr8_27558782_G_A	chr8:27558782	-0.008	-0.011	-0.094	0.0079%
chr8_27558882_T_C	chr8:27558882	-0.048	-0.082	-0.094	<0.001%
chr8_27559297_G_T	chr8:27559297	-0.002	-0.016	-0.094	<0.001%
chr8_27566235_A_C	chr8:27566235	0.003	0.015	0.094	—
chr8_27566251_A_G	chr8:27566251	0.003	-0.022	-0.094	—
chr8_27566254_G_T	chr8:27566254	0.017	0.019	0.094	—
chr8_27566266_G_T	chr8:27566266	-0.003	-0.014	-0.094	—
chr8_27566332_A_G	chr8:27566332	0.018	0.014	0.094	—
chr8_27566803_T_C	chr8:27566803	0.029	0.049	0.094	<0.001%
chr8_27542187_A_G	chr8:27542187	0.016	0.003	0.091	41.5%
chr8_27558280_G_A	chr8:27558280	0.002	-0.011	-0.088	0.0020%
chr8_27558375_G_C	chr8:27558375	-0.036	-0.010	-0.088	0.0020%
chr8_27566250_G_C	chr8:27566250	0.019	0.018	0.088	—
chr8_27566262_C_A	chr8:27566262	0.006	0.000	-0.088	—
chr8_27566279_T_C	chr8:27566279	0.000	-0.018	-0.088	—
chr8_27566280_C_G	chr8:27566280	0.005	0.006	0.088	—
chr8_27566294_G_T	chr8:27566294	0.006	-0.003	-0.088	—
chr8_27566321_T_G	chr8:27566321	0.002	-0.009	0.088	—
chr8_27566369_A_G	chr8:27566369	-0.001	-0.005	0.088	<0.001%
chr8_27559182_G_A	chr8:27559182	0.048	0.048	0.071	<0.001%
chr8_27558242_C_A	chr8:27558242	-0.015	0.016	-0.082	3.92%
chr8_27558371_A_C	chr8:27558371	0.017	0.016	0.082	<0.001%
chr8_27558375_G_T	chr8:27558375	-0.011	0.037	-0.082	<0.001%
chr8_27558772_G_A	chr8:27558772	-0.005	-0.004	-0.082	<0.001%
chr8_27558773_G_A	chr8:27558773	-0.004	-0.011	-0.082	<0.001%
chr8_27559218_G_A	chr8:27559218	0.000	-0.010	-0.082	<0.001%
chr8_27566233_T_G	chr8:27566233	0.003	0.001	-0.082	—
chr8_27566243_A_C	chr8:27566243	0.002	0.024	0.082	—
chr8_27566252_G_A	chr8:27566252	0.010	0.006	0.082	<0.001%
chr8_27566253_G_A	chr8:27566253	0.013	0.010	0.082	—
chr8_27566255_G_C	chr8:27566255	0.009	-0.006	0.082	—
chr8_27566278_C_G	chr8:27566278	0.009	-0.004	-0.082	—
chr8_27566301_T_C	chr8:27566301	-0.001	-0.008	0.082	—
chr8_27566821_C_A	chr8:27566821	-0.041	-0.070	-0.082	<0.001%
chr8_27567045_A_C	chr8:27567045	0.003	-0.008	0.082	0.0013%
chr8_27567098_G_T	chr8:27567098	0.018	0.043	-0.082	<0.001%
chr8_27558178_C_G	chr8:27558178	0.018	0.024	0.076	0.0013%
chr8_27558375_G_A	chr8:27558375	-0.002	0.039	-0.076	0.0033%
chr8_27558382_T_C	chr8:27558382	-0.010	-0.014	0.076	<0.001%
chr8_27558408_G_T	chr8:27558408	-0.022	-0.014	-0.076	2.30%
chr8_27558661_A_G	chr8:27558661	0.011	0.013	0.076	<0.001%
chr8_27558756_G_T	chr8:27558756	-0.007	-0.003	-0.076	0.0020%
chr8_27558809_C_T	chr8:27558809	0.007	0.011	0.076	<0.001%
chr8_27558834_T_C	chr8:27558834	0.042	0.107	0.076	<0.001%
chr8_27558952_G_A	chr8:27558952	0.043	0.070	0.059	<0.001%
chr8_27559130_G_A	chr8:27559130	-0.012	-0.010	-0.076	<0.001%
chr8_27559278_G_A	chr8:27559278	-0.005	-0.013	-0.076	<0.001%
chr8_27566236_G_A	chr8:27566236	-0.012	0.016	-0.076	—
chr8_27566254_G_A	chr8:27566254	0.006	0.019	0.076	2.20%
chr8_27566278_C_A	chr8:27566278	0.019	0.011	-0.076	—
chr8_27566278_C_T	chr8:27566278	0.006	0.004	-0.076	—
chr8_27566288_C_A	chr8:27566288	0.003	0.004	-0.076	—
chr8_27566724_T_G	chr8:27566724	0.015	-0.004	0.076	<0.001%
chr8_27566818_A_G	chr8:27566818	-0.041	-0.104	-0.071	<0.001%
chr8_27558147_C_G	chr8:27558147	-0.002	0.023	0.071	0.0026%
chr8_27558300_C_T	chr8:27558300	-0.014	0.008	-0.071	0.0092%
chr8_27558356_C_G	chr8:27558356	-0.035	-0.008	-0.071	<0.001%
chr8_27558473_G_A	chr8:27558473	-0.001	0.028	-0.071	0.0020%
chr8_27558667_G_A	chr8:27558667	-0.006	-0.004	-0.071	<0.001%
chr8_27558751_C_A	chr8:27558751	0.002	0.001	-0.071	0.0013%
chr8_27559081_C_T	chr8:27559081	-0.001	-0.003	-0.071	0.0033%
chr8_27559109_C_T	chr8:27559109	-0.002	-0.018	-0.071	0.0013%
chr8_27559196_C_T	chr8:27559196	-0.009	-0.038	-0.071	0.204%
chr8_27559204_C_T	chr8:27559204	0.022	0.042	0.071	<0.001%
chr8_27559205_G_A	chr8:27559205	-0.007	0.015	0.071	0.0013%
chr8_27559294_C_G	chr8:27559294	-0.003	0.008	0.071	0.0059%
chr8_27559915_C_A	chr8:27559915	-0.005	-0.009	-0.071	<0.001%
chr8_27566249_G_C	chr8:27566249	0.015	0.016	0.071	—
chr8_27566260_C_T	chr8:27566260	0.012	-0.010	-0.071	—
chr8_27566269_A_C	chr8:27566269	0.002	-0.004	0.071	—
chr8_27566273_T_C	chr8:27566273	-0.004	-0.020	0.071	—
chr8_27566282_C_G	chr8:27566282	0.001	-0.011	-0.071	—
chr8_27566300_G_T	chr8:27566300	0.006	0.010	0.071	—
chr8_27566325_T_C	chr8:27566325	0.016	0.014	0.071	—
chr8_27566340_A_C	chr8:27566340	-0.012	-0.011	-0.071	—
chr8_27541829_C_G	chr8:27541829	-0.011	-0.008	0.068	<0.001%
chr8_27566250_G_T	chr8:27566250	0.037	0.061	-0.006	—
chr8_27541603_A_G	chr8:27541603	0.004	-0.001	0.065	0.0053%
chr8_27558137_T_C	chr8:27558137	-0.018	-0.010	0.065	<0.001%
chr8_27558247_C_G	chr8:27558247	-0.037	-0.060	-0.065	0.0013%
chr8_27558260_G_A	chr8:27558260	0.022	0.018	-0.065	<0.001%
chr8_27558291_G_C	chr8:27558291	0.009	0.006	0.065	0.083%
chr8_27558673_C_G	chr8:27558673	-0.008	-0.005	-0.065	<0.001%
chr8_27558702_C_T	chr8:27558702	-0.019	-0.005	-0.065	<0.001%
chr8_27558781_G_A	chr8:27558781	0.003	0.001	-0.065	0.0013%
chr8_27558964_G_A	chr8:27558964	0.008	-0.009	-0.065	0.0026%
chr8_27559035_A_G	chr8:27559035	0.013	0.023	0.065	<0.001%
chr8_27559229_G_A	chr8:27559229	-0.006	-0.008	-0.065	<0.001%
chr8_27559642_A_G	chr8:27559642	0.004	0.032	0.065	0.015%
chr8_27559665_A_C	chr8:27559665	-0.008	-0.010	-0.065	0.0013%
chr8_27559997_T_C	chr8:27559997	0.002	-0.011	0.065	0.0020%
chr8_27560002_G_C	chr8:27560002	0.004	-0.001	0.065	0.0013%
chr8_27566232_T_C	chr8:27566232	-0.005	-0.011	-0.065	—
chr8_27566243_A_G	chr8:27566243	0.000	0.014	0.065	—
chr8_27566244_T_A	chr8:27566244	-0.011	-0.014	-0.065	—
chr8_27566245_A_G	chr8:27566245	0.002	-0.003	0.065	—
chr8_27566270_G_A	chr8:27566270	0.002	0.000	-0.065	—

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.