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SCO2
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SCO2
chr22:50,423,567..50,626,439, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr22_50481608_C_T | chr22:50481608 | 0.208 | 0.193 | 1.000 | — |
| chr22_50481613_C_T | chr22:50481613 | 0.106 | 0.186 | 1.000 | — |
| chr22_50481609_C_A | chr22:50481609 | 0.205 | 0.183 | 1.000 | — |
| chr22_50481624_C_T | chr22:50481624 | 0.081 | 0.160 | 1.000 | — |
| chr22_50481623_C_T | chr22:50481623 | 0.094 | 0.161 | 1.000 | — |
| chr22_50481613_C_A | chr22:50481613 | 0.097 | 0.179 | 1.000 | — |
| chr22_50481623_C_A | chr22:50481623 | 0.089 | 0.161 | 1.000 | — |
| chr22_50481624_C_A | chr22:50481624 | 0.092 | 0.173 | 1.000 | — |
| chr22_50481622_C_T | chr22:50481622 | 0.084 | 0.156 | 1.000 | — |
| chr22_50481617_C_A | chr22:50481617 | 0.071 | 0.163 | 1.000 | — |
| chr22_50481614_C_A | chr22:50481614 | 0.083 | 0.161 | 1.000 | — |
| chr22_50481617_C_T | chr22:50481617 | 0.066 | 0.152 | 1.000 | — |
| chr22_50481619_C_T | chr22:50481619 | 0.083 | 0.135 | 1.000 | — |
| chr22_50481615_C_T | chr22:50481615 | 0.077 | 0.160 | 1.000 | — |
| chr22_50481614_C_T | chr22:50481614 | 0.097 | 0.169 | 1.000 | — |
| chr22_50481615_C_A | chr22:50481615 | 0.088 | 0.155 | 1.000 | — |
| chr22_50481618_C_T | chr22:50481618 | 0.065 | 0.131 | 1.000 | — |
| chr22_50481618_C_A | chr22:50481618 | 0.070 | 0.129 | 1.000 | — |
| chr22_50481622_C_A | chr22:50481622 | 0.069 | 0.147 | 1.000 | — |
| chr22_50481608_C_G | chr22:50481608 | 0.206 | 0.145 | 1.000 | — |
| chr22_50481613_C_G | chr22:50481613 | 0.090 | 0.139 | 1.000 | — |
| chr22_50481609_C_T | chr22:50481609 | 0.087 | 0.122 | 1.000 | — |
| chr22_50481621_G_C | chr22:50481621 | -0.089 | -0.130 | -1.000 | — |
| chr22_50481624_C_G | chr22:50481624 | 0.097 | 0.143 | 1.000 | — |
| chr22_50481610_C_T | chr22:50481610 | 0.092 | 0.103 | 1.000 | — |
| chr22_50481619_C_A | chr22:50481619 | 0.051 | 0.116 | 1.000 | — |
| chr22_50481608_C_A | chr22:50481608 | 0.063 | 0.113 | 1.000 | — |
| chr22_50481615_C_G | chr22:50481615 | 0.101 | 0.126 | 1.000 | — |
| chr22_50481609_C_G | chr22:50481609 | 0.163 | 0.123 | 1.000 | — |
| chr22_50481627_T_C | chr22:50481627 | -0.081 | -0.100 | -1.000 | — |
| chr22_50481617_C_G | chr22:50481617 | 0.068 | 0.116 | 0.965 | — |
| chr22_50481616_G_T | chr22:50481616 | 0.042 | 0.098 | 0.959 | — |
| chr22_50481623_C_G | chr22:50481623 | 0.074 | 0.115 | 0.947 | — |
| chr22_50481611_A_C | chr22:50481611 | -0.045 | -0.082 | -0.915 | — |
| chr22_50481622_C_G | chr22:50481622 | 0.081 | 0.115 | 0.912 | — |
| chr22_50481607_C_T | chr22:50481607 | 0.155 | 0.098 | 0.888 | — |
| chr22_50481610_C_G | chr22:50481610 | 0.126 | 0.103 | 0.888 | — |
| chr22_50481614_C_G | chr22:50481614 | 0.044 | 0.106 | 0.871 | — |
| chr22_50481618_C_G | chr22:50481618 | 0.057 | 0.088 | 0.853 | — |
| chr22_50447508_A_C | chr22:50447508 | -0.072 | -0.241 | -0.800 | — |
| chr22_50481619_C_G | chr22:50481619 | 0.061 | 0.089 | 0.782 | — |
| chr22_50447489_C_G | chr22:50447489 | 0.043 | 0.192 | 0.765 | — |
| chr22_50481607_C_A | chr22:50481607 | 0.126 | 0.092 | 0.765 | — |
| chr22_50481628_C_A | chr22:50481628 | 0.042 | 0.080 | 0.759 | — |
| chr22_50447489_C_A | chr22:50447489 | 0.048 | 0.207 | 0.741 | — |
| chr22_50481642_G_T | chr22:50481642 | 0.034 | 0.079 | 0.741 | — |
| chr22_50447503_C_T | chr22:50447503 | 0.058 | 0.197 | 0.729 | — |
| chr22_50447500_C_T | chr22:50447500 | 0.058 | 0.170 | 0.718 | — |
| chr22_50447489_C_T | chr22:50447489 | 0.052 | 0.209 | 0.712 | — |
| chr22_50447501_C_T | chr22:50447501 | 0.047 | 0.165 | 0.688 | — |
| chr22_50481607_C_G | chr22:50481607 | 0.191 | 0.118 | 0.682 | — |
| chr22_50481610_C_A | chr22:50481610 | 0.074 | 0.070 | 0.682 | — |
| chr22_50447500_C_A | chr22:50447500 | 0.052 | 0.165 | 0.676 | — |
| chr22_50447503_C_G | chr22:50447503 | 0.052 | 0.169 | 0.676 | — |
| chr22_50447484_C_G | chr22:50447484 | 0.036 | 0.135 | 0.665 | — |
| chr22_50447488_C_G | chr22:50447488 | 0.034 | 0.145 | 0.653 | — |
| chr22_50447500_C_G | chr22:50447500 | 0.047 | 0.132 | 0.653 | — |
| chr22_50447483_C_G | chr22:50447483 | 0.028 | 0.135 | 0.641 | — |
| chr22_50447503_C_A | chr22:50447503 | 0.051 | 0.169 | 0.641 | — |
| chr22_50447483_C_T | chr22:50447483 | 0.040 | 0.168 | 0.635 | — |
| chr22_50447488_C_T | chr22:50447488 | 0.041 | 0.170 | 0.635 | — |
| chr22_50447483_C_A | chr22:50447483 | 0.036 | 0.165 | 0.629 | — |
| chr22_50447502_C_T | chr22:50447502 | 0.047 | 0.156 | 0.618 | — |
| chr22_50447484_C_T | chr22:50447484 | 0.037 | 0.147 | 0.612 | — |
| chr22_50447488_C_A | chr22:50447488 | 0.042 | 0.165 | 0.600 | — |
| chr22_50447490_C_G | chr22:50447490 | 0.029 | 0.141 | 0.600 | — |
| chr22_50436376_C_G | chr22:50436376 | 0.095 | 0.136 | -0.588 | — |
| chr22_50481626_C_T | chr22:50481626 | 0.038 | 0.057 | 0.576 | — |
| chr22_50447506_C_G | chr22:50447506 | 0.044 | 0.157 | 0.571 | — |
| chr22_50481590_T_G | chr22:50481590 | -0.071 | -0.069 | -0.571 | — |
| chr22_50481606_C_A | chr22:50481606 | 0.164 | 0.074 | 0.571 | — |
| chr22_50481643_G_T | chr22:50481643 | -0.001 | 0.043 | 0.571 | — |
| chr22_50481645_C_A | chr22:50481645 | 0.040 | 0.051 | 0.565 | — |
| chr22_50447502_C_G | chr22:50447502 | 0.033 | 0.105 | 0.553 | — |
| chr22_50447501_C_G | chr22:50447501 | 0.036 | 0.096 | 0.547 | — |
| chr22_50481612_A_T | chr22:50481612 | 0.013 | 0.043 | 0.547 | — |
| chr22_50481616_G_C | chr22:50481616 | 0.012 | 0.095 | 0.541 | — |
| chr22_50481621_G_T | chr22:50481621 | 0.017 | 0.057 | 0.541 | — |
| chr22_50447484_C_A | chr22:50447484 | 0.040 | 0.147 | 0.535 | — |
| chr22_50447507_C_G | chr22:50447507 | 0.042 | 0.143 | 0.529 | — |
| chr22_50447490_C_A | chr22:50447490 | 0.027 | 0.138 | 0.524 | — |
| chr22_50447507_C_A | chr22:50447507 | 0.037 | 0.147 | 0.524 | — |
| chr22_50447507_C_T | chr22:50447507 | 0.040 | 0.147 | 0.524 | — |
| chr22_50481640_C_T | chr22:50481640 | 0.012 | 0.044 | 0.524 | — |
| chr22_50481641_C_T | chr22:50481641 | 0.018 | 0.039 | 0.524 | — |
| chr22_50447490_C_T | chr22:50447490 | 0.032 | 0.151 | 0.518 | — |
| chr22_50447482_C_G | chr22:50447482 | 0.027 | 0.124 | 0.512 | — |
| chr22_50447499_C_T | chr22:50447499 | 0.043 | 0.136 | 0.512 | — |
| chr22_50447506_C_A | chr22:50447506 | 0.034 | 0.160 | 0.512 | — |
| chr22_50447482_C_A | chr22:50447482 | 0.031 | 0.140 | 0.506 | — |
| chr22_50447482_C_T | chr22:50447482 | 0.031 | 0.140 | 0.506 | — |
| chr22_50447502_C_A | chr22:50447502 | 0.041 | 0.113 | 0.488 | — |
| chr22_50481611_A_T | chr22:50481611 | 0.022 | 0.051 | 0.488 | — |
| chr22_50436332_C_T | chr22:50436332 | 0.130 | 0.195 | -0.482 | — |
| chr22_50447505_A_C | chr22:50447505 | -0.042 | -0.110 | -0.482 | — |
| chr22_50481638_C_A | chr22:50481638 | 0.046 | 0.063 | 0.482 | — |
| chr22_50481638_C_T | chr22:50481638 | 0.025 | 0.039 | 0.482 | — |
| chr22_50447499_C_A | chr22:50447499 | 0.038 | 0.113 | 0.476 | — |
| chr22_50481641_C_A | chr22:50481641 | 0.019 | 0.032 | 0.471 | — |
| chr22_50481625_G_C | chr22:50481625 | -0.057 | -0.047 | -0.465 | — |
| chr22_50481644_A_C | chr22:50481644 | -0.017 | -0.058 | -0.459 | — |
| chr22_50481639_C_T | chr22:50481639 | 0.021 | 0.035 | 0.441 | — |
| chr22_50447485_C_G | chr22:50447485 | 0.032 | 0.095 | 0.435 | — |
| chr22_50447487_C_T | chr22:50447487 | 0.035 | 0.119 | 0.435 | — |
| chr22_50447504_C_T | chr22:50447504 | 0.040 | 0.121 | 0.435 | — |
| chr22_50447506_C_T | chr22:50447506 | 0.030 | 0.129 | 0.435 | — |
| chr22_50447499_C_G | chr22:50447499 | 0.030 | 0.098 | 0.429 | — |
| chr22_50447491_C_G | chr22:50447491 | 0.029 | 0.114 | 0.424 | — |
| chr22_50447486_T_C | chr22:50447486 | -0.032 | -0.060 | -0.418 | — |
| chr22_50481620_A_T | chr22:50481620 | 0.013 | 0.044 | 0.418 | — |
| chr22_50447511_T_C | chr22:50447511 | -0.031 | -0.128 | -0.412 | — |
| chr22_50481590_T_C | chr22:50481590 | -0.031 | 0.009 | -0.412 | — |
| chr22_50447501_C_A | chr22:50447501 | 0.027 | 0.058 | 0.406 | — |
| chr22_50447504_C_G | chr22:50447504 | 0.031 | 0.103 | 0.406 | — |
| chr22_50447441_C_A | chr22:50447441 | 0.123 | 0.110 | 0.400 | — |
| chr22_50481634_T_C | chr22:50481634 | -0.002 | -0.029 | -0.400 | — |
| chr22_50447485_C_A | chr22:50447485 | 0.033 | 0.110 | 0.394 | — |
| chr22_50481635_G_T | chr22:50481635 | 0.017 | 0.042 | 0.394 | — |
| chr22_50481640_C_A | chr22:50481640 | -0.009 | 0.016 | 0.394 | — |
| chr22_50481601_C_T | chr22:50481601 | 0.077 | 0.067 | 0.388 | — |
| chr22_50481642_G_A | chr22:50481642 | 0.009 | 0.034 | 0.388 | — |
| chr22_50447485_C_T | chr22:50447485 | 0.031 | 0.105 | 0.376 | — |
| chr22_50447504_C_A | chr22:50447504 | 0.032 | 0.100 | 0.371 | — |
| chr22_50481620_A_C | chr22:50481620 | -0.032 | -0.042 | -0.371 | — |
| chr22_50481629_C_A | chr22:50481629 | 0.012 | 0.037 | 0.365 | — |
| chr22_50481644_A_G | chr22:50481644 | -0.001 | -0.043 | -0.365 | — |
| chr22_50447441_C_G | chr22:50447441 | 0.083 | 0.077 | 0.359 | — |
| chr22_50481594_C_A | chr22:50481594 | 0.032 | 0.042 | 0.359 | — |
| chr22_50481630_G_T | chr22:50481630 | 0.006 | 0.020 | 0.359 | — |
| chr22_50447487_C_G | chr22:50447487 | 0.027 | 0.082 | 0.347 | — |
| chr22_50447498_C_T | chr22:50447498 | 0.027 | 0.090 | 0.347 | — |
| chr22_50481635_G_A | chr22:50481635 | 0.012 | 0.032 | 0.347 | — |
| chr22_50481626_C_A | chr22:50481626 | 0.025 | 0.027 | 0.341 | — |
| chr22_50481633_T_G | chr22:50481633 | -0.006 | -0.024 | -0.341 | — |
| chr22_50447497_T_G | chr22:50447497 | 0.025 | 0.099 | 0.335 | — |
| chr22_50481637_G_T | chr22:50481637 | 0.012 | 0.026 | 0.335 | — |
| chr22_50447440_T_C | chr22:50447440 | 0.090 | 0.058 | 0.324 | — |
| chr22_50436371_C_T | chr22:50436371 | -0.006 | 0.018 | -0.318 | — |
| chr22_50481634_T_G | chr22:50481634 | 0.007 | -0.020 | -0.318 | — |
| chr22_50447491_C_T | chr22:50447491 | 0.027 | 0.093 | 0.312 | — |
| chr22_50447509_C_T | chr22:50447509 | 0.030 | 0.098 | 0.312 | — |
| chr22_50481597_C_G | chr22:50481597 | -0.027 | -0.031 | -0.312 | — |
| chr22_50481636_C_T | chr22:50481636 | 0.005 | 0.018 | 0.312 | — |
| chr22_50481643_G_A | chr22:50481643 | 0.019 | 0.027 | 0.312 | — |
| chr22_50481628_C_G | chr22:50481628 | 0.017 | 0.043 | 0.306 | — |
| chr22_50481637_G_A | chr22:50481637 | 0.012 | 0.030 | 0.306 | — |
| chr22_50447509_C_A | chr22:50447509 | 0.030 | 0.103 | 0.300 | — |
| chr22_50481628_C_T | chr22:50481628 | 0.002 | 0.024 | 0.294 | — |
| chr22_50447509_C_G | chr22:50447509 | 0.034 | 0.098 | 0.288 | — |
| chr22_50447505_A_T | chr22:50447505 | 0.019 | 0.085 | 0.282 | — |
| chr22_50481601_C_A | chr22:50481601 | 0.039 | 0.030 | 0.276 | — |
| chr22_50481630_G_A | chr22:50481630 | 0.001 | 0.022 | 0.276 | — |
| chr22_50447493_T_G | chr22:50447493 | 0.027 | 0.084 | 0.271 | — |
| chr22_50436337_A_G | chr22:50436337 | 0.017 | 0.022 | -0.265 | — |
| chr22_50447481_C_T | chr22:50447481 | 0.030 | 0.093 | 0.265 | — |
| chr22_50447497_T_C | chr22:50447497 | -0.017 | -0.069 | -0.265 | — |
| chr22_50447520_A_C | chr22:50447520 | 0.044 | -0.044 | -0.265 | — |
| chr22_50481634_T_A | chr22:50481634 | 0.037 | 0.024 | 0.265 | — |
| chr22_50447498_C_A | chr22:50447498 | 0.022 | 0.075 | 0.259 | — |
| chr22_50481588_A_C | chr22:50481588 | -0.032 | -0.047 | -0.259 | — |
| chr22_50481595_T_C | chr22:50481595 | -0.017 | -0.015 | -0.259 | — |
| chr22_50436333_T_C | chr22:50436333 | 0.027 | 0.042 | -0.253 | — |
| chr22_50447487_C_A | chr22:50447487 | 0.027 | 0.075 | 0.253 | — |
| chr22_50447491_C_A | chr22:50447491 | 0.022 | 0.069 | 0.253 | — |
| chr22_50447495_A_G | chr22:50447495 | 0.018 | 0.056 | 0.247 | — |
| chr22_50481639_C_A | chr22:50481639 | 0.007 | 0.017 | 0.247 | — |
| chr22_50447498_C_G | chr22:50447498 | 0.017 | 0.058 | 0.241 | — |
| chr22_50481632_C_A | chr22:50481632 | 0.006 | 0.023 | 0.235 | — |
| chr22_50481630_G_C | chr22:50481630 | -0.037 | -0.034 | -0.224 | — |
| chr22_50436360_C_G | chr22:50436360 | 0.018 | 0.019 | -0.218 | — |
| chr22_50447466_A_C | chr22:50447466 | -0.007 | -0.057 | -0.218 | — |
| chr22_50447492_G_C | chr22:50447492 | -0.015 | -0.055 | -0.218 | — |
| chr22_50481633_T_C | chr22:50481633 | 0.007 | -0.015 | -0.218 | — |
| chr22_50436331_T_C | chr22:50436331 | 0.012 | 0.030 | -0.212 | — |
| chr22_50447480_G_T | chr22:50447480 | 0.017 | 0.070 | 0.212 | — |
| chr22_50447481_C_A | chr22:50447481 | 0.022 | 0.082 | 0.212 | — |
| chr22_50481594_C_T | chr22:50481594 | 0.020 | 0.020 | 0.212 | — |
| chr22_50481612_A_C | chr22:50481612 | -0.011 | -0.021 | -0.212 | — |
| chr22_50481631_C_A | chr22:50481631 | 0.004 | 0.027 | 0.212 | — |
| chr22_50436357_T_G | chr22:50436357 | 0.007 | -0.020 | 0.206 | — |
| chr22_50447510_C_A | chr22:50447510 | 0.016 | 0.062 | 0.206 | — |
| chr22_50481636_C_A | chr22:50481636 | -0.005 | 0.010 | 0.206 | — |
| chr22_50481596_C_T | chr22:50481596 | 0.027 | 0.020 | 0.200 | — |
| chr22_50481604_G_T | chr22:50481604 | 0.028 | 0.034 | 0.200 | — |
| chr22_50447481_C_G | chr22:50447481 | 0.017 | 0.051 | 0.194 | — |
| chr22_50481606_C_G | chr22:50481606 | 0.109 | -0.001 | 0.135 | — |
| chr22_50447518_T_C | chr22:50447518 | 0.012 | -0.051 | -0.188 | — |
| chr22_50481593_G_C | chr22:50481593 | -0.049 | -0.030 | -0.188 | — |
| chr22_50481599_G_T | chr22:50481599 | -0.003 | -0.008 | -0.188 | — |
| chr22_50481638_C_G | chr22:50481638 | 0.047 | 0.013 | 0.188 | — |
| chr22_50436337_A_C | chr22:50436337 | 0.014 | 0.020 | -0.182 | — |
| chr22_50481588_A_G | chr22:50481588 | -0.012 | -0.031 | -0.182 | — |
| chr22_50481591_C_G | chr22:50481591 | -0.007 | -0.021 | -0.182 | — |
| chr22_50481605_A_C | chr22:50481605 | 0.031 | -0.010 | -0.182 | — |
| chr22_50481611_A_G | chr22:50481611 | 0.015 | 0.013 | 0.182 | — |
| chr22_50481635_G_C | chr22:50481635 | 0.017 | 0.029 | 0.182 | — |
| chr22_50436363_G_T | chr22:50436363 | -0.002 | 0.009 | -0.176 | — |
| chr22_50481592_C_A | chr22:50481592 | 0.032 | 0.013 | 0.176 | — |
| chr22_50481629_C_T | chr22:50481629 | -0.010 | 0.006 | 0.176 | — |
| chr22_50436357_T_A | chr22:50436357 | 0.008 | -0.009 | 0.165 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.