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SCGB1C1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SCGB1C1
chr11:93,077..294,575, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr11_207289_T_C | chr11:207289 | 25,280 | 1,856 | 4,608 | — |
| chr11_207387_G_A | chr11:207387 | 15,744 | 2,784 | 13,824 | 2.1e-4 |
| chr11_207270_C_T | chr11:207270 | -13,440 | -544 | -1,536 | — |
| chr11_207270_C_G | chr11:207270 | -13,312 | -1,184 | -6,144 | 6.6e-6 |
| chr11_192243_C_A | chr11:192243 | 12,520 | 2,280 | 13,568 | 2.7e-5 |
| chr11_207379_G_T | chr11:207379 | 11,776 | -32 | -2,048 | — |
| chr11_207268_C_T | chr11:207268 | -11,712 | -384 | -4,096 | 6.6e-6 |
| chr11_207270_C_A | chr11:207270 | -11,328 | -864 | -3,072 | — |
| chr11_207276_C_G | chr11:207276 | -11,200 | -384 | -1,536 | — |
| chr11_207293_C_G | chr11:207293 | 10,880 | 384 | 6,144 | — |
| chr11_207268_C_A | chr11:207268 | -10,688 | -160 | -3,072 | — |
| chr11_207277_C_G | chr11:207277 | -10,624 | -352 | -1,536 | — |
| chr11_207273_C_T | chr11:207273 | -10,560 | 128 | -512 | — |
| chr11_207268_C_G | chr11:207268 | -10,304 | -320 | -2,560 | — |
| chr11_207277_C_A | chr11:207277 | -10,304 | 64 | 1,024 | — |
| chr11_207269_C_T | chr11:207269 | -9,792 | -320 | -3,072 | — |
| chr11_207302_C_A | chr11:207302 | 9,792 | 544 | 9,216 | — |
| chr11_207376_G_A | chr11:207376 | 9,600 | -352 | 512 | — |
| chr11_207302_C_G | chr11:207302 | 9,536 | 32 | 9,216 | — |
| chr11_207313_G_C | chr11:207313 | -9,536 | -992 | -2,560 | — |
| chr11_207276_C_T | chr11:207276 | -9,472 | 32 | 2,560 | — |
| chr11_207271_T_C | chr11:207271 | 9,344 | 160 | 1,024 | — |
| chr11_207245_C_A | chr11:207245 | 9,280 | 2,400 | 9,728 | — |
| chr11_207269_C_G | chr11:207269 | -9,216 | -480 | -4,608 | — |
| chr11_207274_C_T | chr11:207274 | -9,216 | -224 | 0 | — |
| chr11_207317_G_C | chr11:207317 | -9,216 | -672 | -4,096 | — |
| chr11_207301_A_T | chr11:207301 | 9,152 | -32 | 5,632 | — |
| chr11_207261_G_C | chr11:207261 | 9,088 | 1,056 | 2,560 | — |
| chr11_207379_G_C | chr11:207379 | 8,832 | -288 | -3,072 | — |
| chr11_207275_C_A | chr11:207275 | -8,768 | -32 | 3,072 | — |
| chr11_207277_C_T | chr11:207277 | -8,768 | 352 | 0 | — |
| chr11_207320_A_C | chr11:207320 | 8,704 | 960 | 7,680 | — |
| chr11_207381_G_T | chr11:207381 | 8,704 | 1,408 | -2,560 | — |
| chr11_207278_A_G | chr11:207278 | -8,640 | -320 | -5,120 | — |
| chr11_207377_A_G | chr11:207377 | 8,576 | -1,440 | -2,560 | — |
| chr11_207276_C_A | chr11:207276 | -8,384 | 384 | 2,560 | 1.3e-5 |
| chr11_207382_G_C | chr11:207382 | 8,320 | -1,248 | -3,584 | 6.6e-6 |
| chr11_207273_C_A | chr11:207273 | -8,192 | 1,440 | 2,048 | — |
| chr11_207271_T_G | chr11:207271 | -7,744 | -768 | -6,144 | — |
| chr11_207273_C_G | chr11:207273 | -7,744 | -288 | 0 | — |
| chr11_207376_G_C | chr11:207376 | 7,296 | -2,592 | 13,312 | — |
| chr11_207303_C_G | chr11:207303 | 7,296 | -224 | 8,704 | — |
| chr11_207325_G_A | chr11:207325 | -7,296 | 32 | -4,608 | 6.6e-6 |
| chr11_207269_C_A | chr11:207269 | -7,168 | 416 | -1,024 | — |
| chr11_207346_G_C | chr11:207346 | 7,168 | 2,688 | 2,560 | — |
| chr11_207370_G_C | chr11:207370 | -7,168 | -864 | -3,072 | — |
| chr11_207317_G_T | chr11:207317 | -7,104 | -448 | -2,560 | — |
| chr11_207278_A_T | chr11:207278 | -6,912 | 160 | 512 | — |
| chr11_207303_C_T | chr11:207303 | 6,784 | 160 | 8,704 | — |
| chr11_207275_C_T | chr11:207275 | -6,784 | 128 | 2,048 | — |
| chr11_207275_C_G | chr11:207275 | -6,720 | -224 | 2,048 | 2.7e-1 |
| chr11_207331_C_A | chr11:207331 | 6,656 | 1,856 | 5,120 | — |
| chr11_207382_G_T | chr11:207382 | 6,656 | 224 | -512 | — |
| chr11_207202_T_G | chr11:207202 | -6,464 | -2,368 | -8,192 | 1.3e-5 |
| chr11_207287_G_C | chr11:207287 | -6,464 | -576 | -6,656 | — |
| chr11_207299_T_C | chr11:207299 | -6,464 | -1,856 | -3,584 | — |
| chr11_207395_G_C | chr11:207395 | 6,400 | 544 | 1,024 | — |
| chr11_207319_C_T | chr11:207319 | 6,336 | 1,280 | 4,096 | — |
| chr11_207300_C_A | chr11:207300 | 6,208 | 128 | 6,144 | — |
| chr11_207317_G_A | chr11:207317 | -6,144 | -192 | -1,024 | — |
| chr11_207395_G_T | chr11:207395 | 6,144 | 576 | 2,560 | — |
| chr11_207236_C_G | chr11:207236 | -6,080 | -544 | -4,608 | — |
| chr11_207187_T_G | chr11:207187 | 6,016 | 576 | 1,536 | 6.6e-6 |
| chr11_207251_C_G | chr11:207251 | -5,952 | -768 | -3,072 | — |
| chr11_207301_A_G | chr11:207301 | 5,952 | -448 | 3,584 | — |
| chr11_207233_C_G | chr11:207233 | -5,888 | -800 | -6,144 | — |
| chr11_207202_T_A | chr11:207202 | -5,824 | -2,304 | -8,192 | 2.0e-5 |
| chr11_207378_C_G | chr11:207378 | 5,760 | -416 | -1,536 | — |
| chr11_207231_C_A | chr11:207231 | -5,696 | 352 | -2,560 | — |
| chr11_207274_C_G | chr11:207274 | -5,632 | -128 | 2,560 | — |
| chr11_207352_A_C | chr11:207352 | -5,632 | -544 | -4,608 | — |
| chr11_207303_C_A | chr11:207303 | 5,568 | 160 | 8,192 | — |
| chr11_207231_C_G | chr11:207231 | -5,568 | -96 | -4,608 | — |
| chr11_207259_T_C | chr11:207259 | 5,568 | 928 | 1,024 | — |
| chr11_207285_C_G | chr11:207285 | 5,568 | 32 | 2,560 | — |
| chr11_207383_C_T | chr11:207383 | 5,504 | -1,952 | -5,632 | — |
| chr11_207348_G_C | chr11:207348 | -5,504 | 448 | -3,072 | — |
| chr11_207230_A_C | chr11:207230 | -5,440 | -1,024 | -11,776 | — |
| chr11_207295_G_C | chr11:207295 | -5,376 | -768 | -8,192 | — |
| chr11_207388_T_G | chr11:207388 | -5,376 | 1,216 | -5,632 | — |
| chr11_207229_C_T | chr11:207229 | -5,376 | -192 | -3,072 | — |
| chr11_192183_G_A | chr11:192183 | -5,320 | -2,616 | -4,992 | 6.7e-6 |
| chr11_207293_C_A | chr11:207293 | 5,312 | 288 | 8,704 | — |
| chr11_207278_A_C | chr11:207278 | -5,312 | -384 | -4,096 | — |
| chr11_207283_C_G | chr11:207283 | -5,248 | -416 | 0 | 6.6e-6 |
| chr11_207358_G_C | chr11:207358 | 5,248 | 320 | 2,048 | — |
| chr11_207372_C_G | chr11:207372 | -5,248 | 960 | 1,536 | — |
| chr11_207266_G_C | chr11:207266 | 5,184 | -352 | 1,536 | — |
| chr11_207267_G_A | chr11:207267 | -5,184 | -128 | -2,048 | — |
| chr11_207381_G_A | chr11:207381 | 5,120 | -480 | -4,608 | — |
| chr11_207393_G_C | chr11:207393 | 5,120 | 1,024 | 2,560 | — |
| chr11_207302_C_T | chr11:207302 | 5,056 | -768 | 7,168 | — |
| chr11_207272_G_A | chr11:207272 | -5,056 | 96 | -3,072 | — |
| chr11_207272_G_C | chr11:207272 | -4,992 | -544 | -8,192 | — |
| chr11_192188_A_G | chr11:192188 | 4,992 | 608 | 4,544 | 2.7e-5 |
| chr11_207280_C_A | chr11:207280 | -4,992 | 224 | 1,024 | — |
| chr11_207363_C_T | chr11:207363 | 4,992 | 608 | -1,536 | — |
| chr11_207233_C_T | chr11:207233 | 4,864 | 1,504 | 16,896 | — |
| chr11_207300_C_G | chr11:207300 | 4,864 | 896 | 7,168 | — |
| chr11_207385_C_G | chr11:207385 | -4,864 | -2,432 | -6,656 | — |
| chr11_207378_C_T | chr11:207378 | 4,864 | -256 | -4,096 | — |
| chr11_207229_C_A | chr11:207229 | -4,800 | -736 | -5,632 | — |
| chr11_207229_C_G | chr11:207229 | -4,800 | -480 | -4,608 | — |
| chr11_207232_G_A | chr11:207232 | -4,800 | -288 | -3,584 | — |
| chr11_207236_C_A | chr11:207236 | -4,800 | 32 | -3,584 | — |
| chr11_207274_C_A | chr11:207274 | -4,800 | -192 | 512 | — |
| chr11_207369_C_T | chr11:207369 | 4,736 | 672 | 5,632 | — |
| chr11_207308_G_C | chr11:207308 | -4,736 | -672 | -4,096 | — |
| chr11_207228_G_C | chr11:207228 | -4,672 | -384 | -2,048 | — |
| chr11_207232_G_T | chr11:207232 | -4,608 | 288 | -3,584 | — |
| chr11_207378_C_A | chr11:207378 | 4,608 | 192 | -2,560 | — |
| chr11_207321_T_A | chr11:207321 | 4,544 | 288 | 2,560 | — |
| chr11_207325_G_C | chr11:207325 | -4,480 | 0 | -4,096 | — |
| chr11_207375_A_C | chr11:207375 | -4,480 | 352 | 512 | — |
| chr11_207201_G_A | chr11:207201 | -4,352 | -1,408 | -6,656 | 2.0e-5 |
| chr11_207349_G_C | chr11:207349 | 4,352 | -96 | -5,632 | — |
| chr11_207234_G_C | chr11:207234 | -4,352 | -256 | -3,072 | — |
| chr11_207351_C_A | chr11:207351 | -4,352 | 672 | -1,536 | — |
| chr11_207379_G_A | chr11:207379 | 4,352 | 128 | 1,536 | — |
| chr11_207395_G_A | chr11:207395 | 4,352 | -384 | -3,584 | — |
| chr11_207291_T_C | chr11:207291 | -4,288 | -928 | -9,216 | — |
| chr11_207381_G_C | chr11:207381 | 4,224 | -768 | -5,632 | — |
| chr11_207279_A_G | chr11:207279 | -4,224 | 160 | -2,560 | — |
| chr11_207285_C_A | chr11:207285 | 4,224 | 256 | 3,584 | — |
| chr11_207315_C_G | chr11:207315 | 4,224 | 768 | 3,584 | — |
| chr11_207373_T_G | chr11:207373 | -4,224 | -960 | -1,024 | — |
| chr11_192141_C_T | chr11:192141 | -4,208 | -536 | -4,336 | 3.3e-5 |
| chr11_207256_G_A | chr11:207256 | -4,160 | -384 | -5,120 | — |
| chr11_207232_G_C | chr11:207232 | -4,096 | -608 | -9,216 | — |
| chr11_207230_A_T | chr11:207230 | -4,096 | -384 | -7,680 | — |
| chr11_207267_G_C | chr11:207267 | -4,096 | -832 | -5,632 | — |
| chr11_207292_C_T | chr11:207292 | 4,032 | 1,664 | 5,632 | — |
| chr11_207375_A_T | chr11:207375 | -3,968 | 1,568 | 8,704 | — |
| chr11_207360_G_C | chr11:207360 | -3,968 | -32 | -6,656 | — |
| chr11_207393_G_T | chr11:207393 | 3,968 | 288 | 6,656 | — |
| chr11_207312_A_C | chr11:207312 | -3,968 | -928 | -5,632 | — |
| chr11_192200_G_T | chr11:192200 | 3,848 | 696 | 4,224 | 2.0e-5 |
| chr11_207359_C_T | chr11:207359 | -3,840 | -32 | 5,120 | 6.3e-4 |
| chr11_207252_G_T | chr11:207252 | 3,712 | 544 | 5,632 | — |
| chr11_207377_A_C | chr11:207377 | 3,712 | -1,184 | -5,120 | — |
| chr11_192190_G_C | chr11:192190 | -3,632 | -864 | -4,160 | 6.7e-6 |
| chr11_207284_T_C | chr11:207284 | -3,584 | -800 | -7,168 | — |
| chr11_207254_C_G | chr11:207254 | -3,584 | -928 | -4,096 | — |
| chr11_207230_A_G | chr11:207230 | -3,456 | -768 | -10,240 | — |
| chr11_207297_G_A | chr11:207297 | -3,392 | -480 | -4,608 | — |
| chr11_207299_T_A | chr11:207299 | 3,392 | -352 | 4,608 | — |
| chr11_207380_T_C | chr11:207380 | 3,328 | -1,120 | -7,680 | — |
| chr11_207366_A_C | chr11:207366 | -3,328 | 192 | -4,608 | — |
| chr11_207312_A_G | chr11:207312 | -3,200 | -544 | -5,120 | — |
| chr11_207156_G_T | chr11:207156 | -3,136 | -2,816 | -10,496 | 1.1e-3 |
| chr11_189760_G_A | chr11:189760 | -3,096 | -432 | -9,120 | 7.9e-5 |
| chr11_207385_C_A | chr11:207385 | -3,072 | -2,048 | -6,144 | — |
| chr11_207246_A_G | chr11:207246 | -3,072 | -224 | -4,096 | — |
| chr11_189824_T_G | chr11:189824 | -2,944 | -224 | -6,944 | 6.6e-6 |
| chr11_207390_G_A | chr11:207390 | -2,688 | 640 | 8,704 | — |
| chr11_207260_C_G | chr11:207260 | -2,688 | -416 | -5,120 | — |
| chr11_207369_C_G | chr11:207369 | 2,688 | -160 | 4,608 | — |
| chr11_207371_C_A | chr11:207371 | 2,560 | 512 | 4,608 | — |
| chr11_207306_G_T | chr11:207306 | 2,560 | 544 | 4,096 | — |
| chr11_192440_C_G | chr11:192440 | 2,496 | 976 | 4,960 | 1.3e-5 |
| chr11_207253_T_C | chr11:207253 | 2,432 | -512 | -4,608 | — |
| chr11_207260_C_T | chr11:207260 | -2,368 | -384 | -6,144 | — |
| chr11_207295_G_A | chr11:207295 | -2,304 | 480 | 5,120 | — |
| chr11_189767_G_C | chr11:189767 | -2,264 | -512 | -6,304 | 7.8e-3 |
| chr11_207380_T_A | chr11:207380 | 2,176 | -1,632 | -7,680 | — |
| chr11_192411_T_C | chr11:192411 | 2,128 | 440 | 4,384 | 6.6e-6 |
| chr11_190000_G_A | chr11:190000 | -2,064 | -436 | -6,064 | 6.6e-6 |
| chr11_207265_C_A | chr11:207265 | 1,984 | 640 | 6,656 | — |
| chr11_207265_C_T | chr11:207265 | 1,984 | 736 | 6,144 | — |
| chr11_189822_C_G | chr11:189822 | -1,936 | -84 | -4,768 | 6.6e-6 |
| chr11_207329_T_C | chr11:207329 | 1,920 | -736 | -6,656 | 5.7e-5 |
| chr11_189877_G_A | chr11:189877 | -1,856 | -488 | -5,824 | 1.2e-4 |
| chr11_207402_C_A | chr11:207402 | 1,792 | -1,184 | -10,240 | — |
| chr11_207251_C_T | chr11:207251 | 1,792 | 640 | 4,608 | — |
| chr11_207201_G_T | chr11:207201 | -1,664 | -736 | -4,096 | 1.3e-5 |
| chr11_207037_G_A | chr11:207037 | 1,600 | 608 | 4,608 | 6.6e-6 |
| chr11_207355_G_C | chr11:207355 | 1,536 | 32 | 6,656 | — |
| chr11_189813_C_A | chr11:189813 | 1,504 | 372 | 4,224 | 6.6e-6 |
| chr11_207383_C_G | chr11:207383 | -1,408 | -2,304 | -7,680 | — |
| chr11_207148_T_G | chr11:207148 | 1,408 | 832 | 4,096 | 6.6e-6 |
| chr11_207293_C_T | chr11:207293 | 1,344 | 352 | 4,096 | 6.7e-5 |
| chr11_207044_G_T | chr11:207044 | 1,024 | 1,216 | 8,192 | 6.6e-6 |
| chr11_207262_G_C | chr11:207262 | -960 | -544 | -5,120 | — |
| chr11_207049_T_G | chr11:207049 | -960 | -448 | -4,608 | 6.6e-6 |
| chr11_207035_G_C | chr11:207035 | 960 | 480 | 4,352 | 6.6e-6 |
| chr11_207401_G_T | chr11:207401 | -896 | -544 | -5,632 | — |
| chr11_207386_A_C | chr11:207386 | -640 | -1,664 | -6,656 | 1.4e-4 |
| chr11_207298_C_G | chr11:207298 | -576 | -704 | 5,120 | — |
| chr11_207307_A_T | chr11:207307 | 576 | 736 | 4,096 | — |
| chr11_207337_C_G | chr11:207337 | -448 | 608 | 4,608 | — |
| chr11_207330_G_C | chr11:207330 | -384 | -64 | -4,608 | — |
| chr11_207177_C_T | chr11:207177 | 320 | 384 | 4,608 | 3.9e-5 |
| chr11_207298_C_T | chr11:207298 | 256 | -576 | 5,632 | — |
| chr11_207354_C_T | chr11:207354 | 256 | 1,184 | 5,120 | 8.1e-5 |
| chr11_207264_C_T | chr11:207264 | -256 | 416 | 4,096 | — |
| chr11_207040_G_A | chr11:207040 | 192 | 1,088 | 4,608 | 6.6e-6 |
| chr11_207380_T_G | chr11:207380 | -128 | -1,728 | -7,680 | — |
| chr11_207383_C_A | chr11:207383 | 128 | -1,824 | -7,168 | — |
| chr11_207386_A_G | chr11:207386 | -128 | -2,112 | -4,608 | — |
| chr11_207263_C_T | chr11:207263 | -128 | 896 | 4,096 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.